RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CREB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000118260

Ensembl transcript IDs: ENST00000353267.8, ENST00000414681.1, ENST00000418081.5, ENST00000421139.5, ENST00000430624.5, ENST00000432329.6, ENST00000445803.5, ENST00000448277.5, ENST00000451164.1, ENST00000452474.5, ENST00000455757.1, ENST00000457101.5, ENST00000464407.1, ENST00000480189.5, ENST00000494094.5, ENST00000494983.1

Found 522 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTGCTaGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGG +
Preference number: 1 (lower is better)
Translates to: LSLSCCFFSRLCRKC*GGCHNNSRGNSASG
Trigger: CCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR GCA 90 bp GACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTaGTGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGT +
Preference number: 1 (lower is better)
Translates to: DLSLSCCFFSRLCRK*WGGCHNNSRGNSAS
Trigger: ACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR GCA 90 bp TGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGCTTA +
Preference number: 1 (lower is better)
Translates to: WGGCHNNSRGNSASG*CANLVCLYVSRGSL
Trigger: TAAGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR CCA 90 bp CTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTaGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAAC +
Preference number: 1 (lower is better)
Translates to: LTLCMRPTHYFSSRG*GNSVPKAIKELSTN
Trigger: GTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR CCA 90 bp TCTTTGGATGTGACTTCTCAAGGATGGTCTTGTCACTTCAGTGCCTaGTCAAATGACAAGATGGGCAATCTTTTCCTGAAGGTCCAAGCA +
Preference number: 1 (lower is better)
Translates to: SLDVTSQGWSCHFSA*SNDKMGNLFLKVQA
Trigger: TGCTTGGACCTTCAGGAAAAGATTGCCCATCTTGTCATTTGACCAGGCACTGAAGTGACAAGACCATCCTTGAGAAGTCACATCCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR GCA 90 bp TTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATaGGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTG +
Preference number: 1 (lower is better)
Translates to: FGNQHFFIAPYLLYA*GPHITSAQEAGVIL
Trigger: CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR GCA 90 bp TCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATaGATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAAT +
Preference number: 1 (lower is better)
Translates to: SIWQSTLLHCTLLTL*MRPTHYFSSRGWGN
Trigger: ATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR TCA 90 bp AACATGACCCAGCAACTCCACTCCCAGGCATATACCCCAAATAATTaGAAACACGGACTCAAATACTTGTACACGAACATTCATAACAGC +
Preference number: 1 (lower is better)
Translates to: NMTQQLHSQAYTPNN*KHGLKYLYTNIHNS
Trigger: GCTGTTATGAATGTTCGTGTACAAGTATTTGAGTCCGTGTTTTCAATTATTTGGGGTATATGCCTGGGAGTGGAGTTGCTGGGTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR TCA 90 bp AAAGGTAGAAATGATAGTAGGGATTTGTCCTACAGGGATTTATCCTaGGAGACAGAGATAAACTTCAGCCAGATGACATCTGATGGGATA +
Preference number: 1 (lower is better)
Translates to: KGRNDSRDLSYRDLS*ETEINFSQMTSDGI
Trigger: TATCCCATCAGATGTCATCTGGCTGAAGTTTATCTCTGTCTCTCAGGATAAATCCCTGTAGGACAAATCCCTACTATCATTTCTACCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR TCA 90 bp TCCAATACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTaGAGAAACATACAAATAATGCAGCTGCTTATTTTCAGATGTCTC +
Preference number: 1 (lower is better)
Translates to: SNTMAGIAGLNTSWQ*RNIQIMQLLIFRCL
Trigger: GAGACATCTGAAAATAAGCAGCTGCATTATTTGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR TCA 90 bp CGAAACACTAAAACTAGAAATGGATCAGAATTTTATCTTTGGATGTaGCTTCTCAAGGATGGTCTTGTCACTTCAGTGCCTGGTCAAATG +
Preference number: 1 (lower is better)
Translates to: RNTKTRNGSEFYLWM*LLKDGLVTSVPGQM
Trigger: CATTTGACCAGGCACTGAAGTGACAAGACCATCCTTGAGAAGTCACATCCAAAGATAAAATTCTGATCCATTTCTAGTTTTAGTGTTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR TCA 90 bp TATGTAAGCCTCCCAACAAAAAGTTCTAGTTGTGCTTTGTACAACTaGGTGAACTATTTATCTCACAACTCTTCACCTACAGCCTTACTA +
Preference number: 1 (lower is better)
Translates to: YVSLPTKSSSCALYN*VNYLSHNSSPTALL
Trigger: TAGTAAGGCTGTAGGTGAAGAGTTGTGAGATAAATAGTTCACTCAGTTGTACAAAGCACAACTAGAACTTTTTGTTGGGAGGCTTACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR GCA 90 bp AAGTGCCACATGGCCCTATATTTGCAAAGTGAGCAATATCAAACTTaGTATTTTCTAGGCAAATCAGTAGCATATGTACAAATTCCTATG +
Preference number: 1 (lower is better)
Translates to: KCHMALYLQSEQYQT*YFLGKSVAYVQIPM
Trigger: CATAGGAATTTGTACATATGCTACTGATTTGCCTAGAAAATAGCAAGTTTGATATTGCTCACTTTGCAAATATAGGGCCATGTGGCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR TCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTAGTCGGTCTGCCCCCTaGGGACACATACAAAGGCTT +
Preference number: 2 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSSRSAP*GHIQRL
Trigger: AAGCCTTTGTATGTGTCCTCAGGGGGCAGACCGACT...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CCA 90 bp CGGACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTGCTGGGGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCA +
Preference number: 2 (lower is better)
Translates to: RTSLFRAASSAGCVGSAGGAVRI*YVCTSP
Trigger: TGGAGACGTACAAACATACCAGATTCGCACAGCACC...CCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR-3UTR TCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGCGTTGAAAATTTCTTaGGGGGAGAAGTGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTALKIS*GEKWRQ
Trigger: CTGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAGGAGGGTGGGGGTTaGAAAGCAGAAGTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLEEGGG*KAEVSS
Trigger: TGAAGAGACTTCTGCTTTTCAACCCCCACCCTCCTC...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCACTGGTCTTGAACTCTTaGCCACAGGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNALVLNS*PQVIHP
Trigger: TGGGTGGATCACCTGTGGTCAAGAGTTCAAGACCAG...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR TCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTGCAGAAGTCTCTTCATaGTTCCTGGCGTTGAAAATT +
Preference number: 2 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSAEVSS*FLALKI
Trigger: AATTTTCAACGCCAGGAATCATGAAGAGACTTCTGC...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR TCA 90 bp ACGAGATGGAAAAACCAGCGGAAGGAAGATTTGGGGGAGAAGTTAAGTTTGTCTGCTGCCTCAACCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 2 (lower is better)
Translates to: TRWKNQRKEDLGEKLSLSAASTS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGTTGAGGCAGC...AGACAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTGGTTTTTCCATCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR-3UTR GCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCACTCTTAAAGTCGGTCTaGCCCCTGAGGACACATACA +
Preference number: 2 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNALLKSV*PLRTHT
Trigger: TGTATGTGTCCTCAGGGGGCAGACCGACTTTAAGAG...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CCA 90 bp AGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGCAGTCTAAAAGGTAAGTaGGGCACAGCTTGGATGATC +
Preference number: 2 (lower is better)
Translates to: SASGCCANLVCLYVSRGSSLKGK*GTAWMI
Trigger: GATCATCCAAGCTGTGCCCCACTTACCTTTTAGACT...GCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR-3UTR CCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATTCAGCTCAAGAGGCTaGGGTAATTCTGTCCCTAAG +
Preference number: 2 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAFSSRG*GNSVPK
Trigger: CTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGAA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CCA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAACAGGCTGGAGTGCAATaGTGCTATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQQAGVQ*CYLGSL
Trigger: CAGTGAGCCGAGATAGCACCATTGCACTCCAGCCTG...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CCA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAATGGAGTCGCCCAGGCTaGAGTGCAATGGTGCTATCT +
Preference number: 2 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKWSRPG*SAMVLS
Trigger: AGATAGCACCATTGCACTCCAGCCTGGGCGACTCCA...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR TCA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCAGCGTTGAAAATTTCTTaGGGGGAGAAGTGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSALKIS*GEKWRQ
Trigger: CTGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGC...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp ACGAGATGGAAAAACCAGCGGAAGGAAGATTTGGGGGAGAAGTTAAGTTTGTCTGAGGAGGGTGGGGGTTaGAAAGCAGAAGTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: TRWKNQRKEDLGEKLSLSEEGGG*KAEVSS
Trigger: TGAAGAGACTTCTGCTTTTCAACCCCCACCCTCCTC...AGACAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTGGTTTTTCCATCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR-3UTR TCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTTTCACAATGAGAATGTaGCAACATGTCAATTTGGCA +
Preference number: 2 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSFTMRM*QHVNLA
Trigger: TGCCAAATTGACATGTTGTCACATTCTCATTGTGAA...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR TCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTTGTGCTTTGTACAACTaGGTGAACTATTTATCTCAC +
Preference number: 2 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSCALYN*VNYLSH
Trigger: GTGAGATAAATAGTTCACTCAGTTGTACAAAGCACA...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR GCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAATGAAATTCTGTAGTTaGTTTCAGGCAGTTTTGCGC +
Preference number: 2 (lower is better)
Translates to: ACGPHITSAQEAGVILSLMKFCS*FQAVLR
Trigger: GCGCAAAACTGCCTGAAAGCAACTACAGAATTTCAT...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAAGCGTTGAAAATTTCTTaGGGGGAGAAGTGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQALKIS*GEKWRQ
Trigger: CTGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGC...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCACTTAATCCTGCAAAATaGAGCAGCCGTGATCTTCAA +
Preference number: 2 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNALNPAK*SSRDLQ
Trigger: TTGAAGATCACGGCTGCTTCATTTTGCAGGATTAAG...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR TCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTGCAGAAGTCTCTTCATaGTTCCTGGCGTTGAAAATT +
Preference number: 2 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGAEVSS*FLALKI
Trigger: AATTTTCAACGCCAGGAATCATGAAGAGACTTCTGC...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAGAGGAGGGTGGGGGTTaGAAAGCAGAAGTCTCTTCA +
Preference number: 2 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLEEGGG*KAEVSS
Trigger: TGAAGAGACTTCTGCTTTTCAACCCCCACCCTCCTC...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp TGTAGGAAGTGCTGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGACTCATCTTCAAACTaGCGTTCAGAATTCAAATTC +
Preference number: 2 (lower is better)
Translates to: CRKCWGGCHNNSRGNSASDSSSN*RSEFKF
Trigger: GAATTTGAATTCTGAACGTCAGTTTGAAGATGAGTC...ACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR-3UTR GCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATACCACTGTTATAGCTaGCACAGACAAAGCATACAA +
Preference number: 2 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAYHCYS*HRQSIQ
Trigger: TTGTATGCTTTGTCTGTGGCAGCTATAACAGTGGTA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CCA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAAAGGCTTTCTTGGTGGTaGTATGTAAGTGCAATGGGC +
Preference number: 2 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQRLSWW*YVSAMG
Trigger: GCCCATTGCACTTACATACCACCACCAAGAAAGCCT...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CCA 90 bp GTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGCTTAAGTCTAAAAAGTGGGGCACAGCTTaGATGATCTTCCTAGATAGA +
Preference number: 2 (lower is better)
Translates to: VLCESGMFVRLQRQLKSKKWGTA*MIFLDR
Trigger: TCTATCTAGGAAGATCATCCAAGCTGTGCCCCACTT...TTTAGACTTAAGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR CAA 90 bp TCCTTTCCATTTGATGTCAGGCCCGTGTTAGAATTCTCATCCGGTTaGGTCACTGCACTTAAGAAAGATGTGGAGAAATTAGGACGCACA +
Preference number: 2 (lower is better)
Translates to: SFPFDVRPVLEFSSG*VTALKKDVEKLGRT
Trigger: TGTGCGTCCTAATTTCTCCACATCTTTCTTAAGTGCAGTGACCAAACCGGATGAGAATTCTAACACGGGCCTGACATCAAATGGAAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR-3UTR TCA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAACATGATTCCTGGCGTTaGAAATTTCTTGAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQHDSWR*KFLEGR
Trigger: TCTCCCCTCAAGAAATTTTCAACGCCAGGAATCATG...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR GCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATCACATGAATGTGATTaGCTTGATTTATCAGGGACT +
Preference number: 2 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNASHECD*LDLSGT
Trigger: AGTCCCTGATAAATCAAGGCAATCACATTCATGTGA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR GCA 90 bp CCCAGAATATATAAGGAACTCAGAACCCAACAACAAAATTTCAATGAACAAAGGTACCCAGCTGGGACCTaGACCCACCGTACCAGAATG +
Preference number: 2 (lower is better)
Translates to: PRIYKELRTQQQNFNEQRYPAGT*THRTRM
Trigger: CATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTA...CCTTTGTTCATTGAAATTTTGTTGTTGGGTTCTGAGTTCCTTATATATTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR-3UTR CCA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAATTGTCTTTCAGGTTGTaGCCAAGCCAGTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKLSFRL*PSQSIF
Trigger: GAAAATGGACTGGCTTGGCCACAACCTGAAAGACAA...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR TCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGCAGAAGTCTCTTCATaGTTCCTGGCGTTGAAAATT +
Preference number: 2 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSAEVSS*FLALKI
Trigger: AATTTTCAACGCCAGGAATCATGAAGAGACTTCTGC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCAATACTCAGCATTCCTaGCTTAAGAGCTCTCAGAGC +
Preference number: 2 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVANTQHS*LKSSQS
Trigger: GCTCTGAGAGCTCTTAAGTCAGGAATGCTGAGTATT...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGAGTGGAGGCAGGTGTTaGAACATTCACAGTTTAATG +
Preference number: 2 (lower is better)
Translates to: IAPYLLYACGPHITSAQESGGRC*NIHSLM
Trigger: CATTAAACTGTGAATGTTCCAACACCTGCCTCCACT...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR GCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGATGAAATTCTGTAGTTaGTTTCAGGCAGTTTTGCGC +
Preference number: 2 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKMKFCS*FQAVLR
Trigger: GCGCAAAACTGCCTGAAAGCAACTACAGAATTTCAT...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAATTCACAATGAGAATGTaGCAACATGTCAATTTGGCA +
Preference number: 2 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKFTMRM*QHVNLA
Trigger: TGCCAAATTGACATGTTGTCACATTCTCATTGTGAA...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR GCA 90 bp TACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTGAAGAAACATACATACTTACTTTATGCATaGGGCCCACACATTACTTCA +
Preference number: 2 (lower is better)
Translates to: YNGRYSRLEHILAVKKHTYLLYA*GPHITS
Trigger: TGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTA...TGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR-3UTR CCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGTTGTCTTTCAGGTTGTaGCCAAGCCAGTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: VNLAINTSSLHLTYFMHALSFRL*PSQSIF
Trigger: GAAAATGGACTGGCTTGGCCACAACCTGAAAGACAA...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAAGTGGAGGCAGGTGTTaGAACATTCACAGTTTAATG +
Preference number: 2 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLSGGRC*NIHSLM
Trigger: CATTAAACTGTGAATGTTCCAACACCTGCCTCCACT...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR CAA 90 bp CTCAGATTTACTCTCACTTCTCTGAGATGCTCCTCAGACAAAAGCTaGGAAATGCCATACTTCTATAGGCAAGTAATGTTAGGTCAAATG +
Preference number: 2 (lower is better)
Translates to: LRFTLTSLRCSSDKS*EMPYFYRQVMLGQM
Trigger: CATTTGACCTAACATTACTTGCCTATAGAAGTATGGCATTTCCAAGCTTTTGTCTGAGGAGCATCTCAGAGAAGTGAGAGTAAATCTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CAA 90 bp TTTATGACATCAGACACAGCTGGTCGTATGTCTCCATTAGTCATCTaGACAGTAACATCTCCAAATCCACAAATAGGCACTGTTCAATCT +
Preference number: 2 (lower is better)
Translates to: FMTSDTAGRMSPLVI*TVTSPNPQIGTVQS
Trigger: AGATTGAACAGTGCCTATTTGTGGATTTGGAGATGTTACTGTCAAGATGACTAATGGAGACATACGACCAGCTGTGTCTGATGTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR-3UTR TCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTCATGATTCCTGGCGTTaGAAATTTCTTGAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLHDSWR*KFLEGR
Trigger: TCTCCCCTCAAGAAATTTTCAACGCCAGGAATCATG...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR GCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAATGAAATTCTGTAGTTaGTTTCAGGCAGTTTTGCGC +
Preference number: 2 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLMKFCS*FQAVLR
Trigger: GCGCAAAACTGCCTGAAAGCAACTACAGAATTTCAT...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTTTGTCTTTCAGGTTGTaGCCAAGCCAGTCCATTTTC +
Preference number: 2 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLLSFRL*PSQSIF
Trigger: GAAAATGGACTGGCTTGGCCACAACCTGAAAGACAA...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR TCA 90 bp CCCAGAATATATAAGGAACTCAGAACCCAACAACAAAATTTCAATGAACAAAGGGAACACATACAGAACTaGATTAAGAAGCAACAACTG +
