RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CREB3L2 (Homo sapiens)

Ensembl gene IDs: ENSG00000182158

Ensembl transcript IDs: ENST00000330387.11, ENST00000420629.1, ENST00000452463.5, ENST00000456390.5, ENST00000458726.5, ENST00000468127.1, ENST00000616381.4, ENST00000620715.4

Found 802 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCAGGCGTGGGTTGGGACTCAGGCTGCCCTCTGAGTCACTGCCGTaGCTGCTCGGAGGGGTGGGCGGCAAATGCAGGTGGTCCACTGGG +
Preference number: 1 (lower is better)
Translates to: CRRGLGLRLPSESLP*LLGGVGGKCRWSTG
Trigger: CCCAGTGGACCACCTGCATTTGCCGCCCACCCCTCCGAGCAGTCACGGCAGTGACTCAGAGGGCAGCCTGAGTCCCAACCCACGCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR GCA 90 bp GGCGTGGGTTGGGACTCAGGCTGCCCTCTGAGTCACTGCCGTGACTaGTCGGAGGGGTGGGCGGCAAATGCAGGTGGTCCACTGGGGCTT +
Preference number: 1 (lower is better)
Translates to: GVGWDSGCPLSHCRD*SEGWAANAGGPLGL
Trigger: AAGCCCCAGTGGACCACCTGCATTTGCCGCCCACCCCTCCGAGCAGTCACGGCAGTGACTCAGAGGGCAGCCTGAGTCCCAACCCACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR GCA 90 bp AGGGGTGCAGGCGTGGGTTGGGACTCAGGCTGCCCTCTGAGTCACTaGCGTGACTGCTCGGAGGGGTGGGCGGCAAATGCAGGTGGTCCA +
Preference number: 1 (lower is better)
Translates to: RGAGVGWDSGCPLSH*RDCSEGWAANAGGP
Trigger: TGGACCACCTGCATTTGCCGCCCACCCCTCCGAGCAGTCACGGCAGTGACTCAGAGGGCAGCCTGAGTCCCAACCCACGCCTGCACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR GCA 90 bp TGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTaGGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCAAC +
Preference number: 1 (lower is better)
Translates to: WAEGCCRGCSHQRPQ*EQRRTRVSALPNTN
Trigger: GTTGGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp GAAAGGAAGGGAGGGATGCAGGCTCCCTTCTGCACAGGAGGGGCATaGACCAGGGGGAGATGCTCTCTCACTGCAGGGAAGTCCCAGGCT +
Preference number: 1 (lower is better)
Translates to: ERKGGMQAPFCTGGA*TRGRCSLTAGKSQA
Trigger: AGCCTGGGACTTCCCTGCAGTGAGAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCCCTCCCTTCCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp AGGGCTGCCAGGACTACGGGGGCCCGATCCAGCTTCCACTCACAGTaGGAAGATGAACTTGGCCGCTTTCCAGGCTGGAACCGTCTCCAG +
Preference number: 1 (lower is better)
Translates to: RAARTTGARSSFHSQ*EDELGRFPGWNRLQ
Trigger: CTGGAGACGGTTCCAGCCTGGAAAGCGGCCAAGTTCATCTTCTCACTGTGAGTGGAAGCTGGATCGGGCCCCCGTAGTCCTGGCAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp GAAAAGCCTGATCCCCTCAGGCATTGCACTTGCGGCCTGAGAATATaGACGAGAGCCCTCGCCTGCCAGTGCTGCTGCAGGAGACGAGAC +
Preference number: 1 (lower is better)
Translates to: EKPDPLRHCTCGLRI*TRALACQCCCRRRD
Trigger: GTCTCGTCTCCTGCAGCAGCACTGGCAGGCGAGGGCTCTCGTTCATATTCTCAGGCCGCAAGTGCAATGCCTGAGGGGATCAGGCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp AGGAGATGGACACCTGGGGGACTGCTCCAGCACGAAGGGAAGCGATaGGCATCACACAGCAGGGCCATTGCAGGGGACAGGTGCTGTAAT +
Preference number: 1 (lower is better)
Translates to: RRWTPGGLLQHEGKR*ASHSRAIAGDRCCN
Trigger: ATTACAGCACCTGTCCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCAGTCCCCCAGGTGTCCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp TGTAGGGCTCCTGCAGGGAATGCTGGCTGGGCAGAGCCATCTTGGTaGCAGAAGGATAGGGCCCGTAGCCTTGAAAGAAGCTGCCGAATG +
Preference number: 1 (lower is better)
Translates to: CRAPAGNAGWAEPSW*QKDRARSLERSCRM
Trigger: CATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTATCCTTCTGCCACCAAGATGGCTCTGCCCAGCCAGCATTCCCTGCAGGAGCCCTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR GCA 90 bp GGTGGCAGAAGGATAGGGCCCGTAGCCTTGAAAGAAGCTGCCGAATaGAACGGCAAAGCACAGCACCACAACCATGAGGCAGGTGCCAGT +
Preference number: 1 (lower is better)
Translates to: GGRRIGPVALKEAAE*NGKAQHHNHEAGAS
Trigger: ACTGGCACCTGCCTCATGGTTGTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTATCCTTCTGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR TCA 90 bp CAGGGAGCCCGGGGCCTGAGTGAGGCATTGTGTCATCTCTCGCTCTaGGCTCATCCTAGAGGCAGACACATACATGCTCAAAGGAACTTC +
Preference number: 1 (lower is better)
Translates to: QGARGLSEALCHLSL*AHPRGRHIHAQRNF
Trigger: GAAGTTCCTTTGAGCATGTATGTGTCTGCCTCTAGGATGAGCTCAGAGCGAGAGATGACACAATGCCTCACTCAGGCCCCGGGCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp GGGTGCCCTCCTAGCTCTGAAGGCTCGCAGAAAACTTGGCTAGCTTaGAAGGAGGCATCGATCTCTTCAGTGTGGTTGCTAGCAGGAAGC +
Preference number: 1 (lower is better)
Translates to: GCPPSSEGSQKTWLA*KEASISSVWLLAGS
Trigger: GCTTCCTGCTAGCAACCACACTGAAGAGATCGATGCCTCCTTTCAAGCTAGCCAAGTTTTCTGCGAGCCTTCAGAGCTAGGAGGGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp GGGCCATTGCAGGGGACAGGTGCTGTAATTCCTGCCCAGAGAACTTaGAAGCTTACAGTGTGCTCACAGGAAGGAATCGGCTCAGCTAGT +
Preference number: 1 (lower is better)
Translates to: GPLQGTGAVIPAQRT*KLTVCSQEGIGSAS
Trigger: ACTAGCTGAGCCGATTCCTTCCTGTGAGCACACTGTAAGCTTTCAAGTTCTCTGGGCAGGAATTACAGCACCTGTCCCCTGCAATGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp CTCCAGTTTGGCGCTGACCAGGTGCTGCTGCAGCTCCAAAAGCACTaGCTTCTCCAGGCTGGTCTCATTCGAGATAATGAAATGGGGAAG +
Preference number: 1 (lower is better)
Translates to: LQFGADQVLLQLQKH*LLQAGLIRDNEMGK
Trigger: CTTCCCCATTTCATTATCTCGAATGAGACCAGCCTGGAGAAGTCAGTGCTTTTGGAGCTGCAGCAGCACCTGGTCAGCGCCAAACTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR GCA 90 bp ACCAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTaGCAAATACCAACAGGCATTATGGCATTTTTGTGGCCAGAGTCT +
Preference number: 1 (lower is better)
Translates to: TRDPSASNGGHGSVL*QIPTGIMAFLWPES
Trigger: AGACTCTGGCCACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 90 bp TTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTaGTTTGCCAAATACCAACAGGCATTATGGCATTTTTGTGGCCAG +
Preference number: 1 (lower is better)
Translates to: FTPETPVRATEDTGQ*FAKYQQALWHFCGQ
Trigger: CTGGCCACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 90 bp ACAGAAGATTGGAACAAAAAGATAGGAGATGGACACCTGGGGGACTaGTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: TEDWNKKIGDGHLGD*SSTKGSDEHHTAGP
Trigger: TGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCAGTCCCCCAGGTGTCCATCTCCTATCTTTTTGTTCCAATCTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 90 bp AGGTGCCAGTCTGCGTGCCAGCTAACTTGCAGGTTCGAGAAACCTTaGCCATCACCAAAGTCTGAAGCTTCTGGAGTTGCTGAAGGAGAG +
Preference number: 1 (lower is better)
Translates to: RCQSACQLTCRFEKP*PSPKSEASGVAEGE
Trigger: CTCTCCTTCAGCAACTCCAGAAGCTTCAGACTTTGGTGATGGGCAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGCAGACTGGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR GCA 90 bp TCCTACTCTACGTCTGGGAGCCTTGAAAACCCAGTCTGGTTCAGTTaGAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTA +
Preference number: 1 (lower is better)
Translates to: SYSTSGSLENPVWFS*SRYMGWLILSLLPL
Trigger: TAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAGGCTCCCAGACGTAGAGTAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp TCTAGTGCATCTCTGCCCTCTCCGTGTTGGCAAGGTTGGCATGAATaGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTGGACT +
Preference number: 1 (lower is better)
Translates to: SSASLPSPCWQGWHE*AIIQLGVGCLHFWT
Trigger: AGTCCAGAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTGCCAACACGGAGAGGGCAGAGATGCACTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp CCTCGGCAAGCTAATAAATACTATTTACAACTGGGGAGGAGAAGCTaGGGAGGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAG +
Preference number: 1 (lower is better)
Translates to: PRQANKYYLQLGRRS*GGRTMDVWGTRLWE
Trigger: CTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCCTCCCCAGCTTCTCCTCCCCAGTTGTAAATAGTATTTATTAGCTTGCCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp GAGCACGTTTCCTACTCTACGTCTGGGAGCCTTGAAAACCCAGTCTaGTTCAGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTT +
Preference number: 1 (lower is better)
Translates to: EHVSYSTSGSLENPV*FSCSRYMGWLILSL
Trigger: AAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAGGCTCCCAGACGTAGAGTAGGAAACGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp CCTCTCCGTGTTGGCAAGGTTGGCATGAATGGGCCATTATTCAACTaGGGGTGGGATGTCTCCATTTCTGGACTGTGCTCAAATTCACAC +
Preference number: 1 (lower is better)
Translates to: PLRVGKVGMNGPLFN*GWDVSISGLCSNSH
Trigger: GTGTGAATTTGAGCACAGTCCAGAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTGCCAACACGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp TTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTaGCAGTTTAAAAGAGAGGGATGGGTCAGTGGAGGCCCATGGTTA +
Preference number: 1 (lower is better)
Translates to: LPSLGPIGCLCLIMT*QFKREGWVSGGPWL
Trigger: TAACCATGGGCCTCCACTGACCCATCCCTCTCTTTTAAACTGTCAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp TCCTCATTTAGAAGAGCACGTTTCCTACTCTACGTCTGGGAGCCTTaGAAACCCAGTCTGGTTCAGTTGCAGCAGGTACATGGGTTGGCT +
Preference number: 1 (lower is better)
Translates to: SSFRRARFLLYVWEP*KPSLVQLQQVHGLA
Trigger: AGCCAACCCATGTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAGGCTCCCAGACGTAGAGTAGGAAACGTGCTCTTCTAAATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp AGCATGTGTCTATGGATAGTCTCACCTGAAGGTGGCCAAATAAAATaGCTCTCAAGAGGGCACTACCTGCCCATGGCTTCACAGGTCCAG +
Preference number: 1 (lower is better)
Translates to: SMCLWIVSPEGGQIK*LSRGHYLPMASQVQ
Trigger: CTGGACCTGTGAAGCCATGGGCAGGTAGTGCCCTCTTGAGAGTCATTTTATTTGGCCACCTTCAGGTGAGACTATCCATAGACACATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 90 bp AGAATGGATCAGGGAACACAGTCTAGAACAGCAGTTTGCAAACTGTaGTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAG +
Preference number: 1 (lower is better)
Translates to: RMDQGTQSRTAVCKL*SVKLWRIPSDAAVQ
Trigger: CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCAAACTGCTGTTCTAGACTGTGTTCCCTGATCCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
3UTR CCA 90 bp GGGTCAGTGCTTTGCCAAATACCAACAGGCATTATGGCATTTTTGTaGCCAGAGTCTGGGGTCTTGACTGAACAAGAGCCATCTCGTCTC +
Preference number: 1 (lower is better)
Translates to: GSVLCQIPTGIMAFL*PESGVLTEQEPSRL
Trigger: GAGACGAGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTGGCCACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCACTGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp TTGCTAGCAGGAAGCCTCGGCAAGCTAATAAATACTATTTACAACTaGGGAGGAGAAGCTGGGGAGGCAGAACTATGGATGTGTGGGGAA +
Preference number: 1 (lower is better)
Translates to: LLAGSLGKLINTIYN*GGEAGEAELWMCGE
Trigger: TTCCCCACACATCCATAGTTCTGCCTCCCCAGCTTCTCCTCCCCAGTTGTAAATAGTATTTATTAGCTTGCCGAGGCTTCCTGCTAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp CATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTaGACTGTGCTCAAATTCACACCTTGTATGACATGTGGGCAGAGG +
Preference number: 1 (lower is better)
Translates to: HEWAIIQLGVGCLHF*TVLKFTPCMTCGQR
Trigger: CCTCTGCCCACATGTCATACAAGGTGTGAATTTGAGCACAGTCCAGAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp CGTGTTGGCAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTaGGATGTCTCCATTTCTGGACTGTGCTCAAATTCACACCTTGTA +
Preference number: 1 (lower is better)
Translates to: RVGKVGMNGPLFNWG*DVSISGLCSNSHLV
Trigger: TACAAGGTGTGAATTTGAGCACAGTCCAGAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTGCCAACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp AAGAGCAGTGATGTTGGTTCTTGGAGCCCCCTTAAAAGGGCCATCTaGGCTCTCTGCCTAACGTCCCATTGTCTACATAGATTCCGTTTT +
Preference number: 1 (lower is better)
Translates to: KSSDVGSWSPLKRAI*ALCLTSHCLHRFRF
Trigger: AAAACGGAATCTATGTAGACAATGGGACGTTAGGCAGAGAGCTCAGATGGCCCTTTTAAGGGGGCTCCAAGAACCAACATCACTGCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp AGCCTTGAAAACCCAGTCTGGTTCAGTTGCAGCAGGTACATGGGTTaGCTCATTCTCTCACTTCTGCCCCTAAATTTGAAACCTTTCCTT +
Preference number: 1 (lower is better)
Translates to: SLENPVWFSCSRYMG*LILSLLPLNLKPFL
Trigger: AAGGAAAGGTTTCAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp GGATTAGGTTGTATCTCTTTGGGCGAGCTGCAAAGTAGCCAAACCTaGCTACCAAAGGTAAGAATGTGGATACACAAATGTCACCTACCC +
Preference number: 1 (lower is better)
Translates to: GLGCISLGELQSSQT*LPKVRMWIHKCHLP
Trigger: GGGTAGGTGACATTTGTGTATCCACATTCTTACCTTTGGTAGTCAGGTTTGGCTACTTTGCAGCTCGCCCAAAGAGATACAACCTAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 90 bp AGAGTTAAGGGAAAGGGAGGGGGTGCAGGCAGCCTCTTTAGAAAGTaGTGTTCACTCTTCTGTCGAGTTCTACAACTTTTAGTGTTTCAT +
Preference number: 1 (lower is better)
Translates to: RVKGKGGGAGSLFRK*CSLFCRVLQLLVFH
Trigger: ATGAAACACTAAAAGTTGTAGAACTCGACAGAAGAGTGAACACCACTTTCTAAAGAGGCTGCCTGCACCCCCTCCCTTTCCCTTAACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR TCA 90 bp CCAAATGGGCCTAGACAGACAAGGCAGGGACCGACTTATGAGGTATaGCGACAAATGTTAATAACATCAAATCCTGTACCTGATATGGAA +
Preference number: 1 (lower is better)
Translates to: PNGPRQTRQGPTYEV*RQMLITSNPVPDME
Trigger: TTCCATATCAGGTACAGGATTTGATGTTATTAACATTTGTCGTCATACCTCATAAGTCGGTCCCTGCCTTGTCTGTCTAGGCCCATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp CCCCTAAATTTGAAACCTTTCCTTCCTCATTGCCCAAATGCTACTTaGGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGC +
Preference number: 1 (lower is better)
Translates to: PLNLKPFLPHCPNAT*VNLIFLPSLGPIGC
Trigger: GCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTTGGGCAATGAGGAAGGAAAGGTTTCAAATTTAGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 90 bp CAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTaGGCTAGACTCCAGAGTCCTCACACTTCACAGAAATTCTTTCTT +
Preference number: 1 (lower is better)
Translates to: QPSSAVGFLYNTLFM*ARLQSPHTSQKFFL
Trigger: AAGAAAGAATTTCTGTGAAGTGTGAGGACTCTGGAGTCTAGCTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTGACTGCTCGGAGGGGTaGGCGGCAAATGCAGGTGGT +
Preference number: 2 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVDCSEG*AANAGG
Trigger: ACCACCTGCATTTGCCGCCCACCCCTCCGAGCAGTC...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGAGCCTGCCAGTGCTGCTaGAGGAGACGAGACGATCCA +
Preference number: 2 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRACQCC*RRRDDP
Trigger: TGGATCGTCTCGTCTCCTGCAGCAGCACTGGCAGGC...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCTCTGAGTCACTGCCGTaGCTGCTCGGAGGGGTGGGC +
Preference number: 2 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALSESLP*LLGGVG
Trigger: GCCCACCCCTCCGAGCAGTCACGGCAGTGACTCAGA...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR TCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGCAGGACCAGAGGGCCTaGTCCCTGCAGTTTATGAGG +
Preference number: 2 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRQDQRA*SLQFMR
Trigger: CCTCATAAACTGCAGGGATCAGGCCCTCTGGTCCTG...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGTGGACCAGGGGGAGATaGTCTCTCACTGCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRWTRGR*SLTAGK
Trigger: CTTCCCTGCAGTGAGAGAGCATCTCCCCCTGGTCCA...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCTGCCCTCTGAGTCACTaGCGTGACTGCTCGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALCPLSH*RDCSEG
Trigger: CCCCTCCGAGCAGTCACGGCAGTGACTCAGAGGGCA...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR TCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGAGTCTGGGGTCTTGACTaGACAAGAGCCATCTCGTCT +
Preference number: 2 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRVWGLD*TRAISS
Trigger: AGACGAGATGGCTCTTGTTCAGTCAAGACCCCAGAC...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGGAAGGGGTGCAGGCGTaGGTTGGGACTCAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGEGVQA*VGTQAA
Trigger: GGCAGCCTGAGTCCCAACCCACGCCTGCACCCCTTC...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGCACGGGTCAGTGCTTTaGCAAATACCAACAGGCATT +
Preference number: 2 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQHGSVL*QIPTGI
Trigger: AATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTG...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGACGAGAGCCCTCGCCTaGCAGTGCTGCTGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGTRALA*QCCCRR
Trigger: TCTCCTGCAGCAGCACTGGCAGGCGAGGGCTCTCGT...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGACTAAAAGCGACAAGATaGGGCAGGTTTGCCTGGAGT +
Preference number: 2 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRLKATR*GRFAWS
Trigger: ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAG...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATCGATCTCTTCAGTGTaGTTGCTAGCAGGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRSISSV*LLAGSL
Trigger: GAGGCTTCCTGCTAGCAACCACACTGAAGAGATCGA...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGCCCACCCTGCTTTGTTaGGGTAGGGGACGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGPTLLC*GRGRGG
Trigger: TCCTCCTCGTCCCCTACCTCAACAAAGCAGGGTGGG...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGCCAGCCCTGACACCCTaGGCAGGGAGGAACCTCTAT +
Preference number: 2 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGPALTP*AGRNLY
Trigger: ATAGAGGTTCCTCCCTGCTCAGGGTGTCAGGGCTGG...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGCACGGGTCAGTGCTTTaGCAAATACCAACAGGCATT +
Preference number: 2 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRHGSVL*QIPTGI
Trigger: AATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTG...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTGAGTGGGCGGAGGGCTaGTGTCGGGGGTGTTCACAC +
Preference number: 2 (lower is better)
Translates to: CTAQTVSALANGRDNKNPEWAEG*CRGCSH
Trigger: GTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTC...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGAAAAACTTGGCTAGCTTaGAAGGAGGCATCGATCTCT +
Preference number: 2 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRKTWLA*KEASIS
Trigger: AGAGATCGATGCCTCCTTTCAAGCTAGCCAAGTTTT...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTAGGGAGCCCGGGGCCTaGGTGAGGCATTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: CTAQTVSALANGRDNKNPREPGA*VRHCVI
Trigger: GATGACACAATGCCTCACTCAGGCCCCGGGCTCCCT...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCCTCGCCTGCCAGTGCTaGTGCAGGAGACGAGACGAT +
Preference number: 2 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTLACQC*CRRRDD
Trigger: ATCGTCTCGTCTCCTGCAGCAGCACTGGCAGGCGAG...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGGGTTGGGACTCAGGCTaGCCTCTGAGTCACTGCCGT +
Preference number: 2 (lower is better)
Translates to: STGSNNNADDVCGGGWWGGWDSG*PLSHCR
Trigger: ACGGCAGTGACTCAGAGGGCAGCCTGAGTCCCAACC...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
59% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTTGCACAGGAGGGGCATaGACCAGGGGGAGATGCTCT +
Preference number: 2 (lower is better)
Translates to: CTAQTVSALANGRDNKNPCTGGA*TRGRCS
Trigger: AGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCA...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTGGCCGCTTTCCAGGCTaGAACCGTCTCCAGCATAGC +
Preference number: 2 (lower is better)
Translates to: CTAQTVSALANGRDNKNPGRFPG*NRLQHS
Trigger: GCTATGCTGGAGACGGTTCCAGCCTGGAAAGCGGCC...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGCACCAGAGACCCCAGTaGGAGCAACGGAGGACACGG +
Preference number: 2 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWHQRPQ*EQRRTR
Trigger: CCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTG...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTGAGTGGGCGGAGGGCTaGTGTCGGGGGTGTTCACAC +
Preference number: 2 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSEWAEG*CRGCSH
Trigger: GTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTC...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGAGCCCGGGGCCTGAGTaGGGCATTGTGTCATCTCTC +
Preference number: 2 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWSPGPE*GIVSSL
Trigger: GAGAGATGACACAATGCCTCACTCAGGCCCCGGGCT...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGGCAGGCTGAAGGGGTaGAGGCGTGGGTTGGGACTC +
Preference number: 2 (lower is better)
Translates to: EKERQRERGRERSQNQRHGRLKG*RRGLGL
Trigger: GAGTCCCAACCCACGCCTGCACCCCTTCAGCCTGCC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR TCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTTGGAGTAGAAAAGCCTaGTCCCCTCAGGCATTGCAC +
Preference number: 2 (lower is better)
Translates to: CTAQTVSALANGRDNKNPWSRKA*SPQALH
Trigger: GTGCAATGCCTGAGGGGATCAGGCTTTTCTACTCCA...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGAGTCACTGCCGTGACTaGTCGGAGGGGTGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLSHCRD*SEGWAA
Trigger: TGCCGCCCACCCCTCCGAGCAGTCACGGCAGTGACT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGGCAGGTGCCAGTCTaGGTGCCAGCTAACTTGCAG +
Preference number: 2 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATRQVPV*VPANLQ
Trigger: CTGCAAGTTAGCTGGCACGCAGACTGGCACCTGCCT...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGATCCTGTACCTGATATaGAATGGAAGCCAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGILYLI*NGSQGV
Trigger: CACACCCTGGCTTCCATTCCATATCAGGTACAGGAT...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 90 bp CACCAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTaGCCAAATACCAACAGGCATTATGGCATTTTTGTGGCCAGAGTC +
Preference number: 2 (lower is better)
Translates to: HQRPQCEQRRTRVSA*PNTNRHYGIFVARV
Trigger: GACTCTGGCCACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCAGCCCGGGGCCTGAGTaGGGCATTGTGTCATCTCTC +
Preference number: 2 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFSPGPE*GIVSSL
Trigger: GAGAGATGACACAATGCCTCACTCAGGCCCCGGGCT...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGAGGGAGCCCGGGGCCTaGGTGAGGCATTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLREPGA*VRHCVI
Trigger: GATGACACAATGCCTCACTCAGGCCCCGGGCTCCCT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTCAAAGTCGAGGGCTGTaGAAAGAACCACGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSQSRGL*KEPRWG
Trigger: CCCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTG...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTTGGACCAGGGGGAGATaGTCTCTCACTGCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSWTRGR*SLTAGK
Trigger: CTTCCCTGCAGTGAGAGAGCATCTCCCCCTGGTCCA...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGTCCGTTTTGGAAGGATaGTTTCCCAGAGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGSVLEG*FPRERV
Trigger: GACTCTTTCTCTGGGAAACCATCCTTCCAAAACGGA...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTATGCAGGCTCCCTTCTaGACAGGAGGGGCATGGACC +
Preference number: 2 (lower is better)
Translates to: EGETEREREREKPKPKAFMQAPF*TGGAWT
Trigger: GGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCAT...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCAATACTATTTACAACTaGGGAGGAGAAGCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTNTIYN*GGEAGE
Trigger: CTCCCCAGCTTCTCCTCCCCAGTTGTAAATAGTATT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTGTACCTGATATGGAATaGAAGCCAGGGTGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSVPDME*KPGCGL
Trigger: AAGCCCACACCCTGGCTTCCATTCCATATCAGGTAC...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGGGCCGCTTTCCAGGCTaGAACCGTCTCCAGCATAGC +
Preference number: 2 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGGRFPG*NRLQHS
Trigger: GCTATGCTGGAGACGGTTCCAGCCTGGAAAGCGGCC...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTTGGAGTAGAAAAGCCTaGTCCCCTCAGGCATTGCAC +
Preference number: 2 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSWSRKA*SPQALH
Trigger: GTGCAATGCCTGAGGGGATCAGGCTTTTCTACTCCA...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACAGAGGACACGGGTCAGTaGTTTGCCAAATACCAACAG +
Preference number: 2 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATEDTGQ*FAKYQQ
Trigger: CTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTC...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGCTCGCCTGCCAGTGCTaGTGCAGGAGACGAGACGAT +
Preference number: 2 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLLACQC*CRRRDD
Trigger: ATCGTCTCGTCTCCTGCAGCAGCACTGGCAGGCGAG...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGATATCCCTTTTTAAGTaGAAAGTCGAGGGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGISLFK*KVEGCE
Trigger: TTCACAGCCCTCGACTTTGCACTTAAAAAGGGATAT...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGTTGCAGCAGGTACATaGGTTGGCTCATTCTCTCAC +
Preference number: 2 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWVAAGT*VGSFSH
Trigger: GTGAGAGAATGAGCCAACCCATGTACCTGCTGCAAC...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTCCAGAGAAAGAGTCCTaGTGTTTGGAGGTCGAGAGA +
Preference number: 2 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSPEKES*CLEVER
Trigger: TCTCTCGACCTCCAAACAGCAGGACTCTTTCTCTGG...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCGGGGTGGGCGGCAAATaGAGGTGGTCCACTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGGVGGK*RWSTGA
Trigger: AGCCCCAGTGGACCACCTGCATTTGCCGCCCACCCC...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp ACAACTTTTAGTGTTTCATTCCCCTCCAGTTTGGCGCTGACCAGGTGCTGCTGCAGCCTTGAAAGAAGCTaGCGAATGCAACGGCAAAGC +
Preference number: 2 (lower is better)
Translates to: TTFSVSFPSSLALTRCCCSLERS*RMQRQS
Trigger: GCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCT...GCAGCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGAAACACTAAAAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGATGACAAAGGTGGTTTaGGGATGTAAAAGTAGAGTT +