Preference number: 2 (lower is better)
Translates to: PRIYKELRTQQQNFNEQREHIQN*IKKQQL
Trigger: CAGTTGTTGCTTCTTAATTCAGTTCTGTATGTGTTC...CCTTTGTTCATTGAAATTTTGTTGTTGGGTTCTGAGTTCCTTATATATTCTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR GCA 72 bp CTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTaGTGGGGAGGATGCCATAACAACTCCAGGGGCAAT +
Preference number: 3 (lower is better)
Translates to: LSCCFFSRLCRK*WGGCHNNSRGN
Trigger: ATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR CCA 72 bp TGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTaGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTC +
Preference number: 3 (lower is better)
Translates to: CMRPTHYFSSRG*GNSVPKAIKEL
Trigger: GAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR CCA 72 bp GTGGTTGCCAGGGACAAGGGCGGTGGGAGGAGAAAATaGAGAGTAACGGGACTTTACTTTTGGAGTGATGAG +
Preference number: 3 (lower is better)
Translates to: VVARDKGGGRRK*RVTGLYFWSDE
Trigger: CTCATCACTCCAAAAGTAAAGTCCCGTTACTCTCCATTTTCTCCTCCCACCGCCCTTGTCCCTGGCAACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CCA 72 bp AGGAAGCAGATTGGTGGTTGCCAGGGACAAGGGCGGTaGGAGGAGAAAATGGAGAGTAACGGGACTTTACTT +
Preference number: 3 (lower is better)
Translates to: RKQIGGCQGQGR*EEKMESNGTLL
Trigger: AAGTAAAGTCCCGTTACTCTCCATTTTCTCCTCCCACCGCCCTTGTCCCTGGCAACCACCAATCTGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CCA 72 bp TACCCGGATGTAAATCCAAAGAAACAGGAAGCAGATTaGTGGTTGCCAGGGACAAGGGCGGTGGGAGGAGAA +
Preference number: 3 (lower is better)
Translates to: YPDVNPKKQEAD*WLPGTRAVGGE
Trigger: TTCTCCTCCCACCGCCCTTGTCCCTGGCAACCACCAATCTGCTTCCTGTTTCTTTGGATTTACATCCGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR-3UTR CAA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAGGCGTTGAAAATTTCTaGAGGGGAGAAGTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: ACGPHITSAQEAGVILSLGVENF*RGEVEA
Trigger: TGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGCC...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR TCA 72 bp CAAGATGGGCAATCTTTTCCTGAAGGTCCAAGCACCTaGACGTGGCAGGGTGACCCGATTCCGATTTGCTTA +
Preference number: 3 (lower is better)
Translates to: QDGQSFPEGPST*TWQGDPIPICL
Trigger: TAAGCAAATCGGAATCGGGTCACCCTGCCACGTTCAGGTGCTTGGACCTTCAGGAAAAGATTGCCCATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CCA 72 bp CCGGATGTAAATCCAAAGAAACAGGAAGCAGATTGGTaGTTGCCAGGGACAAGGGCGGTGGGAGGAGAAAAT +
Preference number: 3 (lower is better)
Translates to: PDVNPKKQEADW*LPGTRAVGGEN
Trigger: ATTTTCTCCTCCCACCGCCCTTGTCCCTGGCAACCACCAATCTGCTTCCTGTTTCTTTGGATTTACATCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR GCA 72 bp TGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGTTTGTACGTCTCCAGA +
Preference number: 3 (lower is better)
Translates to: CHNNSRGNSASG*CANLVCLYVSR
Trigger: TCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR-3UTR CAA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAATTTTGTCTTTCAGGTaGTGGCCAAGCCAGTCCATT +
Preference number: 3 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTILSFR*WPSQSI
Trigger: AATGGACTGGCTTGGCCACAACCTGAAAGACAAAAT...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAACAAATTATTACTTCTaGAGGAGGGTGGGGGTTGAA +
Preference number: 3 (lower is better)
Translates to: ACGPHITSAQEAGVILSLTNYYF*RRVGVE
Trigger: TTCAACCCCCACCCTCCTCAAGAAGTAATAATTTGT...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCAAAGTGGAGGCAGGTGTaGGAACATTCACAGTTTAAT +
Preference number: 3 (lower is better)
Translates to: SAQEAGVILSLRQSRSSAKWRQV*EHSQFN
Trigger: ATTAAACTGTGAATGTTCCAACACCTGCCTCCACTT...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTGTTTATAATATCAACTaGCATCACCGGCTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSVYNIN*HHRLCS
Trigger: AGAACAAAGCCGGTGATGCAAGTTGATATTATAAAC...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CAA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTATTTTGTCTTTCAGGTaGTGGCCAAGCCAGTCCATT +
Preference number: 3 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGILSFR*WPSQSI
Trigger: AATGGACTGGCTTGGCCACAACCTGAAAGACAAAAT...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAAGGCGTTGAAAATTTCTaGAGGGGAGAAGTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKGVENF*RGEVEA
Trigger: TGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGCC...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR TCA 72 bp TCAAGGATGGTCTTGTCACTTCAGTGCCTGGTCAAATaGCAAGATGGGCAATCTTTTCCTGAAGGTCCAAGC +
Preference number: 3 (lower is better)
Translates to: SRMVLSLQCLVK*QDGQSFPEGPS
Trigger: GCTTGGACCTTCAGGAAAAGATTGCCCATCTTGTCATTTGACCAGGCACTGAAGTGACAAGACCATCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR GCA 72 bp CAACACTTCTTCATTGCACCTTACTTACTTTATGCATaGGGCCCACACATTACTTCAGCTCAAGAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: QHFFIAPYLLYA*GPHITSAQEAG
Trigger: CCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCACAAATTATTACTTCTaGAGGAGGGTGGGGGTTGAA +
Preference number: 3 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGTNYYF*RRVGVE
Trigger: TTCAACCCCCACCCTCCTCAAGAAGTAATAATTTGT...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR TCA 72 bp GTTGAAAAGCAGAAGTCTCTTCATGATTCCTGGCGTTaGAAATTTCTTGAGGGGAGAAGTGGAGGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: VEKQKSLHDSWR*KFLEGRSGGRC
Trigger: ACACCTGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGCCAGGAATCATGAAGAGACTTCTGCTTTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR GCA 72 bp TGGCTAACTGGTTGGAGTGCAGACATAGGGAAGTTGTaGATTAAATCTCCTGTGGGGAAACTGCATGAAAGA +
Preference number: 3 (lower is better)
Translates to: WLTGWSADIGKL*IKSPVGKLHER
Trigger: TCTTTCATGCAGTTTCCCCACAGGAGATTTAATGCACAACTTCCCTATGTCTGCACTCCAACCAGTTAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
3UTR CCA 72 bp TACGTCTCCAGAGGCAGCTTAAGTCTAAAAGGTAAGTaGGGCACAGCTTGGATGATCTTCCTAGATAGAGTA +
Preference number: 3 (lower is better)
Translates to: YVSRGSLSLKGK*GTAWMIFLDRV
Trigger: TACTCTATCTAGGAAGATCATCCAAGCTGTGCCCCACTTACCTTTTAGACTTAAGCTGCCTCTGGAGACGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
3UTR-3UTR CAA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGATTTTGTCTTTCAGGTaGTGGCCAAGCCAGTCCATT +
Preference number: 3 (lower is better)
Translates to: IAPYLLYACGPHITSAQEILSFR*WPSQSI
Trigger: AATGGACTGGCTTGGCCACAACCTGAAAGACAAAAT...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCAAAGTGGAGGCAGGTGTaGGAACATTCACAGTTTAAT +
Preference number: 3 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSKWRQV*EHSQFN
Trigger: ATTAAACTGTGAATGTTCCAACACCTGCCTCCACTT...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAGGCGTTGAAAATTTCTaGAGGGGAGAAGTGGAGGCA +
Preference number: 3 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLGVENF*RGEVEA
Trigger: TGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGCC...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR TCA 72 bp CATTCCAACTCCTGGACATTATCCTTCCTTTCCATTTaGTGTCAGGCCCGTGTTAGAATTCTCATCCGGTTT +
Preference number: 3 (lower is better)
Translates to: HSNSWTLSFLSI*CQARVRILIRF
Trigger: AAACCGGATGAGAATTCTAACACGGGCCTGACATCAAATGGAAAGGAAGGATAATGTCCAGGAGTTGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR TCA 72 bp ACAGTTCCTCAAAAAGTTAAATGTGCGATTTCAACATaGCCCAGCAACTCCACTCCCAGGCATATACCCCAA +
Preference number: 3 (lower is better)
Translates to: TVPQKVKCAIST*PSNSTPRHIPQ
Trigger: TTGGGGTATATGCCTGGGAGTGGAGTTGCTGGGTCATGTTGAAATCGCACATTTAACTTTTTGAGGAACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR GCA 72 bp CAATCAACACTTCTTCATTGCACCTTACTTACTTTATaGATGCGGCCCACACATTACTTCAGCTCAAGAGGC +
Preference number: 3 (lower is better)
Translates to: QSTLLHCTLLTL*MRPTHYFSSRG
Trigger: GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGACAAATTATTACTTCTaGAGGAGGGTGGGGGTTGAA +
Preference number: 3 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKTNYYF*RRVGVE
Trigger: TTCAACCCCCACCCTCCTCAAGAAGTAATAATTTGT...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR GCA 72 bp GACAACATGTCAATTTGGCAATCAACACTTCTTCATTaGACCTTACTTACTTTATGCATGCGGCCCACACAT +
Preference number: 3 (lower is better)
Translates to: DNMSIWQSTLLH*TLLTLCMRPTH
Trigger: ATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
3UTR-3UTR CAA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCATGACAATCCAAATATaGCAGTACAGCAGTCATTCA +
Preference number: 3 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAMTIQI*QYSSHS
Trigger: TGAATGACTGCTGTACTGCAATATTTGGATTGTCAT...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR-3UTR CAA 90 bp CCCAGAATATATAAGGAACTCAGAACCCAACAACAAAATTTCAATGAACAAAGGCAGCGGAAGGAAGATTaGGGGGAGAAGTTAAGTTTG +
Preference number: 3 (lower is better)
Translates to: PRIYKELRTQQQNFNEQRQRKED*GEKLSL
Trigger: CAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTG...CCTTTGTTCATTGAAATTTTGTTGTTGGGTTCTGAGTTCCTTATATATTCTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR TCA 72 bp AATGATAGTAGGGATTTGTCCTACAGGGATTTATCCTaGGAGACAGAGATAAACTTCAGCCAGATGACATCT +
Preference number: 3 (lower is better)
Translates to: NDSRDLSYRDLS*ETEINFSQMTS
Trigger: AGATGTCATCTGGCTGAAGTTTATCTCTGTCTCTCAGGATAAATCCCTGTAGGACAAATCCCTACTATCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CCA 72 bp AAAATTTCAAACAGCCAAATGTCCCCAGAAGAGGACTaGTTAAACTGTATCTGTACAATGGCAGCAGTTTAT +
Preference number: 3 (lower is better)
Translates to: KISNSQMSPEED*LNCICTMAAVY
Trigger: ATAAACTGCTGCCATTGTACAGATACAGTTTAACCAGTCCTCTTCTGGGGACATTTGGCTGTTTGAAATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR TCA 72 bp CAACAAAAAGTTCTAGTTGTGCTTTGTACAACTGAGTaGACTATTTATCTCACAACTCTTCACCTACAGCCT +
Preference number: 3 (lower is better)
Translates to: QQKVLVVLCTTE*TIYLTTLHLQP
Trigger: AGGCTGTAGGTGAAGAGTTGTGAGATAAATAGTTCACTCAGTTGTACAAAGCACAACTAGAACTTTTTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CCA 72 bp TTGGAGCTAGATAGAAGTGGTGGTTGTACACCATTGTaGATGTACTACCACTTAATTGTTCACTTAAAAAGT +
Preference number: 3 (lower is better)
Translates to: LELDRSGGCTPL*MYYHLIVHLKS
Trigger: ACTTTTTAAGTGAACAATTAAGTGGTAGTACATCCACAATGGTGTACAACCACCACTTCTATCTAGCTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR GCA 72 bp CTTGGAAGAAAATTAGAAGATAAAATCAATCATGAGTaGTGGAGTAATGCAGTCATAGAAACTACCAGAAGG +
Preference number: 3 (lower is better)
Translates to: LGRKLEDKINHE*WSNAVIETTRR
Trigger: CCTTCTGGTAGTTTCTATGACTGCATTACTCCAGCACTCATGATTGATTTTATCTTCTAATTTTCTTCCAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR TCA 72 bp CATCTGACCTCAATATACTATAATACTCAGCATTCCTaGCTTAAGAGCTCTCAGAGCTTTAGATTATATACT +
Preference number: 3 (lower is better)
Translates to: HLTSIYYNTQHS*LKSSQSFRLYT
Trigger: AGTATATAATCTAAAGCTCTGAGAGCTCTTAAGTCAGGAATGCTGAGTATTATAGTATATTGAGGTCAGATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CCA 72 bp GGAAGAAAATTAGAAGATAAAATCAATCATGAGTGCTaGAGTAATGCAGTCATAGAAACTACCAGAAGGAAT +
Preference number: 3 (lower is better)
Translates to: GRKLEDKINHEC*SNAVIETTRRN
Trigger: ATTCCTTCTGGTAGTTTCTATGACTGCATTACTCCAGCACTCATGATTGATTTTATCTTCTAATTTTCTTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CCA 72 bp TCTAGATTGAAGTCACTTCAAGTAAGTAAAGCATCCTaGTTTAAACAAACGTATTTCTTCCTAAGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: SRLKSLQVSKAS*FKQTYFFLSLC
Trigger: ACAAAGGCTTAGGAAGAAATACGTTTGTTTAAACCAGGATGCTTTACTTACTTGAAGTGACTTCAATCTAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CCA 72 bp CAACCTGAGTGTAAAAGACATATGTTAAGTCTTCAGTaGCGAAACACTAAAACTAGAAATGGATCAGAATTT +
Preference number: 3 (lower is better)
Translates to: QPECKRHMLSLQ*RNTKTRNGSEF
Trigger: AAATTCTGATCCATTTCTAGTTTTAGTGTTTCGCCACTGAAGACTTAACATATGTCTTTTACACTCAGGTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGGCCCCGCCCCCGCGCTaGGGACGGAACTTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILAPPPR*GRNLPK
Trigger: CTTCGGCAAGTTCCGTCCCCAGCGCGGGGGCGGGGC...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430624.5
CDS-3UTR GCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTAAGCTCCTCCGTCACTaGTTTCGTTCACGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSKLLRH*FRSRPG
Trigger: TCCGGGCCGTGAACGAAAGCAGTGACGGAGGAGCTT...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp GAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCATGGTAGTACCCGGCTaGGTGGCTGCTGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: EDAITTPGAIVLVGAVRIMVVPG*VAAALV
Trigger: GACCAATGCAGCAGCCACTCAGCCGGGTACTACCAT...GATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAATGGTAGTACCCGGCTaGGTGGCTGCTGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLMVVPG*VAAALV
Trigger: GACCAATGCAGCAGCCACTCAGCCGGGTACTACCAT...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGAAGGTCCAAGCACCTaGACGTGGCAGGGTGACCCG +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAEGPST*TWQGDP
Trigger: CGGGTCACCCTGCCACGTTCAGGTGCTTGGACCTTC...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTAAGTGCTGGGGAGGATaGCATAACAACTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSKCWGG*HNNSRG
Trigger: GCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTT...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTACATGTCATACCCAGCTaGGACCTGCACCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLHVIPS*DLHPPY
Trigger: GTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATG...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCAGCTGGGCCGCCTGAATaGCTCCATGGACTTGAACTG +
Preference number: 4 (lower is better)
Translates to: SAQEAGVILSLRQSRSSAAGPPE*LHGLEL
Trigger: CAGTTCAAGTCCATGGAGTCATTCAGGCGGCCCAGC...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCAATGGTAGTACCCGGCTaGGTGGCTGCTGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: SAQEAGVILSLRQSRSSAMVVPG*VAAALV
Trigger: GACCAATGCAGCAGCCACTCAGCCGGGTACTACCAT...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCGCTGCCTCAACCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTAASTS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGTTGAGGCAGC...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAAGCTCCTCCGTCACTaGTTTCGTTCACGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTKLLRH*FRSRPG
Trigger: TCCGGGCCGTGAACGAAAGCAGTGACGGAGGAGCTT...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCATACCCAGCTGGGACCTaGACCCACCGTACCAGAATG +
Preference number: 4 (lower is better)
Translates to: SAQEAGVILSLRQSRSSAYPAGT*THRTRM
Trigger: CATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTA...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCAAGCAGATTGGTGGTTaGCAGGGACAAGGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTKQIGG*QGQGRW
Trigger: CCACCGCCCTTGTCCCTGGCAACCACCAATCTGCTT...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp GGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGGTGATGGCAGGTGCTaGAGTCTCCTCTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: GCHNNSRGNSASGCCANLGDGRC*SLLFRL
Trigger: AAGTCTGAAGAGGAGACTTCAGCACCTGCCATCACC...CAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTAAGGCGAAGGCGGGCTaGGCCCGGCGCCGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLKAKAG*ARRREE
Trigger: CTCCTCCCGGCGCCGGGCTCAGCCCGCCTTCGCCTT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430624.5
CDS-3UTR GCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTCTCTCTCTTTCGTGCTaGTTCTTCAGCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSLSLSC*FFSRLC
Trigger: ACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAG...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCGCATCTCCACTCTGCTaGTTCTCGGCTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTASPLC*FSAPDS
Trigger: GGAATCTGGAGCCGAGAACCAGCAGAGTGGAGATGC...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACACAGGCTGGAGTGCAATaGTGCTATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTQAGVQ*CYLGSL
Trigger: CAGTGAGCCGAGATAGCACCATTGCACTCCAGCCTG...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGCATGTCATACCCAGCTaGGACCTGCACCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILHVIPS*DLHPPY
Trigger: GTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATG...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CAA 72 bp ATACCCGGATGTAAATCCAAAGAAACAGGAAGCAGATaGGTGGTTGCCAGGGACAAGGGCGGTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: IPGCKSKETGSR*VVARDKGGGRR
Trigger: TCTCCTCCCACCGCCCTTGTCCCTGGCAACCACCAATCTGCTTCCTGTTTCTTTGGATTTACATCCGGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAATGACTCCATGGACTTaGACTGTCTGCCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTMTPWT*TVCPLG
Trigger: GCCCAATGGGCAGACAGTTCAAGTCCATGGAGTCAT...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTGCTGGGCCGCCTGAATaGCTCCATGGACTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGAGPPE*LHGLEL
Trigger: CAGTTCAAGTCCATGGAGTCATTCAGGCGGCCCAGC...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp ACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGTGGAGACTGAATAACTaGTGGCTGGGCCGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TPGAIVLVGAVRIWYVCTWRLNN*WLGRLN