Preference number: 2 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGMTKVV*GCKSRV
Trigger: AACTCTACTTTTACATCCCCAAACCACCTTTGTCAT...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTTCCCAGGGGGCAGAGTaGGCGGAGGGCTGCTGTCGG +
Preference number: 2 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTSQGAE*AEGCCR
Trigger: CCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGA...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGCTGGGCTGCAGACAGTaGAGCAGAGAGAAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLLGCRQ*SREKQK
Trigger: CTTCTGCTTCTCTCTGCTCCACTGTCTGCAGCCCAG...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGAGGCCCAACAGGATCTaGGCTGCAGACAGTGGAGCA +
Preference number: 2 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLRPNRI*AADSGA
Trigger: TGCTCCACTGTCTGCAGCCCAGATCCTGTTGGGCCT...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCAGCCGAGCCCGGGCTaGATGACTCCTCTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLQPSPG*MTPLGE
Trigger: CTCCCCCAGAGGAGTCATCCAGCCCGGGCTCGGCTG...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR CAA 90 bp CACGGGTCAGTGCTTTGCCAAATACCAACAGGCATTATGGCATTTTaGTGGCCAGAGTCTGGGGTCTTGACTGAACAAGAGCCATCTCGT +
Preference number: 2 (lower is better)
Translates to: HGSVLCQIPTGIMAF*WPESGVLTEQEPSR
Trigger: ACGAGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTGGCCACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGTGTCATCTCTCGCTCTaGGCTCATCCTAGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGCHLSL*AHPRGR
Trigger: TCTGCCTCTAGGATGAGCTCAGAGCGAGAGATGACA...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGAGCTTCCACTCACAGTaGGAAGATGAACTTGGCCGC +
Preference number: 2 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGSFHSQ*EDELGR
Trigger: GCGGCCAAGTTCATCTTCTCACTGTGAGTGGAAGCT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGTATCTAAAAGAGCAGTaGTGTTGGTTCTTGGAGCCC +
Preference number: 2 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWYLKEQ*CWFLEP
Trigger: GGGCTCCAAGAACCAACATCACTGCTCTTTTAGATA...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGAAGCCACTAATGCTTaGCCATGTCTCCATGAAGAT +
Preference number: 2 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWEATNA*PCLHED
Trigger: ATCTTCATGGAGACATGGGCAAGCATTAGTGGCTTC...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATACGAGAGCCCTCGCCTaGCAGTGCTGCTGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNTRALA*QCCCRR
Trigger: TCTCCTGCAGCAGCACTGGCAGGCGAGGGCTCTCGT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTTGGGCCCTATAGGCTaGCTATGCCTGATAATGACC +
Preference number: 2 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLGPIG*LCLIMT
Trigger: GGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAA...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACAATTATGGCATTTTTGTaGCCAGAGTCTGGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATIMAFL*PESGVL
Trigger: CAAGACCCCAGACTCTGGCCACAAAAATGCCATAAT...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGTCCGTTTTGGAAGGATaGTTTCCCAGAGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWSVLEG*FPRERV
Trigger: GACTCTTTCTCTGGGAAACCATCCTTCCAAAACGGA...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGGCGGCAAATGCAGGTaGTCCACTGGGGCTTCTTTA +
Preference number: 2 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNGGKCR*STGASL
Trigger: TAAAGAAGCCCCAGTGGACCACCTGCATTTGCCGCC...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCGATCCACATCCGGCCTaGACTCCAGCCCTGACACCC +
Preference number: 2 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGDPHPA*TPALTP
Trigger: GGGTGTCAGGGCTGGAGTCCAGGCCGGATGTGGATC...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR TCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATCCCACCCTGCTTTGTTaGGGTAGGGGACGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNPTLLC*GRGRGG
Trigger: TCCTCCTCGTCCCCTACCTCAACAAAGCAGGGTGGG...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTTTTCTCCTACTTTCCTaGGCAGAAATCTTATTCTTG +
Preference number: 2 (lower is better)
Translates to: CTAQTVSALANGRDNKNPFLLLS*AEILFL
Trigger: CAAGAATAAGATTTCTGCTCAGGAAAGTAGGAGAAA...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR TCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTCGAGCCCGGGCTGGATaGCTCCTCTGGGGGAGAATG +
Preference number: 2 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTRARAG*LLWGRM
Trigger: CATTCTCCCCCAGAGGAGTCATCCAGCCCGGGCTCG...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCGCCCTCGCCTGCCAGTaGTGCTGCAGGAGACGAGAC +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPALACQ*CCRRRD
Trigger: GTCTCGTCTCCTGCAGCAGCACTGGCAGGCGAGGGC...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGTCTCTTTGGGCGAGCTaGAAAGTAGCCAAACCTGAC +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLSLWAS*KVAKPD
Trigger: GTCAGGTTTGGCTACTTTGCAGCTCGCCCAAAGAGA...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCTCCAGACAACAGGGCTaGCAGGACTACGGGGGCCCG +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPSRQQG*QDYGGP
Trigger: CGGGCCCCCGTAGTCCTGGCAGCCCTGTTGTCTGGA...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGTTGGGCCCTATAGGCTaGCTATGCCTGATAATGACC +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLLGPIG*LCLIMT
Trigger: GGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAA...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCAGGGGAACCCCCACTTaGCTCTTCAAAGGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLRGTPT*LFKGRS
Trigger: GCTTCTCCCTTTGAAGAGGCAAGTGGGGGTTCCCCT...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456390.5
3UTR-3UTR CCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGAGAACTATGGATGTGTaGGGAACCAGGTTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGRTMDV*GTRLWE
Trigger: CTCCCACAACCTGGTTCCCCACACATCCATAGTTCT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp ACAACTTTTAGTGTTTCATTCCCCTCCAGTTTGGCGCTGACCAGGTGCTGCTGCAATACTATTTACAACTaGGGAGGAGAAGCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: TTFSVSFPSSLALTRCCCNTIYN*GGEAGE
Trigger: CTCCCCAGCTTCTCCTCCCCAGTTGTAAATAGTATT...GCAGCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGAAACACTAAAAGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGAAACAAAACATTGTCTaGAAAGACACGGGATCCCAG +
Preference number: 2 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWKQNIV*KDTGSQ
Trigger: CTGGGATCCCGTGTCTTTCCAGACAATGTTTTGTTT...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCAAACTAAAAGTAGGTTaGGGATTAGGTTGTATCTCT +
Preference number: 2 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTKLKVG*GLGCIS
Trigger: AGAGATACAACCTAATCCCCAACCTACTTTTAGTTT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGTTTAAAAGAGAGGGATaGGTCAGTGGAGGCCCATGG +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLFKREG*VSGGPW
Trigger: CCATGGGCCTCCACTGACCCATCCCTCTCTTTTAAA...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGGTTGCAGCAGGTACATaGGTTGGCTCATTCTCTCAC +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLVAAGT*VGSFSH
Trigger: GTGAGAGAATGAGCCAACCCATGTACCTGCTGCAAC...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTATGCGGCCTGAGAATATaGACGAGAGCCCTCGCCTGC +
Preference number: 2 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLCGLRI*TRALAC
Trigger: GCAGGCGAGGGCTCTCGTTCATATTCTCAGGCCGCA...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATCTGGAGAATTCCCAGTaGTGCCGCAGTCCAGTGGAT +
Preference number: 2 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHLENSQ*CRSPVD
Trigger: ATCCACTGGACTGCGGCATCACTGGGAATTCTCCAG...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
3UTR-3UTR GCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGAAGCCACTAATGCTTaGCCATGTCTCCATGAAGAT +
Preference number: 2 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNAEATNA*PCLHED
Trigger: ATCTTCATGGAGACATGGGCAAGCATTAGTGGCTTC...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGATAGAAAAAGCTTGTaGCCAGGGAGCCCGGGGCCT +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNDRKSL*PGSPGP
Trigger: AGGCCCCGGGCTCCCTGGCCACAAGCTTTTTCTATC...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCGATAGAAAAAGCTTGTaGCCAGGGAGCCCGGGGCCT +
Preference number: 2 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGDRKSL*PGSPGP
Trigger: AGGCCCCGGGCTCCCTGGCCACAAGCTTTTTCTATC...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGAGCAGGTACATGGGTTaGCTCATTCTCTCACTTCTG +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLSRYMG*LILSLL
Trigger: CAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTGGAAAACAAATCCACTaGTATTCTGGTCTTAATCCC +
Preference number: 2 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSGKQIH*YSGLNP
Trigger: GGGATTAAGACCAGAATATCAGTGGATTTGTTTTCC...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGAACACTCTCTTTATGTaGGCTAGACTCCAGAGTCCT +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLNTLFM*ARLQSP
Trigger: AGGACTCTGGAGTCTAGCTCACATAAAGAGAGTGTT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCCGCTTTTGCTGGGTCTaGGGACATGGGAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPRFCWV*GHGREE
Trigger: CTCCTCCCTCCCATGTCCTCAGACCCAGCAAAAGCG...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGATTATGGCATTTTTGTaGCCAGAGTCTGGGGTCTTG +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLIMAFL*PESGVL
Trigger: CAAGACCCCAGACTCTGGCCACAAAAATGCCATAAT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCGTCTGGGGTCTTGACTaGACAAGAGCCATCTCGTCT +
Preference number: 2 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGVWGLD*TRAISS
Trigger: AGACGAGATGGCTCTTGTTCAGTCAAGACCCCAGAC...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATCAGAGTCTGGGGTCTTaGCTGAACAAGAGCCATCTC +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNQSLGS*LNKSHL
Trigger: GAGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTG...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCAAAGTCGAGGGCTGTaGAAAGAACCACGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPQSRGL*KEPRWG
Trigger: CCCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTATCACCTACCCCACCCTaGTTTGTTGAGGTAGGGGAC +
Preference number: 2 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLSPTPP*FVEVGD
Trigger: GTCCCCTACCTCAACAAAGCAGGGTGGGGTAGGTGA...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTTGGAACCAATCTGGTaGTATACAACTCTTCTGTGT +
Preference number: 2 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLEPIW*YTTLLC
Trigger: ACACAGAAGAGTTGTATAGCACCAGATTGGTTCCAA...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCCAAGAGGGCACTACCTaGCCATGGCTTCACAGGTCC +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPQEGTT*PWLHRS
Trigger: GGACCTGTGAAGCCATGGGCAGGTAGTGCCCTCTTG...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGCGTGCCAGCTAACTTaGAGGTTCGAGAAACCTTGC +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNACQLT*RFEKPC
Trigger: GCAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGC...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCGCGCTGACCAGGTGCTaGTGCAGCTCCAAAAGCACT +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPALTRC*CSSKST
Trigger: AGTGCTTTTGGAGCTGCAGCAGCACCTGGTCAGCGC...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCTGGGGAACCAGGTTGTaGGAGGTCCTAAAAGCGACA +
Preference number: 2 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGWGTRL*EVLKAT
Trigger: TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCA...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCCTGGGTCTGAGGACATaGGAGGGAGGAGCCATAAAA +
Preference number: 2 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGLGLRT*EGGAIK
Trigger: TTTTATGGCTCCTCCCTCCCATGTCCTCAGACCCAG...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTATTGCACTTGCGGCCTaGGAATATGAACGAGAGCCC +
Preference number: 2 (lower is better)
Translates to: VYVTCYKREQNLTVSIDIIALAA*EYEREP
Trigger: GGGCTCTCGTTCATATTCTCAGGCCGCAAGTGCAAT...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGCAAAGTAGCCAAACCTaGCTACCAAAGGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLQSSQT*LPKVRM
Trigger: CATTCTTACCTTTGGTAGTCAGGTTTGGCTACTTTG...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCCCGACTTATGAGGTATaGCGACAAATGTTAATAACA +
Preference number: 2 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFPTYEV*RQMLIT
Trigger: TGTTATTAACATTTGTCGTCATACCTCATAAGTCGG...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTGATCCCCTCAGGCATTaGACTTGCGGCCTGAGAATA +
Preference number: 2 (lower is better)
Translates to: VYVTCYKREQNLTVSIDIDPLRH*TCGLRI
Trigger: TATTCTCAGGCCGCAAGTGCAATGCCTGAGGGGATC...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGTCCATTTCTGGACTGTaGTCAAATTCACACCTTGTA +
Preference number: 2 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGSISGL*SNSHLV
Trigger: TACAAGGTGTGAATTTGAGCACAGTCCAGAAATGGA...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTCTTCTAGTGCATCTCTaGCCTCTCCGTGTTGGCAAG +
Preference number: 2 (lower is better)
Translates to: VYVTCYKREQNLTVSIDILLVHL*PLRVGK
Trigger: CTTGCCAACACGGAGAGGGCAGAGATGCACTAGAAG...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATAAAGAAGCTGCCGAATaGAACGGCAAAGCACAGCAC +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNKEAAE*NGKAQH
Trigger: GTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATTCTTTTTGGCACTATTaGTGGAAACAAGCCTGCTTG +
Preference number: 2 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNSFWHY*WKQACL
Trigger: CAAGCAGGCTTGTTTCCACCAATAGTGCCAAAAAGA...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGCCAGCAAGGTTGTCTaGAATGTCTGTTGTCAGAAC +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNASKVV*NVCCQN
Trigger: GTTCTGACAACAGACATTTCAGACAACCTTGCTGGC...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCCTCACAGTGAGAAGATaGACTTGGCCGCTTTCCAGG +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPLTVRR*TWPLSR
Trigger: CCTGGAAAGCGGCCAAGTTCATCTTCTCACTGTGAG...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCAGCTTCTGGAGTTGCTaGAGGAGAGTCCTATTAGTG +
Preference number: 2 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGSFWSC*RRVLLV
Trigger: CACTAATAGGACTCTCCTTCAGCAACTCCAGAAGCT...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR GCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCCAGTCTGGTTCAGTTaGAGCAGGTACATGGGTTGG +
Preference number: 2 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPPVWFS*SRYMGW
Trigger: CCAACCCATGTACCTGCTGCAACTGAACCAGACTGG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTTGGGGAACCAGGTTGTaGGAGGTCCTAAAAGCGACA +
Preference number: 2 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPWGTRL*EVLKAT
Trigger: TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCA...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAAGAACTATGGATGTGTaGGGAACCAGGTTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLRTMDV*GTRLWE
Trigger: CTCCCACAACCTGGTTCCCCACACATCCATAGTTCT...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGTTTAAAAGAGAGGGATaGGTCAGTGGAGGCCCATGG +
Preference number: 2 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLFKREG*VSGGPW
Trigger: CCATGGGCCTCCACTGACCCATCCCTCTCTTTTAAA...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGTATTTGGAACCAATCTaGTGCTATACAACTCTTCTG +
Preference number: 2 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLYLEPI*CYTTLL
Trigger: CAGAAGAGTTGTATAGCACCAGATTGGTTCCAAATA...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 90 bp GCCCCTAAATTTGAAACCTTTCCTTCCTCATTGCCCAAATGCTACTaGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTG +
Preference number: 2 (lower is better)
Translates to: APKFETFPSSLPKCY*SKSYLFAFFGPYRL
Trigger: CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTTGGGCAATGAGGAAGGAAAGGTTTCAAATTTAGGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATAAAACTTGGCTAGCTTaGAAGGAGGCATCGATCTCT +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNKTWLA*KEASIS
Trigger: AGAGATCGATGCCTCCTTTCAAGCTAGCCAAGTTTT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTCTTGAAAACCCAGTCTaGTTCAGTTGCAGCAGGTAC +
Preference number: 2 (lower is better)
Translates to: VYVTCYKREQNLTVSIDILENPV*FSCSRY
Trigger: GTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAG...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTATGCAGGTGGTCCACTaGGGCTTCTTTAGGAGAGAA +
Preference number: 2 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTMQVVH*GFFRRE
Trigger: TTCTCTCCTAAAGAAGCCCCAGTGGACCACCTGCAT...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR TCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGCAGGGACCGACTTATaGGGTATGACGACAAATGTT +
Preference number: 2 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPAGTDL*GMTTNV
Trigger: AACATTTGTCGTCATACCTCATAAGTCGGTCCCTGC...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTATTTTGGCACTATTGGTaGAAACAAGCCTGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLFWHYW*KQACLS
Trigger: GGACAAGCAGGCTTGTTTCCACCAATAGTGCCAAAA...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGATCCTGTACCTGATATaGAATGGAAGCCAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEILYLI*NGSQGV
Trigger: CACACCCTGGCTTCCATTCCATATCAGGTACAGGAT...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCATCAAATCCTGTACCTaGTATGGAATGGAAGCCAGG +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPIKSCT*YGMEAR
Trigger: CCTGGCTTCCATTCCATATCAGGTACAGGATTTGAT...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTTGCCTGATAATGACCTaGCAGTTTAAAAGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: VYVTCYKREQNLTVSIDICLIMT*QFKREG
Trigger: TCCCTCTCTTTTAAACTGTCAGGTCATTATCAGGCA...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGAGATTGACTCTTTATaGCTTATGGCCGCTCTGACA +
Preference number: 2 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPEIDSL*LMAALT
Trigger: TGTCAGAGCGGCCATAAGCCATAAAGAGTCAATCTC...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR TCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCTGCCTGATAATGACCTaGCAGTTTAAAAGAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPCLIMT*QFKREG
Trigger: TCCCTCTCTTTTAAACTGTCAGGTCATTATCAGGCA...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATATGACAAAGGTGGTTTaGGGATGTAAAAGTAGAGTT +
Preference number: 2 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNMTKVV*GCKSRV
Trigger: AACTCTACTTTTACATCCCCAAACCACCTTTGTCAT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTAAACATCTCCTTCACTaGTGCAATCTAAGAAAGGGA +
Preference number: 2 (lower is better)
Translates to: VYVTCYKREQNLTVSIDIKHLLH*CNLRKG
Trigger: TCCCTTTCTTAGATTGCACCAGTGAAGGAGATGTTT...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTATATCCCTTTTTAAGTaGAAAGTCGAGGGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPISLFK*KVEGCE
Trigger: TTCACAGCCCTCGACTTTGCACTTAAAAAGGGATAT...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTACCAAAGGTAAGAATGTaGATACACAAATGTCACCTA +
Preference number: 2 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLPKVRM*IHKCHL
Trigger: TAGGTGACATTTGTGTATCCACATTCTTACCTTTGG...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTCCAAAGGTAAGAATGTaGATACACAAATGTCACCTA +
Preference number: 2 (lower is better)
Translates to: VYVTCYKREQNLTVSIDIPKVRM*IHKCHL
Trigger: TAGGTGACATTTGTGTATCCACATTCTTACCTTTGG...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTAAACATCTCCTTCACTaGTGCAATCTAAGAAAGGGA +
Preference number: 2 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPKHLLH*CNLRKG
Trigger: TCCCTTTCTTAGATTGCACCAGTGAAGGAGATGTTT...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCTTGACCACAAAGGCATaGAACATTAATCTTCAAATG +
Preference number: 2 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGLTTKA*NINLQM
Trigger: CATTTGAAGATTAATGTTCCATGCCTTTGTGGTCAA...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR GCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCGGAGGAGCCATAAAATaGTGGAGAACAATTTTAAAA +
Preference number: 2 (lower is better)
Translates to: RIYKTERLKIYLAQHATPGGAIK*WRTILK
Trigger: TTTTAAAATTGTTCTCCAGCATTTTATGGCTCCTCC...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTGGCATTATGGCATTTTaGTGGCCAGAGTCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVGIMAF*WPESGV
Trigger: GACCCCAGACTCTGGCCACAAAAATGCCATAATGCC...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp GGCTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTaGGAGCAACGGAGGACACGGGTCAGTGCTTTGCCA +
Preference number: 3 (lower is better)
Translates to: GCCRGCSHQRPQ*EQRRTRVSALP
Trigger: TGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp GGAGGGATGCAGGCTCCCTTCTGCACAGGAGGGGCATaGACCAGGGGGAGATGCTCTCTCACTGCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: GGMQAPFCTGGA*TRGRCSLTAGK
Trigger: CTTCCCTGCAGTGAGAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGAGGCATTATGGCATTTTaGTGGCCAGAGTCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRGIMAF*WPESGV
Trigger: GACCCCAGACTCTGGCCACAAAAATGCCATAATGCC...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATGCGTGCCAGCTAACTaGCAGGTTCGAGAAACCTTG +
Preference number: 3 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRCVPAN*QVRETL
Trigger: CAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGCA...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR TCA 72 bp ACACCTGGGGGACTGCTCCAGCACGAAGGGAAGCGATaGGCATCACACAGCAGGGCCATTGCAGGGGACAGG +
Preference number: 3 (lower is better)
Translates to: TPGGLLQHEGKR*ASHSRAIAGDR
Trigger: CCTGTCCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCAGTCCCCCAGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp GATCCCCTCAGGCATTGCACTTGCGGCCTGAGAATATaGACGAGAGCCCTCGCCTGCCAGTGCTGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: DPLRHCTCGLRI*TRALACQCCCR
Trigger: CCTGCAGCAGCACTGGCAGGCGAGGGCTCTCGTTCATATTCTCAGGCCGCAAGTGCAATGCCTGAGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp GGGGGCCCGATCCAGCTTCCACTCACAGTGAGAAGATaGACTTGGCCGCTTTCCAGGCTGGAACCGTCTCCA +
Preference number: 3 (lower is better)
Translates to: GGPIQLPLTVRR*TWPLSRLEPSP
Trigger: TGGAGACGGTTCCAGCCTGGAAAGCGGCCAAGTTCATCTTCTCACTGTGAGTGGAAGCTGGATCGGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp CAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTaGTGCCGCAGTCCAGTGGATGAGGGGCCCCAGGGG +
Preference number: 3 (lower is better)
Translates to: QTVLCQALENSQ*CRSPVDEGPQG
Trigger: CCCCTGGGGCCCCTCATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
3UTR TCA 72 bp AGGACTACGGGGGCCCGATCCAGCTTCCACTCACAGTaGGAAGATGAACTTGGCCGCTTTCCAGGCTGGAAC +
Preference number: 3 (lower is better)
Translates to: RTTGARSSFHSQ*EDELGRFPGWN
Trigger: GTTCCAGCCTGGAAAGCGGCCAAGTTCATCTTCTCACTGTGAGTGGAAGCTGGATCGGGCCCCCGTAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCAGGCTCGCAGAAAACTaGGCTAGCTTGAAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTRLAEN*ASLKGG
Trigger: GCCTCCTTTCAAGCTAGCCAAGTTTTCTGCGAGCCT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp AAAAGCCTGATCCCCTCAGGCATTGCACTTGCGGCCTaGGAATATGAACGAGAGCCCTCGCCTGCCAGTGCT +
Preference number: 3 (lower is better)
Translates to: KSLIPSGIALAA*EYEREPSPASA
Trigger: AGCACTGGCAGGCGAGGGCTCTCGTTCATATTCTCAGGCCGCAAGTGCAATGCCTGAGGGGATCAGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp GGGAGGAGAAGCTGGGGAGGCAGAACTATGGATGTGTaGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACA +
Preference number: 3 (lower is better)
Translates to: GRRSWGGRTMDV*GTRLWEVLKAT
Trigger: TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCCTCCCCAGCTTCTCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGGGGTGCAGGCGTGGGTaGGGACTCAGGCTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLGCRRG*GLRLPS
Trigger: AGAGGGCAGCCTGAGTCCCAACCCACGCCTGCACCC...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR GCA 72 bp ATTGTCTGGAAAGACACGGGATCCCAGAGCCTAGGGTaGCCTCCTAGCTCTGAAGGCTCGCAGAAAACTTGG +
Preference number: 3 (lower is better)
Translates to: IVWKDTGSQSLG*PPSSEGSQKTW
Trigger: CCAAGTTTTCTGCGAGCCTTCAGAGCTAGGAGGGCACCCTAGGCTCTGGGATCCCGTGTCTTTCCAGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp GAGGAAGGGGAGGATGAAGGTCTTCTAGTGCATCTCTaGCCTCTCCGTGTTGGCAAGGTTGGCATGAATGGG +
Preference number: 3 (lower is better)
Translates to: EEGEDEGLLVHL*PLRVGKVGMNG
Trigger: CCCATTCATGCCAACCTTGCCAACACGGAGAGGGCAGAGATGCACTAGAAGACCTTCATCCTCCCCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp AGGATAGGGCCCGTAGCCTTGAAAGAAGCTGCCGAATaGAACGGCAAAGCACAGCACCACAACCATGAGGCA +
Preference number: 3 (lower is better)
Translates to: RIGPVALKEAAE*NGKAQHHNHEA
Trigger: TGCCTCATGGTTGTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR GCA 72 bp TGGCAGAAGGATAGGGCCCGTAGCCTTGAAAGAAGCTaGCGAATGCAACGGCAAAGCACAGCACCACAACCA +
Preference number: 3 (lower is better)
Translates to: WQKDRARSLERS*RMQRQSTAPQP
Trigger: TGGTTGTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTATCCTTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CAA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTCCAGAGTCTGGGGTCTaGACTGAACAAGAGCCATCT +