Trigger: ATTCAGGCGGCCCAGCCATCAGTTATTCAGTCTCCA...CGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACATGGACTTGTGGAGACTaGATAACTGATGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTWTCGD*ITDGWA
Trigger: GGCCCAGCCATCAGTTATTCAGTCTCCACAAGTCCA...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGGTGATGGCAGGTGCTaGAGTCTCCTCTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTGDGRC*SLLFRL
Trigger: AAGTCTGAAGAGGAGACTTCAGCACCTGCCATCACC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTGCTGCCTCAACCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGAASTS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGTTGAGGCAGC...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGAGTCGGTCTGCCCCCTaGGGACACATACAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILSRSAP*GHIQRL
Trigger: AAGCCTTTGTATGTGTCCTCAGGGGGCAGACCGACT...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CGGACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTGCTGGGTCCTTACAGGAAGACTaGACTGTTTGGACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RTSLFRAASSAGCVGSAGSLQED*TVWTCG
Trigger: TCCACAAGTCCAAACAGTTCAGTCTTCCTGTAAGGA...CCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR GCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGTTAGCCAGCTGTATTaGTCCTCCCTGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTVSQLY*SSLGNG
Trigger: GCCATTACCCAGGGAGGAGCAATACAGCTGGCTAAC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp ACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGGTTAGCCAGCTGTATTaGTCCTCCCTGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: TPGAIVLVGAVRIWYVCTVSQLY*SSLGNG
Trigger: GCCATTACCCAGGGAGGAGCAATACAGCTGGCTAAC...CGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR GCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCGTTAGCCAGCTGTATTaGTCCTCCCTGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTVSQLY*SSLGNG
Trigger: GCCATTACCCAGGGAGGAGCAATACAGCTGGCTAAC...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp GGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAAAGTGCTGGGGAGGATaGCATAACAACTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GNSASGCCANLVCLYVSRKCWGG*HNNSRG
Trigger: GCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTT...TCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR GCA 90 bp GGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGCTCTCTCTTTCGTGCTaGTTCTTCAGCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GCHNNSRGNSASGCCANLLSLSC*FFSRLC
Trigger: ACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAG...CAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp GGAAGTGCTGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTCTCTTCTTCAATCCTTaGCACTCCTGGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: GSAGEDAITTPGAIVLVGLFFNP*HSWCIR
Trigger: TCTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAG...ACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp GGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGTGTAGGAAGTGCTaGGGAGGATGCCATAACAAC +
Preference number: 4 (lower is better)
Translates to: GGCHNNSRGNSASGCCANLCRKC*GGCHNN
Trigger: GTTGTTATGGCATCCTCCCCAGCACTTCCTACACAG...ATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATGGAGTCGCCCAGGCTaGAGTGCAATGGTGCTATCT +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAWSRPG*SAMVLS
Trigger: AGATAGCACCATTGCACTCCAGCCTGGGCGACTCCA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTACGGTGGGAGCAGATaGTGTTGCATGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGYGGSR*CCMSCW
Trigger: CCAGCAGCTCATGCAACATCATCTGCTCCCACCGTA...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATGGACTTGTGGAGACTaGATAACTGATGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAWTCGD*ITDGWA
Trigger: GGCCCAGCCATCAGTTATTCAGTCTCCACAAGTCCA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTATGGGGGAGTTACAACTaGCATGTGGACAAATCAGTC +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLWGSYN*HVDKSV
Trigger: GACTGATTTGTCCACATGTCAGTTGTAACTCCCCCA...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TGTTCTTCATTAGACGGACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGAGGCTGTGTAGGAAGTaGTGGGGAGGATGCCATAAC +
Preference number: 4 (lower is better)
Translates to: CSSLDGPLSFVLLLQQAVRLCRK*WGGCHN
Trigger: GTTATGGCATCCTCCCCAGCACTTCCTACACAGCCT...CACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTCCGTCTAATGAAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR GCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGCTCACTGCAACCCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILLTATL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGGTTGCAGTGAG...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCCTCTTAAAGTCGGTCTaGCCCCTGAGGACACATACA +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTLLKSV*PLRTHT
Trigger: TGTATGTGTCCTCAGGGGGCAGACCGACTTTAAGAG...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTCTCACTTCTCTGAGATaGTCCTCAGACAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSLTSLR*SSDKSL
Trigger: CAAGCTTTTGTCTGAGGAGCATCTCAGAGAAGTGAG...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACACGGCTCCAGATTCCATaGTCATTTAGTTACCGGTGG +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTRLQIP*SFSYRW
Trigger: CCACCGGTAACTAAATGACCATGGAATCTGGAGCCG...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCGCATCTCCACTCTGCTaGTTCTCGGCTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGASPLC*FSAPDS
Trigger: GGAATCTGGAGCCGAGAACCAGCAGAGTGGAGATGC...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGCAACAACTTGGTTGCTaGGCACTAAGATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GCHNNSRGNSASGCCANLQQLGC*ALRSAV
Trigger: GACAGCAGATCTTAGTGCCCAGCAACCAAGTTGTTG...CAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTCAGGGACAAGGGCGGTaGGAGGAGAAAATGGAGAGT +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGQGQGR*EEKMES
Trigger: ACTCTCCATTTTCTCCTCCCACCGCCCTTGTCCCTG...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCAAACAGGAAGCAGATTaGTGGTTGCCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTKQEAD*WLPGTR
Trigger: CCTTGTCCCTGGCAACCACCAATCTGCTTCCTGTTT...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGCTGGGCCGCCTGAATaGCTCCATGGACTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSAGPPE*LHGLEL
Trigger: CAGTTCAAGTCCATGGAGTCATTCAGGCGGCCCAGC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp TGTAGGAAGTGCTGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGTAGGAAGGCCTCCTTaGAAGAATTTCCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: CRKCWGGCHNNSRGNSASVGRPP*KNFPSL
Trigger: AAGCGAAGGGAAATTCTTTCAAGGAGGCCTTCCTAC...ACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGTAGGAAGGCCTCCTTaGAAGAATTTCCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTVGRPP*KNFPSL
Trigger: AAGCGAAGGGAAATTCTTTCAAGGAGGCCTTCCTAC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp ACGAGATGGAAAAACCAGCGGAAGGAAGATTTGGGGGAGAAGTTAAGTTTGTCTATGGTAGTACCCGGCTaGGTGGCTGCTGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: TRWKNQRKEDLGEKLSLSMVVPG*VAAALV
Trigger: GACCAATGCAGCAGCCACTCAGCCGGGTACTACCAT...AGACAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTGGTTTTTCCATCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGCGTTGAAAATTTCTTaGGGGGAGAAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAALKIS*GEKWRQ
Trigger: CTGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGC...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGGCGTTGAAAATTTCTTaGGGGGAGAAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILALKIS*GEKWRQ
Trigger: CTGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGC...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTGAGGAGGGTGGGGGTTaGAAAGCAGAAGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGEEGGG*KAEVSS
Trigger: TGAAGAGACTTCTGCTTTTCAACCCCCACCCTCCTC...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTAAATCCCTGCTCAAATaGAATGCCAAAATTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSKSLLK*NAKIPP
Trigger: GGGAGGAATTTTGGCATTTCATTTGAGCAGGGATTT...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTTTACTCTCACTTCTCTaGGATGCTCCTCAGACAAAA +
Preference number: 4 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSLLSLL*DAPQTK
Trigger: TTTTGTCTGAGGAGCATCTCAGAGAAGTGAGAGTAA...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATACCCTGTTTTGTGCTaGCAGTTGTGGGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAYPVLC*QLWGKS
Trigger: AGACTTCCCCCACAACTGTCAGCACAAAACAGGGTA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TTCATTAGACGGACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGACTGGGCACTAAGATCTaGTGTCCATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: FIRRTSLFRAASSAGCVGLGTKI*CPSVVC
Trigger: ACAGACCACTGATGGACAGCAGATCTTAGTGCCCAG...TCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTCCGTCTAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR GCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGCTGGGCACTAAGATCTaGTGTCCATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILLGTKI*CPSVVC
Trigger: ACAGACCACTGATGGACAGCAGATCTTAGTGCCCAG...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp GGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: GCHNNSRGNSASGCCANLNSASG*CANLVC
Trigger: ACATACCAGATTCGCACAGCACCCACTAGCACTATT...CAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR GCA 90 bp ACCTGGCTAACTGGTTGGAGTGCAGACATAGGGAAGTTGTGCATTAAATCTCCTAAGTGCTGGGGAGGATaGCATAACAACTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TWLTGWSADIGKLCIKSPKCWGG*HNNSRG
Trigger: GCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTT...AGGAGATTTAATGCACAACTTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR GCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCAGGCTGTGTAGGAAGTaGTGGGGAGGATGCCATAAC +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGRLCRK*WGGCHN
Trigger: GTTATGGCATCCTCCCCAGCACTTCCTACACAGCCT...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCGAACTGTCTGCCCATTaGGCAGCTGTACTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTELSAH*AAVLEL
Trigger: TAACTCTAGTACAGCTGCCCAATGGGCAGACAGTTC...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCCTCTTCTTCAATCCTTaGCACTCCTGGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTLFFNP*HSWCIR
Trigger: TCTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAG...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACACTGCTGCATTGGTCATaGTTAATGTTTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTLLHWS*LMFAGP
Trigger: AGGGCCTGCAAACATTAACCATGACCAATGCAGCAG...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TGTAGGAAGTGCTGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTCTGCTGCATTGGTCATaGTTAATGTTTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CRKCWGGCHNNSRGNSASLLHWS*LMFAGP
Trigger: AGGGCCTGCAAACATTAACCATGACCAATGCAGCAG...ACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACTGCTGCATTGGTCATaGTTAATGTTTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SAQEAGVILSLRQSRSSALLHWS*LMFAGP
Trigger: AGGGCCTGCAAACATTAACCATGACCAATGCAGCAG...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTATTGTCTTTCAGGTTGTaGCCAAGCCAGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLLSFRL*PSQSIF
Trigger: GAAAATGGACTGGCTTGGCCACAACCTGAAAGACAA...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGTGACTTCTCAAGGATaGTCTTGTCACTTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTVTSQG*SCHFSA
Trigger: GGCACTGAAGTGACAAGACCATCCTTGAGAAGTCAC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CAA 72 bp GATGTAAATCCAAAGAAACAGGAAGCAGATTGGTGGTaGCCAGGGACAAGGGCGGTGGGAGGAGAAAATGGA +
Preference number: 4 (lower is better)
Translates to: DVNPKKQEADWW*PGTRAVGGENG
Trigger: TCCATTTTCTCCTCCCACCGCCCTTGTCCCTGGCAACCACCAATCTGCTTCCTGTTTCTTTGGATTTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCAATACTCAGCATTCCTaGCTTAAGAGCTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTNTQHS*LKSSQS
Trigger: GCTCTGAGAGCTCTTAAGTCAGGAATGCTGAGTATT...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCACAGCCAGATGACATCTaGTGGGATAGGCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSQPDDI*WDRLPD
Trigger: GTCAGGCAGCCTATCCCATCAGATGTCATCTGGCTG...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGCAGCCAGATGACATCTaGTGGGATAGGCTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKQPDDI*WDRLPD
Trigger: GTCAGGCAGCCTATCCCATCAGATGTCATCTGGCTG...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTTACAGGGATTTATCCTaGGAGACAGAGATAAACTTC +
Preference number: 4 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSYRDLS*ETEINF
Trigger: GAAGTTTATCTCTGTCTCTCAGGATAAATCCCTGTA...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAACTGACTCAGCTTCATaGTATGTTCAGCCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTTDSAS*YVQPLK
Trigger: TTTGAGGGGCTGAACATATCATGAAGCTGAGTCAGT...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATGGGGGAGTTACAACTaGCATGTGGACAAATCAGTC +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAWGSYN*HVDKSV
Trigger: GACTGATTTGTCCACATGTCAGTTGTAACTCCCCCA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTTGGGCAATCTTTTCCTaGAGGTCCAAGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGWAIFS*RSKHLN
Trigger: GTTCAGGTGCTTGGACCTTCAGGAAAAGATTGCCCA...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAAGTGCTGGGGAGGATaGCATAACAACTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSKCWGG*HNNSRG
Trigger: GCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTT...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp ACCTGGCTAACTGGTTGGAGTGCAGACATAGGGAAGTTGTGCATTAAATCTCCTAGGCTGTGTAGGAAGTaGTGGGGAGGATGCCATAAC +
Preference number: 4 (lower is better)
Translates to: TWLTGWSADIGKLCIKSPRLCRK*WGGCHN
Trigger: GTTATGGCATCCTCCCCAGCACTTCCTACACAGCCT...AGGAGATTTAATGCACAACTTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR GCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTTCTGATGGGATAGGCTaGCTGACTGGTATTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLSDGIG*LTGIVL
Trigger: AAGCACAATACCAGTCAGGCAGCCTATCCCATCAGA...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCCTCTTAAAGTCGGTCTaGCCCCTGAGGACACATACA +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGLLKSV*PLRTHT
Trigger: TGTATGTGTCCTCAGGGGGCAGACCGACTTTAAGAG...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGCCCACCGTACCAGAATaGAGACAGGTCAGTATTTTC +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILPTVPE*RQVSIF
Trigger: GAAAATACTGACCTGTCTGCATTCTGGTACGGTGGG...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTGAAGAAACATACACGGCCCGGATCTCGCTaGAGTTTTATTCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: YNGRYSRLEHILAVKKHTRPGSR*SFILSP
Trigger: GGGGGAGAGAATAAAACTCCAGCGAGATCCGGGCCG...TGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGCTGGCATAGATACCTaGGCTAATGTGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLAGIDT*ANVAIC
Trigger: ACAGATTGCCACATTAGCCCAGGTATCTATGCCAGC...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTATGTATTGCTCCTCCCTaGGTAATGGCAATATACTGT +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLCIAPP*VMAIYC
Trigger: ACAGTATATTGCCATTACCCAGGGAGGAGCAATACA...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTCAACAACTTGGTTGCTaGGCACTAAGATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLQQLGC*ALRSAV
Trigger: GACAGCAGATCTTAGTGCCCAGCAACCAAGTTGTTG...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp ATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: IVLVGAVRIWYVCTSPEAGAVRI*YVCTSP
Trigger: TGGAGACGTACAAACATACCAGATTCGCACAGCACC...TGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTCTGTGTAGGAAGTGCTaGGGAGGATGCCATAACAAC +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGLCRKC*GGCHNN
Trigger: GTTGTTATGGCATCCTCCCCAGCACTTCCTACACAG...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGCAGGCTGGAGTGCAATaGTGCTATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKQAGVQ*CYLGSL
Trigger: CAGTGAGCCGAGATAGCACCATTGCACTCCAGCCTG...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGATAGGCTGCCTGACTaGTATTGTGCTTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNADRLPD*YCAFRD
Trigger: GTCTCTGAAAGCACAATACCAGTCAGGCAGCCTATC...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATGTCACTTCAGTGCCTaGTCAAATGACAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNACHFSA*SNDKMG
Trigger: GCCCATCTTGTCATTTGACCAGGCACTGAAGTGACA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp ACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGAAGTGGGGCACAGCTTaGATGATCTTCCTAGATAGA +
Preference number: 4 (lower is better)
Translates to: TPGAIVLVGAVRIWYVCTKWGTA*MIFLDR
Trigger: TCTATCTAGGAAGATCATCCAAGCTGTGCCCCACTT...CGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCAGCAGATGATGTTGCATaGGCTGCTGGCATAGATACC +
Preference number: 4 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSADDVA*AAGIDT
Trigger: GGTATCTATGCCAGCAGCTCATGCAACATCATCTGC...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCTACGGTGGGAGCAGATaGTGTTGCATGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAYGGSR*CCMSCW