Preference number: 3 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSPESGV*TEQEPS
Trigger: AGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTGG...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp CGGGGCCTGAGTGAGGCATTGTGTCATCTCTCGCTCTaGGCTCATCCTAGAGGCAGACACATACATGCTCAA +
Preference number: 3 (lower is better)
Translates to: RGLSEALCHLSL*AHPRGRHIHAQ
Trigger: TTGAGCATGTATGTGTCTGCCTCTAGGATGAGCTCAGAGCGAGAGATGACACAATGCCTCACTCAGGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp TGCATCTCTGCCCTCTCCGTGTTGGCAAGGTTGGCATaGATGGGCCATTATTCAACTGGGGGTGGGATGTCT +
Preference number: 3 (lower is better)
Translates to: CISALSVLARLA*MGHYSTGGGMS
Trigger: AGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTGCCAACACGGAGAGGGCAGAGATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp GGCGCTGACCAGGTGCTGCTGCAGCTCCAAAAGCACTaGCTTCTCCAGGCTGGTCTCATTCGAGATAATGAA +
Preference number: 3 (lower is better)
Translates to: GADQVLLQLQKH*LLQAGLIRDNE
Trigger: TTCATTATCTCGAATGAGACCAGCCTGGAGAAGTCAGTGCTTTTGGAGCTGCAGCAGCACCTGGTCAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR CCA 72 bp TCTAGTGCATCTCTGCCCTCTCCGTGTTGGCAAGGTTaGCATGAATGGGCCATTATTCAACTGGGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: SSASLPSPCWQG*HEWAIIQLGVG
Trigger: TCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTGCCAACACGGAGAGGGCAGAGATGCACTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGCTAATTTTGCCCATATaGGTGTCAAATCTCATCCCC +
Preference number: 3 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGLILPI*VSNLIP
Trigger: GGGGATGAGATTTGACACCAATATGGGCAAAATTAG...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTATAGGGCCCGTAGCCTaGAAAGAAGCTGCCGAATGC +
Preference number: 3 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSIGPVA*KEAAEC
Trigger: GCATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTAT...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR TCA 72 bp GCATTATGGCATTTTTGTGGCCAGAGTCTGGGGTCTTaGCTGAACAAGAGCCATCTCGTCTCCAAAGCGGGG +
Preference number: 3 (lower is better)
Translates to: ALWHFCGQSLGS*LNKSHLVSKAG
Trigger: CCCCGCTTTGGAGACGAGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTGGCCACAAAAATGCCATAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp CAGGGGACAGGTGCTGTAATTCCTGCCCAGAGAACTTaGAAGCTTACAGTGTGCTCACAGGAAGGAATCGGC +
Preference number: 3 (lower is better)
Translates to: QGTGAVIPAQRT*KLTVCSQEGIG
Trigger: GCCGATTCCTTCCTGTGAGCACACTGTAAGCTTTCAAGTTCTCTGGGCAGGAATTACAGCACCTGTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp CCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTaGCAAATACCAACAGGCATTATGGCATTTTTGTGG +
Preference number: 3 (lower is better)
Translates to: PSASNGGHGSVL*QIPTGIMAFLW
Trigger: CCACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp GAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTaGTTTGCCAAATACCAACAGGCATTATGGCATTTT +
Preference number: 3 (lower is better)
Translates to: ETPVRATEDTGQ*FAKYQQALWHF
Trigger: AAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp TGGAACAAAAAGATAGGAGATGGACACCTGGGGGACTaGTCCAGCACGAAGGGAAGCGATGAGCATCACACA +
Preference number: 3 (lower is better)
Translates to: WNKKIGDGHLGD*SSTKGSDEHHT
Trigger: TGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCAGTCCCCCAGGTGTCCATCTCCTATCTTTTTGTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp ACAACTTTTAGTGTTTCATTCCCCTCCAGTTTGGCGCTGACCAGGTGCTGCTGCAGGCTCGCAGAAAACTaGGCTAGCTTGAAAGGAGGC +
Preference number: 3 (lower is better)
Translates to: TTFSVSFPSSLALTRCCCRLAEN*ASLKGG
Trigger: GCCTCCTTTCAAGCTAGCCAAGTTTTCTGCGAGCCT...GCAGCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGAAACACTAAAAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CAA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTTTAGGTTGTATCTCTTaGGGCGAGCTGCAAAGTAGC +
Preference number: 3 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSLGCIS*GELQSS
Trigger: GCTACTTTGCAGCTCGCCCAAAGAGATACAACCTAA...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCAAAGGAAACAAAACATaGTCTGGAAAGACACGGGAT +
Preference number: 3 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTKGNKT*SGKTRD
Trigger: ATCCCGTGTCTTTCCAGACAATGTTTTGTTTCCTTT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTCAGCAGGTACATGGGTaGGCTCATTCTCTCACTTCT +
Preference number: 3 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSQQVHG*AHSLTS
Trigger: AGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTG...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp ACGTCTGGGAGCCTTGAAAACCCAGTCTGGTTCAGTTaGAGCAGGTACATGGGTTGGCTCATTCTCTCACTT +
Preference number: 3 (lower is better)
Translates to: TSGSLENPVWFS*SRYMGWLILSL
Trigger: AAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAGGCTCCCAGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp TCTGCGTGCCAGCTAACTTGCAGGTTCGAGAAACCTTaGCCATCACCAAAGTCTGAAGCTTCTGGAGTTGCT +
Preference number: 3 (lower is better)
Translates to: SACQLTCRFEKP*PSPKSEASGVA
Trigger: AGCAACTCCAGAAGCTTCAGACTTTGGTGATGGGCAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR CCA 72 bp GTTGGCAAGGTTGGCATGAATGGGCCATTATTCAACTaGGGGTGGGATGTCTCCATTTCTGGACTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: VGKVGMNGPLFN*GWDVSISGLCS
Trigger: TGAGCACAGTCCAGAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp GGAACTCACAGAAGATTGGAACAAAAAGATAGGAGATaGACACCTGGGGGACTGCTCCAGCACGAAGGGAAG +
Preference number: 3 (lower is better)
Translates to: GTHRRLEQKDRR*TPGGLLQHEGK
Trigger: CTTCCCTTCGTGCTGGAGCAGTCCCCCAGGTGTCCATCTCCTATCTTTTTGTTCCAATCTTCTGTGAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTAGTCTAAGAGGCCACTaGGTGGGGAAAACAAATCCA +
Preference number: 3 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSSLRGH*VGKTNP
Trigger: TGGATTTGTTTTCCCCACCAAGTGGCCTCTTAGACT...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp CCTAGCTCTGAAGGCTCGCAGAAAACTTGGCTAGCTTaGAAGGAGGCATCGATCTCTTCAGTGTGGTTGCTA +
Preference number: 3 (lower is better)
Translates to: PSSEGSQKTWLA*KEASISSVWLL
Trigger: TAGCAACCACACTGAAGAGATCGATGCCTCCTTTCAAGCTAGCCAAGTTTTCTGCGAGCCTTCAGAGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp GTCTGTTGTCAGAACAGGGCTTCCCCTTCTCTGTCATaGAAACAGGATAGAAAAAGCTTGTGGCCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: VCCQNRASPSLS*KQDRKSLWPGS
Trigger: GCTCCCTGGCCACAAGCTTTTTCTATCCTGTTTTCATGACAGAGAAGGGGAAGCCCTGTTCTGACAACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp AGAAGAGCACGTTTCCTACTCTACGTCTGGGAGCCTTaGAAACCCAGTCTGGTTCAGTTGCAGCAGGTACAT +
Preference number: 3 (lower is better)
Translates to: RRARFLLYVWEP*KPSLVQLQQVH
Trigger: ATGTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAGGCTCCCAGACGTAGAGTAGGAAACGTGCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp GATGTTGGTTCTTGGAGCCCCCTTAAAAGGGCCATCTaGGCTCTCTGCCTAACGTCCCATTGTCTACATAGA +
Preference number: 3 (lower is better)
Translates to: DVGSWSPLKRAI*ALCLTSHCLHR
Trigger: TCTATGTAGACAATGGGACGTTAGGCAGAGAGCTCAGATGGCCCTTTTAAGGGGGCTCCAAGAACCAACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp CAGGGAACACAGTCTAGAACAGCAGTTTGCAAACTGTaGTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCC +
Preference number: 3 (lower is better)
Translates to: QGTQSRTAVCKL*SVKLWRIPSDA
Trigger: GGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCAAACTGCTGTTCTAGACTGTGTTCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
3UTR TCA 72 bp CTATGGATAGTCTCACCTGAAGGTGGCCAAATAAAATaGCTCTCAAGAGGGCACTACCTGCCCATGGCTTCA +
Preference number: 3 (lower is better)
Translates to: LWIVSPEGGQIK*LSRGHYLPMAS
Trigger: TGAAGCCATGGGCAGGTAGTGCCCTCTTGAGAGTCATTTTATTTGGCCACCTTCAGGTGAGACTATCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp AATTCTGCCTCTACGCTTTTGCTGGGTCTGAGGACATaGGAGGGAGGAGCCATAAAATGCTGGAGAACAATT +
Preference number: 3 (lower is better)
Translates to: NSASTLLLGLRT*EGGAIKCWRTI
Trigger: AATTGTTCTCCAGCATTTTATGGCTCCTCCCTCCCATGTCCTCAGACCCAGCAAAAGCGTAGAGGCAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp GGAAAGGGAGGGGGTGCAGGCAGCCTCTTTAGAAAGTaGTGTTCACTCTTCTGTCGAGTTCTACAACTTTTA +
Preference number: 3 (lower is better)
Translates to: GKGGGAGSLFRK*CSLFCRVLQLL
Trigger: TAAAAGTTGTAGAACTCGACAGAAGAGTGAACACCACTTTCTAAAGAGGCTGCCTGCACCCCCTCCCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CAA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTTACATAGATTCCGTTTaGGAAGGATGGTTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSYIDSV*EGWFPR
Trigger: TCTGGGAAACCATCCTTCCAAAACGGAATCTATGTA...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCTCATTCCCCTCCAGTTaGGCGCTGACCAGGTGCTGC +
Preference number: 3 (lower is better)
Translates to: RIYKTERLKIYLAQHATPSFPSS*ALTRCC
Trigger: GCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGA...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR CCA 72 bp CTTTGCCAAATACCAACAGGCATTATGGCATTTTTGTaGCCAGAGTCTGGGGTCTTGACTGAACAAGAGCCA +
Preference number: 3 (lower is better)
Translates to: LCQIPTGIMAFL*PESGVLTEQEP
Trigger: TGGCTCTTGTTCAGTCAAGACCCCAGACTCTGGCCACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp AAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTaGGATGTCTCCATTTCTGGACTGTGCTCAAATTCA +
Preference number: 3 (lower is better)
Translates to: KVGMNGPLFNWG*DVSISGLCSNS
Trigger: TGAATTTGAGCACAGTCCAGAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTACCCAGTCTGGTTCAGTaGCAGCAGGTACATGGGTTG +
Preference number: 3 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLPSLVQ*QQVHGL
Trigger: CAACCCATGTACCTGCTGCAACTGAACCAGACTGGG...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp GCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTaGACTGTGCTCAAATTCACACCTTGTATGACATGT +
Preference number: 3 (lower is better)
Translates to: AIIQLGVGCLHF*TVLKFTPCMTC
Trigger: ACATGTCATACAAGGTGTGAATTTGAGCACAGTCCAGAAATGGAGACATCCCACCCCCAGTTGAATAATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTTAGGCAATATCTTTTaGGCACTATTGGTGGAAACA +
Preference number: 3 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLGNIF*ALLVET
Trigger: TGTTTCCACCAATAGTGCCAAAAAGATATTGCCTAA...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCATCTCTTCAGTGTGGTaGCTAGCAGGAAGCCTCGGC +
Preference number: 3 (lower is better)
Translates to: RIYKTERLKIYLAQHATPISSVW*LAGSLG
Trigger: GCCGAGGCTTCCTGCTAGCAACCACACTGAAGAGAT...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCGCAGAAATCTTATTCTaGATCTTCCTCCGAATTTTC +
Preference number: 3 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFAEILF*IFLRIF
Trigger: GAAAATTCGGAGGAAGATCAAGAATAAGATTTCTGC...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR-3UTR CAA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGGCTCCAAGTTCTCAGTaGAACAAGACTCCACTTTTT +
Preference number: 3 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLAPSSQ*NKTPLF
Trigger: AAAAAGTGGAGTCTTGTTCAACTGAGAACTTGGAGC...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616381.4
3UTR TCA 72 bp GAGCCAGGTTCCTTTGCCCTGAGAAATGTTCCGCTATaGGGATTTATAATACCTTTAATCCTGGCTGGTTGT +
Preference number: 3 (lower is better)
Translates to: EPGSFALRNVPL*GFIIPLILAGC
Trigger: ACAACCAGCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAACCTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAACACGGGTCAGTGCTTaGCCAAATACCAACAGGCAT +
Preference number: 3 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLTRVSA*PNTNRH
Trigger: ATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGT...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTTGTCTGAAATGTCTGTaGTCAGAACAGGGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: VYVTCYKREQNLTVSIDICLKCL*SEQGFP
Trigger: GGGGAAGCCCTGTTCTGACAACAGACATTTCAGACA...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp TGTATCTCTTTGGGCGAGCTGCAAAGTAGCCAAACCTaGCTACCAAAGGTAAGAATGTGGATACACAAATGT +
Preference number: 3 (lower is better)
Translates to: CISLGELQSSQT*LPKVRMWIHKC
Trigger: ACATTTGTGTATCCACATTCTTACCTTTGGTAGTCAGGTTTGGCTACTTTGCAGCTCGCCCAAAGAGATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp CCTAGACAGACAAGGCAGGGACCGACTTATGAGGTATaGCGACAAATGTTAATAACATCAAATCCTGTACCT +
Preference number: 3 (lower is better)
Translates to: PRQTRQGPTYEV*RQMLITSNPVP
Trigger: AGGTACAGGATTTGATGTTATTAACATTTGTCGTCATACCTCATAAGTCGGTCCCTGCCTTGTCTGTCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR GCA 72 bp GTGCACACATCCATTAACTATTTGGAACCAATCTGGTaGTATACAACTCTTCTGTGTCCTCTTGACCCCATT +
Preference number: 3 (lower is better)
Translates to: VHTSINYLEPIW*YTTLLCPLDPI
Trigger: AATGGGGTCAAGAGGACACAGAAGAGTTGTATAGCACCAGATTGGTTCCAAATAGTTAATGGATGTGTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp AATGTGCACACATCCATTAACTATTTGGAACCAATCTaGTGCTATACAACTCTTCTGTGTCCTCTTGACCCC +
Preference number: 3 (lower is better)
Translates to: NVHTSINYLEPI*CYTTLLCPLDP
Trigger: GGGGTCAAGAGGACACAGAAGAGTTGTATAGCACCAGATTGGTTCCAAATAGTTAATGGATGTGTGCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CCA 72 bp ATGTTAATAACATCAAATCCTGTACCTGATATGGAATaGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTAC +
Preference number: 3 (lower is better)
Translates to: MLITSNPVPDME*KPGCGLNPSKY
Trigger: GTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATTCCATATCAGGTACAGGATTTGATGTTATTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTTTAGGTTGTATCTCTTaGGGCGAGCTGCAAAGTAGC +
Preference number: 3 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPLGCIS*GELQSS
Trigger: GCTACTTTGCAGCTCGCCCAAAGAGATACAACCTAA...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTAAAAGAGCAGTGATGTaGGTTCTTGGAGCCCCCTTA +
Preference number: 3 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPKRAVM*VLGAPL
Trigger: TAAGGGGGCTCCAAGAACCAACATCACTGCTCTTTT...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTCTTCTGCCCCTAAATTaGAAACCTTTCCTTCCTCAT +
Preference number: 3 (lower is better)
Translates to: VYVTCYKREQNLTVSIDILLPLN*KPFLPH
Trigger: ATGAGGAAGGAAAGGTTTCAAATTTAGGGGCAGAAG...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR TCA 72 bp TTGAAACCTTTCCTTCCTCATTGCCCAAATGCTACTTaGGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCT +
Preference number: 3 (lower is better)
Translates to: LKPFLPHCPNAT*VNLIFLPSLGP
Trigger: AGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTTGGGCAATGAGGAAGGAAAGGTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATTTAGGCAATATCTTTTaGGCACTATTGGTGGAAACA +
Preference number: 3 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNLGNIF*ALLVET
Trigger: TGTTTCCACCAATAGTGCCAAAAAGATATTGCCTAA...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTTACATAGATTCCGTTTaGGAAGGATGGTTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPYIDSV*EGWFPR
Trigger: TCTGGGAAACCATCCTTCCAAAACGGAATCTATGTA...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR-3UTR CAA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGGTAAATCTTATCTTTTaGCCTTCTTTGGGCCCTATA +
Preference number: 3 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEVNLIF*PSLGPI
Trigger: TATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTAC...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTTCCCAGGGGGCAGAGTaGGCGGAGGGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVSQGAE*AEGCCR
Trigger: CCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGA...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCAGCCGAGCCCGGGCTaGATGACTCCTCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVQPSPG*MTPLGE
Trigger: CTCCCCCAGAGGAGTCATCCAGCCCGGGCTCGGCTG...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGCTCTCTCTCCGCGTGTaGTTGCGTGTGTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQLSLRV*LRVCAR
Trigger: GCGCGCGCACACACGCAAGCACACGCGGAGAGAGAG...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATCTGAGTCACTGCCGTaGCTGCTCGGAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRSESLP*LLGGVG
Trigger: GCCCACCCCTCCGAGCAGTCACGGCAGTGACTCAGA...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGCACCAGAGACCCCAGTaGGAGCAACGGAGGACACGG +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQHQRPQ*EQRRTR
Trigger: CCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTG...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTGCCTGCCAGTGCTGCTaGAGGAGACGAGACGATCCA +
Preference number: 4 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVACQCC*RRRDDP
Trigger: TGGATCGTCTCGTCTCCTGCAGCAGCACTGGCAGGC...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGGCCGTCCCCGGGCTCTaGCAGCTCGCTCAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTAVPGL*QLAQLA
Trigger: CGCAAGCTGAGCGAGCTGTCAGAGCCCGGGGACGGC...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGAGTGCGTGTGGTACATaGGGGCCTCGCCGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTSACGT*GPRRPR
Trigger: CCGGGGACGGCGAGGCCCTCATGTACCACACGCACT...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGAACAGCACCACAACCATaGGGCAGGTGCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRTAPQP*GRCQSA
Trigger: CGCAGACTGGCACCTGCCTCATGGTTGTGGTGCTGT...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGCAAAGTCGAGGGCTGTaGAAAGAACCACGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQQSRGL*KEPRWG
Trigger: CCCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTG...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCCACTGCAGCACGCCCTaGTCCCCGCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALHCSTP*SPLSST
Trigger: GGTGCTGGAGAGCGGGGAGCAGGGCGTGCTGCAGTG...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTAGGTGCCAGTCTGCGTaGCAGCTAACTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVRCQSA*QLTCRF
Trigger: GAACCTGCAAGTTAGCTGGCACGCAGACTGGCACCT...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGCGGTGCGGGCCGCGCTaGGCCGAGGATGCTAAGCGC +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGRCGPR*AEDAKR
Trigger: GCGCTTAGCATCCTCGGCCCAGCGCGGCCCGCACCG...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGTGGAAAGCAAACGTCTaGTCCTCTGCCGGAGAGAGG +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQWKANV*SSAGER
Trigger: CCTCTCTCCGGCAGAGGAGCAGACGTTTGCTTTCCA...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330387.11
CDS-3UTR GCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCCTCTCCGCGTGTGCTTaGGTGTGTGCGCGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALLSACA*VCARAC
Trigger: ACACGCGCGCGCACACACGCAAGCACACGCGGAGAG...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCGGCAGGCTGAAGGGGTaGAGGCGTGGGTTGGGACTC +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALGRLKG*RRGLGL
Trigger: GAGTCCCAACCCACGCCTGCACCCCTTCAGCCTGCC...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATCACTGGTGGTAATGTaGGTGAAGGGCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRSLVVM*VKGDWA
Trigger: GGCCCAGTCGCCCTTCACCCACATTACCACCAGTGA...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGGGATCATTCAGGAGCTaGCCCAAGACGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQGSFRS*PKTFWE
Trigger: TTCCCAGAACGTCTTGGGTCAGCTCCTGAATGATCC...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGTGTGCTCAGCCTGGATaGGAGGCGCCGGGGACGTCG +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGCAQPG*EAPGTS
Trigger: CGACGTCCCCGGCGCCTCTCATCCAGGCTGAGCACA...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGAGGGAGCCCGGGGCCTaGGTGAGGCATTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTREPGA*VRHCVI
Trigger: GATGACACAATGCCTCACTCAGGCCCCGGGCTCCCT...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATCACCTACCCCACCCTaGTTTGTTGAGGTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRSPTPP*FVEVGD
Trigger: GTCCCCTACCTCAACAAAGCAGGGTGGGGTAGGTGA...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGCTTCTAGTGCATCTCTaGCCTCTCCGTGTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQLLVHL*PLRVGK
Trigger: CTTGCCAACACGGAGAGGGCAGAGATGCACTAGAAG...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGGGGCCCCAGGTGGGTGAAGGGCGACTaGGCCCGAGGCTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: KLWRIPSDAAVQWMRGPRWVKGD*ARGSSH
Trigger: GTGCGAGGAGCCTCGGGCCCAGTCGCCCTTCACCCA...CCTGGGGCCCCTCATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCTCCCAGGGGGCAGAGTaGGCGGAGGGCTGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTSQGAE*AEGCCR
Trigger: CCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGA...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGTCTGAGTCACTGCCGTaGCTGCTCGGAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGSESLP*LLGGVG
Trigger: GCCCACCCCTCCGAGCAGTCACGGCAGTGACTCAGA...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGATTGCACTTGCGGCCTaGGAATATGAACGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRIALAA*EYEREP
Trigger: GGGCTCTCGTTCATATTCTCAGGCCGCAAGTGCAAT...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGTGGAGTAGAAAAGCCTaGTCCCCTCAGGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRWSRKA*SPQALH
Trigger: GTGCAATGCCTGAGGGGATCAGGCTTTTCTACTCCA...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCTGGGTGAAGGGCGACTaGGCCCGAGGCTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTWVKGD*ARGSSH
Trigger: GTGCGAGGAGCCTCGGGCCCAGTCGCCCTTCACCCA...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTAGCAGGTACATGGGTTaGCTCATTCTCTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVSRYMG*LILSLL
Trigger: CAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCT...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGCTGGTGAGCGAAGGATaGGAGCAGAGAACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRLVSEG*EQRTEL
Trigger: TAGCTCTGTTCTCTGCTCCCATCCTTCGCTCACCAG...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTGCCGTCCCCGGGCTCTaGCAGCTCGCTCAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSAVPGL*QLAQLA
Trigger: CGCAAGCTGAGCGAGCTGTCAGAGCCCGGGGACGGC...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGTCCTGTGTTAAGTGCTaGCCCTTTGACCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRSCVKC*PFDHKG
Trigger: GCCTTTGTGGTCAAAGGGTCAGCACTTAACACAGGA...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGCACTGCAGCACGCCCTaGTCCCCGCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGHCSTP*SPLSST
Trigger: GGTGCTGGAGAGCGGGGAGCAGGGCGTGCTGCAGTG...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGGGACACTTGACTCACTaGCAGAACAAAGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQGHLTH*QNKEEP
Trigger: TGGCTCTTCTTTGTTCTGGCAGTGAGTCAAGTGTCC...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCACTCTCTCCTGTAACTaGCCTCCCAGCGGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALTLSCN*PPSGAY
Trigger: ATAGGCCCCGCTGGGAGGGCAGTTACAGGAGAGAGT...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGTCTCCAGCACCTCCATaGCGGTGCGGGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMSPAPP*RCGPRW
Trigger: CCAGCGCGGCCCGCACCGCCATGGAGGTGCTGGAGA...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGCTAAAAGCGACAAGATaGGGCAGGTTTGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRLKATR*GRFAWS
Trigger: ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAG...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGGATAGAAAAAGCTTGTaGCCAGGGAGCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTDRKSL*PGSPGP
Trigger: AGGCCCCGGGCTCCCTGGCCACAAGCTTTTTCTATC...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGCTTGAAAACCCAGTCTaGTTCAGTTGCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQLENPV*FSCSRY
Trigger: GTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAG...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCCAGCTCCAAAAGCACTaGCTTCTCCAGGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALQLQKH*LLQAGL
Trigger: GAGACCAGCCTGGAGAAGTCAGTGCTTTTGGAGCTG...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTTGCCTGATAATGACCTaGCAGTTTAAAAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVCLIMT*QFKREG
Trigger: TCCCTCTCTTTTAAACTGTCAGGTCATTATCAGGCA...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCATTTAAGGCACAAATaGGCATGTAAGGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVHLRHK*ACKGGM
Trigger: CATTCCTCCCTTACATGCTCATTTGTGCCTTAAATG...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCTTCTCACTCAGCTGGTaGGCGAAGGATGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALFSLSW*AKDGSR
Trigger: TCTGCTCCCATCCTTCGCTCACCAGCTGAGTGAGAA...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGGGGGACGCGCAGAGCTaGCTCGGACCGGCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMGDAQS*LGPARF
Trigger: GAACCTTGCCGGTCCGAGGCAGCTCTGCGCGTCCCC...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GGGCCCGTAGCCTTGAAAGAAGCTGCCGAATGCAACGGCAAAGCACAGCACCACACAGCTCGCTCAGCTTaGGGTCCCACTGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: GPVALKEAAECNGKAQHHTARSA*GPTAAR