Trigger: CCAGCAGCTCATGCAACATCATCTGCTCCCACCGTA...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGGGTGATGGCAGGTGCTaGAGTCTCCTCTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKGDGRC*SLLFRL
Trigger: AAGTCTGAAGAGGAGACTTCAGCACCTGCCATCACC...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCACATGATTCCTGGCGTTaGAAATTTCTTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAHDSWR*KFLEGR
Trigger: TCTCCCCTCAAGAAATTTTCAACGCCAGGAATCATG...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCAGCAGAAGTCTCTTCATaGTTCCTGGCGTTGAAAATT +
Preference number: 4 (lower is better)
Translates to: SAQEAGVILSLRQSRSSAAEVSS*FLALKI
Trigger: AATTTTCAACGCCAGGAATCATGAAGAGACTTCTGC...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGCAGAAGTCTCTTCATaGTTCCTGGCGTTGAAAATT +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTAEVSS*FLALKI
Trigger: AATTTTCAACGCCAGGAATCATGAAGAGACTTCTGC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGAGGAGGGTGGGGGTTaGAAAGCAGAAGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSEEGGG*KAEVSS
Trigger: TGAAGAGACTTCTGCTTTTCAACCCCCACCCTCCTC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCACTGGTCTTGAACTCTTaGCCACAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSLVLNS*PQVIHP
Trigger: TGGGTGGATCACCTGTGGTCAAGAGTTCAAGACCAG...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGACTGACTCAGCTTCATaGTATGTTCAGCCCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILTDSAS*YVQPLK
Trigger: TTTGAGGGGCTGAACATATCATGAAGCTGAGTCAGT...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCCTTATCATAAGCAGATaGGACAGATGGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTLIISR*DRWNFS
Trigger: GCTGAAGTTCCATCTGTCTCATCTGCTTATGATAAG...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp AGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGCACTTTCTGCAATAGTTaGAATCTGTGTTCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: SASGCCANLVCLYVSRGSTFCNS*NLCSGE
Trigger: TTCTCCGGAACACAGATTTCAACTATTGCAGAAAGT...GCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp GGAAGTGCTGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGACTCATCTTCAAACTaGCGTTCAGAATTCAAATTC +
Preference number: 4 (lower is better)
Translates to: GSAGEDAITTPGAIVLVGDSSSN*RSEFKF
Trigger: GAATTTGAATTCTGAACGTCAGTTTGAAGATGAGTC...ACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR GCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAACAACAACTTGGTTaGTGGGCACTAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLEQQLG*WALRSA
Trigger: AGCAGATCTTAGTGCCCAGCAACCAAGTTGTTGTTC...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGGAACAACAACTTGGTTaGTGGGCACTAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILEQQLG*WALRSA
Trigger: AGCAGATCTTAGTGCCCAGCAACCAAGTTGTTGTTC...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLNSASG*CANLVC
Trigger: ACATACCAGATTCGCACAGCACCCACTAGCACTATT...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNANSASG*CANLVC
Trigger: ACATACCAGATTCGCACAGCACCCACTAGCACTATT...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCACTCTCTCTTTCGTGCTaGTTCTTCAGCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSLSLSC*FFSRLC
Trigger: ACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAG...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACATACCCAGCTGGGACCTaGACCCACCGTACCAGAATG +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTYPAGT*THRTRM
Trigger: CATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTA...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp ACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGTTGGTAAATTGGAGTTaGCACCGTTACAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TPGAIVLVGAVRIWYVCTLVNWS*HRYSGD
Trigger: ATCACCACTGTAACGGTGCCAACTCCAATTTACCAA...CGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGCTAGTTTGGTAAATTaGAGTTGGCACCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTASLVN*SWHRYS
Trigger: ACTGTAACGGTGCCAACTCCAATTTACCAAACTAGC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp AGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCGCTAGTTTGGTAAATTaGAGTTGGCACCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: RGNSASGCCANLVCLYVSASLVN*SWHRYS
Trigger: ACTGTAACGGTGCCAACTCCAATTTACCAAACTAGC...GGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCGCTAGTTTGGTAAATTaGAGTTGGCACCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTASLVN*SWHRYS
Trigger: ACTGTAACGGTGCCAACTCCAATTTACCAAACTAGC...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCCAACAACTTGGTTGCTaGGCACTAAGATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGQQLGC*ALRSAV
Trigger: GACAGCAGATCTTAGTGCCCAGCAACCAAGTTGTTG...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTTCAGCTCAAGAGGCTaGGGTAATTCTGTCCCTAAG +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGFSSRG*GNSVPK
Trigger: CTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGAA...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCTGGAGTCGCCCAGGCTaGAGTGCAATGGTGCTATCT +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAWSRPG*SAMVLS
Trigger: AGATAGCACCATTGCACTCCAGCCTGGGCGACTCCA...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GGGTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGCTTAAGTCTAAGTCTAAAAGGTAAGTaGGGCACAGCTTGGATGATC +
Preference number: 4 (lower is better)
Translates to: GCCANLVCLYVSRGSLSLSLKGK*GTAWMI
Trigger: GATCATCCAAGCTGTGCCCCACTTACCTTTTAGACT...TAGACTTAAGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp TACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTGAAGAAACATACAATGACTCCATGGACTTaGACTGTCTGCCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: YNGRYSRLEHILAVKKHTMTPWT*TVCPLG
Trigger: GCCCAATGGGCAGACAGTTCAAGTCCATGGAGTCAT...TGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAACTTTCTGCAATAGTTaGAATCTGAACTGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLTFCNS*NLNCLD
Trigger: GTCCAAACAGTTCAGATTTCAACTATTGCAGAAAGT...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000430624.5
CDS-3UTR TCA 90 bp CTGCATGAAAGAAAACTACTCCACGATCAAAGATTGACCCATAATCATACAGCTATGGTAGTACCCGGCTaGGTGGCTGCTGCATTGGTC +
Preference number: 4 (lower is better)
Translates to: LHERKLLHDQRLTHNHTAMVVPG*VAAALV
Trigger: GACCAATGCAGCAGCCACTCAGCCGGGTACTACCAT...AGCTGTATGATTATGGGTCAATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR TCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCGAGGAGGGTGGGGGTTaGAAAGCAGAAGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAEEGGG*KAEVSS
Trigger: TGAAGAGACTTCTGCTTTTCAACCCCCACCCTCCTC...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTATTCACAATGAGAATGTaGCAACATGTCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLFTMRM*QHVNLA
Trigger: TGCCAAATTGACATGTTGTCACATTCTCATTGTGAA...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAGAACACATACAGAACTaGATTAAGAAGCAACAACTG +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLEHIQN*IKKQQL
Trigger: CAGTTGTTGCTTCTTAATTCAGTTCTGTATGTGTTC...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGTACCCTGTTTTGTGCTaGCAGTTGTGGGGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: IAPYLLYACGPHITSAQEYPVLC*QLWGKS
Trigger: AGACTTCCCCCACAACTGTCAGCACAAAACAGGGTA...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGCTGGGCACTAAGATCTaGTGTCCATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IAPYLLYACGPHITSAQELGTKI*CPSVVC
Trigger: ACAGACCACTGATGGACAGCAGATCTTAGTGCCCAG...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAACTGGGCACTAAGATCTaGTGTCCATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKLGTKI*CPSVVC
Trigger: ACAGACCACTGATGGACAGCAGATCTTAGTGCCCAG...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACATACTTACTTTATGCATaGGGCCCACACATTACTTCA +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTYLLYA*GPHITS
Trigger: TGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTA...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTACCTTACTTACTTTATaGATGCGGCCCACACATTAC +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLTLLTL*MRPTHY
Trigger: GTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGT...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCATCTGATGGGATAGGCTaGCTGACTGGTATTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSSDGIG*LTGIVL
Trigger: AAGCACAATACCAGTCAGGCAGCCTATCCCATCAGA...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTCTCACTTCTCTGAGATaGTCCTCAGACAAAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGLTSLR*SSDKSL
Trigger: CAAGCTTTTGTCTGAGGAGCATCTCAGAGAAGTGAG...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACAGCATCTCCACTCTGCTaGTTCTCGGCTCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTASPLC*FSAPDS
Trigger: GGAATCTGGAGCCGAGAACCAGCAGAGTGGAGATGC...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGATACCTGGGCTAATGTaGCAATCTGTGGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: IAPYLLYACGPHITSAQEIPGLM*QSVAGL
Trigger: AAGCCCAGCCACAGATTGCCACATTAGCCCAGGTAT...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCACTCTTCTTCAATCCTTaGCACTCCTGGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSLFFNP*HSWCIR
Trigger: TCTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAG...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTTGGTAAATTGGAGTTaGCACCGTTACAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILLVNWS*HRYSGD
Trigger: ATCACCACTGTAACGGTGCCAACTCCAATTTACCAA...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAAGTGGAGGCAGGTGTTaGAACATTCACAGTTTAATG +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNASGGRC*NIHSLM
Trigger: CATTAAACTGTGAATGTTCCAACACCTGCCTCCACT...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTATTATTACTGGTAATGTaGCCACATATGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLLLLVM*PHMFLA
Trigger: AGCCAAGAACATATGTGGCCACATTACCAGTAATAA...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGATAAAAGTGCCACATaGCCCTATATTTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTDKSAT*PYICKV
Trigger: CACTTTGCAAATATAGGGCCATGTGGCACTTTTATC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCAGATAGGCTGCCTGACTaGTATTGTGCTTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSDRLPD*YCAFRD
Trigger: GTCTCTGAAAGCACAATACCAGTCAGGCAGCCTATC...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTCATTCAAACGTTATCTaGTCCCTCTTAAAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLHSNVI*SLLKSV
Trigger: GACCGACTTTAAGAGGGACCAGATAACGTTTGAATG...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CAA 72 bp CCACTTACGAGATGGAAAAACCAGCGGAAGGAAGATTaGGGGGAGAAGTTAAGTTTGTCTTGGGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PLTRWKNQRKED*GEKLSLSWACV
Trigger: AACACAGGCCCAAGACAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTGGTTTTTCCATCTCGTAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CAA 72 bp ACCTGGCTAACTGGTTGGAGTGCAGACATAGGGAAGTaGTGCATTAAATCTCCTGTGGGGAAACTGCATGAA +
Preference number: 4 (lower is better)
Translates to: TWLTGWSADIGK*CIKSPVGKLHE
Trigger: TTCATGCAGTTTCCCCACAGGAGATTTAATGCACAACTTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR TCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCGCAGATGATGTTGCATaGGCTGCTGGCATAGATACC +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAADDVA*AAGIDT
Trigger: GGTATCTATGCCAGCAGCTCATGCAACATCATCTGC...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp TTAAGTCTAAAAGGTAAGTGGGGCACAGCTTGGATGATCTTCCTAGATAGAGTATGGACTTGTGGAGACTaGATAACTGATGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLKGKWGTAWMIFLDRVWTCGD*ITDGWA
Trigger: GGCCCAGCCATCAGTTATTCAGTCTCCACAAGTCCA...TACTCTATCTAGGAAGATCATCCAAGCTGTGCCCCACTTACCTTTTAGACTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTATGGACTTGTGGAGACTaGATAACTGATGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLWTCGD*ITDGWA
Trigger: GGCCCAGCCATCAGTTATTCAGTCTCCACAAGTCCA...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCGAACACATACAGAACTaGATTAAGAAGCAACAACTG +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTEHIQN*IKKQQL
Trigger: CAGTTGTTGCTTCTTAATTCAGTTCTGTATGTGTTC...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCCTTAATCCTGCAAAATaGAGCAGCCGTGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGLNPAK*SSRDLQ
Trigger: TTGAAGATCACGGCTGCTTCATTTTGCAGGATTAAG...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGAGTCGGTCTGCCCCCTaGGGACACATACAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHASRSAP*GHIQRL
Trigger: AAGCCTTTGTATGTGTCCTCAGGGGGCAGACCGACT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCCAACTGCTACTATTCTaGACACAAAGCAGCTATTAT +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTQLLLF*TQSSYY
Trigger: ATAATAGCTGCTTTGTGTTCAGAATAGTAGCAGTTG...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTCAAAATAAGTGTTGGTaGAGGTGTGGAGAAATTGGA +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLQNKCW*RCGEIG
Trigger: TCCAATTTCTCCACACCTTCACCAACACTTATTTTG...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAAAGCTTCTGTTACAGCTaGATCTCCACTCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQSFCYS*ISTLLV
Trigger: AACCAGCAGAGTGGAGATGCAGCTGTAACAGAAGCT...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGCTTCTGTTACAGCTaGATCTCCACTCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSSFCYS*ISTLLV
Trigger: AACCAGCAGAGTGGAGATGCAGCTGTAACAGAAGCT...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAGTTAGCCAGCTGTATTaGTCCTCCCTGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLVSQLY*SSLGNG
Trigger: GCCATTACCCAGGGAGGAGCAATACAGCTGGCTAAC...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp ACCTGGCTAACTGGTTGGAGTGCAGACATAGGGAAGTTGTGCATTAAATCTCCTGAACAACAACTTGGTTaGTGGGCACTAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: TWLTGWSADIGKLCIKSPEQQLG*WALRSA
Trigger: AGCAGATCTTAGTGCCCAGCAACCAAGTTGTTGTTC...AGGAGATTTAATGCACAACTTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR GCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAAGGCTGTGTAGGAAGTaGTGGGGAGGATGCCATAAC +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLRLCRK*WGGCHN
Trigger: GTTATGGCATCCTCCCCAGCACTTCCTACACAGCCT...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTTACTTACTTTATGCATaGGGCCCACACATTACTTCA +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLYLLYA*GPHITS
Trigger: TGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTA...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTATCAACACTTCTTCATTaGACCTTACTTACTTTATGC +
Preference number: 4 (lower is better)
Translates to: ACGPHITSAQEAGVILSLSTLLH*TLLTLC
Trigger: GCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGA...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACACTCACTGCAACCCTCTaGCTCCTGGGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTLTATL*LLGSSN
Trigger: ATTGCTTGAACCCAGGAGGCAGAGGGTTGCAGTGAG...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAGCTGGGGACGGAACTTaGCGAAGACCTTCGGGTTTC +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAAGDGT*RRPSGF
Trigger: GAAACCCGAAGGTCTTCGGCAAGTTCCGTCCCCAGC...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430624.5
CDS-3UTR CCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACGGCCCGGATCTCGCTaGAGTTTTATTCTCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIARPGSR*SFILSP
Trigger: GGGGGAGAGAATAAAACTCCAGCGAGATCCGGGCCG...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGAACTGTCTGCCCATTaGGCAGCTGTACTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSELSAH*AAVLEL
Trigger: TAACTCTAGTACAGCTGCCCAATGGGCAGACAGTTC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAATTTCCCTTCGCTTTTaGGAATCAGTTACACTATCC +
Preference number: 4 (lower is better)
Translates to: GNSASGCCANLVCLYVSRISLRF*ESVTLS
Trigger: GGATAGTGTAACTGATTCCCAAAAGCGAAGGGAAAT...TCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTATTTCCCTTCGCTTTTaGGAATCAGTTACACTATCC +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLISLRF*ESVTLS
Trigger: GGATAGTGTAACTGATTCCCAAAAGCGAAGGGAAAT...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCACTCTTCTTCAATCCTTaGCACTCCTGGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSLFFNP*HSWCIR
Trigger: TCTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAG...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAAGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKGAVRI*YVCTSP
Trigger: TGGAGACGTACAAACATACCAGATTCGCACAGCACC...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSGAVRI*YVCTSP
Trigger: TGGAGACGTACAAACATACCAGATTCGCACAGCACC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKGAVRI*YVCTSP
Trigger: TGGAGACGTACAAACATACCAGATTCGCACAGCACC...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCCTGTGTAGGAAGTGCTaGGGAGGATGCCATAACAAC +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVALCRKC*GGCHNN
Trigger: GTTGTTATGGCATCCTCCCCAGCACTTCCTACACAG...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTGCAACAACTGCCCTATaGAAGAGCTGTATTAGTACA +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGATTAL*KSCIST
Trigger: TGTACTAATACAGCTCTTCCATAGGGCAGTTGTTGC...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGAGGCTTTCTTGGTGGTaGTATGTAAGTGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: IAPYLLYACGPHITSAQERLSWW*YVSAMG