Trigger: GCGTGCTGCAGTGGGACCGCAAGCTGAGCGAGCTGT...GTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR GCA 90 bp AAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGGGGCCCCAGGGGTTGGGACTCAGGCTaGCCTCTGAGTCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: KLWRIPSDAAVQWMRGPRGWDSG*PLSHCR
Trigger: ACGGCAGTGACTCAGAGGGCAGCCTGAGTCCCAACC...CCTGGGGCCCCTCATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGTCCAGACAACAGGGCTaGCAGGACTACGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGSRQQG*QDYGGP
Trigger: CGGGCCCCCGTAGTCCTGGCAGCCCTGTTGTCTGGA...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGTTAGGAATAATGGTCTaGCACGAGGAATCAACCCCA +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQLGIMV*HEESTP
Trigger: TGGGGTTGATTCCTCGTGCCAGACCATTATTCCTAA...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGCACTCAAGCAAGGAGTaGAGGGCAGAGGTTTATCTA +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRHSSKE*RAEVYL
Trigger: TAGATAAACCTCTGCCCTCCACTCCTTGCTTGAGTG...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGAGTGCGTGTGGTACATaGGGGCCTCGCCGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWSACGT*GPRRPR
Trigger: CCGGGGACGGCGAGGCCCTCATGTACCACACGCACT...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR TCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATTGGCAAGGTTGGCATaGATGGGCCATTATTCAACT +
Preference number: 4 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRLARLA*MGHYST
Trigger: AGTTGAATAATGGCCCATTCATGCCAACCTTGCCAA...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGGACGCGCAGAGCTaGCTCGGACCGGCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWGDAQS*LGPARF
Trigger: GAACCTTGCCGGTCCGAGGCAGCTCTGCGCGTCCCC...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGCTTGCGGTCCCACTaGAGCACGCCCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATSLRSH*STPCSP
Trigger: CGGGGAGCAGGGCGTGCTGCAGTGGGACCGCAAGCT...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGAGCTTGCGGTCCCACTaGAGCACGCCCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQSLRSH*STPCSP
Trigger: CGGGGAGCAGGGCGTGCTGCAGTGGGACCGCAAGCT...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGTCACTGCCGTGACTaGTCGGAGGGGTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMSHCRD*SEGWAA
Trigger: TGCCGCCCACCCCTCCGAGCAGTCACGGCAGTGACT...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGAGGCAGGTGCCAGTCTaGGTGCCAGCTAACTTGCAG +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGRQVPV*VPANLQ
Trigger: CTGCAAGTTAGCTGGCACGCAGACTGGCACCTGCCT...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCATGCAGGCTCCCTTCTaGACAGGAGGGGCATGGACC +
Preference number: 4 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTMQAPF*TGGAWT
Trigger: GGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCAT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCGATCCCCTCAGGCATTaGACTTGCGGCCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALDPLRH*TCGLRI
Trigger: TATTCTCAGGCCGCAAGTGCAATGCCTGAGGGGATC...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCACGGTGCGGGCCGCGCTaGGCCGAGGATGCTAAGCGC +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNARCGPR*AEDAKR
Trigger: GCGCTTAGCATCCTCGGCCCAGCGCGGCCCGCACCG...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGTGGGTGAAGGGCGACTaGGCCCGAGGCTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWWVKGD*ARGSSH
Trigger: GTGCGAGGAGCCTCGGGCCCAGTCGCCCTTCACCCA...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTGACTGCTCGGAGGGGTaGGCGGCAAATGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CTAQTVSALANGRDNKNPDCSEG*AANAGG
Trigger: ACCACCTGCATTTGCCGCCCACCCCTCCGAGCAGTC...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGGAAGGGGTGCAGGCGTaGGTTGGGACTCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMEGVQA*VGTQAA
Trigger: GGCAGCCTGAGTCCCAACCCACGCCTGCACCCCTTC...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGTTTTGGCACTATTGGTaGAAACAAGCCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRFWHYW*KQACLS
Trigger: GGACAAGCAGGCTTGTTTCCACCAATAGTGCCAAAA...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGGATAGAAAAAGCTTGTaGCCAGGGAGCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGDRKSL*PGSPGP
Trigger: AGGCCCCGGGCTCCCTGGCCACAAGCTTTTTCTATC...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGGCCCGTAGCCTTGAAAGAAGCTGCCGAATGCAACGGCAAAGCACAGCACCACGGCCGCTTTCCAGGCTaGAACCGTCTCCAGCATAGC +
Preference number: 4 (lower is better)
Translates to: GPVALKEAAECNGKAQHHGRFPG*NRLQHS
Trigger: GCTATGCTGGAGACGGTTCCAGCCTGGAAAGCGGCC...GTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR CCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATCCGTTTTGGAAGGATaGTTTCCCAGAGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRSVLEG*FPRERV
Trigger: GACTCTTTCTCTGGGAAACCATCCTTCCAAAACGGA...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGAGATTGACTCTTTATaGCTTATGGCCGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRREIDSL*LMAALT
Trigger: TGTCAGAGCGGCCATAAGCCATAAAGAGTCAATCTC...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGTTATTCAACTGGGGGTaGGATGTCTCCATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRLFNWG*DVSISG
Trigger: TCCAGAAATGGAGACATCCCACCCCCAGTTGAATAA...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGGGAAAACAAATCCACTaGTATTCTGGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQGKQIH*YSGLNP
Trigger: GGGATTAAGACCAGAATATCAGTGGATTTGTTTTCC...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGCGCTTTTGCTGGGTCTaGGGACATGGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGRFCWV*GHGREE
Trigger: CTCCTCCCTCCCATGTCCTCAGACCCAGCAAAAGCG...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGCCGCAAGCCCACTTaGCGCTACGGCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMSRKPT*RYGSRH
Trigger: GTGTCTGGAGCCGTAGCGGCAAGTGGGCTTGCGGCT...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACACTCTCCGCGTGTGCTTaGGTGTGTGCGCGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATLSACA*VCARAC
Trigger: ACACGCGCGCGCACACACGCAAGCACACGCGGAGAG...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGCTCTCTCTCCGCGTGTaGTTGCGTGTGTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWLSLRV*LRVCAR
Trigger: GCGCGCGCACACACGCAAGCACACGCGGAGAGAGAG...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGACAGCTCGCTCAGCTTaGGGTCCCACTGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMTARSA*GPTAAR
Trigger: GCGTGCTGCAGTGGGACCGCAAGCTGAGCGAGCTGT...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACAGGGGTGGGCGGCAAATaGAGGTGGTCCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATGVGGK*RWSTGA
Trigger: AGCCCCAGTGGACCACCTGCATTTGCCGCCCACCCC...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGTTGGGCCCTATAGGCTaGCTATGCCTGATAATGACC +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTLGPIG*LCLIMT
Trigger: GGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAA...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGCTGCCCTCTCCGTGTTaGCAAGGTTGGCATGAATGG +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGLPSPC*QGWHEW
Trigger: CCATTCATGCCAACCTTGCCAACACGGAGAGGGCAG...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCAGCCGTCCCCGGGCTCTaGCAGCTCGCTCAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISAVPGL*QLAQLA
Trigger: CGCAAGCTGAGCGAGCTGTCAGAGCCCGGGGACGGC...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR TCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGCAGGACCAGAGGGCCTaGTCCCTGCAGTTTATGAGG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGQDQRA*SLQFMR
Trigger: CCTCATAAACTGCAGGGATCAGGCCCTCTGGTCCTG...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTTGCGGCCTGAGAATATaGACGAGAGCCCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSCGLRI*TRALAC
Trigger: GCAGGCGAGGGCTCTCGTTCATATTCTCAGGCCGCA...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGGCCAGCAAGGTTGTCTaGAATGTCTGTTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTASKVV*NVCCQN
Trigger: GTTCTGACAACAGACATTTCAGACAACCTTGCTGGC...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGCTTAAAAGGGCCATCTaGGCTCTCTGCCTAACGTCC +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGLKRAI*ALCLTS
Trigger: GGACGTTAGGCAGAGAGCTCAGATGGCCCTTTTAAG...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGGGGACGCGCAGAGCTaGCTCGGACCGGCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHGDAQS*LGPARF
Trigger: GAACCTTGCCGGTCCGAGGCAGCTCTGCGCGTCCCC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATCACTGCAGCACGCCCTaGTCCCCGCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHHCSTP*SPLSST
Trigger: GGTGCTGGAGAGCGGGGAGCAGGGCGTGCTGCAGTG...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGTGGACCAGGGGGAGATaGTCTCTCACTGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGWTRGR*SLTAGK
Trigger: CTTCCCTGCAGTGAGAGAGCATCTCCCCCTGGTCCA...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCCACGGGTCAGTGCTTTaGCAAATACCAACAGGCATT +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALHGSVL*QIPTGI
Trigger: AATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTG...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGTCCATTTCTGGACTGTaGTCAAATTCACACCTTGTA +
Preference number: 4 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRSISGL*SNSHLV
Trigger: TACAAGGTGTGAATTTGAGCACAGTCCAGAAATGGA...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCCTGCCGGAGAGAGGATaGCCAAGCGCTCCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLPERG*PSAPVR
Trigger: CCGGACGGGAGCGCTTGGCCATCCTCTCTCCGGCAG...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330387.11
CDS-3UTR CCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGTCTGAGAAGTGCGTGTaGTACATGAGGGCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGSEKCV*YMRASP
Trigger: CGGCGAGGCCCTCATGTACCACACGCACTTCTCAGA...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CCA 90 bp GGGCCCGTAGCCTTGAAAGAAGCTGCCGAATGCAACGGCAAAGCACAGCACCACGGCGGCAAATGCAGGTaGTCCACTGGGGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: GPVALKEAAECNGKAQHHGGKCR*STGASL
Trigger: TAAAGAAGCCCCAGTGGACCACCTGCATTTGCCGCC...GTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGGCAGGGAATGCTGGCTaGGCAGAGCCATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMAGNAG*AEPSWW
Trigger: CCACCAAGATGGCTCTGCCCAGCCAGCATTCCCTGC...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGATCCTGTACCTGATATaGAATGGAAGCCAGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTILYLI*NGSQGV
Trigger: CACACCCTGGCTTCCATTCCATATCAGGTACAGGAT...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTGGCACTACCTGCCCATaGCTTCACAGGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSGTTCP*LHRSSQ
Trigger: CTGGCTGGACCTGTGAAGCCATGGGCAGGTAGTGCC...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGACAGCACCACAACCATaGGGCAGGTGCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQTAPQP*GRCQSA
Trigger: CGCAGACTGGCACCTGCCTCATGGTTGTGGTGCTGT...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGCAGCTCCAAAAGCACTaGCTTCTCCAGGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGQLQKH*LLQAGL
Trigger: GAGACCAGCCTGGAGAAGTCAGTGCTTTTGGAGCTG...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGTGCGGCCTGAGAATATaGACGAGAGCCCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWCGLRI*TRALAC
Trigger: GCAGGCGAGGGCTCTCGTTCATATTCTCAGGCCGCA...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGATCAAATCCTGTACCTaGTATGGAATGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTIKSCT*YGMEAR
Trigger: CCTGGCTTCCATTCCATATCAGGTACAGGATTTGAT...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGAAAATGCTGGACACTTaGCTCACTGCCAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTKMLDT*LTARTK
Trigger: CTTTGTTCTGGCAGTGAGTCAAGTGTCCAGCATTTT...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGACTATTTCTTTTCTCCTaGTGTGCAAATCTGATAGTG +
Preference number: 4 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRLFLFS*CANLIV
Trigger: CACTATCAGATTTGCACATCAGGAGAAAAGAAATAG...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGGCAGGTGCCAGTCTaGGTGCCAGCTAACTTGCAG +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMRQVPV*VPANLQ
Trigger: CTGCAAGTTAGCTGGCACGCAGACTGGCACCTGCCT...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGGAGGACACGGGTCAGTaGTTTGCCAAATACCAACAG +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGEDTGQ*FAKYQQ
Trigger: CTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTC...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACACTCGCCTGCCAGTGCTaGTGCAGGAGACGAGACGAT +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATLACQC*CRRRDD
Trigger: ATCGTCTCGTCTCCTGCAGCAGCACTGGCAGGCGAG...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCCGGTGCGGGCCGCGCTaGGCCGAGGATGCTAAGCGC +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLRCGPR*AEDAKR
Trigger: GCGCTTAGCATCCTCGGCCCAGCGCGGCCCGCACCG...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATTCTCCAGCACCTCCATaGCGGTGCGGGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNSPAPP*RCGPRW
Trigger: CCAGCGCGGCCCGCACCGCCATGGAGGTGCTGGAGA...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTTCTGAGAAGTGCGTGTaGTACATGAGGGCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSSEKCV*YMRASP
Trigger: CGGCGAGGCCCTCATGTACCACACGCACTTCTCAGA...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGAACGAGTCCTGGGGGTaGTTCGTCTGTAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGNESWG*FVCNWL
Trigger: GAGCCAGTTACAGACGAACCACCCCCAGGACTCGTT...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000620715.4
CDS-3UTR CCA 90 bp AAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGGGGCCCCAGGATGCAGGTGGTCCACTaGGGCTTCTTTAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: KLWRIPSDAAVQWMRGPRMQVVH*GFFRRE
Trigger: TTCTCTCCTAAAGAAGCCCCAGTGGACCACCTGCAT...CCTGGGGCCCCTCATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGAAGGGGTGCAGGCGTaGGTTGGGACTCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHEGVQA*VGTQAA
Trigger: GGCAGCCTGAGTCCCAACCCACGCCTGCACCCCTTC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCTTCGAGATAATGAAATaGGGAAGATCCACATCCGGC +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALFEIMK*GRSTSG
Trigger: GCCGGATGTGGATCTTCCCCATTTCATTATCTCGAA...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGGGGCCCCAGGCTCATCCAGAAGTTCTaGGAAGTGCGTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: KLWRIPSDAAVQWMRGPRLIQKF*EVRVVH
Trigger: ATGTACCACACGCACTTCTCAGAACTTCTGGATGAG...CCTGGGGCCCCTCATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATTGTGCTCAGCCTGGATaGGAGGCGCCGGGGACGTCG +
Preference number: 4 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNCAQPG*EAPGTS
Trigger: CGACGTCCCCGGCGCCTCTCATCCAGGCTGAGCACA...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTCCCACCCTGCTTTGTTaGGGTAGGGGACGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSPTLLC*GRGRGG
Trigger: TCCTCCTCGTCCCCTACCTCAACAAAGCAGGGTGGG...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGGCAGGGACCGACTTATaGGGTATGACGACAAATGTT +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGAGTDL*GMTTNV
Trigger: AACATTTGTCGTCATACCTCATAAGTCGGTCCCTGC...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTTACGTCTGGGAGCCTTaGAAACCCAGTCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: CTAQTVSALANGRDNKNPYVWEP*KPSLVQ
Trigger: CTGAACCAGACTGGGTTTTCAAGGCTCCCAGACGTA...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTCGCTTTTGCTGGGTCTaGGGACATGGGAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSRFCWV*GHGREE
Trigger: CTCCTCCCTCCCATGTCCTCAGACCCAGCAAAAGCG...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTAAACGTCTGCTCCTCTaGCGGAGAGAGGATGGCCAA +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSKRLLL*RREDGQ
Trigger: TTGGCCATCCTCTCTCCGGCAGAGGAGCAGACGTTT...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330387.11
CDS-3UTR GCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCACTCTCCGCGTGTGCTTaGGTGTGTGCGCGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISLSACA*VCARAC
Trigger: ACACGCGCGCGCACACACGCAAGCACACGCGGAGAG...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATCTCTCTCTCCGCGTGTaGTTGCGTGTGTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADLSLRV*LRVCAR
Trigger: GCGCGCGCACACACGCAAGCACACGCGGAGAGAGAG...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATAGCTTGCGGTCCCACTaGAGCACGCCCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNSLRSH*STPCSP
Trigger: CGGGGAGCAGGGCGTGCTGCAGTGGGACCGCAAGCT...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGGGGGTGGGCGGCAAATaGAGGTGGTCCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGGVGGK*RWSTGA
Trigger: AGCCCCAGTGGACCACCTGCATTTGCCGCCCACCCC...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
56% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCAAGTCACTGCCGTGACTaGTCGGAGGGGTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISSHCRD*SEGWAA
Trigger: TGCCGCCCACCCCTCCGAGCAGTCACGGCAGTGACT...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGGTGCCAGTCTGCGTaGCAGCTAACTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMRCQSA*QLTCRF
Trigger: GAACCTGCAAGTTAGCTGGCACGCAGACTGGCACCT...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTAGGTGCCAGTCTGCGTaGCAGCTAACTTGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSRCQSA*QLTCRF
Trigger: GAACCTGCAAGTTAGCTGGCACGCAGACTGGCACCT...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACAGCGCTGACCAGGTGCTaGTGCAGCTCCAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATALTRC*CSSKST
Trigger: AGTGCTTTTGGAGCTGCAGCAGCACCTGGTCAGCGC...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGAGTGGGCGGAGGGCTaGTGTCGGGGGTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADEWAEG*CRGCSH
Trigger: GTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTC...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACGCCCTCGCCTGCCAGTaGTGCTGCAGGAGACGAGAC +
Preference number: 4 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDALACQ*CCRRRD
Trigger: GTCTCGTCTCCTGCAGCAGCACTGGCAGGCGAGGGC...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTCTGAGAAGTGCGTGTaGTACATGAGGGCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQSEKCV*YMRASP
Trigger: CGGCGAGGCCCTCATGTACCACACGCACTTCTCAGA...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGGAAGGGGTGCAGGCGTaGGTTGGGACTCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGEGVQA*VGTQAA
Trigger: GGCAGCCTGAGTCCCAACCCACGCCTGCACCCCTTC...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTAGATCAGCAGGTTTCTaGATCTCACCACGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CTAQTVSALANGRDNKNPRSAGF*ISPRRL
Trigger: CAGCCTCCGTGGTGAGATCCAGAAACCTGCTGATCT...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTCTGGGCTGCAGACAGTaGAGCAGAGAGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSLGCRQ*SREKQK
Trigger: CTTCTGCTTCTCTCTGCTCCACTGTCTGCAGCCCAG...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGGGATGTCTCCATTTCTaGACTGTGCTCAAATTCACA +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTGCLHF*TVLKFT
Trigger: TGTGAATTTGAGCACAGTCCAGAAATGGAGACATCC...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp CCCGATCCAGCTTCCACTCACAGTGAGAAGATGAACTaGGCCGCTTTCCAGGCTGGAACCGTCTCCAGCATA +
Preference number: 4 (lower is better)
Translates to: PDPASTHSEKMN*AAFQAGTVSSI
Trigger: TATGCTGGAGACGGTTCCAGCCTGGAAAGCGGCCAAGTTCATCTTCTCACTGTGAGTGGAAGCTGGATCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp AGCCATCTTGGTGGCAGAAGGATAGGGCCCGTAGCCTaGAAAGAAGCTGCCGAATGCAACGGCAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: SHLGGRRIGPVA*KEAAECNGKAQ
Trigger: CTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTATCCTTCTGCCACCAAGATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR TCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCAGTGCGTGTGGTACATaGGGGCCTCGCCGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLSACGT*GPRRPR
Trigger: CCGGGGACGGCGAGGCCCTCATGTACCACACGCACT...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCTGTGCTCAGCCTGGATaGGAGGCGCCGGGGACGTCG +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLCAQPG*EAPGTS
Trigger: CGACGTCCCCGGCGCCTCTCATCCAGGCTGAGCACA...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATCGAGCCCGGGCTGGATaGCTCCTCTGGGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNRARAG*LLWGRM
Trigger: CATTCTCCCCCAGAGGAGTCATCCAGCCCGGGCTCG...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCCTCCAGTTTGGCGCTaGCCAGGTGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFPPVWR*PGAAAA
Trigger: AGCTGCAGCAGCACCTGGTCAGCGCCAAACTGGAGG...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGCTGGAGAATTCCCAGTaGTGCCGCAGTCCAGTGGAT +
Preference number: 4 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQLENSQ*CRSPVD
Trigger: ATCCACTGGACTGCGGCATCACTGGGAATTCTCCAG...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATACAGCTCGCTCAGCTTaGGGTCCCACTGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADTARSA*GPTAAR
Trigger: GCGTGCTGCAGTGGGACCGCAAGCTGAGCGAGCTGT...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGAGTCACTGCCGTGACTaGTCGGAGGGGTGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLSHCRD*SEGWAA
Trigger: TGCCGCCCACCCCTCCGAGCAGTCACGGCAGTGACT...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGTGCCCTCTGAGTCACTaGCGTGACTGCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGCPLSH*RDCSEG
Trigger: CCCCTCCGAGCAGTCACGGCAGTGACTCAGAGGGCA...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGGTTGGGACTCAGGCTaGCCTCTGAGTCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHGWDSG*PLSHCR
Trigger: ACGGCAGTGACTCAGAGGGCAGCCTGAGTCCCAACC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGGGGCCCCAGGAGGTTCGAGAAACCTTaGCCATCACCAAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: KLWRIPSDAAVQWMRGPRRFEKP*PSPKSE
Trigger: TTCAGACTTTGGTGATGGGCAAGGTTTCTCGAACCT...CCTGGGGCCCCTCATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCGCCTGCCAGTGCTGCTaGAGGAGACGAGACGATCCA +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFACQCC*RRRDDP
Trigger: TGGATCGTCTCGTCTCCTGCAGCAGCACTGGCAGGC...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCCTCGCCTGCCAGTGCTaGTGCAGGAGACGAGACGAT +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLACQC*CRRRDD
Trigger: ATCGTCTCGTCTCCTGCAGCAGCACTGGCAGGCGAG...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGGGACACCTGGGGGACTaGTCCAGCACGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGGHLGD*SSTKGS
Trigger: GCTTCCCTTCGTGCTGGAGCAGTCCCCCAGGTGTCC...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGGGACACCTGGGGGACTaGTCCAGCACGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLGHLGD*SSTKGS
Trigger: GCTTCCCTTCGTGCTGGAGCAGTCCCCCAGGTGTCC...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCCTGCCGGAGAGAGGATaGCCAAGCGCTCCCGTCCGG +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLLPERG*PSAPVR
Trigger: CCGGACGGGAGCGCTTGGCCATCCTCTCTCCGGCAG...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGGACTGCTCGGAGGGGTaGGCGGCAAATGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGDCSEG*AANAGG
Trigger: ACCACCTGCATTTGCCGCCCACCCCTCCGAGCAGTC...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCAGATCCACATCCGGCCTaGACTCCAGCCCTGACACCC +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISDPHPA*TPALTP
Trigger: GGGTGTCAGGGCTGGAGTCCAGGCCGGATGTGGATC...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTTCGATCTCTTCAGTGTaGTTGCTAGCAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: CTAQTVSALANGRDNKNPSISSV*LLAGSL
Trigger: GAGGCTTCCTGCTAGCAACCACACTGAAGAGATCGA...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCGGCCGCTTTCCAGGCTaGAACCGTCTCCAGCATAGC +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFGRFPG*NRLQHS
Trigger: GCTATGCTGGAGACGGTTCCAGCCTGGAAAGCGGCC...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCAAACATCTCCTTCACTaGTGCAATCTAAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALKHLLH*CNLRKG
Trigger: TCCCTTTCTTAGATTGCACCAGTGAAGGAGATGTTT...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGTTATTCAACTGGGGGTaGGATGTCTCCATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGLFNWG*DVSISG
Trigger: TCCAGAAATGGAGACATCCCACCCCCAGTTGAATAA...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCCAAGGTTGGCATGAATaGGCCATTATTCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTQGWHE*AIIQLG
Trigger: CCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTGCCGTCCCCGGGCTCTaGCAGCTCGCTCAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVAVPGL*QLAQLA
Trigger: CGCAAGCTGAGCGAGCTGTCAGAGCCCGGGGACGGC...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGATCATTCAGGAGCTaGCCCAAGACGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWGSFRS*PKTFWE
Trigger: TTCCCAGAACGTCTTGGGTCAGCTCCTGAATGATCC...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR TCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATCAGGACCAGAGGGCCTaGTCCCTGCAGTTTATGAGG +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHQDQRA*SLQFMR
Trigger: CCTCATAAACTGCAGGGATCAGGCCCTCTGGTCCTG...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGAGCTTCTGGAGTTGCTaGAGGAGAGTCCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGSFWSC*RRVLLV
Trigger: CACTAATAGGACTCTCCTTCAGCAACTCCAGAAGCT...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTACAGCACCACAACCATaGGGCAGGTGCCAGTCTGCG +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFTAPQP*GRCQSA
Trigger: CGCAGACTGGCACCTGCCTCATGGTTGTGGTGCTGT...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGCAGAGTCTGGGGTCTTaGCTGAACAAGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWQSLGS*LNKSHL
Trigger: GAGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTG...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATAGCCCGGGGCCTGAGTaGGGCATTGTGTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADSPGPE*GIVSSL
Trigger: GAGAGATGACACAATGCCTCACTCAGGCCCCGGGCT...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GGGCCCGTAGCCTTGAAAGAAGCTGCCGAATGCAACGGCAAAGCACAGCACCACTTGGCAAGGTTGGCATaGATGGGCCATTATTCAACT +
Preference number: 4 (lower is better)
Translates to: GPVALKEAAECNGKAQHHLARLA*MGHYST
Trigger: AGTTGAATAATGGCCCATTCATGCCAACCTTGCCAA...GTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGAGCCGCAAGCCCACTTaGCGCTACGGCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLSRKPT*RYGSRH
Trigger: GTGTCTGGAGCCGTAGCGGCAAGTGGGCTTGCGGCT...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330387.11
CDS-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGACAGCTCGCTCAGCTTaGGGTCCCACTGCAGCACGC +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLTARSA*GPTAAR
Trigger: GCGTGCTGCAGTGGGACCGCAAGCTGAGCGAGCTGT...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCGGGGTGGGCGGCAAATaGAGGTGGTCCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLGVGGK*RWSTGA
Trigger: AGCCCCAGTGGACCACCTGCATTTGCCGCCCACCCC...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACAGCGTGCCAGCTAACTTaGAGGTTCGAGAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATACQLT*RFEKPC
Trigger: GCAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGC...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATAGGCAGGTGCCAGTCTaGGTGCCAGCTAACTTGCAG +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHRQVPV*VPANLQ
Trigger: CTGCAAGTTAGCTGGCACGCAGACTGGCACCTGCCT...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGCGCTGACCAGGTGCTaGTGCAGCTCCAAAAGCACT +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHALTRC*CSSKST
Trigger: AGTGCTTTTGGAGCTGCAGCAGCACCTGGTCAGCGC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTTGGCGCTGACCAGGTaGTGCTGCAGCTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLALTR*CCSSKS
Trigger: GCTTTTGGAGCTGCAGCAGCACCTGGTCAGCGCCAA...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGACGAGAGCCCTCGCCTaGCAGTGCTGCTGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLTRALA*QCCCRR
Trigger: TCTCCTGCAGCAGCACTGGCAGGCGAGGGCTCTCGT...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGATCCCCTCAGGCATTaGACTTGCGGCCTGAGAATA +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWDPLRH*TCGLRI
Trigger: TATTCTCAGGCCGCAAGTGCAATGCCTGAGGGGATC...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGCCAGTCTGGTTCAGTTaGAGCAGGTACATGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWPVWFS*SRYMGW
Trigger: CCAACCCATGTACCTGCTGCAACTGAACCAGACTGG...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGGGACACTTGACTCACTaGCAGAACAAAGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGGHLTH*QNKEEP
Trigger: TGGCTCTTCTTTGTTCTGGCAGTGAGTCAAGTGTCC...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGAGACCCTGCCCAACTTaGCACATGCTGTCTTACCCA +
Preference number: 4 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQRPCPT*HMLSYP
Trigger: TGGGTAAGACAGCATGTGGCAAGTTGGGCAGGGTCT...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGTTCACAATATTCTCCTaGCTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMFTIFS*LSLPSS
Trigger: GCTACTGGGGAGGCTGAGGCAGGAGAATATTGTGAA...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTAACGAGTCCTGGGGGTaGTTCGTCTGTAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSNESWG*FVCNWL
Trigger: GAGCCAGTTACAGACGAACCACCCCCAGGACTCGTT...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330387.11
CDS-3UTR CCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGCAGGGAATGCTGGCTaGGCAGAGCCATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADAGNAG*AEPSWW
Trigger: CCACCAAGATGGCTCTGCCCAGCCAGCATTCCCTGC...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATCAGCAGGTTTCTaGATCTCACCACGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATRSAGF*ISPRRL
Trigger: CAGCCTCCGTGGTGAGATCCAGAAACCTGCTGATCT...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGGCCCGTAGCCTTGAAAGAAGCTGCCGAATGCAACGGCAAAGCACAGCACCACTTCGAGATAATGAAATaGGGAAGATCCACATCCGGC +
Preference number: 4 (lower is better)
Translates to: GPVALKEAAECNGKAQHHFEIMK*GRSTSG
Trigger: GCCGGATGTGGATCTTCCCCATTTCATTATCTCGAA...GTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGATGACAAAGGTGGTTTaGGGATGTAAAAGTAGAGTT +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTMTKVV*GCKSRV
Trigger: AACTCTACTTTTACATCCCCAAACCACCTTTGTCAT...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGTATTTGGAACCAATCTaGTGCTATACAACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LLSGVFTPETPVRATEDTYLEPI*CYTTLL
Trigger: CAGAAGAGTTGTATAGCACCAGATTGGTTCCAAATA...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp CCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTaGCCAAATACCAACAGGCATTATGGCATTTTTGTG +
Preference number: 4 (lower is better)
Translates to: PQCEQRRTRVSA*PNTNRHYGIFV
Trigger: CACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp GCAGGGGACAGGTGCTGTAATTCCTGCCCAGAGAACTaGAAAGCTTACAGTGTGCTCACAGGAAGGAATCGG +
Preference number: 4 (lower is better)
Translates to: AGDRCCNSCPEN*KAYSVLTGRNR
Trigger: CCGATTCCTTCCTGTGAGCACACTGTAAGCTTTCAAGTTCTCTGGGCAGGAATTACAGCACCTGTCCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTTCCAGACACAAACTTTaGGGGACCCCAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFSRHKL*GTPGLL
Trigger: GAGGAGCCCTGGGGTCCCTCAAAGTTTGTGTCTGGA...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330387.11
CDS-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTGTCTGGGGTCTTGACTaGACAAGAGCCATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSVWGLD*TRAISS
Trigger: AGACGAGATGGCTCTTGTTCAGTCAAGACCCCAGAC...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp ACAACTTTTAGTGTTTCATTCCCCTCCAGTTTGGCGCTGACCAGGTGCTGCTGCTGGAGTAGAAAAGCCTaGTCCCCTCAGGCATTGCAC +
Preference number: 4 (lower is better)
Translates to: TTFSVSFPSSLALTRCCCWSRKA*SPQALH
Trigger: GTGCAATGCCTGAGGGGATCAGGCTTTTCTACTCCA...GCAGCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGAAACACTAAAAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR TCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATCCCACCCTGCTTTGTTaGGGTAGGGGACGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNPTLLC*GRGRGG
Trigger: TCCTCCTCGTCCCCTACCTCAACAAAGCAGGGTGGG...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTATCAAATCCTGTACCTaGTATGGAATGGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CTAQTVSALANGRDNKNPIKSCT*YGMEAR
Trigger: CCTGGCTTCCATTCCATATCAGGTACAGGATTTGAT...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCACATTAATCTTCAAATaGGCCAGGTTCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTTLIFK*ARFLCP
Trigger: AGGGCAAAGGAACCTGGCTCATTTGAAGATTAATGT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATCACGAAGGGAAGCGATaGGCATCACACAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNHEGKR*ASHSRA
Trigger: GGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTG...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCTGCCCTCTGAGTCACTaGCGTGACTGCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLCPLSH*RDCSEG
Trigger: CCCCTCCGAGCAGTCACGGCAGTGACTCAGAGGGCA...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGAAAGAAGCTGCCGAATaGAACGGCAAAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQKEAAE*NGKAQH
Trigger: GTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTT...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGAGCCTTGAAAGAAGCTaGCGAATGCAACGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQSLERS*RMQRQS
Trigger: GCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCT...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCACTGACCAGGTGCTGCTaGAGCTCCAAAAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNALTRCC*SSKSTD
Trigger: GTCAGTGCTTTTGGAGCTGCAGCAGCACCTGGTCAG...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTCACCTACCCCACCCTaGTTTGTTGAGGTAGGGGAC +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFSPTPP*FVEVGD
Trigger: GTCCCCTACCTCAACAAAGCAGGGTGGGGTAGGTGA...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGTCTTTTCTCCTGATGTaGAAATCTGATAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGSFLLM*KSDSGS
Trigger: TGAGCCACTATCAGATTTGCACATCAGGAGAAAAGA...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTTCTCCAGCACCTCCATaGCGGTGCGGGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDISPAPP*RCGPRW
Trigger: CCAGCGCGGCCCGCACCGCCATGGAGGTGCTGGAGA...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATTCTGAGAAGTGCGTGTaGTACATGAGGGCCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADSEKCV*YMRASP
Trigger: CGGCGAGGCCCTCATGTACCACACGCACTTCTCAGA...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCTGGGTGAAGGGCGACTaGGCCCGAGGCTCCTCGCAC +
Preference number: 4 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGWVKGD*ARGSSH
Trigger: GTGCGAGGAGCCTCGGGCCCAGTCGCCCTTCACCCA...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCATCACTGGTGGTAATGTaGGTGAAGGGCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISSLVVM*VKGDWA
Trigger: GGCCCAGTCGCCCTTCACCCACATTACCACCAGTGA...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCAGACGGAACGAGTCCTaGGGGTGGTTCGTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFRRNES*GWFVCN
Trigger: GTTACAGACGAACCACCCCCAGGACTCGTTCCGTCT...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330387.11
CDS-3UTR CCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAAGACGGAACGAGTCCTaGGGGTGGTTCGTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNARRNES*GWFVCN
Trigger: GTTACAGACGAACCACCCCCAGGACTCGTTCCGTCT...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000620715.4
CDS-3UTR CCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACATCGATCTCTTCAGTGTaGTTGCTAGCAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATSISSV*LLAGSL
Trigger: GAGGCTTCCTGCTAGCAACCACACTGAAGAGATCGA...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGAGGCCCAACAGGATCTaGGCTGCAGACAGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGRPNRI*AADSGA
Trigger: TGCTCCACTGTCTGCAGCCCAGATCCTGTTGGGCCT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGAAACATCTCCTTCACTaGTGCAATCTAAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGKHLLH*CNLRKG
Trigger: TCCCTTTCTTAGATTGCACCAGTGAAGGAGATGTTT...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATACCTTGTATGACATGTaGGCAGAGGAGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHTLYDM*AEELAW
Trigger: CCAGGCCAGCTCCTCTGCCCACATGTCATACAAGGT...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCCTGCCCTCTCCGTGTTaGCAAGGTTGGCATGAATGG +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLPSPC*QGWHEW
Trigger: CCATTCATGCCAACCTTGCCAACACGGAGAGGGCAG...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAAGTGCGTGTGGTACATaGGGGCCTCGCCGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLSACGT*GPRRPR
Trigger: CCGGGGACGGCGAGGCCCTCATGTACCACACGCACT...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCGGATCATTCAGGAGCTaGCCCAAGACGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFGSFRS*PKTFWE
Trigger: TTCCCAGAACGTCTTGGGTCAGCTCCTGAATGATCC...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTTCTGAGTCACTGCCGTaGCTGCTCGGAGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVSESLP*LLGGVG
Trigger: GCCCACCCCTCCGAGCAGTCACGGCAGTGACTCAGA...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTGTCATCTCTCGCTCTaGGCTCATCCTAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHCHLSL*AHPRGR
Trigger: TCTGCCTCTAGGATGAGCTCAGAGCGAGAGATGACA...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTCAAAGTAGCCAAACCTaGCTACCAAAGGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: CTAQTVSALANGRDNKNPQSSQT*LPKVRM
Trigger: CATTCTTACCTTTGGTAGTCAGGTTTGGCTACTTTG...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GGGCCCGTAGCCTTGAAAGAAGCTGCCGAATGCAACGGCAAAGCACAGCACCACGGAAAACAAATCCACTaGTATTCTGGTCTTAATCCC +
Preference number: 4 (lower is better)
Translates to: GPVALKEAAECNGKAQHHGKQIH*YSGLNP
Trigger: GGGATTAAGACCAGAATATCAGTGGATTTGTTTTCC...GTGGTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCTACGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR TCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGTGGCCAAATAAAATaGCTCTCAAGAGGGCACTAC +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWGGQIK*LSRGHY
Trigger: GTAGTGCCCTCTTGAGAGTCATTTTATTTGGCCACC...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGCATTTAAGGCACAAATaGGCATGTAAGGGAGGAATG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGHLRHK*ACKGGM
Trigger: CATTCCTCCCTTACATGCTCATTTGTGCCTTAAATG...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTCTCTCCGCGTGTGCTTaGGTGTGTGCGCGCGCGTGT +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVLSACA*VCARAC
Trigger: ACACGCGCGCGCACACACGCAAGCACACGCGGAGAG...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTGGGGACGCGCAGAGCTaGCTCGGACCGGCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDIGDAQS*LGPARF
Trigger: GAACCTTGCCGGTCCGAGGCAGCTCTGCGCGTCCCC...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAATTAGATGTCAGAATGGATCAGGGAACACAGTCTAGAACAGCAGTTTGCAAACACTGCAGCACGCCCTaGTCCCCGCTCTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KLDVRMDQGTQSRTAVCKHCSTP*SPLSST
Trigger: GGTGCTGGAGAGCGGGGAGCAGGGCGTGCTGCAGTG...TTTGCAAACTGCTGTTCTAGACTGTGTTCCCTGATCCATTCTGACATCTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTAGCTTGCGGTCCCACTaGAGCACGCCCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDISLRSH*STPCSP
Trigger: CGGGGAGCAGGGCGTGCTGCAGTGGGACCGCAAGCT...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGCGTGCCAGCTAACTTaGAGGTTCGAGAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNAACQLT*RFEKPC
Trigger: GCAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGC...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCTTGGAACCAATCTGGTaGTATACAACTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTLEPIW*YTTLLC
Trigger: ACACAGAAGAGTTGTATAGCACCAGATTGGTTCCAA...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGCAAGAGGGCACTACCTaGCCATGGCTTCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLQEGTT*PWLHRS
Trigger: GGACCTGTGAAGCCATGGGCAGGTAGTGCCCTCTTG...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGACTCTCTCCTGTAACTaGCCTCCCAGCGGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLTLSCN*PPSGAY
Trigger: ATAGGCCCCGCTGGGAGGGCAGTTACAGGAGAGAGT...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGTCTCCAGCACCTCCATaGCGGTGCGGGCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCESPAPP*RCGPRW
Trigger: CCAGCGCGGCCCGCACCGCCATGGAGGTGCTGGAGA...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGTTAGGAATAATGGTCTaGCACGAGGAATCAACCCCA +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMLGIMV*HEESTP
Trigger: TGGGGTTGATTCCTCGTGCCAGACCATTATTCCTAA...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTTTAGGAATAATGGTCTaGCACGAGGAATCAACCCCA +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSLGIMV*HEESTP
Trigger: TGGGGTTGATTCCTCGTGCCAGACCATTATTCCTAA...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGGCGGCAAATGCAGGTaGTCCACTGGGGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADGGKCR*STGASL
Trigger: TAAAGAAGCCCCAGTGGACCACCTGCATTTGCCGCC...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATGACTGCTCGGAGGGGTaGGCGGCAAATGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHDCSEG*AANAGG
Trigger: ACCACCTGCATTTGCCGCCCACCCCTCCGAGCAGTC...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTTCTTTTTGGCACTATTaGTGGAAACAAGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CTAQTVSALANGRDNKNPSFWHY*WKQACL
Trigger: CAAGCAGGCTTGTTTCCACCAATAGTGCCAAAAAGA...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTAAGAGTCCTGCTGTTTaGAGGTCGAGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSKSPAV*RSRESD
Trigger: GTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTT...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATCCAACTGTAGTGACTTaGGGCAGAGGAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADPTVVT*GRGRGG
Trigger: TCCTCCCCTTCCTCTGCCCCAAGTCACTACAGTTGG...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGTGTGCTCAGCCTGGATaGGAGGCGCCGGGGACGTCG +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCECAQPG*EAPGTS
Trigger: CGACGTCCCCGGCGCCTCTCATCCAGGCTGAGCACA...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTAGCTTCTGGAGTTGCTaGAGGAGAGTCCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSSFWSC*RRVLLV
Trigger: CACTAATAGGACTCTCCTTCAGCAACTCCAGAAGCT...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCGAGCCCGGGCTGGATaGCTCCTCTGGGGGAGAATG +
Preference number: 4 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLRARAG*LLWGRM
Trigger: CATTCTCCCCCAGAGGAGTCATCCAGCCCGGGCTCG...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTGTCTGGGGTCTTGACTaGACAAGAGCCATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFVWGLD*TRAISS
Trigger: AGACGAGATGGCTCTTGTTCAGTCAAGACCCCAGAC...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGATTGCACTTGCGGCCTaGGAATATGAACGAGAGCCC +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLIALAA*EYEREP
Trigger: GGGCTCTCGTTCATATTCTCAGGCCGCAAGTGCAAT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGTGTCATCTCTCGCTCTaGGCTCATCCTAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLCHLSL*AHPRGR
Trigger: TCTGCCTCTAGGATGAGCTCAGAGCGAGAGATGACA...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCCCGACTTATGAGGTATaGCGACAAATGTTAATAACA +
Preference number: 4 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTPTYEV*RQMLIT
Trigger: TGTTATTAACATTTGTCGTCATACCTCATAAGTCGG...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCTCACAGTGAGAAGATaGACTTGGCCGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFLTVRR*TWPLSR
Trigger: CCTGGAAAGCGGCCAAGTTCATCTTCTCACTGTGAG...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGAGCTTCCACTCACAGTaGGAAGATGAACTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLSFHSQ*EDELGR
Trigger: GCGGCCAAGTTCATCTTCTCACTGTGAGTGGAAGCT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCGGCTTATGGCCGCTCTaGCAGACTCGTATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFGLWPL*QTRISQ
Trigger: TTGAGAAATACGAGTCTGTCAGAGCGGCCATAAGCC...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTAATTCACACCTTGTATaGCATGTGGGCAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSNSHLV*HVGRGA
Trigger: AGCTCCTCTGCCCACATGTCATACAAGGTGTGAATT...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAAGAGGAAGGGGAGGATaGAGGTCTTCTAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNARGRGG*RSSSAS
Trigger: AGATGCACTAGAAGACCTTCATCCTCCCCTTCCTCT...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATCCTGCCCAGAGAACTTaGAAGCTTACAGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHPAQRT*KLTVCS
Trigger: TGAGCACACTGTAAGCTTTCAAGTTCTCTGGGCAGG...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTGTGACAGATGGATGTTaGAGGGAAGTCTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSVTDGC*REVCRQ
Trigger: CTGTCTACAGACTTCCCTTCAACATCCATCTGTCAC...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR GCA 90 bp AAATTAGATGTCAGAATGGATCAGGGAACACAGTCTAGAACAGCAGTTTGCAAACTCTCTCTCCGCGTGTaGTTGCGTGTGTGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: KLDVRMDQGTQSRTAVCKLSLRV*LRVCAR
Trigger: GCGCGCGCACACACGCAAGCACACGCGGAGAGAGAG...TTTGCAAACTGCTGTTCTAGACTGTGTTCCCTGATCCATTCTGACATCTAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAAGAAGTTCTGAGAAGTaGGTGTGGTACATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNARSSEK*VWYMRA
Trigger: GGCCCTCATGTACCACACGCACTTCTCAGAACTTCT...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATAGAAGTTCTGAGAAGTaGGTGTGGTACATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHRSSEK*VWYMRA
Trigger: GGCCCTCATGTACCACACGCACTTCTCAGAACTTCT...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR GCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAGGCAGGCTGAAGGGGTaGAGGCGTGGGTTGGGACTC +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLGRLKG*RRGLGL
Trigger: GAGTCCCAACCCACGCCTGCACCCCTTCAGCCTGCC...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAATTAGATGTCAGAATGGATCAGGGAACACAGTCTAGAACAGCAGTTTGCAAAGGCAGGCTGAAGGGGTaGAGGCGTGGGTTGGGACTC +
Preference number: 4 (lower is better)
Translates to: KLDVRMDQGTQSRTAVCKGRLKG*RRGLGL
Trigger: GAGTCCCAACCCACGCCTGCACCCCTTCAGCCTGCC...TTTGCAAACTGCTGTTCTAGACTGTGTTCCCTGATCCATTCTGACATCTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATAAAGAAGCTGCCGAATaGAACGGCAAAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHKEAAE*NGKAQH
Trigger: GTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTT...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGGCCCTCGCCTGCCAGTaGTGCTGCAGGAGACGAGAC +
Preference number: 4 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLALACQ*CCRRRD
Trigger: GTCTCGTCTCCTGCAGCAGCACTGGCAGGCGAGGGC...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTATCCAGACAACAGGGCTaGCAGGACTACGGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLSRQQG*QDYGGP
Trigger: CGGGCCCCCGTAGTCCTGGCAGCCCTGTTGTCTGGA...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCACCAGAGAAAGAGTCCTaGTGTTTGGAGGTCGAGAGA +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNAPEKES*CLEVER
Trigger: TCTCTCGACCTCCAAACAGCAGGACTCTTTCTCTGG...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGCTTCTAGTGCATCTCTaGCCTCTCCGTGTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGLLVHL*PLRVGK
Trigger: CTTGCCAACACGGAGAGGGCAGAGATGCACTAGAAG...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATATTGCAGGGGACAGGTaGTGTAATTCCTGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADIAGDR*CNSCPE
Trigger: CTCTGGGCAGGAATTACAGCACCTGTCCCCTGCAAT...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCAGCCGAGCCCGGGCTaGATGACTCCTCTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPQPSPG*MTPLGE
Trigger: CTCCCCCAGAGGAGTCATCCAGCCCGGGCTCGGCTG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGATCCACATCCGGCCTaGACTCCAGCCCTGACACCC +
Preference number: 4 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNDPHPA*TPALTP
Trigger: GGGTGTCAGGGCTGGAGTCCAGGCCGGATGTGGATC...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTTGGGGAACCAGGTTGTaGGAGGTCCTAAAAGCGACA +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFWGTRL*EVLKAT
Trigger: TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCA...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATTGGGGAACCAGGTTGTaGGAGGTCCTAAAAGCGACA +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADWGTRL*EVLKAT
Trigger: TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCA...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAAGAACTATGGATGTGTaGGGAACCAGGTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNARTMDV*GTRLWE
Trigger: CTCCCACAACCTGGTTCCCCACACATCCATAGTTCT...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCAGAACTATGGATGTGTaGGGAACCAGGTTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFRTMDV*GTRLWE
Trigger: CTCCCACAACCTGGTTCCCCACACATCCATAGTTCT...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGTACCTGATATGGAATaGAAGCCAGGGTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNAVPDME*KPGCGL
Trigger: AAGCCCACACCCTGGCTTCCATTCCATATCAGGTAC...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATCTGGGCTGCAGACAGTaGAGCAGAGAGAAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNLGCRQ*SREKQK
Trigger: CTTCTGCTTCTCTCTGCTCCACTGTCTGCAGCCCAG...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGTTGCAGCAGGTACATaGGTTGGCTCATTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHVAAGT*VGSFSH
Trigger: GTGAGAGAATGAGCCAACCCATGTACCTGCTGCAAC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACCTGGGTCTGAGGACATaGGAGGGAGGAGCCATAAAA +
Preference number: 4 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDLGLRT*EGGAIK
Trigger: TTTTATGGCTCCTCCCTCCCATGTCCTCAGACCCAG...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTGGATGTCTCCATTTCTaGACTGTGCTCAAATTCACA +