Trigger: GCCCATTGCACTTACATACCACCACCAAGAAAGCCT...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCCATTCAAACGTTATCTaGTCCCTCTTAAAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGHSNVI*SLLKSV
Trigger: GACCGACTTTAAGAGGGACCAGATAACGTTTGAATG...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCCCTCAGACAAAAGCTTaGAAATGCCATACTTCTATA +
Preference number: 4 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTPQTKA*KCHTSI
Trigger: TATAGAAGTATGGCATTTCCAAGCTTTTGTCTGAGG...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp ACCTGGCTAACTGGTTGGAGTGCAGACATAGGGAAGTTGTGCATTAAATCTCCTAATAACCTGGCTAACTaGTTGGAGTGCAGACATAGG +
Preference number: 4 (lower is better)
Translates to: TWLTGWSADIGKLCIKSPNNLAN*LECRHR
Trigger: CCTATGTCTGCACTCCAACCAGTTAGCCAGGTTATT...AGGAGATTTAATGCACAACTTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455757.1
3UTR CAA 72 bp AACCAGCGGAAGGAAGATTTGGGGGAGAAGTTAAGTTaGTCTTGGGCCTGTGTTTTGCAACCTGAGTGTAAA +
Preference number: 4 (lower is better)
Translates to: NQRKEDLGEKLS*SWACVLQPECK
Trigger: TTTACACTCAGGTTGCAAAACACAGGCCCAAGACAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CAA 72 bp AATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGCTTAAGTCTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: NSASGCCANLVC*YVSRGSLSLKG
Trigger: ACCTTTTAGACTTAAGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR TCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGATGACTCCATGGACTTaGACTGTCTGCCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHAMTPWT*TVCPLG
Trigger: GCCCAATGGGCAGACAGTTCAAGTCCATGGAGTCAT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGTGGAGACTGAATAACTaGTGGCTGGGCCGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHAWRLNN*WLGRLN
Trigger: ATTCAGGCGGCCCAGCCATCAGTTATTCAGTCTCCA...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCGTAGGAAGGCCTCCTTaGAAGAATTTCCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAVGRPP*KNFPSL
Trigger: AAGCGAAGGGAAATTCTTTCAAGGAGGCCTTCCTAC...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTTCACAATGAGAATGTaGCAACATGTCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILFTMRM*QHVNLA
Trigger: TGCCAAATTGACATGTTGTCACATTCTCATTGTGAA...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTTTCACAATGAGAATGTaGCAACATGTCAATTTGGCA +
Preference number: 4 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLFTMRM*QHVNLA
Trigger: TGCCAAATTGACATGTTGTCACATTCTCATTGTGAA...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGCTGGTCTTGAACTCTTaGCCACAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHALVLNS*PQVIHP
Trigger: TGGGTGGATCACCTGTGGTCAAGAGTTCAAGACCAG...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGATTTATGGTAATAGCTaGCTGTGGCTGATCATAGAA +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILIYGNS*LWLIIE
Trigger: TTCTATGATCAGCCACAGTCAGCTATTACCATAAAT...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATGTGCTTTGTACAACTaGGTGAACTATTTATCTCAC +
Preference number: 4 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNACALYN*VNYLSH
Trigger: GTGAGATAAATAGTTCACTCAGTTGTACAAAGCACA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGCAACTGCTACTATTCTaGACACAAAGCAGCTATTAT +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILQLLLF*TQSSYY
Trigger: ATAATAGCTGCTTTGTGTTCAGAATAGTAGCAGTTG...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAATCCTTACAGGAAGACTaGACTGTTTGGACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQSLQED*TVWTCG
Trigger: TCCACAAGTCCAAACAGTTCAGTCTTCCTGTAAGGA...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000432329.6
CDS-3UTR GCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGAACAACAACTTGGTTaGTGGGCACTAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: IAPYLLYACGPHITSAQEEQQLG*WALRSA
Trigger: AGCAGATCTTAGTGCCCAGCAACCAAGTTGTTGTTC...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTAAGTGCTGGGGAGGATaGCATAACAACTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLKCWGG*HNNSRG
Trigger: GCCCCTGGAGTTGTTATGGCATCCTCCCCAGCACTT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGAGGCTGTGTAGGAAGTaGTGGGGAGGATGCCATAAC +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHARLCRK*WGGCHN
Trigger: GTTATGGCATCCTCCCCAGCACTTCCTACACAGCCT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp TTGTGCATTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATCTCTCTCTTTCGTGCTaGTTCTTCAGCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LCIKSPVGKLHERKLLHDLSLSC*FFSRLC
Trigger: ACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAG...ATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAATGCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR GCA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCATCAACACTTCTTCATTaGACCTTACTTACTTTATGC +
Preference number: 4 (lower is better)
Translates to: SAQEAGVILSLRQSRSSASTLLH*TLLTLC
Trigger: GCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGA...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCACATGAATGTGATTaGCTTGATTTATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LYACGPHITSAQEAGVILSHECD*LDLSGT
Trigger: AGTCCCTGATAAATCAAGGCAATCACATTCATGTGA...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTTACCACTGTTATAGCTaGCACAGACAAAGCATACAA +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGYHCYS*HRQSIQ
Trigger: TTGTATGCTTTGTCTGTGGCAGCTATAACAGTGGTA...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAATACCTGGGCTAATGTaGCAATCTGTGGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLIPGLM*QSVAGL
Trigger: AAGCCCAGCCACAGATTGCCACATTAGCCCAGGTAT...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCATTGGTAAATTGGAGTTaGCACCGTTACAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSLVNWS*HRYSGD
Trigger: ATCACCACTGTAACGGTGCCAACTCCAATTTACCAA...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GTGCTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGCTTAAGTCTAAATGTATTGCTCCTCCCTaGGTAATGGCAATATACTGT +
Preference number: 4 (lower is better)
Translates to: VLCESGMFVRLQRQLKSKCIAPP*VMAIYC
Trigger: ACAGTATATTGCCATTACCCAGGGAGGAGCAATACA...TTTAGACTTAAGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACACTGTGTAGGAAGTGCTaGGGAGGATGCCATAACAAC +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTLCRKC*GGCHNN
Trigger: GTTGTTATGGCATCCTCCCCAGCACTTCCTACACAG...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGTTGTCTTTCAGGTTGTaGCCAAGCCAGTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKLSFRL*PSQSIF
Trigger: GAAAATGGACTGGCTTGGCCACAACCTGAAAGACAA...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAGACAACATGTCAATTTaGCAATCAACACTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTDNMSI*QSTLLH
Trigger: ATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTC...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTGAAGAAACATACAGGTGGGAGGAGAAAATaGAGAGTAACGGGACTTTAC +
Preference number: 4 (lower is better)
Translates to: YNGRYSRLEHILAVKKHTGGRRK*RVTGLY
Trigger: GTAAAGTCCCGTTACTCTCCATTTTCTCCTCCCACC...TGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTTGGAGACTGAATAACTaGTGGCTGGGCCGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLWRLNN*WLGRLN
Trigger: ATTCAGGCGGCCCAGCCATCAGTTATTCAGTCTCCA...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCATGGAGACTGAATAACTaGTGGCTGGGCCGCCTGAAT +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAWRLNN*WLGRLN
Trigger: ATTCAGGCGGCCCAGCCATCAGTTATTCAGTCTCCA...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp TACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTGAAGAAACATACACATGATTCCTGGCGTTaGAAATTTCTTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: YNGRYSRLEHILAVKKHTHDSWR*KFLEGR
Trigger: TCTCCCCTCAAGAAATTTTCAACGCCAGGAATCATG...TGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTTCATCATTAAGCAACTaGCTTCAAAACCAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGSSLSN*LQNQCN
Trigger: ATTGCACTGGTTTTGAAGTCAGTTGCTTAATGATGA...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAAAAATCCCTGCTCAAATaGAATGCCAAAATTCCTCCC +
Preference number: 4 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKKSLLK*NAKIPP
Trigger: GGGAGGAATTTTGGCATTTCATTTGAGCAGGGATTT...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGTTACTCTCACTTCTCTaGGATGCTCCTCAGACAAAA +
Preference number: 4 (lower is better)
Translates to: IAPYLLYACGPHITSAQELLSLL*DAPQTK
Trigger: TTTTGTCTGAGGAGCATCTCAGAGAAGTGAGAGTAA...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCGAGCATTATGACAGTTaGTACCACAAAGATTACAGT +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGEHYDS*YHKDYS
Trigger: ACTGTAATCTTTGTGGTATCAACTGTCATAATGCTC...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCATGTGCGATTTCAACATaGCCCAGCAACTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIACAIST*PSNSTP
Trigger: GGGAGTGGAGTTGCTGGGTCATGTTGAAATCGCACA...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp ACCTGGCTAACTGGTTGGAGTGCAGACATAGGGAAGTTGTGCATTAAATCTCCTTCCACGATCAAAGATTaGCCCATAATCATACAGCTA +
Preference number: 4 (lower is better)
Translates to: TWLTGWSADIGKLCIKSPSTIKD*PIIIQL
Trigger: TAGCTGTATGATTATGGGTCAATCTTTGATCGTGGA...AGGAGATTTAATGCACAACTTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR GCA 90 bp TTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATCAAAGATCTGGGCACTAAGATCTaGTGTCCATCAGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LNLLWGNCMKENYSTIKDLGTKI*CPSVVC
Trigger: ACAGACCACTGATGGACAGCAGATCTTAGTGCCCAG...ATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR GCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACCCACCGTACCAGAATaGAGACAGGTCAGTATTTTC +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLPTVPE*RQVSIF
Trigger: GAAAATACTGACCTGTCTGCATTCTGGTACGGTGGG...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACATCATTTAGTTACCGGTaGTACAAGCTCCTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTSFSYR*YKLLRH
Trigger: GTGACGGAGGAGCTTGTACCACCGGTAACTAAATGA...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGATACCTGGGCTAATGTaGCAATCTGTGGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHAIPGLM*QSVAGL
Trigger: AAGCCCAGCCACAGATTGCCACATTAGCCCAGGTAT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACAGCTGGCATAGATACCTaGGCTAATGTGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTAGIDT*ANVAIC
Trigger: ACAGATTGCCACATTAGCCCAGGTATCTATGCCAGC...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCGTACTAGAGTTACGGTaGGAGCAGATGATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAVLELR*EQMMLH
Trigger: ATGCAACATCATCTGCTCCCACCGTAACTCTAGTAC...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGTTGGTAAATTGGAGTTaGCACCGTTACAGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IAPYLLYACGPHITSAQELVNWS*HRYSGD
Trigger: ATCACCACTGTAACGGTGCCAACTCCAATTTACCAA...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTGCTGCATTGGTCATaGTTAATGTTTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLLLHWS*LMFAGP
Trigger: AGGGCCTGCAAACATTAACCATGACCAATGCAGCAG...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TTGTGCATTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCIKSPVGKLHERKLLHDGAVRI*YVCTSP
Trigger: TGGAGACGTACAAACATACCAGATTCGCACAGCACC...ATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAATGCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CCA 90 bp CTGCATGAAAGAAAACTACTCCACGATCAAAGATTGACCCATAATCATACAGCTCTGTGTAGGAAGTGCTaGGGAGGATGCCATAACAAC +
Preference number: 4 (lower is better)
Translates to: LHERKLLHDQRLTHNHTALCRKC*GGCHNN
Trigger: GTTGTTATGGCATCCTCCCCAGCACTTCCTACACAG...AGCTGTATGATTATGGGTCAATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTATTCAGCTCAAGAGGCTaGGGTAATTCTGTCCCTAAG +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLFSSRG*GNSVPK
Trigger: CTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGAA...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGGCAACAACTGCCCTATaGAAGAGCTGTATTAGTACA +
Preference number: 4 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKATTAL*KSCIST
Trigger: TGTACTAATACAGCTCTTCCATAGGGCAGTTGTTGC...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAAGGCTTTCTTGGTGGTaGTATGTAAGTGCAATGGGC +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLRLSWW*YVSAMG
Trigger: GCCCATTGCACTTACATACCACCACCAAGAAAGCCT...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTATCAATCATGAGTGCTaGAGTAATGCAGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGINHEC*SNAVIE
Trigger: TTCTATGACTGCATTACTCCAGCACTCATGATTGAT...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CTGCATGAAAGAAAACTACTCCACGATCAAAGATTGACCCATAATCATACAGCTACCTGGCTAACTGGTTaGAGTGCAGACATAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LHERKLLHDQRLTHNHTATWLTG*SADIGK
Trigger: CTTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGT...AGCTGTATGATTATGGGTCAATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR TCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTGCAGATGATGTTGCATaGGCTGCTGGCATAGATACC +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLADDVA*AAGIDT
Trigger: GGTATCTATGCCAGCAGCTCATGCAACATCATCTGC...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGTAGGAAGGCCTCCTTaGAAGAATTTCCCTTCGCTT +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHAVGRPP*KNFPSL
Trigger: AAGCGAAGGGAAATTCTTTCAAGGAGGCCTTCCTAC...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTGCGTTGAAAATTTCTTaGGGGGAGAAGTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLALKIS*GEKWRQ
Trigger: CTGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGC...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACACATGATTCCTGGCGTTaGAAATTTCTTGAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTHDSWR*KFLEGR
Trigger: TCTCCCCTCAAGAAATTTTCAACGCCAGGAATCATG...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR TCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGTAATACACAGTGTATaGGTCTCACATGAAATACCC +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSVIHSV*VSHEIP
Trigger: GGGTATTTCATGTGAGACTCATACACTGTGTATTAC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGAGCTTCTGTTACAGCTaGATCTCCACTCTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHASFCYS*ISTLLV
Trigger: AACCAGCAGAGTGGAGATGCAGCTGTAACAGAAGCT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp TTAAGTCTAAAAGGTAAGTGGGGCACAGCTTGGATGATCTTCCTAGATAGAGTAGAACAACAACTTGGTTaGTGGGCACTAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: LSLKGKWGTAWMIFLDRVEQQLG*WALRSA
Trigger: AGCAGATCTTAGTGCCCAGCAACCAAGTTGTTGTTC...TACTCTATCTAGGAAGATCATCCAAGCTGTGCCCCACTTACCTTTTAGACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR GCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTCTCTCTCTTTCGTGCTaGTTCTTCAGCAGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLLSLSC*FFSRLC
Trigger: ACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAG...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAGGGTTCAAGCAATTCTaGTGCCTCAACCTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAGFKQF*CLNLLS
Trigger: ACTCAGGAGGTTGAGGCAGCAGAATTGCTTGAACCC...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCAAAATCAATCATGAGTaGTGGAGTAATGCAGTCATA +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGKINHE*WSNAVI
Trigger: TATGACTGCATTACTCCAGCACTCATGATTGATTTT...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp ACGAGATGGAAAAACCAGCGGAAGGAAGATTTGGGGGAGAAGTTAAGTTTGTCTTACCACTGTTATAGCTaGCACAGACAAAGCATACAA +
Preference number: 4 (lower is better)
Translates to: TRWKNQRKEDLGEKLSLSYHCYS*HRQSIQ
Trigger: TTGTATGCTTTGTCTGTGGCAGCTATAACAGTGGTA...AGACAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTGGTTTTTCCATCTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTCTCTGTGAGGACAATTaGTTTAAAAAGTCTTGTACT +
Preference number: 4 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGLCEDN*FKKSCT
Trigger: AGTACAAGACTTTTTAAAGCAATTGTCCTCACAGAG...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TTGTGCATTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATGACATAGGGAAGTTGTaGATTAAATCTCCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LCIKSPVGKLHERKLLHDDIGKL*IKSPVG
Trigger: CCCCACAGGAGATTTAATGCACAACTTCCCTATGTC...ATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAATGCACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGTCATTTAGTTACCGGTaGTACAAGCTCCTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHASFSYR*YKLLRH
Trigger: GTGACGGAGGAGCTTGTACCACCGGTAACTAAATGA...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCTGGCATAGATACCTaGGCTAATGTGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHAAGIDT*ANVAIC
Trigger: ACAGATTGCCACATTAGCCCAGGTATCTATGCCAGC...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGATTTCCCTTCGCTTTTaGGAATCAGTTACACTATCC +
Preference number: 4 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKISLRF*ESVTLS
Trigger: GGATAGTGTAACTGATTCCCAAAAGCGAAGGGAAAT...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCTGTATTGCTCCTCCCTaGGTAATGGCAATATACTGT +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVACIAPP*VMAIYC