Preference number: 4 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSGCLHF*TVLKFT
Trigger: TGTGAATTTGAGCACAGTCCAGAAATGGAGACATCC...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCACTGGTGAGCGAAGGATaGGAGCAGAGAACAGAGCTA +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISLVSEG*EQRTEL
Trigger: TAGCTCTGTTCTCTGCTCCCATCCTTCGCTCACCAG...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGACAGAAGATTCCTTTTaGAAGACTGAGAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMTEDSF*KTEKPS
Trigger: GCTGGGTTTCTCAGTCTTCCAAAAGGAATCTTCTGT...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
3UTR CAA 72 bp ATGTCTCCATTTCTGGACTGTGCTCAAATTCACACCTaGTATGACATGTGGGCAGAGGAGCTGGCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: MSPFLDCAQIHT*YDMWAEELAWR
Trigger: TCTCCAGGCCAGCTCCTCTGCCCACATGTCATACAAGGTGTGAATTTGAGCACAGTCCAGAAATGGAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGTTTCTCCTACTTTCCTaGGCAGAAATCTTATTCTTG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGFLLLS*AEILFL
Trigger: CAAGAATAAGATTTCTGCTCAGGAAAGTAGGAGAAA...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTCCGACTTATGAGGTATaGCGACAAATGTTAATAACA +
Preference number: 4 (lower is better)
Translates to: CTAQTVSALANGRDNKNPPTYEV*RQMLIT
Trigger: TGTTATTAACATTTGTCGTCATACCTCATAAGTCGG...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGCAGGGACCGACTTATaGGGTATGACGACAAATGTT +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHAGTDL*GMTTNV
Trigger: AACATTTGTCGTCATACCTCATAAGTCGGTCCCTGC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGTGCCTGATAATGACCTaGCAGTTTAAAAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWCLIMT*QFKREG
Trigger: TCCCTCTCTTTTAAACTGTCAGGTCATTATCAGGCA...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGTACGTCTGGGAGCCTTaGAAACCCAGTCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLYVWEP*KPSLVQ
Trigger: CTGAACCAGACTGGGTTTTCAAGGCTCCCAGACGTA...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACGGCTTATGGCCGCTCTaGCAGACTCGTATTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDGLWPL*QTRISQ
Trigger: TTGAGAAATACGAGTCTGTCAGAGCGGCCATAAGCC...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTAACACTCTCTTTATGTaGGCTAGACTCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSNTLFM*ARLQSP
Trigger: AGGACTCTGGAGTCTAGCTCACATAAAGAGAGTGTT...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGAGAGGAAGGGGAGGATaGAGGTCTTCTAGTGCATCT +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLRGRGG*RSSSAS
Trigger: AGATGCACTAGAAGACCTTCATCCTCCCCTTCCTCT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGCTATTTCTTTTCTCCTaGTGTGCAAATCTGATAGTG +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGLFLFS*CANLIV
Trigger: CACTATCAGATTTGCACATCAGGAGAAAAGAAATAG...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACTCCTGTGTTAAGTGCTaGCCCTTTGACCACAAAGGC +
Preference number: 4 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDSCVKC*PFDHKG
Trigger: GCCTTTGTGGTCAAAGGGTCAGCACTTAACACAGGA...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGAGCCTTGAAAGAAGCTaGCGAATGCAACGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGSLERS*RMQRQS
Trigger: GCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCACCAGAGACCCCAGTaGGAGCAACGGAGGACACGG +
Preference number: 4 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLHQRPQ*EQRRTR
Trigger: CCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTG...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGAGTGGGCGGAGGGCTaGTGTCGGGGGTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPEWAEG*CRGCSH
Trigger: GTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTC...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCATCTCTTTGGGCGAGCTaGAAAGTAGCCAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISSLWAS*KVAKPD
Trigger: GTCAGGTTTGGCTACTTTGCAGCTCGCCCAAAGAGA...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATCCAGAGAAAGAGTCCTaGTGTTTGGAGGTCGAGAGA +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADPEKES*CLEVER
Trigger: TCTCTCGACCTCCAAACAGCAGGACTCTTTCTCTGG...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCGGAGGAGCCATAAAATaGTGGAGAACAATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTGGAIK*WRTILK
Trigger: TTTTAAAATTGTTCTCCAGCATTTTATGGCTCCTCC...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATTCGTCTAGGCTGGAGTaGAGTGGTGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHSSRLE*SGAISA
Trigger: AGCCGAGATCGCACCACTGCACTCCAGCCTAGACGA...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCAGACGGAACGAGTCCTaGGGGTGGTTCGTCTGTAAC +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLRRNES*GWFVCN
Trigger: GTTACAGACGAACCACCCCCAGGACTCGTTCCGTCT...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTATGCAGGTGGTCCACTaGGGCTTCTTTAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFMQVVH*GFFRRE
Trigger: TTCTCTCCTAAAGAAGCCCCAGTGGACCACCTGCAT...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGATGCAGGTGGTCCACTaGGGCTTCTTTAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGMQVVH*GFFRRE
Trigger: TTCTCTCCTAAAGAAGCCCCAGTGGACCACCTGCAT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGGTACCTGATATGGAATaGAAGCCAGGGTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLVPDME*KPGCGL
Trigger: AAGCCCACACCCTGGCTTCCATTCCATATCAGGTAC...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGAAGAGTCCTGCTGTTTaGAGGTCGAGAGAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGKSPAV*RSRESD
Trigger: GTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGCTGGGTCTGAGGACATaGGAGGGAGGAGCCATAAAA +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLLGLRT*EGGAIK
Trigger: TTTTATGGCTCCTCCCTCCCATGTCCTCAGACCCAG...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCCCGTGTTGGCAAGGTTaGCATGAATGGGCCATTATT +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFPCWQG*HEWAII
Trigger: AATAATGGCCCATTCATGCCAACCTTGCCAACACGG...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGGCACTACCTGCCCATaGCTTCACAGGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNGTTCP*LHRSSQ
Trigger: CTGGCTGGACCTGTGAAGCCATGGGCAGGTAGTGCC...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp CACAGGTGCACATTAGGCAATATCTTTTTGGCACTATaGGTGGAAACAAGCCTGCTTGTCCCACCTCCAACC +
Preference number: 4 (lower is better)
Translates to: HRCTLGNIFLAL*VETSLLVPPPT
Trigger: GGTTGGAGGTGGGACAAGCAGGCTTGTTTCCACCAATAGTGCCAAAAAGATATTGCCTAATGTGCACCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp GGTGTGGAAAGCCAGCAAGGTTGTCTGAAATGTCTGTaGTCAGAACAGGGCTTCCCCTTCTCTGTCATGAAA +
Preference number: 4 (lower is better)
Translates to: GVESQQGCLKCL*SEQGFPFSVMK
Trigger: TTTCATGACAGAGAAGGGGAAGCCCTGTTCTGACAACAGACATTTCAGACAACCTTGCTGGCTTTCCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCTCATCCAGAAGTTCTaGGAAGTGCGTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFLIQKF*EVRVVH
Trigger: ATGTACCACACGCACTTCTCAGAACTTCTGGATGAG...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR TCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTGTCTTGATGGATGTTaGAGGGAAGTCTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHCLDGC*REVCRQ
Trigger: CTGTCTACAGACTTCCCTTCAACATCCATCAAGACA...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000620715.4
CDS-3UTR TCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCAGCCCTGACACCCTaGGCAGGGAGGAACCTCTAT +
Preference number: 4 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLPALTP*AGRNLY
Trigger: ATAGAGGTTCCTCCCTGCTCAGGGTGTCAGGGCTGG...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCCTCCAGTTTGGCGCTaGCCAGGTGCTGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPPPVWR*PGAAAA
Trigger: AGCTGCAGCAGCACCTGGTCAGCGCCAAACTGGAGG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTCAAAGTAGCCAAACCTaGCTACCAAAGGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSQSSQT*LPKVRM
Trigger: CATTCTTACCTTTGGTAGTCAGGTTTGGCTACTTTG...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGGGTGGCCAAATAAAATaGCTCTCAAGAGGGCACTAC +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLGGQIK*LSRGHY
Trigger: GTAGTGCCCTCTTGAGAGTCATTTTATTTGGCCACC...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp ACAACTTTTAGTGTTTCATTCCCCTCCAGTTTGGCGCTGACCAGGTGCTGCTGCATGGATAGTCTCACCTaGAGGTGGCCAAATAAAATG +
Preference number: 4 (lower is better)
Translates to: TTFSVSFPSSLALTRCCCMDSLT*RWPNKM
Trigger: CATTTTATTTGGCCACCTTCAGGTGAGACTATCCAT...GCAGCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGAAACACTAAAAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR TCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTCACGAAGGGAAGCGATaGGCATCACACAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDIHEGKR*ASHSRA
Trigger: GGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTG...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCCACCACGCCCGGCCCTaGCCTTGCTGTTTATTTAAT +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLHHARP*PCCLFN
Trigger: ATTAAATAAACAGCAAGGTCAGGGCCGGGCGTGGTG...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTTGCCCTCTGAGTCACTaGCGTGACTGCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTCPLSH*RDCSEG
Trigger: CCCCTCCGAGCAGTCACGGCAGTGACTCAGAGGGCA...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCGCGTGCCAGCTAACTTaGAGGTTCGAGAAACCTTGC +
Preference number: 4 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLACQLT*RFEKPC
Trigger: GCAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGC...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCTTGGCGCTGACCAGGTaGTGCTGCAGCTCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGLALTR*CCSSKS
Trigger: GCTTTTGGAGCTGCAGCAGCACCTGGTCAGCGCCAA...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCGAAGCCACTAATGCTTaGCCATGTCTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFEATNA*PCLHED
Trigger: ATCTTCATGGAGACATGGGCAAGCATTAGTGGCTTC...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATTGGACCAGGGGGAGATaGTCTCTCACTGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNWTRGR*SLTAGK
Trigger: CTTCCCTGCAGTGAGAGAGCATCTCCCCCTGGTCCA...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCACGGGTCAGTGCTTTaGCAAATACCAACAGGCATT +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFHGSVL*QIPTGI
Trigger: AATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTG...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGTCTCTTTGGGCGAGCTaGAAAGTAGCCAAACCTGAC +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLSLWAS*KVAKPD
Trigger: GTCAGGTTTGGCTACTTTGCAGCTCGCCCAAAGAGA...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGTCAGAAGACACTGTCTaGCACTATTTGAAATCTTTA +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGSEDTV*HYLKSL
Trigger: TAAAGATTTCAAATAGTGGCAGACAGTGTCTTCTGA...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTGCCCAACTTGCCACATaGTGTCTTACCCACGGAGGC +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVAQLAT*CLTHGG
Trigger: GCCTCCGTGGGTAAGACAGCATGTGGCAAGTTGGGC...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATGGCGGCAAATGCAGGTaGTCCACTGGGGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHGGKCR*STGASL
Trigger: TAAAGAAGCCCCAGTGGACCACCTGCATTTGCCGCC...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAGCAGGGAATGCTGGCTaGGCAGAGCCATCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLAGNAG*AEPSWW
Trigger: CCACCAAGATGGCTCTGCCCAGCCAGCATTCCCTGC...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTTGCACAGGAGGGGCATaGACCAGGGGGAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDICTGGA*TRGRCS
Trigger: AGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCA...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTAAACAAAACATTGTCTaGAAAGACACGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSKQNIV*KDTGSQ
Trigger: CTGGGATCCCGTGTCTTTCCAGACAATGTTTTGTTT...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATCTTGAAAACCCAGTCTaGTTCAGTTGCAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADLENPV*FSCSRY
Trigger: GTACCTGCTGCAACTGAACCAGACTGGGTTTTCAAG...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCCGTGTTGGCAAGGTTaGCATGAATGGGCCATTATT +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFPCWQG*HEWAII
Trigger: AATAATGGCCCATTCATGCCAACCTTGCCAACACGG...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTTCTAAGTCTTGTCTCTaGATCCTTCACAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFSKSCL*ILHSPH
Trigger: GTGAGGGCTGTGAAGGATCCAGAGACAAGACTTAGA...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCATGCACTCCTGCAAACTaGGATTTTCCTAATGGACGT +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNACTPAN*DFPNGR
Trigger: ACGTCCATTAGGAAAATCCCAGTTTGCAGGAGTGCA...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGGTCAGAGTGACAGATaGATGTTGAAGGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADGQSDR*MLKGSL
Trigger: CAGACTTCCCTTCAACATCCATCTGTCACTCTGACC...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR CCA 90 bp GGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGGGATTAGGTTGTATTaGTCTGGCACGAGGAATCAA +
Preference number: 4 (lower is better)
Translates to: GSQGVGLIPLSTGSNNNAGIRLY*SGTRNQ
Trigger: TTGATTCCTCGTGCCAGACCAATACAACCTAATCCC...TGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620715.4
CDS-3UTR CCA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGAAACTAAAAGTAGGTTaGGGATTAGGTTGTATTGGT +
Preference number: 4 (lower is better)
Translates to: STGSNNNADDVCGGGWWGKLKVG*GLGCIG
Trigger: ACCAATACAACCTAATCCCCAACCTACTTTTAGTTT...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620715.4
CDS-3UTR TCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGCTCATCCAGAAGTTCTaGGAAGTGCGTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLLIQKF*EVRVVH
Trigger: ATGTACCACACGCACTTCTCAGAACTTCTGGATGAG...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATGGATCATTCAGGAGCTaGCCCAAGACGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHGSFRS*PKTFWE
Trigger: TTCCCAGAACGTCTTGGGTCAGCTCCTGAATGATCC...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACTGTCTTGATGGATGTTaGAGGGAAGTCTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDCLDGC*REVCRQ
Trigger: CTGTCTACAGACTTCCCTTCAACATCCATCAAGACA...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000620715.4
CDS-3UTR TCA 90 bp AAATTAGATGTCAGAATGGATCAGGGAACACAGTCTAGAACAGCAGTTTGCAAACAGGACCAGAGGGCCTaGTCCCTGCAGTTTATGAGG +
Preference number: 4 (lower is better)
Translates to: KLDVRMDQGTQSRTAVCKQDQRA*SLQFMR
Trigger: CCTCATAAACTGCAGGGATCAGGCCCTCTGGTCCTG...TTTGCAAACTGCTGTTCTAGACTGTGTTCCCTGATCCATTCTGACATCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCCAGCCCTGACACCCTaGGCAGGGAGGAACCTCTAT +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPPALTP*AGRNLY
Trigger: ATAGAGGTTCCTCCCTGCTCAGGGTGTCAGGGCTGG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCAGCCCGGGGCCTGAGTaGGGCATTGTGTCATCTCTC +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPSPGPE*GIVSSL
Trigger: GAGAGATGACACAATGCCTCACTCAGGCCCCGGGCT...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGGCCAGCAAGGTTGTCTaGAATGTCTGTTGTCAGAAC +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLASKVV*NVCCQN
Trigger: GTTCTGACAACAGACATTTCAGACAACCTTGCTGGC...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGTATCTAAAAGAGCAGTaGTGTTGGTTCTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLYLKEQ*CWFLEP
Trigger: GGGCTCCAAGAACCAACATCACTGCTCTTTTAGATA...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTAAAATGCTGGACACTTaGCTCACTGCCAGAACAAAG +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFKMLDT*LTARTK
Trigger: CTTTGTTCTGGCAGTGAGTCAAGTGTCCAGCATTTT...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTAAACGTCTGCTCCTCTaGCGGAGAGAGGATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVKRLLL*RREDGQ
Trigger: TTGGCCATCCTCTCTCCGGCAGAGGAGCAGACGTTT...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTGGTTGGGACTCAGGCTaGCCTCTGAGTCACTGCCGT +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTGWDSG*PLSHCR
Trigger: ACGGCAGTGACTCAGAGGGCAGCCTGAGTCCCAACC...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTGAAGCCACTAATGCTTaGCCATGTCTCCATGAAGAT +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFEATNA*PCLHED
Trigger: ATCTTCATGGAGACATGGGCAAGCATTAGTGGCTTC...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGAGTTCTCTGAATCTTTaGAAAACATCTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWSSLNL*KTSPSL
Trigger: CAGTGAAGGAGATGTTTTGCAAAGATTCAGAGAACT...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTAGGGGAACCCCCACTTaGCTCTTCAAAGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVRGTPT*LFKGRS
Trigger: GCTTCTCCCTTTGAAGAGGCAAGTGGGGGTTCCCCT...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTTCACTGGTGGTAATGTaGGTGAAGGGCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDISLVVM*VKGDWA
Trigger: GGCCCAGTCGCCCTTCACCCACATTACCACCAGTGA...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAATTAGATGTCAGAATGGATCAGGGAACACAGTCTAGAACAGCAGTTTGCAAATCACTGGTGGTAATGTaGGTGAAGGGCGACTGGGCC +
Preference number: 4 (lower is better)
Translates to: KLDVRMDQGTQSRTAVCKSLVVM*VKGDWA
Trigger: GGCCCAGTCGCCCTTCACCCACATTACCACCAGTGA...TTTGCAAACTGCTGTTCTAGACTGTGTTCCCTGATCCATTCTGACATCTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTAACGAGTCCTGGGGGTaGTTCGTCTGTAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVNESWG*FVCNWL
Trigger: GAGCCAGTTACAGACGAACCACCCCCAGGACTCGTT...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCTGCACAGGAGGGGCATaGACCAGGGGGAGATGCTCT +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPCTGGA*TRGRCS
Trigger: AGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCA...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCATTTTGGCACTATTGGTaGAAACAAGCCTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISFWHYW*KQACLS
Trigger: GGACAAGCAGGCTTGTTTCCACCAATAGTGCCAAAA...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCAAATACTATTTACAACTaGGGAGGAGAAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISNTIYN*GGEAGE
Trigger: CTCCCCAGCTTCTCCTCCCCAGTTGTAAATAGTATT...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAAGGCCCAACAGGATCTaGGCTGCAGACAGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLRPNRI*AADSGA
Trigger: TGCTCCACTGTCTGCAGCCCAGATCCTGTTGGGCCT...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCATGCACTCCTGCAAACTaGGATTTTCCTAATGGACGT +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISCTPAN*DFPNGR
Trigger: ACGTCCATTAGGAAAATCCCAGTTTGCAGGAGTGCA...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp GTGCTTTGCCAAATACCAACAGGCATTATGGCATTTTaGTGGCCAGAGTCTGGGGTCTTGACTGAACAAGAG +
Preference number: 4 (lower is better)
Translates to: VLCQIPTGIMAF*WPESGVLTEQE
Trigger: CTCTTGTTCAGTCAAGACCCCAGACTCTGGCCACAAAAATGCCATAATGCCTGTTGGTATTTGGCAAAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp AAACCCAGTCTGGTTCAGTTGCAGCAGGTACATGGGTaGGCTCATTCTCTCACTTCTGCCCCTAAATTTGAA +
Preference number: 4 (lower is better)
Translates to: KPSLVQLQQVHG*AHSLTSAPKFE
Trigger: TTCAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACTGAACCAGACTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATAAAACTTGGCTAGCTTaGAAGGAGGCATCGATCTCT +
Preference number: 4 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNKTWLA*KEASIS
Trigger: AGAGATCGATGCCTCCTTTCAAGCTAGCCAAGTTTT...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCCTTAAAAGGGCCATCTaGGCTCTCTGCCTAACGTCC +
Preference number: 4 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGLKRAI*ALCLTS
Trigger: GGACGTTAGGCAGAGAGCTCAGATGGCCCTTTTAAG...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCATCTGGTCTTAATCCCTaGACAGAAAATGTGCACACA +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISSGLNP*TENVHT
Trigger: TGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGA...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTCAAAGTCGAGGGCTGTaGAAAGAACCACGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTQSRGL*KEPRWG
Trigger: CCCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTG...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp GAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTACATTAATCTTCAAATaGGCCAGGTTCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: EGETEREREREKPKPKAFTLIFK*ARFLCP
Trigger: AGGGCAAAGGAACCTGGCTCATTTGAAGATTAATGT...AAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTATTCTCACTCAGCTGGTaGGCGAAGGATGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLFSLSW*AKDGSR
Trigger: TCTGCTCCCATCCTTCGCTCACCAGCTGAGTGAGAA...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATAGAAGTTCTGAGAAGTaGGTGTGGTACATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHRSSEK*VWYMRA
Trigger: GGCCCTCATGTACCACACGCACTTCTCAGAACTTCT...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGAGGTTCGAGAAACCTTaGCCATCACCAAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLRFEKP*PSPKSE
Trigger: TTCAGACTTTGGTGATGGGCAAGGTTTCTCGAACCT...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTCTGACCAGGTGCTGCTaGAGCTCCAAAAGCACTGAC +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDILTRCC*SSKSTD
Trigger: GTCAGTGCTTTTGGAGCTGCAGCAGCACCTGGTCAG...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCGTTACACCTCACAGGTaGACATTAGGCAATATCTTT +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFVTPHR*TLGNIF
Trigger: AAAGATATTGCCTAATGTGCACCTGTGAGGTGTAAC...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTGGAACCAATCTGGTaGTATACAACTCTTCTGTGT +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHLEPIW*YTTLLC
Trigger: ACACAGAAGAGTTGTATAGCACCAGATTGGTTCCAA...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATATATCCCTTTTTAAGTaGAAAGTCGAGGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHISLFK*KVEGCE
Trigger: TTCACAGCCCTCGACTTTGCACTTAAAAAGGGATAT...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCAAGAGGGCACTACCTaGCCATGGCTTCACAGGTCC +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPQEGTT*PWLHRS
Trigger: GGACCTGTGAAGCCATGGGCAGGTAGTGCCCTCTTG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCATTGCAGGGGACAGGTaGTGTAATTCCTGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGIAGDR*CNSCPE
Trigger: CTCTGGGCAGGAATTACAGCACCTGTCCCCTGCAAT...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGGCCATGGGTACATGGTaGAAAAAGTTCATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLAMGTW*KKFMFS
Trigger: TGAGAACATGAACTTTTTGCACCATGTACCCATGGC...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACAAACAAAACATTGTCTaGAAAGACACGGGATCCCAG +
Preference number: 4 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDKQNIV*KDTGSQ
Trigger: CTGGGATCCCGTGTCTTTCCAGACAATGTTTTGTTT...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGTCCGTTTTGGAAGGATaGTTTCCCAGAGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLSVLEG*FPRERV
Trigger: GACTCTTTCTCTGGGAAACCATCCTTCCAAAACGGA...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCAACTGTAGTGACTTaGGGCAGAGGAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLPTVVT*GRGRGG
Trigger: TCCTCCCCTTCCTCTGCCCCAAGTCACTACAGTTGG...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GGCAGAACTATGGATGTGTGGGGAACCAGGTTGTGGGAGGTCCTAAAAGCGACATTGACCACAAAGGCATaGAACATTAATCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: GRTMDVWGTRLWEVLKATLTTKA*NINLQM
Trigger: CATTTGAAGATTAATGTTCCATGCCTTTGTGGTCAA...TGTCGCTTTTAGGACCTCCCACAACCTGGTTCCCCACACATCCATAGTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTTTCTCCTACTTTCCTaGGCAGAAATCTTATTCTTG +
Preference number: 4 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFFLLLS*AEILFL
Trigger: CAAGAATAAGATTTCTGCTCAGGAAAGTAGGAGAAA...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATAGCTTCTGGAGTTGCTaGAGGAGAGTCCTATTAGTG +
Preference number: 4 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHSFWSC*RRVLLV
Trigger: CACTAATAGGACTCTCCTTCAGCAACTCCAGAAGCT...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTCTCACAGTGAGAAGATaGACTTGGCCGCTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDILTVRR*TWPLSR
Trigger: CCTGGAAAGCGGCCAAGTTCATCTTCTCACTGTGAG...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGTCTGGTCTTAATCCCTaGACAGAAAATGTGCACACA +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLSGLNP*TENVHT
Trigger: TGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGA...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGATATCCCTTTTTAAGTaGAAAGTCGAGGGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGISLFK*KVEGCE
Trigger: TTCACAGCCCTCGACTTTGCACTTAAAAAGGGATAT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCATCCATTTCTGGACTGTaGTCAAATTCACACCTTGTA +
Preference number: 4 (lower is better)
Translates to: RRDREREGEREAKTKGISSISGL*SNSHLV
Trigger: TACAAGGTGTGAATTTGAGCACAGTCCAGAAATGGA...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATGCAGTTTGCAAACTGTaGTCTGTCAAGCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHAVCKL*SVKLWR
Trigger: TCTCCAGAGCTTGACAGAGCACAGTTTGCAAACTGC...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCCTAAAAGCGACAAGATaGGGCAGGTTTGCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGLKATR*GRFAWS
Trigger: ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAG...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGAGAGGGATGGGTCAGTaGAGGCCCATGGTTACCAGA +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCERGMGQ*RPMVTR
Trigger: TCTGGTAACCATGGGCCTCCACTGACCCATCCCTCT...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCAGAGGGATGGGTCAGTaGAGGCCCATGGTTACCAGA +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPRGMGQ*RPMVTR
Trigger: TCTGGTAACCATGGGCCTCCACTGACCCATCCCTCT...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATAGTGATGTTGGTTCTTaGAGCCCCCTTAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNSDVGS*SPLKRA
Trigger: GGCCCTTTTAAGGGGGCTCCAAGAACCAACATCACT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTACCTTGTATGACATGTaGGCAGAGGAGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPTLYDM*AEELAW
Trigger: CCAGGCCAGCTCCTCTGCCCACATGTCATACAAGGT...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTCAGAGTCTGGGGTCTTaGCTGAACAAGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTQSLGS*LNKSHL
Trigger: GAGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTG...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGGAGGTCGAGAGAGAGTaGCGTCAAGCAAGCGTAGTA +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEEVERE*RQASVV
Trigger: TACTACGCTTGCTTGACGTCACTCTCTCTCGACCTC...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGAGGTCGAGAGAGAGTaGCGTCAAGCAAGCGTAGTA +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPEVERE*RQASVV
Trigger: TACTACGCTTGCTTGACGTCACTCTCTCTCGACCTC...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTACCTGCCCAGAGAACTTaGAAGCTTACAGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLPAQRT*KLTVCS
Trigger: TGAGCACACTGTAAGCTTTCAAGTTCTCTGGGCAGG...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGAGCCTTGAAAGAAGCTaGCGAATGCAACGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLSLERS*RMQRQS
Trigger: GCTTTGCCGTTGCATTCGGCAGCTTCTTTCAAGGCT...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATAGTTCTCTGAATCTTTaGAAAACATCTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADSSLNL*KTSPSL
Trigger: CAGTGAAGGAGATGTTTTGCAAAGATTCAGAGAACT...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAAGTGATGTTGGTTCTTaGAGCCCCCTTAAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLSDVGS*SPLKRA
Trigger: GGCCCTTTTAAGGGGGCTCCAAGAACCAACATCACT...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTGACCACAAAGGCATaGAACATTAATCTTCAAATG +
Preference number: 4 (lower is better)
Translates to: EKERQRERGRERSQNQRHLTTKA*NINLQM
Trigger: CATTTGAAGATTAATGTTCCATGCCTTTGTGGTCAA...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATTACAATTCCACTCAGTaGAGGCAGAAACACAGCAGT +
Preference number: 4 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHYNSTQ*RQKHSS
Trigger: ACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTA...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTTGTCTTGATGGATGTTaGAGGGAAGTCTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVCLDGC*REVCRQ
Trigger: CTGTCTACAGACTTCCCTTCAACATCCATCAAGACA...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR TCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTAATTCACACCTTGTATaGCATGTGGGCAGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDINSHLV*HVGRGA
Trigger: AGCTCCTCTGCCCACATGTCATACAAGGTGTGAATT...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTATACAAAATCTCCCAGTaGCGAGGGATTCCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLYKISQ*RGIPQS
Trigger: TGACTGAGGAATCCCTCGTCACTGGGAGATTTTGTA...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGTACAAAATCTCCCAGTaGCGAGGGATTCCTCAGTCA +
Preference number: 4 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLYKISQ*RGIPQS
Trigger: TGACTGAGGAATCCCTCGTCACTGGGAGATTTTGTA...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCCAGGTTCCTTTGCCCTaGGAAATGTTCCGCTATGAG +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPQVPLP*EMFRYE
Trigger: CTCATAGCGGAACATTTCTCAGGGCAAAGGAACCTG...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTCAGGTTCCTTTGCCCTaGGAAATGTTCCGCTATGAG +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTQVPLP*EMFRYE
Trigger: CTCATAGCGGAACATTTCTCAGGGCAAAGGAACCTG...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGAGAAGTTCTGAGAAGTaGGTGTGGTACATGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCERSSEK*VWYMRA
Trigger: GGCCCTCATGTACCACACGCACTTCTCAGAACTTCT...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCAAAGAAGCTGCCGAATaGAACGGCAAAGCACAGCAC +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPKEAAE*NGKAQH
Trigger: GTGCTGTGCTTTGCCGTTGCATTCGGCAGCTTCTTT...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGGAGGACACGGGTCAGTaGTTTGCCAAATACCAACAG +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEEDTGQ*FAKYQQ
Trigger: CTGTTGGTATTTGGCAAAGCACTGACCCGTGTCCTC...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCTTGGGCCCTATAGGCTaGCTATGCCTGATAATGACC +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPLGPIG*LCLIMT
Trigger: GGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAA...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATTCAGAAGACACTGTCTaGCACTATTTGAAATCTTTA +
Preference number: 4 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADSEDTV*HYLKSL
Trigger: TAAAGATTTCAAATAGTGGCAGACAGTGTCTTCTGA...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATATTATGGCATTTTTGTaGCCAGAGTCTGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNIMAFL*PESGVL
Trigger: CAAGACCCCAGACTCTGGCCACAAAAATGCCATAAT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGAAACTAAAAGTAGGTTaGGGATTAGGTTGTATCTCT +
Preference number: 4 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGKLKVG*GLGCIS
Trigger: AGAGATACAACCTAATCCCCAACCTACTTTTAGTTT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGTTTAAAAGAGAGGGATaGGTCAGTGGAGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEFKREG*VSGGPW
Trigger: CCATGGGCCTCCACTGACCCATCCCTCTCTTTTAAA...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTTTTAAAAGAGAGGGATaGGTCAGTGGAGGCCCATGG +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPFKREG*VSGGPW
Trigger: CCATGGGCCTCCACTGACCCATCCCTCTCTTTTAAA...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGGTTGCAGCAGGTACATaGGTTGGCTCATTCTCTCAC +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEVAAGT*VGSFSH
Trigger: GTGAGAGAATGAGCCAACCCATGTACCTGCTGCAAC...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGGCCATTATTCAACTaGGGGTGGGATGTCTCCATT +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPGPLFN*GWDVSI
Trigger: AATGGAGACATCCCACCCCCAGTTGAATAATGGCCC...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTCAAGGTTGGCATGAATaGGCCATTATTCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: VYVTCYKREQNLTVSIDIQGWHE*AIIQLG
Trigger: CCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTATCTAAGTCTTGTCTCTaGATCCTTCACAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLSKSCL*ILHSPH
Trigger: GTGAGGGCTGTGAAGGATCCAGAGACAAGACTTAGA...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCGTAAAGCCTGCTAGCTaGAACTCACAGAAGATTGGA +
Preference number: 4 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGVKPAS*NSQKIG
Trigger: TCCAATCTTCTGTGAGTTCCAGCTAGCAGGCTTTAC...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
3UTR CAA 72 bp GCTCACAGGAAGGAATCGGCTCAGCTAGTCCAGAAATaGCTGCATTTCCCATATTACTTAGTTCTTTATTCA +
Preference number: 4 (lower is better)
Translates to: AHRKESAQLVQK*LHFPYYLVLYS
Trigger: TGAATAAAGAACTAAGTAATATGGGAAATGCAGCAATTTCTGGACTAGCTGAGCCGATTCCTTCCTGTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCCTCATCCAGAAGTTCTaGGAAGTGCGTGTGGTACAT +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPLIQKF*EVRVVH
Trigger: ATGTACCACACGCACTTCTCAGAACTTCTGGATGAG...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATATGGATAGTCTCACCTaGAGGTGGCCAAATAAAATG +
Preference number: 4 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNMDSLT*RWPNKM
Trigger: CATTTTATTTGGCCACCTTCAGGTGAGACTATCCAT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAAGGTTCGAGAAACCTTaGCCATCACCAAAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLRFEKP*PSPKSE
Trigger: TTCAGACTTTGGTGATGGGCAAGGTTTCTCGAACCT...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp AAATTAGATGTCAGAATGGATCAGGGAACACAGTCTAGAACAGCAGTTTGCAAAAATAAAACAAGACCCTaGCCAACTTGCCACATGCTG +
Preference number: 4 (lower is better)
Translates to: KLDVRMDQGTQSRTAVCKNKTRP*PTCHML
Trigger: CAGCATGTGGCAAGTTGGGCAGGGTCTTGTTTTATT...TTTGCAAACTGCTGTTCTAGACTGTGTTCCCTGATCCATTCTGACATCTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CCA 90 bp TATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATGACCTGAAACTAAAAGTAGGTTaGGGATTAGGTTGTATCTCT +
Preference number: 4 (lower is better)
Translates to: YLFAFFGPYRLPMPDNDLKLKVG*GLGCIS
Trigger: AGAGATACAACCTAATCCCCAACCTACTTTTAGTTT...CAGGTCATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCAGCAGGTACATGGGTTaGCTCATTCTCTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPSRYMG*LILSLL
Trigger: CAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCT...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGCACTCAAGCAAGGAGTaGAGGGCAGAGGTTTATCTA +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEHSSKE*RAEVYL
Trigger: TAGATAAACCTCTGCCCTCCACTCCTTGCTTGAGTG...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTTATCTAAAAGAGCAGTaGTGTTGGTTCTTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPYLKEQ*CWFLEP
Trigger: GGGCTCCAAGAACCAACATCACTGCTCTTTTAGATA...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTAACACTCTCTTTATGTaGGCTAGACTCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTNTLFM*ARLQSP
Trigger: AGGACTCTGGAGTCTAGCTCACATAAAGAGAGTGTT...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTATTATGGCATTTTTGTaGCCAGAGTCTGGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTIMAFL*PESGVL
Trigger: CAAGACCCCAGACTCTGGCCACAAAAATGCCATAAT...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGAATACTATTTACAACTaGGGAGGAGAAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCENTIYN*GGEAGE
Trigger: CTCCCCAGCTTCTCCTCCCCAGTTGTAAATAGTATT...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTGAGATTGACTCTTTATaGCTTATGGCCGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTEIDSL*LMAALT
Trigger: TGTCAGAGCGGCCATAAGCCATAAAGAGTCAATCTC...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGTAAAGCCTGCTAGCTaGAACTCACAGAAGATTGGA +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPVKPAS*NSQKIG
Trigger: TCCAATCTTCTGTGAGTTCCAGCTAGCAGGCTTTAC...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR TCA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTTTTCTCCTACTTTCCTaGGCAGAAATCTTATTCTTG +
Preference number: 4 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVFLLLS*AEILFL
Trigger: CAAGAATAAGATTTCTGCTCAGGAAAGTAGGAGAAA...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR GCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGGCCATGGGTACATGGTaGAAAAAGTTCATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEAMGTW*KKFMFS
Trigger: TGAGAACATGAACTTTTTGCACCATGTACCCATGGC...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGTCTTTTTGGCACTATTaGTGGAAACAAGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCESFWHY*WKQACL
Trigger: CAAGCAGGCTTGTTTCCACCAATAGTGCCAAAAAGA...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCGTTACACCTCACAGGTaGACATTAGGCAATATCTTT +
Preference number: 4 (lower is better)
Translates to: RIYKTERLKIYLAQHATPVTPHR*TLGNIF
Trigger: AAAGATATTGCCTAATGTGCACCTGTGAGGTGTAAC...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTTCTTTTCTCCTGATGTaGAAATCTGATAGTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPSFLLM*KSDSGS
Trigger: TGAGCCACTATCAGATTTGCACATCAGGAGAAAAGA...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCCAAAGGTAAGAATGTaGATACACAAATGTCACCTA +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPPKVRM*IHKCHL
Trigger: TAGGTGACATTTGTGTATCCACATTCTTACCTTTGG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGCCAAAGGTAAGAATGTaGATACACAAATGTCACCTA +
Preference number: 4 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEPKVRM*IHKCHL
Trigger: TAGGTGACATTTGTGTATCCACATTCTTACCTTTGG...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTTATTTGGAACCAATCTaGTGCTATACAACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPYLEPI*CYTTLL
Trigger: CAGAAGAGTTGTATAGCACCAGATTGGTTCCAAATA...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCCTGAACAGAAAATGTaGACACATCCATTAACTATT +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPPEQKM*THPLTI
Trigger: AATAGTTAATGGATGTGTGCACATTTTCTGTTCAGG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTCCTGAACAGAAAATGTaGACACATCCATTAACTATT +
Preference number: 4 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTPEQKM*THPLTI
Trigger: AATAGTTAATGGATGTGTGCACATTTTCTGTTCAGG...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR GCA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGAGGAGCCATAAAATaGTGGAGAACAATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPGGAIK*WRTILK
Trigger: TTTTAAAATTGTTCTCCAGCATTTTATGGCTCCTCC...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS CCA 90 bp CCTGCTCCCCGCTCTCCAGCACCTCCATGGCGGTGCGGGCCGCGCTaGGCCGAGGATGCTAAGCGCAGGAGGGGACGCGCAGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: PAPRSPAPPWRCGPR*AEDAKRRRGRAELP
Trigger: AGGCAGCTCTGCGCGTCCCCTCCTGCGCTTAGCATCCTCGGCCCAGCGCGGCCCGCACCGCCATGGAGGTGCTGGAGAGCGGGGAGCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
ENST00000616381.4
ENST00000620715.4
CDS GCA 90 bp GGCTCTGACAGCTCGCTCAGCTTGCGGTCCCACTGCAGCACGCCCTaGTCCCCGCTCTCCAGCACCTCCATGGCGGTGCGGGCCGCGCTG +
Preference number: 5 (lower is better)
Translates to: GSDSSLSLRSHCSTP*SPLSSTSMAVRAAL
Trigger: CAGCGCGGCCCGCACCGCCATGGAGGTGCTGGAGAGCGGGGAGCAGGGCGTGCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTCAGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
ENST00000616381.4
ENST00000620715.4
CDS GCA 90 bp CGCGCTGGGCCGAGGATGCTAAGCGCAGGAGGGGACGCGCAGAGCTaGCTCGGACCGGCAAGGTTCCTCTCTCTCCGCGTGTGCTTGCGT +
Preference number: 5 (lower is better)
Translates to: RAGPRMLSAGGDAQS*LGPARFLSLRVCLR
Trigger: ACGCAAGCACACGCGGAGAGAGAGGAACCTTGCCGGTCCGAGGCAGCTCTGCGCGTCCCCTCCTGCGCTTAGCATCCTCGGCCCAGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
ENST00000616381.4
ENST00000620715.4
CDS TCA 90 bp GACATGTACCGTGTGGTACATGAGGGCCTCGCCGTCCCCGGGCTCTaGCAGCTCGCTCAGCTTGCGGTCCCACTGCAGCACGCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: DMYRVVHEGLAVPGL*QLAQLAVPLQHALL
Trigger: GAGCAGGGCGTGCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTCAGAGCCCGGGGACGGCGAGGCCCTCATGTACCACACGGTACATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468127.1
CDS-3UTR CAA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATAGGGCCCGTAGCCTaGAAAGAAGCTGCCGAATGC +
Preference number: 5 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQIGPVA*KEAAEC
Trigger: GCATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTAT...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCCAGAGTCTGGGGTCTaGACTGAACAAGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVPESGV*TEQEPS
Trigger: AGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTGG...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTAGGGCCTGCTCAGCATaGTTTAAAAAGGGTCACTCA +
Preference number: 5 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVRACSA*FKKGHS
Trigger: TGAGTGACCCTTTTTAAACAATGCTGAGCAGGCCCT...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGATCCTGCCCAGAGAACTaGAAAGCTTACAGTGTGCTC +
Preference number: 5 (lower is better)
Translates to: APRGQSGRRAAVGGVHTRSCPEN*KAYSVL
Trigger: GAGCACACTGTAAGCTTTCAAGTTCTCTGGGCAGGA...TCTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS GCA 90 bp CGCGTGTCTGTAGTTTTGCACTTGGAAAGCAAACGTCTGCTCCTCTaGCGGAGAGAGGATGGCCAAGCGCTCCCGTCCGGTGTCCTCGGA +
Preference number: 5 (lower is better)
Translates to: RVSVVLHLESKRLLL*RREDGQALPSGVLG
Trigger: TCCGAGGACACCGGACGGGAGCGCTTGGCCATCCTCTCTCCGGCAGAGGAGCAGACGTTTGCTTTCCAAGTGCAAAACTACAGACACGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
CDS CCA 90 bp TTTGCACTTGGAAAGCAAACGTCTGCTCCTCTGCCGGAGAGAGGATaGCCAAGCGCTCCCGTCCGGTGTCCTCGGAGATCCGAGAATCCC +
Preference number: 5 (lower is better)
Translates to: FALGKQTSAPLPERG*PSAPVRCPRRSENP
Trigger: GGGATTCTCGGATCTCCGAGGACACCGGACGGGAGCGCTTGGCCATCCTCTCTCCGGCAGAGGAGCAGACGTTTGCTTTCCAAGTGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
CDS-3UTR CAA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGAGGCTCGCAGAAAACTaGGCTAGCTTGAAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LLSGVFTPETPVRATEDTRLAEN*ASLKGG
Trigger: GCCTCCTTTCAAGCTAGCCAAGTTTTCTGCGAGCCT...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGAAAAATGCTGGACACTaGACTCACTGCCAGAACAAA +
Preference number: 5 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQKNAGH*THCQNK
Trigger: TTTGTTCTGGCAGTGAGTCAAGTGTCCAGCATTTTT...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS GCA 90 bp CTCGGACCGGCAAGGTTCCTCTCTCTCCGCGTGTGCTTGCGTGTGTaGGCGCGCGTGTCTGTAGTTTTGCACTTGGAAAGCAAACGTCTG +
Preference number: 5 (lower is better)
Translates to: LGPARFLSLRVCLRV*ARVSVVLHLESKRL
Trigger: CAGACGTTTGCTTTCCAAGTGCAAAACTACAGACACGCGCGCGCACACACGCAAGCACACGCGGAGAGAGAGGAACCTTGCCGGTCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
ENST00000620715.4
CDS-3UTR CAA 90 bp ACAACTTTTAGTGTTTCATTCCCCTCCAGTTTGGCGCTGACCAGGTGCTGCTGCGGGTGCAGGCGTGGGTaGGGACTCAGGCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: TTFSVSFPSSLALTRCCCGCRRG*GLRLPS
Trigger: AGAGGGCAGCCTGAGTCCCAACCCACGCCTGCACCC...GCAGCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGAAACACTAAAAGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616381.4
CDS-3UTR CAA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGCCTTCTCCTCTGATTTaGACAGGGGCAATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: LLSGVFTPETPVRATEDTPSPLI*TGAIWW
Trigger: CCACCAAATTGCCCCTGTCAAAATCAGAGGAGAAGG...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAGGGGCCCCAGGATAGGGCCCGTAGCCTaGAAAGAAGCTGCCGAATGC +
Preference number: 5 (lower is better)
Translates to: KLWRIPSDAAVQWMRGPRIGPVA*KEAAEC
Trigger: GCATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTAT...CCTGGGGCCCCTCATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp CCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTTTAGGCAATATCTTTTaGGCACTATTGGTGGAAACA +
Preference number: 5 (lower is better)
Translates to: PARAPRGQSGRRAAVGGVLGNIF*ALLVET
Trigger: TGTTTCCACCAATAGTGCCAAAAAGATATTGCCTAA...AACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGTCTGCCTCTACGCTTTaGCTGGGTCTGAGGACATGG +
Preference number: 5 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGSASTL*LGLRTW
Trigger: CCATGTCCTCAGACCCAGCAAAAGCGTAGAGGCAGA...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GGATGCAGGCTCCCTTCTGCACAGGAGGGGCATGGACCAGGGGGAGATGCTCTCAAGGTTCCACCTCCATaGACACACTCTTCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: GCRLPSAQEGHGPGGDALKVPPP*THSSLR
Trigger: TCTCAGAGAAGAGTGTGTCAATGGAGGTGGAACCTT...GAGAGCATCTCCCCCTGGTCCATGCCCCTCCTGTGCAGAAGGGAGCCTGCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGTTAGGTTGTATCTCTTaGGGCGAGCTGCAAAGTAGC +
Preference number: 5 (lower is better)
Translates to: LLSGVFTPETPVRATEDTLGCIS*GELQSS
Trigger: GCTACTTTGCAGCTCGCCCAAAGAGATACAACCTAA...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GGCTCCCAGGGGGCAGAGTGGGCGGAGGGCTGCTGTCGGGGGTGTTCACACCAGACATCCATTAACTATTaGGAACCAATCTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: GSQGAEWAEGCCRGCSHQTSINY*EPIWCY
Trigger: ATAGCACCAGATTGGTTCCAAATAGTTAATGGATGT...CTGGTGTGAACACCCCCGACAGCAGCCCTCCGCCCACTCTGCCCCCTGGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CTGCTGTCGGGGGTGTTCACACCAGAGACCCCAGTGCGAGCAACGGAGGACACGGCTCAAATTCACACCTaGTATGACATGTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LLSGVFTPETPVRATEDTAQIHT*YDMWAE
Trigger: CTCTGCCCACATGTCATACAAGGTGTGAATTTGAGC...CGTGTCCTCCGTTGCTCGCACTGGGGTCTCTGGTGTGAACACCCCCGACAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACGGGTGCAGGCGTGGGTaGGGACTCAGGCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDGCRRG*GLRLPS
Trigger: AGAGGGCAGCCTGAGTCCCAACCCACGCCTGCACCC...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp TGCAGGAGACGAGACGATCCAGCGAGGGCTCCCAGGGGGCAGAGTGGGCGGAGGGGTAAAGAGTCACCCTaGTTTTCCGTATCTATAAAA +
Preference number: 5 (lower is better)
Translates to: CRRRDDPARAPRGQSGRRGKESP*FSVSIK
Trigger: TTTTATAGATACGGAAAACAAGGGTGACTCTTTACC...CCTCCGCCCACTCTGCCCCCTGGGAGCCCTCGCTGGATCGTCTCGTCTCCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGTCCTGCCCAGAGAACTaGAAAGCTTACAGTGTGCTC +
Preference number: 5 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGSCPEN*KAYSVL
Trigger: GAGCACACTGTAAGCTTTCAAGTTCTCTGGGCAGGA...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCTCCACCTCATCGTCATaGAAGCTGTCACTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTSTSSS*KLSLVV
Trigger: TACCACCAGTGACAGCTTCAATGACGATGAGGTGGA...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGTGCGTGCCAGCTAACTaGCAGGTTCGAGAAACCTTG +
Preference number: 5 (lower is better)
Translates to: STGSNNNADDVCGGGWWGCVPAN*QVRETL
Trigger: CAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGCA...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCACACGGGTCAGTGCTTaGCCAAATACCAACAGGCAT +
Preference number: 5 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTTRVSA*PNTNRH
Trigger: ATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp TGCACAGCTCAGACAGTCTCCGCCCTGGCTAATGGGAGGGACAACAAGAACCCTAGTGAGAAGATGAACTaGGCCGCTTTCCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: CTAQTVSALANGRDNKNPSEKMN*AAFQAG
Trigger: TCCAGCCTGGAAAGCGGCCAAGTTCATCTTCTCACT...AGGGTTCTTGTTGTCCCTCCCATTAGCCAGGGCGGAGACTGTCTGAGCTGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTCTCCAGACACAAACTTaGAGGGACCCCAGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSLQTQT*RDPRAP
Trigger: AGGAGCCCTGGGGTCCCTCAAAGTTTGTGTCTGGAG...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330387.11
CDS-3UTR CAA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGTCTGCCTCTACGCTTTaGCTGGGTCTGAGGACATGG +
Preference number: 5 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWSASTL*LGLRTW
Trigger: CCATGTCCTCAGACCCAGCAAAAGCGTAGAGGCAGA...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGAAGGTTCCACCTCCATaGACACACTCTTCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: STGSNNNADDVCGGGWWGKVPPP*THSSLR
Trigger: TCTCAGAGAAGAGTGTGTCAATGGAGGTGGAACCTT...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CAA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATGGGTGCAGGCGTGGGTaGGGACTCAGGCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHGCRRG*GLRLPS
Trigger: AGAGGGCAGCCTGAGTCCCAACCCACGCCTGCACCC...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGCGTGCCAGCTAACTaGCAGGTTCGAGAAACCTTG +
Preference number: 5 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQCVPAN*QVRETL
Trigger: CAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGCA...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGTCATTCCCCTCCAGTTaGGCGCTGACCAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLSFPSS*ALTRCC
Trigger: GCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGA...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGTGTGGGGAACCAGGTaGTGGGAGGTCCTAAAAGCG +
Preference number: 5 (lower is better)
Translates to: EKERQRERGRERSQNQRHVWGTR*WEVLKA
Trigger: CGCTTTTAGGACCTCCCACAACCTGGTTCCCCACAC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GAAAGAGTCCTGCTGTTTGGAGGTCGAGAGAGAGTGACGTCAAGCAAGCGTAGTCCCAGTCTGGTTCAGTaGCAGCAGGTACATGGGTTG +
Preference number: 5 (lower is better)
Translates to: ERVLLFGGRERVTSSKRSPSLVQ*QQVHGL
Trigger: CAACCCATGTACCTGCTGCAACTGAACCAGACTGGG...ACTACGCTTGCTTGACGTCACTCTCTCTCGACCTCCAAACAGCAGGACTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGCTACGTCTGGGAGCCTaGAAAACCCAGTCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWLRLGA*KTQSGS
Trigger: TGAACCAGACTGGGTTTTCAAGGCTCCCAGACGTAG...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp TGCTCCAGCACGAAGGGAAGCGATGAGCATCACACAGCAGGGCCATTGCAGGGGTACATAGATTCCGTTTaGGAAGGATGGTTTCCCAGA +
Preference number: 5 (lower is better)
Translates to: CSSTKGSDEHHTAGPLQGYIDSV*EGWFPR
Trigger: TCTGGGAAACCATCCTTCCAAAACGGAATCTATGTA...CCCCTGCAATGGCCCTGCTGTGTGATGCTCATCGCTTCCCTTCGTGCTGGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGGGGAGTCTAAGAGGCCACTaGGTGGGGAAAACAAATCCA +
Preference number: 5 (lower is better)
Translates to: STGSNNNADDVCGGGWWGSLRGH*VGKTNP