Trigger: ACAGTATATTGCCATTACCCAGGGAGGAGCAATACA...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CTGCATGAAAGAAAACTACTCCACGATCAAAGATTGACCCATAATCATACAGCTCTGCTGCATTGGTCATaGTTAATGTTTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LHERKLLHDQRLTHNHTALLHWS*LMFAGP
Trigger: AGGGCCTGCAAACATTAACCATGACCAATGCAGCAG...AGCTGTATGATTATGGGTCAATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CCA 90 bp CTGCATGAAAGAAAACTACTCCACGATCAAAGATTGACCCATAATCATACAGCTCAACAACTTGGTTGCTaGGCACTAAGATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LHERKLLHDQRLTHNHTAQQLGC*ALRSAV
Trigger: GACAGCAGATCTTAGTGCCCAGCAACCAAGTTGTTG...AGCTGTATGATTATGGGTCAATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCAGTGGAGGCAGGTGTTaGAACATTCACAGTTTAATG +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVASGGRC*NIHSLM
Trigger: CATTAAACTGTGAATGTTCCAACACCTGCCTCCACT...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCGACAACATGTCAATTTaGCAATCAACACTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGDNMSI*QSTLLH
Trigger: ATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTC...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCACCACTTACGAGATaGAAAAACCAGCGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHAAPLTR*KNQRKE
Trigger: TTCCTTCCGCTGGTTTTTCCATCTCGTAAGTGGTGC...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp TACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTGAAGAAACATACACTCATACATCAATGGTaGAAGGTAAAACGGTACAGC +
Preference number: 4 (lower is better)
Translates to: YNGRYSRLEHILAVKKHTLIHQW*KVKRYS
Trigger: GCTGTACCGTTTTACCTTCCACCATTGATGTATGAG...TGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAAAAGGTGTGGAGAAATTaGAACCCTCATACATCAATG +
Preference number: 4 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKKVWRN*NPHTSM
Trigger: CATTGATGTATGAGGGTTCCAATTTCTCCACACCTT...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAGTGTTGGTGAAGGTGTaGAGAAATTGGAACCCTCAT +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLVLVKV*RNWNPH
Trigger: ATGAGGGTTCCAATTTCTCCACACCTTCACCAACAC...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CAA 72 bp TTTGATGTCAGGCCCGTGTTAGAATTCTCATCCGGTTaGGTCACTGCACTTAAGAAAGATGTGGAGAAATTA +
Preference number: 4 (lower is better)
Translates to: FDVRPVLEFSSG*VTALKKDVEKL
Trigger: TAATTTCTCCACATCTTTCTTAAGTGCAGTGACCAAACCGGATGAGAATTCTAACACGGGCCTGACATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAAACTTTCTGCAATAGTTaGAATCTGAACTGTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQTFCNS*NLNCLD
Trigger: GTCCAAACAGTTCAGATTTCAACTATTGCAGAAAGT...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAAGAACACATACAGAACTaGATTAAGAAGCAACAACTG +
Preference number: 4 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKEHIQN*IKKQQL
Trigger: CAGTTGTTGCTTCTTAATTCAGTTCTGTATGTGTTC...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCTACAGGGATTTATCCTaGGAGACAGAGATAAACTTC +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAYRDLS*ETEINF
Trigger: GAAGTTTATCTCTGTCTCTCAGGATAAATCCCTGTA...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGATTTATGGTAATAGCTaGCTGTGGCTGATCATAGAA +
Preference number: 4 (lower is better)
Translates to: IAPYLLYACGPHITSAQEIYGNS*LWLIIE
Trigger: TTCTATGATCAGCCACAGTCAGCTATTACCATAAAT...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp ACGAGATGGAAAAACCAGCGGAAGGAAGATTTGGGGGAGAAGTTAAGTTTGTCTGAGCATTATGACAGTTaGTACCACAAAGATTACAGT +
Preference number: 4 (lower is better)
Translates to: TRWKNQRKEDLGEKLSLSEHYDS*YHKDYS
Trigger: ACTGTAATCTTTGTGGTATCAACTGTCATAATGCTC...AGACAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTGGTTTTTCCATCTCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp CTGCATGAAAGAAAACTACTCCACGATCAAAGATTGACCCATAATCATACAGCTTGTGGGGAAACTGCATaGAAGAAAACTACTCCACGA +
Preference number: 4 (lower is better)
Translates to: LHERKLLHDQRLTHNHTACGETA*KKTTPR
Trigger: TCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACA...AGCTGTATGATTATGGGTCAATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR GCA 90 bp TTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATCAAAGATAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: LNLLWGNCMKENYSTIKDNSASG*CANLVC
Trigger: ACATACCAGATTCGCACAGCACCCACTAGCACTATT...ATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR GCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGCTTGGGCCTGTGTTTTaGAACCTGAGTGTAAAAGAC +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHALGPVF*NLSVKD
Trigger: GTCTTTTACACTCAGGTTGCAAAACACAGGCCCAAG...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp TTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATCAAAGATCTCCTGTGGGGAAACTaGATGAAAGAAAACTACTCC +
Preference number: 4 (lower is better)
Translates to: LNLLWGNCMKENYSTIKDLLWGN*MKENYS
Trigger: GGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAG...ATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGTACTAGAGTTACGGTaGGAGCAGATGATGTTGCAT +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHAVLELR*EQMMLH
Trigger: ATGCAACATCATCTGCTCCCACCGTAACTCTAGTAC...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAGAACTGTCTGCCCATTaGGCAGCTGTACTAGAGTTA +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAELSAH*AAVLEL
Trigger: TAACTCTAGTACAGCTGCCCAATGGGCAGACAGTTC...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCATTTCCCTTCGCTTTTaGGAATCAGTTACACTATCC +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAISLRF*ESVTLS
Trigger: GGATAGTGTAACTGATTCCCAAAAGCGAAGGGAAAT...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTATGTATTGCTCCTCCCTaGGTAATGGCAATATACTGT +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLCIAPP*VMAIYC
Trigger: ACAGTATATTGCCATTACCCAGGGAGGAGCAATACA...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTCAACAACTTGGTTGCTaGGCACTAAGATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLQQLGC*ALRSAV
Trigger: GACAGCAGATCTTAGTGCCCAGCAACCAAGTTGTTG...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAATTATTACTGGTAATGTaGCCACATATGTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQLLLVM*PHMFLA
Trigger: AGCCAAGAACATATGTGGCCACATTACCAGTAATAA...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAAATACTCAGCATTCCTaGCTTAAGAGCTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIANTQHS*LKSSQS
Trigger: GCTCTGAGAGCTCTTAAGTCAGGAATGCTGAGTATT...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGCTTAATCCTGCAAAATaGAGCAGCCGTGATCTTCAA +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHALNPAK*SSRDLQ
Trigger: TTGAAGATCACGGCTGCTTCATTTTGCAGGATTAAG...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR TCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTCAGTGCCTGGTCAAATaGCAAGATGGGCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLQCLVK*QDGQSF
Trigger: AAAAGATTGCCCATCTTGTCATTTGACCAGGCACTG...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIANSASG*CANLVC
Trigger: ACATACCAGATTCGCACAGCACCCACTAGCACTATT...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCATCAACACTTCTTCATTaGACCTTACTTACTTTATGC +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSSTLLH*TLLTLC
Trigger: GCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGA...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCTCACATGAATGTGATTaGCTTGATTTATCAGGGACT +
Preference number: 4 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVASHECD*LDLSGT
Trigger: AGTCCCTGATAAATCAAGGCAATCACATTCATGTGA...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACCTACAGCCTTACTATaGACACTTTACTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLPTALL*TLYFLL
Trigger: AAGGAGAAAGTAAAGTGTGCATAGTAAGGCTGTAGG...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR GCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACACCTACAGCCTTACTATaGACACTTTACTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTPTALL*TLYFLL
Trigger: AAGGAGAAAGTAAAGTGTGCATAGTAAGGCTGTAGG...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGACAACATGTCAATTTaGCAATCAACACTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSDNMSI*QSTLLH
Trigger: ATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACAGTTACAACTGACATGTaGACAAATCAGTCAAGGACA +
Preference number: 4 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTVTTDM*TNQSRT
Trigger: TGTCCTTGACTGATTTGTCCACATGTCAGTTGTAAC...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAAGTCCAATAAAACATaGCTTCACACTACTAGCAAA +
Preference number: 4 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKKSNKT*LHTTSK
Trigger: TTTGCTAGTAGTGTGAAGCCATGTTTTATTGGACTT...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAAAGTTAAGTTTGTCTTaGGCCTGTGTTTTGCAACCT +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLKLSLS*ACVLQP
Trigger: AGGTTGCAAAACACAGGCCCAAGACAAACTTAACTT...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CAA 72 bp ACTCTCACTTCTCTGAGATGCTCCTCAGACAAAAGCTaGGAAATGCCATACTTCTATAGGCAAGTAATGTTA +
Preference number: 4 (lower is better)
Translates to: TLTSLRCSSDKS*EMPYFYRQVML
Trigger: TAACATTACTTGCCTATAGAAGTATGGCATTTCCAAGCTTTTGTCTGAGGAGCATCTCAGAGAAGTGAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
3UTR CAA 72 bp GTCCTGAAAATTAGGGATCCAGTAACTGAAGACATGTaGTTGTCTGAATTAGTTTTGCTGCCTTCCAACACA +
Preference number: 4 (lower is better)
Translates to: VLKIRDPVTEDM*LSELVLLPSNT
Trigger: TGTGTTGGAAGGCAGCAAAACTAATTCAGACAACAACATGTCTTCAGTTACTGGATCCCTAATTTTCAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
3UTR CAA 72 bp TTGGGGGAGAAGTTAAGTTTGTCTTGGGCCTGTGTTTaGCAACCTGAGTGTAAAAGACATATGTTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LGEKLSLSWACV*QPECKRHMLSL
Trigger: AAGACTTAACATATGTCTTTTACACTCAGGTTGCAAAACACAGGCCCAAGACAAACTTAACTTCTCCCCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACCTTACTTACTTTATaGATGCGGCCCACACATTAC +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLTLLTL*MRPTHY
Trigger: GTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTGCTAGTTTGGTAAATTaGAGTTGGCACCGTTACAGT +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLASLVN*SWHRYS
Trigger: ACTGTAACGGTGCCAACTCCAATTTACCAAACTAGC...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAAGTGGAGGCAGGTGTTaGAACATTCACAGTTTAATG +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIASGGRC*NIHSLM
Trigger: CATTAAACTGTGAATGTTCCAACACCTGCCTCCACT...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAGCAACAACTGCCCTATaGAAGAGCTGTATTAGTACA +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAATTAL*KSCIST
Trigger: TGTACTAATACAGCTCTTCCATAGGGCAGTTGTTGC...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CCA 90 bp TTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATCAAAGATGCATTAAATCTCCTGTaGGGAAACTGCATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LNLLWGNCMKENYSTIKDALNLL*GNCMKE
Trigger: TTCTTTCATGCAGTTTCCCCACAGGAGATTTAATGC...ATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR TCA 90 bp CCCAGAATATATAAGGAACTCAGAACCCAACAACAAAATTTCAATGAACAAAGGCTTATCATAAGCAGATaGGACAGATGGAACTTCAGC +
Preference number: 4 (lower is better)
Translates to: PRIYKELRTQQQNFNEQRLIISR*DRWNFS
Trigger: GCTGAAGTTCCATCTGTCTCATCTGCTTATGATAAG...CCTTTGTTCATTGAAATTTTGTTGTTGGGTTCTGAGTTCCTTATATATTCTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTAGACATGTTGTTGTCTaGATTAGTTTTGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLRHVVV*ISFAAF
Trigger: GAAGGCAGCAAAACTAATTCAGACAACAACATGTCT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTCTGCAATAGTTaGAATCTGTGTTCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLTFCNS*NLCSGE
Trigger: TTCTCCGGAACACAGATTTCAACTATTGCAGAAAGT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432329.6
CDS-3UTR GCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTATGAAATTCTGTAGTTaGTTTCAGGCAGTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLMKFCS*FQAVLR
Trigger: GCGCAAAACTGCCTGAAAGCAACTACAGAATTTCAT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCATACTTACTTTATGCATaGGGCCCACACATTACTTCA +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAYLLYA*GPHITS
Trigger: TGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTA...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR GCA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTCTGTGAGGACAATTaGTTTAAAAAGTCTTGTACT +
Preference number: 4 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLLCEDN*FKKSCT
Trigger: AGTACAAGACTTTTTAAAGCAATTGTCCTCACAGAG...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAGATAAAAGTGCCACATaGCCCTATATTTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIADKSAT*PYICKV
Trigger: CACTTTGCAAATATAGGGCCATGTGGCACTTTTATC...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGATCAATCATGAGTGCTaGAGTAATGCAGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHAINHEC*SNAVIE
Trigger: TTCTATGACTGCATTACTCCAGCACTCATGATTGAT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGACTGTATCTGTACAATaGCAGCAGTTTATAAACCAC +
Preference number: 4 (lower is better)
Translates to: VNLAINTSSLHLTYFMHATVSVQ*QQFINH
Trigger: GTGGTTTATAAACTGCTGCCATTGTACAGATACAGT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCATGTGCTTTGTACAACTaGGTGAACTATTTATCTCAC +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIACALYN*VNYLSH
Trigger: GTGAGATAAATAGTTCACTCAGTTGTACAAAGCACA...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTCCTCAGACAAAAGCTTaGAAATGCCATACTTCTATA +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLPQTKA*KCHTSI
Trigger: TATAGAAGTATGGCATTTCCAAGCTTTTGTCTGAGG...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp CCCAGAATATATAAGGAACTCAGAACCCAACAACAAAATTTCAATGAACAAAGGGTTACAACTGACATGTaGACAAATCAGTCAAGGACA +
Preference number: 4 (lower is better)
Translates to: PRIYKELRTQQQNFNEQRVTTDM*TNQSRT
Trigger: TGTCCTTGACTGATTTGTCCACATGTCAGTTGTAAC...CCTTTGTTCATTGAAATTTTGTTGTTGGGTTCTGAGTTCCTTATATATTCTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAGGTTGTACACCATTGTaGATGTACTACCACTTAATT +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAGCTPL*MYYHLI
Trigger: AATTAAGTGGTAGTACATCCACAATGGTGTACAACC...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CCA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCATACTTCTCAGTATCCTaGAGATACAACTTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAYFSVS*RYNLCR
Trigger: TCTACACAAGTTGTATCTCCAGGATACTGAGAAGTA...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR TCA 90 bp CCCAGAATATATAAGGAACTCAGAACCCAACAACAAAATTTCAATGAACAAAGGTCATCATTAAGCAACTaGCTTCAAAACCAGTGCAAT +
Preference number: 4 (lower is better)
Translates to: PRIYKELRTQQQNFNEQRSSLSN*LQNQCN
Trigger: ATTGCACTGGTTTTGAAGTCAGTTGCTTAATGATGA...CCTTTGTTCATTGAAATTTTGTTGTTGGGTTCTGAGTTCCTTATATATTCTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR GCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTAAAATCAATCATGAGTaGTGGAGTAATGCAGTCATA +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLKINHE*WSNAVI
Trigger: TATGACTGCATTACTCCAGCACTCATGATTGATTTT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CCA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTATGTTAAGTCTTCAGTaGCGAAACACTAAAACTAGA +
Preference number: 4 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLMLSLQ*RNTKTR
Trigger: TCTAGTTTTAGTGTTTCGCCACTGAAGACTTAACAT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS GCA 90 bp GAGGAGCCGCAGCCAGGGAGCCAGCCAGCGCCGCCCAGTGCCGAGTaGGCAGCGGCCGCGCACGGAAACAGCCGAGCTAGGCCCGGAGCA +
Preference number: 5 (lower is better)
Translates to: EEPQPGSQPAPPSAE*AAAAHGNSRARPGA
Trigger: TGCTCCGGGCCTAGCTCGGCTGTTTCCGTGCGCGGCCGCTGCGCACTCGGCACTGGGCGGCGCTGGCTGGCTCCCTGGCTGCGGCTCCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430624.5
CDS GCA 90 bp TGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: WGGCHNNSRGNSASG*CANLVCLYVSRGSL
Trigger: CAAGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
ENST00000448277.5
ENST00000455757.1
CDS GCA 90 bp TGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGCATC +
Preference number: 5 (lower is better)
Translates to: WGGCHNNSRGNSASG*CANLVCLYVSRGSI
Trigger: GATGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494983.1
CDS-3UTR CAA 90 bp GGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTGGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GCHNNSRGNSASGCCANLANLVC*YVSRGS
Trigger: GCTGCCTCTGGAGACGTACAAACATACCAGATTCGC...CAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CAA 90 bp TTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTCGCTGGGGACGGAACTaGCCGAAGACCTTCGGGTTT +
Preference number: 5 (lower is better)
Translates to: LLTLCMRPTHYFSSRGWGRWGRN*PKTFGF
Trigger: AAACCCGAAGGTCTTCGGCAAGTTCCGTCCCCAGCG...ACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430624.5
CDS-3UTR CAA 90 bp GAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTCTCTTCTTCAATCCTaGGCACTCCTGGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: EDAITTPGAIVLVGAVRISLLQS*ALLVHQ
Trigger: CTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAGA...GATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS GCA 90 bp ATTCCATGGTCATTTAGTTACCGGTGGTACAAGCTCCTCCGTCACTaGTTTCGTTCACGGCCCGGATCTCGCTGGAGTTTTATTCTCTCC +
Preference number: 5 (lower is better)
Translates to: IPWSFSYRWYKLLRH*FRSRPGSRWSFILS
Trigger: GGAGAGAATAAAACTCCAGCGAGATCCGGGCCGTGAACGAAAGCAGTGACGGAGGAGCTTGTACCACCGGTAACTAAATGACCATGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS GCA 90 bp TTGCAGGCCCTGTACCCCATCGGTACCATTGTTAGCCAGCTGTATTaGTCCTCCCTGGGTAATGGCAATATACTGTCCACTGCTAGTTTG +
Preference number: 5 (lower is better)
Translates to: LQALYPIGTIVSQLY*SSLGNGNILSTASL
Trigger: CAAACTAGCAGTGGACAGTATATTGCCATTACCCAGGGAGGAGCAATACAGCTGGCTAACAATGGTACCGATGGGGTACAGGGCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353267.8
ENST00000418081.5
ENST00000430624.5
ENST00000432329.6
ENST00000448277.5
CDS GCA 90 bp TGGGGAGGATGCCATAACAACTCCAGGGGCAATAGTGCTAGTGGGTaGTGTGCGAATCTGGTATGTTTGTACGTCTCCAGAGGCAGTATA +
Preference number: 5 (lower is better)
Translates to: WGGCHNNSRGNSASG*CANLVCLYVSRGSI
Trigger: TATACTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTATGGCATCCTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421139.5
CDS-3UTR CAA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTAATCTGTGGCTGGGCTaGAACTGTCATTTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSNLWLG*NCHLLV
Trigger: AACCAACAAATGACAGTTCAAGCCCAGCCACAGATT...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCAACCCCATCGGTACCATaGTTAGCCAGCTGTATTGCT +
Preference number: 5 (lower is better)
Translates to: SAQEAGVILSLRQSRSSATPSVP*LASCIA
Trigger: AGCAATACAGCTGGCTAACAATGGTACCGATGGGGT...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACATTCTCAAGGATGGTCTaGTCACTTCAGTGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTFSRMV*SLQCLV
Trigger: GACCAGGCACTGAAGTGACAAGACCATCCTTGAGAA...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp GACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTGCTGGGGAGGAAGACTGAACTGTTaGGACTTGTGGAGACTGAAT +
Preference number: 5 (lower is better)
Translates to: DLSLSCCFFSRLCRKCWGGRLNC*DLWRLN
Trigger: ATTCAGTCTCCACAAGTCCAAACAGTTCAGTCTTCC...TCCCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS CCA 90 bp AGCACAGAGTGGAGTAGTGGCAAAAGCAAAGAGAAACAGCACACATaGCAGAGTGGGATAACCAGCAGCTCAGCACCAATGGTGCACATA +
Preference number: 5 (lower is better)
Translates to: STEWSSGKSKEKQHT*QSGITSSSAPMVHI
Trigger: TATGTGCACCATTGGTGCTGAGCTGCTGGTTATCCCACTCTGCCATGTGTGCTGTTTCTCTTTGCTTTTGCCACTACTCCACTCTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480189.5
CDS-3UTR CAA 90 bp CGGACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTGCTGGGAATTTCCCTTCGCTTTaGGGAATCAGTTACACTATC +
Preference number: 5 (lower is better)
Translates to: RTSLFRAASSAGCVGSAGNFPSL*GISYTI
Trigger: GATAGTGTAACTGATTCCCAAAAGCGAAGGGAAATT...CCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CAA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTTCTCTTCTTCAATCCTaGGCACTCCTGGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLSLLQS*ALLVHQ
Trigger: CTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAGA...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACTGTCCACTGCTAGTTaGGTAAATTGGAGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: SAQEAGVILSLRQSRSSALSTAS*VNWSWH
Trigger: GTGCCAACTCCAATTTACCAAACTAGCAGTGGACAG...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp TTCATTAGACGGACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAACCCCATCGGTACCATaGTTAGCCAGCTGTATTGCT +
Preference number: 5 (lower is better)
Translates to: FIRRTSLFRAASSAGCVGTPSVP*LASCIA
Trigger: AGCAATACAGCTGGCTAACAATGGTACCGATGGGGT...TCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTCCGTCTAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CAA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGTCTCCAGAGGCAGCTaGAACAACAACTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAVSRGS*NNNLVA
Trigger: AGCAACCAAGTTGTTGTTCAAGCTGCCTCTGGAGAC...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAATTTTGTCTTTCAGGTaGTGGCCAAGCCAGTCCATT +
Preference number: 5 (lower is better)
Translates to: ACGPHITSAQEAGVILSLILSFR*WPSQSI
Trigger: AATGGACTGGCTTGGCCACAACCTGAAAGACAAAAT...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGGGCGTTGAAAATTTCTaGAGGGGAGAAGTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LYACGPHITSAQEAGVILGVENF*RGEVEA
Trigger: TGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGCC...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS TCA 90 bp TTGGTAAATTGGAGTTGGCACCGTTACAGTGGTGATGGCAGGTGCTaGAGTCTCCTCTTCAGACTTCTCTTCTTCAATCCTTGGCACTCC +
Preference number: 5 (lower is better)
Translates to: LVNWSWHRYSGDGRC*SLLFRLLFFNPWHS
Trigger: GGAGTGCCAAGGATTGAAGAAGAGAAGTCTGAAGAGGAGACTTCAGCACCTGCCATCACCACTGTAACGGTGCCAACTCCAATTTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000353267.8
ENST00000418081.5
ENST00000421139.5
ENST00000430624.5
ENST00000432329.6
ENST00000445803.5
ENST00000448277.5
ENST00000480189.5
CDS TCA 90 bp TTGGGCAGCTGTACTAGAGTTACGGTGGGAGCAGATGATGTTGCATaGGCTGCTGGCATAGATACAGGGAAGAGTCACAGAATTTCAAGC +
Preference number: 5 (lower is better)
Translates to: LGSCTRVTVGADDVA*AAGIDTGKSHRISS
Trigger: GCTTGAAATTCTGTGACTCTTCCCTGTATCTATGCCAGCAGCTCATGCAACATCATCTGCTCCCACCGTAACTCTAGTACAGCTGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000448277.5
ENST00000457101.5
ENST00000464407.1
ENST00000480189.5
CDS GCA 90 bp CTGGGCTTGAACTGTCATTTGTTGGTTTTCAGCTTCTGTTACAGCTaGATCTCCACTCTGCTGGTTCTCGGCTCCAGATTCCATGGTCAT +
Preference number: 5 (lower is better)
Translates to: LGLNCHLLVFSFCYS*ISTLLVLGSRFHGH
Trigger: ATGACCATGGAATCTGGAGCCGAGAACCAGCAGAGTGGAGATGCAGCTGTAACAGAAGCTGAAAACCAACAAATGACAGTTCAAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353267.8
ENST00000414681.1
ENST00000430624.5
ENST00000432329.6
ENST00000445803.5
ENST00000452474.5
ENST00000494094.5
CDS CCA 90 bp ATAACAACTCCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCAGAGGCAGTATACTGTCCACTGCTA +
Preference number: 5 (lower is better)
Translates to: ITTPGAIVLVGAVRI*YVCTSPEAVYCPLL
Trigger: TAGCAGTGGACAGTATACTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGGAGTTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421139.5
CDS CCA 90 bp TCATCTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTaGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAAC +
Preference number: 5 (lower is better)
Translates to: SSLCMRPTHYFSSRG*GNSVPKAIKELSTN
Trigger: GTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451164.1
CDS-3UTR CAA 90 bp TGTTCTTCATTAGACGGACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGCTGTCCACTGCTAGTTaGGTAAATTGGAGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: CSSLDGPLSFVLLLQQAVLSTAS*VNWSWH
Trigger: GTGCCAACTCCAATTTACCAAACTAGCAGTGGACAG...CACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTCCGTCTAATGAAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CAA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTCTGTCCACTGCTAGTTaGGTAAATTGGAGTTGGCAC +
Preference number: 5 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLLSTAS*VNWSWH
Trigger: GTGCCAACTCCAATTTACCAAACTAGCAGTGGACAG...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCAGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSANLVC*YVSRGS
Trigger: GCTGCCTCTGGAGACGTACAAACATACCAGATTCGC...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp ACCTGGCTAACTGGTTGGAGTGCAGACATAGGGAAGTTGTGCATTAAATCTCCTGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: TWLTGWSADIGKLCIKSPANLVC*YVSRGS
Trigger: GCTGCCTCTGGAGACGTACAAACATACCAGATTCGC...AGGAGATTTAATGCACAACTTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CAA 90 bp GCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAAGTGGAGGCAGGTGTaGGAACATTCACAGTTTAAT +
Preference number: 5 (lower is better)
Translates to: ACGPHITSAQEAGVILSLKWRQV*EHSQFN
Trigger: ATTAAACTGTGAATGTTCCAACACCTGCCTCCACTT...TAGGGACAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAAGCTGGTCTTGAACTCTaGACCACAGGTGATCCACCC +
Preference number: 5 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKAGLEL*TTGDPP
Trigger: GGGTGGATCACCTGTGGTCAAGAGTTCAAGACCAGC...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCACACAGAGTTTTAGAATaGCAAGGGGACCTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNAHRVLE*QGDLRR
Trigger: CCTTCTCAGGTCCCCTTGCAATTCTAAAACTCTGTG...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS TCA 90 bp GCTGGCATAGATACCTGGGCTAATGTGGCAATCTGTGGCTGGGCTTaGACTGTCATTTGTTGGTTTTCAGCTTCTGTTACAGCTGCATCT +
Preference number: 5 (lower is better)
Translates to: AGIDTWANVAICGWA*TVICWFSASVTAAS
Trigger: AGATGCAGCTGTAACAGAAGCTGAAAACCAACAAATGACAGTTCAAGCCCAGCCACAGATTGCCACATTAGCCCAGGTATCTATGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353267.8
ENST00000414681.1
ENST00000430624.5
ENST00000432329.6
ENST00000445803.5
ENST00000452474.5
ENST00000494094.5
CDS-3UTR CAA 90 bp ATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: IAPYLLYACGPHITSAQEANLVC*YVSRGS
Trigger: GCTGCCTCTGGAGACGTACAAACATACCAGATTCGC...CTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp CCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAGACAGGTCAGTATTTTCTATGACAATCCAAATATaGCAGTACAGCAGTCATTCA +
Preference number: 5 (lower is better)
Translates to: PSWDLHPPYQNADRSVFSMTIQI*QYSSHS
Trigger: TGAATGACTGCTGTACTGCAATATTTGGATTGTCAT...AGAAAATACTGACCTGTCTGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGTCTGAATTAGTTTaGCTGCCTTCCAACACAAGC +
Preference number: 5 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTLSELV*LPSNTS
Trigger: GCTTGTGTTGGAAGGCAGCAAAACTAATTCAGACAA...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCCAGCGGAAGGAAGATTaGGGGGAGAAGTTAAGTTTG +
Preference number: 5 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGQRKED*GEKLSL
Trigger: CAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTG...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp GACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTGCTGGGGACAATTTTTGAGTACCTaGAACAACAACTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: DLSLSCCFFSRLCRKCWGQFLST*NNNLVA
Trigger: AGCAACCAAGTTGTTGTTCAAGGTACTCAAAAATTG...TCCCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS-3UTR CAA 90 bp GACCTCTCTCTTTCGTGCTGCTTCTTCAGCAGGCTGTGTAGGAAGTGCTGGGGACCTGCTTTACAATTTTaGAGTACCTTGAACAACAAC +
Preference number: 5 (lower is better)
Translates to: DLSLSCCFFSRLCRKCWGPALQF*STLNNN
Trigger: GTTGTTGTTCAAGGTACTCAAAAATTGTAAAGCAGG...TCCCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGAAAGAGAGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS CCA 90 bp GCTGGCATAGATACAGGGAAGAGTCACAGAATTTCAAGCACAGAGTaGAGTAGTGGCAAAAGCAAAGAGAAACAGCACACATGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: AGIDTGKSHRISSTE*SSGKSKEKQHTWQS
Trigger: ACTCTGCCATGTGTGCTGTTTCTCTTTGCTTTTGCCACTACTCCACTCTGTGCTTGAAATTCTGTGACTCTTCCCTGTATCTATGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464407.1
ENST00000480189.5
CDS-3UTR CAA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGTCTCCAGAGGCAGCTaGAACAACAACTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSVSRGS*NNNLVA
Trigger: AGCAACCAAGTTGTTGTTCAAGCTGCCTCTGGAGAC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp CTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCTGGGGTAATTCTGAAGTGGAGGCAGGTGTaGGAACATTCACAGTTTAAT +
Preference number: 5 (lower is better)
Translates to: LYACGPHITSAQEAGVILKWRQV*EHSQFN
Trigger: ATTAAACTGTGAATGTTCCAACACCTGCCTCCACTT...CAGAATTACCCCAGCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp CTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAGGCGTTGAAAATTTCTaGAGGGGAGAAGTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LHCTLLTLCMRPTHYFSSGVENF*RGEVEA
Trigger: TGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGCC...TGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAACAAATTATTACTTCTaGAGGAGGGTGGGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNATNYYF*RRVGVE
Trigger: TTCAACCCCCACCCTCCTCAAGAAGTAATAATTTGT...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCAACAAACCAAATACTTTaGGGGGAGAGGCTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNATNQIL*GERLSS
Trigger: ACTTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGT...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp CAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTTCTTCCTAAGCCTTaGTATGATTCCACATGTCAC +
Preference number: 5 (lower is better)
Translates to: QEAGVILSLRQSRSSAQTFLPKP*YDSTCH
Trigger: GTGACATGTGGAATCATACAAAGGCTTAGGAAGAAA...GGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAGGGAATTTCTTAAGTaGCTAATACCCAAACTGGGT +
Preference number: 5 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTREFLK*LIPKLG
Trigger: ACCCAGTTTGGGTATTAGCAACTTAAGAAATTCCCT...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAGAAGCAGATTGGTGGTaGCCAGGGACAAGGGCGGTG +
Preference number: 5 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAEADWW*PGTRAV
Trigger: CACCGCCCTTGTCCCTGGCAACCACCAATCTGCTTC...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATCCTGGAGATACAACTaGTGTAGACCTAGTTACCAA +
Preference number: 5 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNASWRYN*CRPSYQ
Trigger: TTGGTAACTAGGTCTACACAAGTTGTATCTCCAGGA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTAATTTCCCTTCGCTTTaGGGAATCAGTTACACTATC +
Preference number: 5 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLNFPSL*GISYTI
Trigger: GATAGTGTAACTGATTCCCAAAAGCGAAGGGAAATT...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCACCCCATCGGTACCATaGTTAGCCAGCTGTATTGCT +
Preference number: 5 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVATPSVP*LASCIA
Trigger: AGCAATACAGCTGGCTAACAATGGTACCGATGGGGT...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTGAAGAAACATACAGGCGTTGAAAATTTCTaGAGGGGAGAAGTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: YNGRYSRLEHILAVKKHTGVENF*RGEVEA
Trigger: TGCCTCCACTTCTCCCCTCAAGAAATTTTCAACGCC...TGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCATTCAAATACCATGCTTaGTCGTTCAGTTGGTTACTT +
Preference number: 5 (lower is better)
Translates to: SAQEAGVILSLRQSRSSAFKYHA*SFSWLL
Trigger: AAGTAACCAACTGAACGACAAAGCATGGTATTTGAA...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp AGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAATGAATGTGATTGCCTaGATTTATCAGGGACTAAGA +
Preference number: 5 (lower is better)
Translates to: SSRGWGNSVPKAIKELSTMNVIA*IYQGLR
Trigger: TCTTAGTCCCTGATAAATCAAGGCAATCACATTCAT...TGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCATGGCCACATATGTTCTaGGCTACAAGGTTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: SAQEAGVILSLRQSRSSAWPHMF*ATRFLK
Trigger: TTTTAAAAACCTTGTAGCCAAGAACATATGTGGCCA...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TCAGCTCAAGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCAGTTTATAATATCAACTaGCATCACCGGCTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SAQEAGVILSLRQSRSSAVYNIN*HHRLCS
Trigger: AGAACAAAGCCGGTGATGCAAGTTGATATTATAAAC...TGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCTTGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp AAAATGTATCATGTCATACCCAGCTGGGACCTGCACCCACCGTACCAGAATGCATCCTCAGACAAAAGCTaGGAAATGCCATACTTCTAT +
Preference number: 5 (lower is better)
Translates to: KMYHVIPSWDLHPPYQNASSDKS*EMPYFY
Trigger: ATAGAAGTATGGCATTTCCAAGCTTTTGTCTGAGGA...TGCATTCTGGTACGGTGGGTGCAGGTCCCAGCTGGGTATGACATGATACATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAGGCCTGCTGAGGGAAAGTTaGACAGTTCCTCAAAAAGTT +
Preference number: 5 (lower is better)
Translates to: CTLLTLCMRPTHYFSSRGLLRES*TVPQKV
Trigger: AACTTTTTGAGGAACTGTCAAACTTTCCCTCAGCAG...GCCTCTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp GGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTGAAATCAGGCTTGAACTGTCATTaGTTGGTTTTCAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GVILSLRQSRSSAQTLKSGLNCH*LVFSFC
Trigger: ACAGAAGCTGAAAACCAACAAATGACAGTTCAAGCC...TGATTTCAAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAATCTGTGGCTGGGCTaGAACTGTCATTTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKNLWLG*NCHLLV
Trigger: AACCAACAAATGACAGTTCAAGCCCAGCCACAGATT...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAAATGACTCCATGGACTaGAACTGTCTGCCCATTGGG +
Preference number: 5 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLNDSMD*NCLPIG
Trigger: CCCAATGGGCAGACAGTTCAAGTCCATGGAGTCATT...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACATCTCTTCTTCAATCCTaGGCACTCCTGGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTSLLQS*ALLVHQ
Trigger: CTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAGA...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAAATCTTGAAGGCTTTCTaGGTGGTGGTATGTAAGTGC +
Preference number: 5 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQILKAF*VVVCKC
Trigger: GCACTTACATACCACCACCAAGAAAGCCTTCAAGAT...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp AGAGGCTGGGGTAATTCTGTCCCTAAGGCAATCAAGGAGCTCAGCACAAACCTTATGACAATCCAAATATaGCAGTACAGCAGTCATTCA +
Preference number: 5 (lower is better)
Translates to: RGWGNSVPKAIKELSTNLMTIQI*QYSSHS
Trigger: TGAATGACTGCTGTACTGCAATATTTGGATTGTCAT...AAGGTTTGTGCTGAGCTCCTTGATTGCCTTAGGGACAGAATTACCCCAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTGCTGGTCTTGAACTCTaGACCACAGGTGATCCACCC +