Trigger: TGGATTTGTTTTCCCCACCAAGTGGCCTCTTAGACT...CCCCCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGTGGATGAAGGTTCCACCTCCATaGACACACTCTTCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: LCSVKLWRIPSDAAVQWMKVPPP*THSSLR
Trigger: TCTCAGAGAAGAGTGTGTCAATGGAGGTGGAACCTT...CATCCACTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp TGCAAACTGTGCTCTGTCAAGCTCTGGAGAATTCCCAGTGATGCCGCAGTCCAGCCTTCTCCTCTGATTTaGACAGGGGCAATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: CKLCSVKLWRIPSDAAVQPSPLI*TGAIWW
Trigger: CCACCAAATTGCCCCTGTCAAAATCAGAGGAGAAGG...CTGGACTGCGGCATCACTGGGAATTCTCCAGAGCTTGACAGAGCACAGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp CTAAGTACAGGCTCCAATAACAATGCAGATGACGTGTGTGGGGGTGGGTGGTGGTGTCTGAAATGTCTGTaGTCAGAACAGGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: LSTGSNNNADDVCGGGWWCLKCL*SEQGFP
Trigger: GGGGAAGCCCTGTTCTGACAACAGACATTTCAGACA...CCACCACCCACCCCCACACACGTCATCTGCATTGTTATTGGAGCCTGTACTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCAAAAATGCTGGACACTaGACTCACTGCCAGAACAAA +
Preference number: 5 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTKNAGH*THCQNK
Trigger: TTTGTTCTGGCAGTGAGTCAAGTGTCCAGCATTTTT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTGCTCAAATTCACACCTaGTATGACATGTGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSAQIHT*YDMWAE
Trigger: CTCTGCCCACATGTCATACAAGGTGTGAATTTGAGC...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGATAGGGCCCGTAGCCTaGAAAGAAGCTGCCGAATGC +
Preference number: 5 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLIGPVA*KEAAEC
Trigger: GCATTCGGCAGCTTCTTTCAAGGCTACGGGCCCTAT...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGATCTCTTCAGTGTGGTaGCTAGCAGGAAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGISSVW*LAGSLG
Trigger: GCCGAGGCTTCCTGCTAGCAACCACACTGAAGAGAT...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS TCA 90 bp TCCTGGGGGTGGTTCGTCTGTAACTGGCTCTGTCTTGATGGATGTTaGAGGGAAGTCTGTAGACAGGTACCATTTCTCACTTTCCACCTC +
Preference number: 5 (lower is better)
Translates to: SWGWFVCNWLCLDGC*REVCRQVPFLTFHL
Trigger: GAGGTGGAAAGTGAGAAATGGTACCTGTCTACAGACTTCCCTTCAACATCCATCAAGACAGAGCCAGTTACAGACGAACCACCCCCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000420629.1
ENST00000452463.5
ENST00000456390.5
ENST00000458726.5
ENST00000620715.4
CDS-3UTR CAA 90 bp AGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATTTCACCAGAGTCTGGGGTCTaGACTGAACAAGAGCCATCT +
Preference number: 5 (lower is better)
Translates to: RRDREREGEREAKTKGISPESGV*TEQEPS
Trigger: AGATGGCTCTTGTTCAGTCAAGACCCCAGACTCTGG...TGAAATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACGGCATTATGGCATTTTaGTGGCCAGAGTCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDGIMAF*WPESGV
Trigger: GACCCCAGACTCTGGCCACAAAAATGCCATAATGCC...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATCCTCAGGCATTGCACTaGCGGCCTGAGAATATGAAC +
Preference number: 5 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADPQALH*RPENMN
Trigger: GTTCATATTCTCAGGCCGCAAGTGCAATGCCTGAGG...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATAGTGAGAAGATGAACTaGGCCGCTTTCCAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADSEKMN*AAFQAG
Trigger: TCCAGCCTGGAAAGCGGCCAAGTTCATCTTCTCACT...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAGAGACCCCAGTGCGAGCAACGGAGGACACGGGTCAGTGCTTTGCCAAATACCACATCCATTAACTATTaGGAACCAATCTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: QRPQCEQRRTRVSALPNTTSINY*EPIWCY
Trigger: ATAGCACCAGATTGGTTCCAAATAGTTAATGGATGT...GGTATTTGGCAAAGCACTGACCCGTGTCCTCCGTTGCTCGCACTGGGGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTCTAATTTTGCCCATATaGGTGTCAAATCTCATCCCC +
Preference number: 5 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSLILPI*VSNLIP
Trigger: GGGGATGAGATTTGACACCAATATGGGCAAAATTAG...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATCCTCAGGCATTGCACTaGCGGCCTGAGAATATGAAC +
Preference number: 5 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNPQALH*RPENMN
Trigger: GTTCATATTCTCAGGCCGCAAGTGCAATGCCTGAGG...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATTGTCTGAAATGTCTGTaGTCAGAACAGGGCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADCLKCL*SEQGFP
Trigger: GGGGAAGCCCTGTTCTGACAACAGACATTTCAGACA...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCATCTTTTTGCCTTCTTaGGGCCCTATAGGCTGCCTA +
Preference number: 5 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFIFLPS*GPIGCL
Trigger: TAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGAT...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATAAAAGAGCAGTGATGTaGGTTCTTGGAGCCCCCTTA +
Preference number: 5 (lower is better)
Translates to: EKERQRERGRERSQNQRHKRAVM*VLGAPL
Trigger: TAAGGGGGCTCCAAGAACCAACATCACTGCTCTTTT...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCTTAAGTGCTGACCCTTaGACCACAAAGGCATGGAAC +
Preference number: 5 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLSADP*TTKAWN
Trigger: GTTCCATGCCTTTGTGGTCAAAGGGTCAGCACTTAA...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATTCCACCTCATCGTCATaGAAGCTGTCACTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNSTSSS*KLSLVV
Trigger: TACCACCAGTGACAGCTTCAATGACGATGAGGTGGA...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000330387.11
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CAA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATCCTTCTCCTCTGATTTaGACAGGGGCAATTTGGTGG +
Preference number: 5 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNPSPLI*TGAIWW
Trigger: CCACCAAATTGCCCCTGTCAAAATCAGAGGAGAAGG...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATACACGGGTCAGTGCTTaGCCAAATACCAACAGGCAT +
Preference number: 5 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNTRVSA*PNTNRH
Trigger: ATGCCTGTTGGTATTTGGCAAAGCACTGACCCGTGT...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGTTAGGTTGTATCTCTTaGGGCGAGCTGCAAAGTAGC +
Preference number: 5 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLLGCIS*GELQSS
Trigger: GCTACTTTGCAGCTCGCCCAAAGAGATACAACCTAA...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp ACCAGGTTGTGGGAGGTCCTAAAAGCGACAAGATGGGGCAGGTTTGCCTGGAGTGGTAAAGAGTCACCCTaGTTTTCCGTATCTATAAAA +
Preference number: 5 (lower is better)
Translates to: TRLWEVLKATRWGRFAWSGKESP*FSVSIK
Trigger: TTTTATAGATACGGAAAACAAGGGTGACTCTTTACC...ACTCCAGGCAAACCTGCCCCATCTTGTCGCTTTTAGGACCTCCCACAACCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAATATCCCTTTTTAAGTGCAAAGTCGAGGGCTGTGAAAAGAACCACGGTGGGGGGGTCACTCACAGTTTaGTCAAAGAGTGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: QYPFLSAKSRAVKRTTVGGSLTV*SKSAGV
Trigger: AACACCAGCACTCTTTGACAAAACTGTGAGTGACCC...CCCCACCGTGGTTCTTTTCACAGCCCTCGACTTTGCACTTAAAAAGGGATATTG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS TCA 90 bp TCCATTGACACACTCTTCTCTGAGAGGAAAGGATCATTCAGGAGCTaGCCCAAGACGTTCTGGGAAAACTCATCCAGAAGTTCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: SIDTLFSERKGSFRS*PKTFWENSSRSSEK
Trigger: CTTCTCAGAACTTCTGGATGAGTTTTCCCAGAACGTCTTGGGTCAGCTCCTGAATGATCCTTTCCTCTCAGAGAAGAGTGTGTCAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000458726.5
ENST00000616381.4
ENST00000620715.4
CDS-3UTR CAA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTTCATTCCCCTCCAGTTaGGCGCTGACCAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPSFPSS*ALTRCC
Trigger: GCAGCACCTGGTCAGCGCCAAACTGGAGGGGAATGA...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCATCTCTTCAGTGTGGTaGCTAGCAGGAAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGISSVW*LAGSLG
Trigger: GCCGAGGCTTCCTGCTAGCAACCACACTGAAGAGAT...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAAGGTTGGCATGAATGGGCCATTATTCAACTGGGGGTGGGATGTCTCCATTTCCTTCTGCCCCTAAATTaGAAACCTTTCCTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: QGWHEWAIIQLGVGCLHFLLPLN*KPFLPH
Trigger: ATGAGGAAGGAAAGGTTTCAAATTTAGGGGCAGAAG...GAAATGGAGACATCCCACCCCCAGTTGAATAATGGCCCATTCATGCCAACCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATAGTCTAAGAGGCCACTaGGTGGGGAAAACAAATCCA +
Preference number: 5 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNSLRGH*VGKTNP
Trigger: TGGATTTGTTTTCCCCACCAAGTGGCCTCTTAGACT...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGTTGCAGCAGGTACATGGGTTGGCTCATTCTCTCACTTCTGCCCCTAAATTTGGCTCCAAGTTCTCAGTaGAACAAGACTCCACTTTTT +
Preference number: 5 (lower is better)
Translates to: SCSRYMGWLILSLLPLNLAPSSQ*NKTPLF
Trigger: AAAAAGTGGAGTCTTGTTCAACTGAGAACTTGGAGC...CAAATTTAGGGGCAGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTGCAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGCTCCAAGTTCTCAGTaGAACAAGACTCCACTTTTT +
Preference number: 5 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADAPSSQ*NKTPLF
Trigger: AAAAAGTGGAGTCTTGTTCAACTGAGAACTTGGAGC...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGGTGTGGGGAACCAGGTaGTGGGAGGTCCTAAAAGCG +
Preference number: 5 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEVWGTR*WEVLKA
Trigger: CGCTTTTAGGACCTCCCACAACCTGGTTCCCCACAC...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATAGGCTCGCAGAAAACTaGGCTAGCTTGAAAGGAGGC +
Preference number: 5 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNRLAEN*ASLKGG
Trigger: GCCTCCTTTCAAGCTAGCCAAGTTTTCTGCGAGCCT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATCTACGTCTGGGAGCCTaGAAAACCCAGTCTGGTTCA +
Preference number: 5 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNLRLGA*KTQSGS
Trigger: TGAACCAGACTGGGTTTTCAAGGCTCCCAGACGTAG...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACCTAATTTTGCCCATATaGGTGTCAAATCTCATCCCC +
Preference number: 5 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDLILPI*VSNLIP
Trigger: GGGGATGAGATTTGACACCAATATGGGCAAAATTAG...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAATTAGATGTCAGAATGGATCAGGGAACACAGTCTAGAACAGCAGTTTGCAAAAAGACCCTGCCCAACTaGCCACATGCTGTCTTACCC +
Preference number: 5 (lower is better)
Translates to: KLDVRMDQGTQSRTAVCKKTLPN*PHAVLP
Trigger: GGGTAAGACAGCATGTGGCAAGTTGGGCAGGGTCTT...TTTGCAAACTGCTGTTCTAGACTGTGTTCCCTGATCCATTCTGACATCTAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp TTGCATTACATTACTCATACAATTCCACTCAGTGGAGGCAGAAACACAGCAGTTTCCACCTCATCGTCATaGAAGCTGTCACTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: LHYITHTIPLSGGRNTAVSTSSS*KLSLVV
Trigger: TACCACCAGTGACAGCTTCAATGACGATGAGGTGGA...AACTGCTGTGTTTCTGCCTCCACTGAGTGGAATTGTATGAGTAATGTAATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATGCAGAAATCTTATTCTaGATCTTCCTCCGAATTTTC +
Preference number: 5 (lower is better)
Translates to: EKERQRERGRERSQNQRHAEILF*IFLRIF
Trigger: GAAAATTCGGAGGAAGATCAAGAATAAGATTTCTGC...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GTCTACGTAACCTGTTACAAAAGAGAGCAAAACCTAACTGTCAGCATAGACATTTGCGTGCCAGCTAACTaGCAGGTTCGAGAAACCTTG +
Preference number: 5 (lower is better)
Translates to: VYVTCYKREQNLTVSIDICVPAN*QVRETL
Trigger: CAAGGTTTCTCGAACCTGCAAGTTAGCTGGCACGCA...AATGTCTATGCTGACAGTTAGGTTTTGCTCTCTTTTGTAACAGGTTACGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTCCCAGTCTGGTTCAGTaGCAGCAGGTACATGGGTTG +
Preference number: 5 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTPSLVQ*QQVHGL
Trigger: CAACCCATGTACCTGCTGCAACTGAACCAGACTGGG...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp GAGAAGGAGAGACAGAGAGAGAGAGGGAGAGAGAGAAGCCAAAACCAAAGGCATACTGTCTGCCACTATTaGAAATCTTTAGAGCTAATC +
Preference number: 5 (lower is better)
Translates to: EKERQRERGRERSQNQRHTVCHY*KSLELI
Trigger: GATTAGCTCTAAAGATTTCAAATAGTGGCAGACAGT...ATGCCTTTGGTTTTGGCTTCTCTCTCTCCCTCTCTCTCTCTGTCTCTCCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS TCA 90 bp AGGGAAGTCTGTAGACAGGTACCATTTCTCACTTTCCACCTCATATaGGAAAAACACATACGCAGTTGGTCCTTGAACAACACGGGTTTT +
Preference number: 5 (lower is better)
Translates to: REVCRQVPFLTFHLI*EKHIRSWSLNNTGF
Trigger: AAAACCCGTGTTGTTCAAGGACCAACTGCGTATGTGTTTTTCTCATATGAGGTGGAAAGTGAGAAATGGTACCTGTCTACAGACTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420629.1
CDS-3UTR CAA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATAAGGTTCCACCTCCATaGACACACTCTTCTCTGAGA +
Preference number: 5 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNKVPPP*THSSLR
Trigger: TCTCAGAGAAGAGTGTGTCAATGGAGGTGGAACCTT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGCAGAAATCTTATTCTaGATCTTCCTCCGAATTTTC +
Preference number: 5 (lower is better)
Translates to: SQGVGLIPLSTGSNNNADAEILF*IFLRIF
Trigger: GAAAATTCGGAGGAAGATCAAGAATAAGATTTCTGC...ATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTGGCATTATGGCATTTTaGTGGCCAGAGTCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTGIMAF*WPESGV
Trigger: GACCCCAGACTCTGGCCACAAAAATGCCATAATGCC...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATGCAGATGACGTAAATCTTATCTTTTaGCCTTCTTTGGGCCCTATA +
Preference number: 5 (lower is better)
Translates to: QGVGLIPLSTGSNNNADDVNLIF*PSLGPI
Trigger: TATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTAC...GTCATCTGCATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCTTAAGTGCTGACCCTTaGACCACAAAGGCATGGAAC +
Preference number: 5 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGLSADP*TTKAWN
Trigger: GTTCCATGCCTTTGTGGTCAAAGGGTCAGCACTTAA...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCTCCACCTCATCGTCATaGAAGCTGTCACTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: RIYKTERLKIYLAQHATPSTSSS*KLSLVV
Trigger: TACCACCAGTGACAGCTTCAATGACGATGAGGTGGA...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCATGCTCCAAGTTCTCAGTaGAACAAGACTCCACTTTTT +
Preference number: 5 (lower is better)
Translates to: KHSSSLKTSQKATDSFPHAPSSQ*NKTPLF
Trigger: AAAAAGTGGAGTCTTGTTCAACTGAGAACTTGGAGC...ATGAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp AATGGAAGCCAGGGTGTGGGCTTAATCCCTCTAAGTACAGGCTCCAATAACAATTTAGGCAATATCTTTTaGGCACTATTGGTGGAAACA +
Preference number: 5 (lower is better)
Translates to: NGSQGVGLIPLSTGSNNNLGNIF*ALLVET
Trigger: TGTTTCCACCAATAGTGCCAAAAAGATATTGCCTAA...ATTGTTATTGGAGCCTGTACTTAGAGGGATTAAGCCCACACCCTGGCTTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGGGAAAGCCAGCAAGGTaGTCTGAAATGTCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLGKPAR*SEMSVV
Trigger: GACAACAGACATTTCAGACAACCTTGCTGGCTTTCC...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTCAGCAGGTACATGGGTaGGCTCATTCTCTCACTTCT +
Preference number: 5 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTQQVHG*AHSLTS
Trigger: AGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTG...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTCAGCAGGTACATGGGTaGGCTCATTCTCTCACTTCT +
Preference number: 5 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPQQVHG*AHSLTS
Trigger: AGAAGTGAGAGAATGAGCCAACCCATGTACCTGCTG...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CCTCACACTTCACAGAAATTCTTTCTTAAAACTGGCACTGCAGCCTTTCATTTAAAAAGAGCAGTGATGTaGGTTCTTGGAGCCCCCTTA +
Preference number: 5 (lower is better)
Translates to: PHTSQKFFLKTGTAAFHLKRAVM*VLGAPL
Trigger: TAAGGGGGCTCCAAGAACCAACATCACTGCTCTTTT...TAAATGAAAGGCTGCAGTGCCAGTTTTAAGAAAGAATTTCTGTGAAGTGTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAATGCTACTTGAGTAAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGAGGGCCTGCTCAGCATaGTTTAAAAAGGGTCACTCA +
Preference number: 5 (lower is better)
Translates to: KCYLSKSYLFAFFGPYRLRACSA*FKKGHS
Trigger: TGAGTGACCCTTTTTAAACAATGCTGAGCAGGCCCT...CAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTACTCAAGTAGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AGAAACACAGCAGTTCTCTTAAAACGTCACAGAAAGCGACAGACTCTTTCCCTCGCAGAAATCTTATTCTaGATCTTCCTCCGAATTTTC +
Preference number: 5 (lower is better)
Translates to: RNTAVLLKRHRKRQTLSLAEILF*IFLRIF
Trigger: GAAAATTCGGAGGAAGATCAAGAATAAGATTTCTGC...GAGGGAAAGAGTCTGTCGCTTTCTGTGACGTTTTAAGAGAACTGCTGTGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS-3UTR CAA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTGGAAAGCCAGCAAGGTaGTCTGAAATGTCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTGKPAR*SEMSVV
Trigger: GACAACAGACATTTCAGACAACCTTGCTGGCTTTCC...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAGAGCAACCTAGTTCAGCTGTCGGATTTTTATATAACACTCTCTTTATGTGAGATCTTTTTGCCTTCTTaGGGCCCTATAGGCTGCCTA +
Preference number: 5 (lower is better)
Translates to: KSNLVQLSDFYITLSLCEIFLPS*GPIGCL
Trigger: TAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGAT...CTCACATAAAGAGAGTGTTATATAAAAATCCGACAGCTGAACTAGGTTGCTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp TTCCTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGGTCACTCACAGTTTaGTCAAAGAGTGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: FLCPEKCSAMRIYNTFNPGSLTV*SKSAGV
Trigger: AACACCAGCACTCTTTGACAAAACTGTGAGTGACCC...AGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS GCA 90 bp ACCTCTTTCAACAGTAATTCATATGCACAGTTTGTTGCACTGACTTaGAGCAATGATGAGCAGCATTTTACAGGAATGAGCTGTTCACAA +
Preference number: 5 (lower is better)
Translates to: TSFNSNSYAQFVALT*SNDEQHFTGMSCSQ
Trigger: TTGTGAACAGCTCATTCCTGTAAAATGCTGCTCATCATTGCTGCAAGTCAGTGCAACAAACTGTGCATATGAATTACTGTTGAAAGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468127.1
CDS-3UTR CAA 90 bp CTTTGCCCTGAGAAATGTTCCGCTATGAGGATTTATAATACCTTTAATCCTGGCAAAGGAAACAAAACATaGTCTGGAAAGACACGGGAT +
Preference number: 5 (lower is better)
Translates to: LCPEKCSAMRIYNTFNPGKGNKT*SGKTRD
Trigger: ATCCCGTGTCTTTCCAGACAATGTTTTGTTTCCTTT...GCCAGGATTAAAGGTATTATAAATCCTCATAGCGGAACATTTCTCAGGGCAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATAAAGGAAACAAAACATaGTCTGGAAAGACACGGGAT +
Preference number: 5 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNKGNKT*SGKTRD
Trigger: ATCCCGTGTCTTTCCAGACAATGTTTTGTTTCCTTT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp ACTGATATTCTGGTCTTAATCCCTGAACAGAAAATGTGCACACATCCATTAACTCTTCTGCCCCTAAATTaGAAACCTTTCCTTCCTCAT +
Preference number: 5 (lower is better)
Translates to: TDILVLIPEQKMCTHPLTLLPLN*KPFLPH
Trigger: ATGAGGAAGGAAAGGTTTCAAATTTAGGGGCAGAAG...AGTTAATGGATGTGTGCACATTTTCTGTTCAGGGATTAAGACCAGAATATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp AAATCTTATCTTTTTGCCTTCTTTGGGCCCTATAGGCTGCCTATGCCTGATAATACTGTCTGCCACTATTaGAAATCTTTAGAGCTAATC +
Preference number: 5 (lower is better)
Translates to: KSYLFAFFGPYRLPMPDNTVCHY*KSLELI
Trigger: GATTAGCTCTAAAGATTTCAAATAGTGGCAGACAGT...ATTATCAGGCATAGGCAGCCTATAGGGCCCAAAGAAGGCAAAAAGATAAGATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS-3UTR CAA 90 bp CGTATCTATAAAACTGAAAGACTTAAAATTTACTTAGCACAGCACGCAACACCCGTAAATCTTATCTTTTaGCCTTCTTTGGGCCCTATA +
Preference number: 5 (lower is better)
Translates to: RIYKTERLKIYLAQHATPVNLIF*PSLGPI
Trigger: TATAGGGCCCAAAGAAGGCAAAAAGATAAGATTTAC...GGGTGTTGCGTGCTGTGCTAAGTAAATTTTAAGTCTTTCAGTTTTATAGATACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330387.11
ENST00000616381.4
CDS CCA 72 bp CGCTCTCCAGCACCTCCATGGCGGTGCGGGCCGCGCTaGGCCGAGGATGCTAAGCGCAGGAGGGGACGCGCA +
Preference number: 6 (lower is better)
Translates to: RSPAPPWRCGPR*AEDAKRRRGRA
Trigger: TGCGCGTCCCCTCCTGCGCTTAGCATCCTCGGCCCAGCGCGGCCCGCACCGCCATGGAGGTGCTGGAGAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
ENST00000616381.4
ENST00000620715.4
CDS GCA 72 bp AGCTCGCTCAGCTTGCGGTCCCACTGCAGCACGCCCTaGTCCCCGCTCTCCAGCACCTCCATGGCGGTGCGG +
Preference number: 6 (lower is better)
Translates to: SSLSLRSHCSTP*SPLSSTSMAVR
Trigger: CCGCACCGCCATGGAGGTGCTGGAGAGCGGGGAGCAGGGCGTGCTGCAGTGGGACCGCAAGCTGAGCGAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
ENST00000616381.4
ENST00000620715.4
CDS TCA 72 bp CGTGTGGTACATGAGGGCCTCGCCGTCCCCGGGCTCTaGCAGCTCGCTCAGCTTGCGGTCCCACTGCAGCAC +
Preference number: 6 (lower is better)
Translates to: RVVHEGLAVPGL*QLAQLAVPLQH
Trigger: GTGCTGCAGTGGGACCGCAAGCTGAGCGAGCTGTCAGAGCCCGGGGACGGCGAGGCCCTCATGTACCACACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
ENST00000616381.4
ENST00000620715.4
CDS GCA 72 bp CCGAGGATGCTAAGCGCAGGAGGGGACGCGCAGAGCTaGCTCGGACCGGCAAGGTTCCTCTCTCTCCGCGTG +
Preference number: 6 (lower is better)
Translates to: PRMLSAGGDAQS*LGPARFLSLRV
Trigger: CACGCGGAGAGAGAGGAACCTTGCCGGTCCGAGGCAGCTCTGCGCGTCCCCTCCTGCGCTTAGCATCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
ENST00000616381.4
ENST00000620715.4
CDS CCA 72 bp GGAAAGCAAACGTCTGCTCCTCTGCCGGAGAGAGGATaGCCAAGCGCTCCCGTCCGGTGTCCTCGGAGATCC +
Preference number: 6 (lower is better)
Translates to: GKQTSAPLPERG*PSAPVRCPRRS
Trigger: GGATCTCCGAGGACACCGGACGGGAGCGCTTGGCCATCCTCTCTCCGGCAGAGGAGCAGACGTTTGCTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000468127.1
CDS CCA 72 bp ACCTCATCGTCATTGAAGCTGTCACTGGTGGTAATGTaGGTGAAGGGCGACTGGGCCCGAGGCTCCTCGCAC +
Preference number: 6 (lower is better)
Translates to: TSSSLKLSLVVM*VKGDWARGSSH
Trigger: GTGCGAGGAGCCTCGGGCCCAGTCGCCCTTCACCCACATTACCACCAGTGACAGCTTCAATGACGATGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000452463.5
ENST00000456390.5
ENST00000458726.5
ENST00000616381.4
ENST00000620715.4
CDS CCA 72 bp AACATATCGTCATTGAAGCTGTCACTGGTGGTAATGTaGGTGAAGGGCGACTGGGCCCGAGGCTCCTCGCAC +
Preference number: 6 (lower is better)
Translates to: NISSLKLSLVVM*VKGDWARGSSH
Trigger: GTGCGAGGAGCCTCGGGCCCAGTCGCCCTTCACCCACATTACCACCAGTGACAGCTTCAATGACGATATGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420629.1
CDS CCA 72 bp GGCTGTGATGGTCAGAGTGACAGACGGAACGAGTCCTaGGGGTGGTTCGTCTGTAACTGGCTCTGTCTTGAT +
Preference number: 6 (lower is better)
Translates to: GCDGQSDRRNES*GWFVCNWLCLD
Trigger: ATCAAGACAGAGCCAGTTACAGACGAACCACCCCCAGGACTCGTTCCGTCTGTCACTCTGACCATCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000420629.1
ENST00000452463.5
ENST00000456390.5
ENST00000458726.5
ENST00000620715.4
CDS CCA 72 bp AGCAAATTAGCTCCAGCTGGGTGTCCTTGGCAGTGGTaGGCTCCAAGACTCAGCAGACAGGTCAACATCCCA +
Preference number: 6 (lower is better)
Translates to: SKLAPAGCPWQW*APRLSRQVNIP
Trigger: TGGGATGTTGACCTGTCTGCTGAGTCTTGGAGCCCACCACTGCCAAGGACACCCAGCTGGAGCTAATTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458726.5
CDS GCA 72 bp AGGGAAATAAAACAAGACCCTGCCCAACTTGCCACATaGTGTCTTACCCACGGAGGCTGTGTAGGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: REIKQDPAQLAT*CLTHGGCVGLL
Trigger: CAGGAGCCCTACACAGCCTCCGTGGGTAAGACAGCATGTGGCAAGTTGGGCAGGGTCTTGTTTTATTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456390.5
CDS CCA 72 bp GATGGTCAGAGTGACAGACGGAACGAGTCCTGGGGGTaGTTCGTCTGTAACTGGCTCTGTCTTGATGGATGT +
Preference number: 6 (lower is better)
Translates to: DGQSDRRNESWG*FVCNWLCLDGC
Trigger: ACATCCATCAAGACAGAGCCAGTTACAGACGAACCACCCCCAGGACTCGTTCCGTCTGTCACTCTGACCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000420629.1
ENST00000452463.5
ENST00000456390.5
ENST00000458726.5
ENST00000620715.4
CDS CAA 90 bp GACGGAACGAGTCCTGGGGGTGGTTCGTCTGTAACTGGCTCTGTCTaGATGGATGTTGAAGGGAAGTCTGTAGACAGGTACCATTTCTCA +
Preference number: 6 (lower is better)
Translates to: DGTSPGGGSSVTGSV*MDVEGKSVDRYHFS
Trigger: TGAGAAATGGTACCTGTCTACAGACTTCCCTTCAACATCCATCAAGACAGAGCCAGTTACAGACGAACCACCCCCAGGACTCGTTCCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000420629.1
ENST00000452463.5
ENST00000456390.5
ENST00000458726.5
ENST00000620715.4
CDS CAA 72 bp AGTCCTGGGGGTGGTTCGTCTGTAACTGGCTCTGTCTaGATGGATGTTGAAGGGAAGTCTGTAGACAGGTAC +
Preference number: 6 (lower is better)
Translates to: SPGGGSSVTGSV*MDVEGKSVDRY
Trigger: GTACCTGTCTACAGACTTCCCTTCAACATCCATCAAGACAGAGCCAGTTACAGACGAACCACCCCCAGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000420629.1
ENST00000452463.5
ENST00000456390.5
ENST00000458726.5
ENST00000620715.4
CDS TCA 72 bp TGGTTCGTCTGTAACTGGCTCTGTCTTGATGGATGTTaGAGGGAAGTCTGTAGACAGGTACCATTTCTCACT +
Preference number: 6 (lower is better)
Translates to: WFVCNWLCLDGC*REVCRQVPFLT
Trigger: AGTGAGAAATGGTACCTGTCTACAGACTTCCCTTCAACATCCATCAAGACAGAGCCAGTTACAGACGAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330387.11
ENST00000420629.1
ENST00000452463.5
ENST00000456390.5
ENST00000458726.5
ENST00000620715.4
CDS TCA 72 bp TGTAGACAGGTACCATTTCTCACTTTCCACCTCATATaGGAAAAACACATACGCAGTTGGTCCTTGAACAAC +
Preference number: 6 (lower is better)
Translates to: CRQVPFLTFHLI*EKHIRSWSLNN
Trigger: GTTGTTCAAGGACCAACTGCGTATGTGTTTTTCTCATATGAGGTGGAAAGTGAGAAATGGTACCTGTCTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420629.1
CDS GCA 72 bp AACAGTAATTCATATGCACAGTTTGTTGCACTGACTTaGAGCAATGATGAGCAGCATTTTACAGGAATGAGC +
Preference number: 6 (lower is better)
Translates to: NSNSYAQFVALT*SNDEQHFTGMS
Trigger: GCTCATTCCTGTAAAATGCTGCTCATCATTGCTGCAAGTCAGTGCAACAAACTGTGCATATGAATTACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468127.1
CDS TCA 72 bp CTTTCAACAGTAATTCATATGCACAGTTTGTTGCACTaGCTTGCAGCAATGATGAGCAGCATTTTACAGGAA +
Preference number: 6 (lower is better)
Translates to: LSTVIHMHSLLH*LAAMMSSILQE
Trigger: TTCCTGTAAAATGCTGCTCATCATTGCTGCAAGTCAGTGCAACAAACTGTGCATATGAATTACTGTTGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468127.1