Preference number: 5 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLAGLEL*TTGDPP
Trigger: GGGTGGATCACCTGTGGTCAAGAGTTCAAGACCAGC...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp ACGAGATGGAAAAACCAGCGGAAGGAAGATTTGGGGGAGAAGTTAAGTTTGTCTGGCTTGAACTGTCATTaGTTGGTTTTCAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: TRWKNQRKEDLGEKLSLSGLNCH*LVFSFC
Trigger: ACAGAAGCTGAAAACCAACAAATGACAGTTCAAGCC...AGACAAACTTAACTTCTCCCCCAAATCTTCCTTCCGCTGGTTTTTCCATCTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGACCCCATCGGTACCATaGTTAGCCAGCTGTATTGCT +
Preference number: 5 (lower is better)
Translates to: VNLAINTSSLHLTYFMHATPSVP*LASCIA
Trigger: AGCAATACAGCTGGCTAACAATGGTACCGATGGGGT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp TTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATCAAAGATACCCCATCGGTACCATaGTTAGCCAGCTGTATTGCT +
Preference number: 5 (lower is better)
Translates to: LNLLWGNCMKENYSTIKDTPSVP*LASCIA
Trigger: AGCAATACAGCTGGCTAACAATGGTACCGATGGGGT...ATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CAA 90 bp TTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATCAAAGATGTCTCCAGAGGCAGCTaGAACAACAACTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LNLLWGNCMKENYSTIKDVSRGS*NNNLVA
Trigger: AGCAACCAAGTTGTTGTTCAAGCTGCCTCTGGAGAC...ATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CAA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAAGCTTTATTTGACATCTaGAAGGCTTTCTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKALFDI*KAFLVV
Trigger: CACCACCAAGAAAGCCTTCAAGATGTCAAATAAAGC...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TACAATGGCAGGTATAGCAGGCTTGAACACATCTTGGCAGTGAAGAAACATACATCTTGGGCCTGTGTTTaGCAACCTGAGTGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: YNGRYSRLEHILAVKKHTSWACV*QPECKR
Trigger: TCTTTTACACTCAGGTTGCAAAACACAGGCCCAAGA...TGTATGTTTCTTCACTGCCAAGATGTGTTCAAGCCTGCTATACCTGCCATTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp CTGCATGAAAGAAAACTACTCCACGATCAAAGATTGACCCATAATCATACAGCTAACCTGGCTAACTGGTaGGAGTGCAGACATAGGGAA +
Preference number: 5 (lower is better)
Translates to: LHERKLLHDQRLTHNHTANLANW*ECRHRE
Trigger: TTCCCTATGTCTGCACTCCAACCAGTTAGCCAGGTT...AGCTGTATGATTATGGGTCAATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CAA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAAATGACTCCATGGACTaGAACTGTCTGCCCATTGGG +
Preference number: 5 (lower is better)
Translates to: HNENVTTCQFGNQHFFIANDSMD*NCLPIG
Trigger: CCCAATGGGCAGACAGTTCAAGTCCATGGAGTCATT...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGAATTTCCCTTCGCTTTaGGGAATCAGTTACACTATC +
Preference number: 5 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKNFPSL*GISYTI
Trigger: GATAGTGTAACTGATTCCCAAAAGCGAAGGGAAATT...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCATCTCTTCTTCAATCCTaGGCACTCCTGGTGCATCAG +
Preference number: 5 (lower is better)
Translates to: HNENVTTCQFGNQHFFIASLLQS*ALLVHQ
Trigger: CTGATGCACCAGGAGTGCCAAGGATTGAAGAAGAGA...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTGTCTCCAGAGGCAGCTaGAACAACAACTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLVSRGS*NNNLVA
Trigger: AGCAACCAAGTTGTTGTTCAAGCTGCCTCTGGAGAC...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp CCCAGAATATATAAGGAACTCAGAACCCAACAACAAAATTTCAATGAACAAAGGGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PRIYKELRTQQQNFNEQRANLVC*YVSRGS
Trigger: GCTGCCTCTGGAGACGTACAAACATACCAGATTCGC...CCTTTGTTCATTGAAATTTTGTTGTTGGGTTCTGAGTTCCTTATATATTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACAATTTTGTCTTTCAGGTaGTGGCCAAGCCAGTCCATT +
Preference number: 5 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTILSFR*WPSQSI
Trigger: AATGGACTGGCTTGGCCACAACCTGAAAGACAAAAT...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAATTTCTTCCTAAGCCTTaGTATGATTCCACATGTCAC +
Preference number: 5 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKFLPKP*YDSTCH
Trigger: GTGACATGTGGAATCATACAAAGGCTTAGGAAGAAA...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGTCCTCAGACAAAAGCTaGGAAATGCCATACTTCTAT +
Preference number: 5 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKSSDKS*EMPYFY
Trigger: ATAGAAGTATGGCATTTCCAAGCTTTTGTCTGAGGA...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp ATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTAGGAAGACTGAACTGTTaGGACTTGTGGAGACTGAAT +
Preference number: 5 (lower is better)
Translates to: INTSSLHLTYFMHAAHTLGRLNC*DLWRLN
Trigger: ATTCAGTCTCCACAAGTCCAAACAGTTCAGTCTTCC...TAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432329.6
CDS-3UTR CAA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCAATTTCCCTTCGCTTTaGGGAATCAGTTACACTATC +
Preference number: 5 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVANFPSL*GISYTI
Trigger: GATAGTGTAACTGATTCCCAAAAGCGAAGGGAAATT...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACAAAGTGGAGGCAGGTGTaGGAACATTCACAGTTTAAT +
Preference number: 5 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTKWRQV*EHSQFN
Trigger: ATTAAACTGTGAATGTTCCAACACCTGCCTCCACTT...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp TGTTTATTTTGTCTTTCAGGTTGTGGCCAAGCCAGTCCATTTTCCACCTTAACAGCTTTATTTGACATCTaGAAGGCTTTCTTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CLFCLSGCGQASPFSTLTALFDI*KAFLVV
Trigger: CACCACCAAGAAAGCCTTCAAGATGTCAAATAAAGC...TGTTAAGGTGGAAAATGGACTGGCTTGGCCACAACCTGAAAGACAAAATAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp TCATTGCACCTTACTTACTTTATGCATGCGGCCCACACATTACTTCAGCTCAAGATGAATGTGATTGCCTaGATTTATCAGGGACTAAGA +
Preference number: 5 (lower is better)
Translates to: SLHLTYFMHAAHTLLQLKMNVIA*IYQGLR
Trigger: TCTTAGTCCCTGATAAATCAAGGCAATCACATTCAT...CTTGAGCTGAAGTAATGTGTGGGCCGCATGCATAAAGTAAGTAAGGTGCAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAATGGCCACATATGTTCTaGGCTACAAGGTTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKWPHMF*ATRFLK
Trigger: TTTTAAAAACCTTGTAGCCAAGAACATATGTGGCCA...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCAGGGAATTTCTTAAGTaGCTAATACCCAAACTGGGT +
Preference number: 5 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVAREFLK*LIPKLG
Trigger: ACCCAGTTTGGGTATTAGCAACTTAAGAAATTCCCT...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp GGGACTAAGAGGACCACCAACTTCCCAGTAAGTAGAAAGCCTGAACTTTTGAAAGTTTATAATATCAACTaGCATCACCGGCTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: GTKRTTNFPVSRKPELLKVYNIN*HHRLCS
Trigger: AGAACAAAGCCGGTGATGCAAGTTGATATTATAAAC...TTTCAAAAGTTCAGGCTTTCTACTTACTGGGAAGTTGGTGGTCCTCTTAGTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp AGCTGCCACAGACAAAGCATACAAACCAAATACTTTTGGGGGAGAGGCTTTCAATCTCCATTAGTCATCTaGACAGTAACATCTCCAAAT +
Preference number: 5 (lower is better)
Translates to: SCHRQSIQTKYFWGRGFQSPLVI*TVTSPN
Trigger: ATTTGGAGATGTTACTGTCAAGATGACTAATGGAGA...TTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGTATGCTTTGTCTGTGGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp GATTCTAGAATGTCAAGGAAACCAGTTCCTAGTACATACAGTGACTGTGTAGCCAGTGATGAGAATGTTTaGGAGCTAGATAGAAGTGGT +
Preference number: 5 (lower is better)
Translates to: DSRMSRKPVPSTYSDCVASDENV*ELDRSG
Trigger: ACCACTTCTATCTAGCTCCAAAACATTCTCATCACT...GGCTACACAGTCACTGTATGTACTAGGAACTGGTTTCCTTGACATTCTAGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353267.8
CDS-3UTR CAA 90 bp TTAAATCTCCTGTGGGGAAACTGCATGAAAGAAAACTACTCCACGATCAAAGATGCAGACATAGGGAAGTaGTGCATTAAATCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: LNLLWGNCMKENYSTIKDADIGK*CIKSPV
Trigger: CACAGGAGATTTAATGCACAACTTCCCTATGTCTGC...ATCTTTGATCGTGGAGTAGTTTTCTTTCATGCAGTTTCCCCACAGGAGATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS-3UTR CAA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAATTTTGTCTTTCAGGTaGTGGCCAAGCCAGTCCATT +
Preference number: 5 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAILSFR*WPSQSI
Trigger: AATGGACTGGCTTGGCCACAACCTGAAAGACAAAAT...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAATCTTGAAGGCTTTCTaGGTGGTGGTATGTAAGTGC +
Preference number: 5 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAILKAF*VVVCKC
Trigger: GCACTTACATACCACCACCAAGAAAGCCTTCAAGAT...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp GTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACTTTATGCATGCGACAAACCAAATACTTTaGGGGGAGAGGCTTTCAAGT +
Preference number: 5 (lower is better)
Translates to: VNLAINTSSLHLTYFMHATNQIL*GERLSS
Trigger: ACTTGAAAGCCTCTCCCCCAAAAGTATTTGGTTTGT...CGCATGCATAAAGTAAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000353267.8
ENST00000432329.6
CDS-3UTR CAA 90 bp CACAATGAGAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCAGGCTTGAACTGTCATTaGTTGGTTTTCAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: HNENVTTCQFGNQHFFIAGLNCH*LVFSFC
Trigger: ACAGAAGCTGAAAACCAACAAATGACAGTTCAAGCC...TGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTCTCATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS-3UTR CAA 90 bp GAATGTGACAACATGTCAATTTGGCAATCAACACTTCTTCATTGCACCTTACTTACAAATTATTACTTCTaGAGGAGGGTGGGGGTTGAA +
Preference number: 5 (lower is better)
Translates to: ECDNMSIWQSTLLHCTLLTNYYF*RRVGVE
Trigger: TTCAACCCCCACCCTCCTCAAGAAGTAATAATTTGT...AAGTAAGGTGCAATGAAGAAGTGTTGATTGCCAAATTGACATGTTGTCACATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
CDS GCA 90 bp CAGCAGAATGTGAAGACACACTTAACACATAACAATCTAAGTAAATaGAGTATTTGTACCTGTTCTTCATTAGACGGACCTCTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QQNVKTHLTHNNLSK*SICTCSSLDGPLSF
Trigger: GAAAGAGAGAGGTCCGTCTAATGAAGAACAGGTACAAATACTGCATTTACTTAGATTGTTATGTGTTAAGTGTGTCTTCACATTCTGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS TCA 90 bp TCAAGTAGACTCATCTTCAAACTGACGTTCAGAATTCAAATTCACTaGCATCCTGCTTTACAATTTTTGAGTACCTTGAACAACAACTTG +
Preference number: 5 (lower is better)
Translates to: SSRLIFKLTFRIQIH*HPALQFLSTLNNNL
Trigger: CAAGTTGTTGTTCAAGGTACTCAAAAATTGTAAAGCAGGATGTCAGTGAATTTGAATTCTGAACGTCAGTTTGAAGATGAGTCTACTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418081.5
CDS GCA 72 bp GGAGCCGCAGCCAGGGAGCCAGCCAGCGCCGCCCAGTaGCGAGTGCGCAGCGGCCGCGCACGGAAACAGCCG +
Preference number: 6 (lower is better)
Translates to: GAAAREPASAAQ*RVRSGRARKQP
Trigger: CGGCTGTTTCCGTGCGCGGCCGCTGCGCACTCGGCACTGGGCGGCGCTGGCTGGCTCCCTGGCTGCGGCTCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430624.5
CDS GCA 72 bp TGGCATAGATACCGGTGGTACAAGCTCCTCCGTCACTaGTTTCGTTCACGGCCCGGATCTCGCTGGAGTTTT +
Preference number: 6 (lower is better)
Translates to: WHRYRWYKLLRH*FRSRPGSRWSF
Trigger: AAAACTCCAGCGAGATCCGGGCCGTGAACGAAAGCAGTGACGGAGGAGCTTGTACCACCGGTATCTATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421139.5
CDS GCA 72 bp TCATTTAGTTACCGGTGGTACAAGCTCCTCCGTCACTaGTTTCGTTCACGGCCCGGATCTCGCTGGAGTTTT +
Preference number: 6 (lower is better)
Translates to: SFSYRWYKLLRH*FRSRPGSRWSF
Trigger: AAAACTCCAGCGAGATCCGGGCCGTGAACGAAAGCAGTGACGGAGGAGCTTGTACCACCGGTAACTAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353267.8
ENST00000432329.6
ENST00000494094.5
CDS CCA 72 bp CCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCAGAGGCAGCATCTTCA +
Preference number: 6 (lower is better)
Translates to: PGAIVLVGAVRI*YVCTSPEAASS
Trigger: TGAAGATGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494983.1
CDS TCA 72 bp TGTACTAGAGTTACGGTGGGAGCAGATGATGTTGCATaGGCTGCTGGCATAGATACCGGTGGTACAAGCTCC +
Preference number: 6 (lower is better)
Translates to: CTRVTVGADDVA*AAGIDTGGTSS
Trigger: GGAGCTTGTACCACCGGTATCTATGCCAGCAGCTCATGCAACATCATCTGCTCCCACCGTAACTCTAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421139.5
CDS CCA 72 bp CCAGGGGCAATAGTGCTAGTGGGTGCTGTGCGAATCTaGTATGTTTGTACGTCTCCAGAGGCAGTATACTGT +
Preference number: 6 (lower is better)
Translates to: PGAIVLVGAVRI*YVCTSPEAVYC
Trigger: ACAGTATACTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATTGCCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421139.5
CDS CAA 72 bp GTTAATGTTTGCAGGCCCTGTACCCCATCGGTACCATaGTTAGCCAGCTGTATTGCTCCTCCCTGGGTAATG +
Preference number: 6 (lower is better)
Translates to: VNVCRPCTPSVP*LASCIAPPWVM
Trigger: CATTACCCAGGGAGGAGCAATACAGCTGGCTAACAATGGTACCGATGGGGTACAGGGCCTGCAAACATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353267.8
ENST00000418081.5
ENST00000430624.5
ENST00000432329.6
ENST00000448277.5
CDS TCA 72 bp TGTACTAGAGTTACGGTGGGAGCAGATGATGTTGCATaGGCTGCTGGCATAGATACCTGGGCTAATGTGGCA +
Preference number: 6 (lower is better)
Translates to: CTRVTVGADDVA*AAGIDTWANVA
Trigger: TGCCACATTAGCCCAGGTATCTATGCCAGCAGCTCATGCAACATCATCTGCTCCCACCGTAACTCTAGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000353267.8
ENST00000414681.1
ENST00000430624.5
ENST00000432329.6
ENST00000445803.5
ENST00000452474.5
ENST00000494094.5
CDS TCA 72 bp TGGAGTTGGCACCGTTACAGTGGTGATGGCAGGTGCTaGAGTCTCCTCTTCAGACTTCTCTTCTTCAATCCT +
Preference number: 6 (lower is better)
Translates to: WSWHRYSGDGRC*SLLFRLLFFNP
Trigger: AGGATTGAAGAAGAGAAGTCTGAAGAGGAGACTTCAGCACCTGCCATCACCACTGTAACGGTGCCAACTCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000353267.8
ENST00000418081.5
ENST00000421139.5
ENST00000430624.5
ENST00000432329.6
ENST00000445803.5
ENST00000448277.5
ENST00000480189.5
CDS GCA 72 bp CTGTACCCCATCGGTACCATTGTTAGCCAGCTGTATTaGTCCTCCCTGGGTAATGGCAATATACTGTCCACT +
Preference number: 6 (lower is better)
Translates to: LYPIGTIVSQLY*SSLGNGNILST
Trigger: AGTGGACAGTATATTGCCATTACCCAGGGAGGAGCAATACAGCTGGCTAACAATGGTACCGATGGGGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000353267.8
ENST00000418081.5
ENST00000430624.5
ENST00000432329.6
ENST00000448277.5
CDS TCA 72 bp TGTACTAGAGTTACGGTGGGAGCAGATGATGTTGCATaGGCTGCTGGCATAGATACAGGGAAGAGTCACAGA +
Preference number: 6 (lower is better)
Translates to: CTRVTVGADDVA*AAGIDTGKSHR
Trigger: TCTGTGACTCTTCCCTGTATCTATGCCAGCAGCTCATGCAACATCATCTGCTCCCACCGTAACTCTAGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000448277.5
ENST00000457101.5
ENST00000464407.1
ENST00000480189.5
CDS CCA 72 bp CAGGTATGTATACTGTCCACTGCTAGTTTGGTAAATTaGAGTTGGCACCGTTACAGTGGTGATGGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: QVCILSTASLVN*SWHRYSGDGRC
Trigger: GCACCTGCCATCACCACTGTAACGGTGCCAACTCCAATTTACCAAACTAGCAGTGGACAGTATACATACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480189.5
CDS CAA 72 bp AATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGTATACTGTCCACTGCT +
Preference number: 6 (lower is better)
Translates to: NSASGCCANLVC*YVSRGSILSTA
Trigger: AGCAGTGGACAGTATACTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421139.5
CDS CAA 72 bp AATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGCATCTTCAAACTGACG +
Preference number: 6 (lower is better)
Translates to: NSASGCCANLVC*YVSRGSIFKLT
Trigger: CGTCAGTTTGAAGATGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494983.1
CDS GCA 72 bp AACTGTCATTTGTTGGTTTTCAGCTTCTGTTACAGCTaGATCTCCACTCTGCTGGTTCTCGGCTCCAGATTC +
Preference number: 6 (lower is better)
Translates to: NCHLLVFSFCYS*ISTLLVLGSRF
Trigger: GAATCTGGAGCCGAGAACCAGCAGAGTGGAGATGCAGCTGTAACAGAAGCTGAAAACCAACAAATGACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000353267.8
ENST00000414681.1
ENST00000430624.5
ENST00000432329.6
ENST00000445803.5
ENST00000452474.5
ENST00000494094.5
CDS CCA 72 bp CATCTCCACTCTGCTGGTTCTCGGCTCCAGATTCCATaGTCATTTAGTTACTTCACCAAAGGTGATCCCTTT +
Preference number: 6 (lower is better)
Translates to: HLHSAGSRLQIP*SFSYFTKGDPF
Trigger: AAAGGGATCACCTTTGGTGAAGTAACTAAATGACCATGGAATCTGGAGCCGAGAACCAGCAGAGTGGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452474.5
CDS CAA 72 bp AATAGTGCTAGTGGGTGCTGTGCGAATCTGGTATGTTaGTACGTCTCCAGAGGCAGCTTGAACAACAACTTG +
Preference number: 6 (lower is better)
Translates to: NSASGCCANLVC*YVSRGSLNNNL
Trigger: CAAGTTGTTGTTCAAGCTGCCTCTGGAGACGTACAAACATACCAGATTCGCACAGCACCCACTAGCACTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353267.8
ENST00000430624.5
ENST00000432329.6
ENST00000448277.5
ENST00000455757.1
CDS CAA 72 bp TACGTCTCCAGAGGCAGTATACTGTCCACTGCTAGTTaGGTAAATTGGAGTTGGCACCGTTACAGTGGTGAT +
Preference number: 6 (lower is better)
Translates to: YVSRGSILSTAS*VNWSWHRYSGD
Trigger: ATCACCACTGTAACGGTGCCAACTCCAATTTACCAAACTAGCAGTGGACAGTATACTGCCTCTGGAGACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421139.5
CDS CAA 72 bp TCCCTGGGTAATGGCAATATACTGTCCACTGCTAGTTaGGTAAATTGGAGTTGGCACCGTTACAGTGGTGAT +
Preference number: 6 (lower is better)
Translates to: SLGNGNILSTAS*VNWSWHRYSGD
Trigger: ATCACCACTGTAACGGTGCCAACTCCAATTTACCAAACTAGCAGTGGACAGTATATTGCCATTACCCAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000353267.8
ENST00000418081.5
ENST00000430624.5
ENST00000432329.6
ENST00000448277.5
CDS CAA 90 bp CTGACATCTCTTTATCTGCAACTACCTAAGACTTCCTCCACATCTTaGATTCTAACTATTAAATTCCATACCTGTAGGAAGGCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: LTSLYLQLPKTSSTS*ILTIKFHTCRKASL
Trigger: CAAGGAGGCCTTCCTACAGGTATGGAATTTAATAGTTAGAATCAAAGATGTGGAGGAAGTCTTAGGTAGTTGCAGATAAAGAGATGTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464407.1
ENST00000494094.5
CDS CAA 72 bp CTAACTATTAAATTCCATACCTGTAGGAAGGCCTCCTaGAAAGAATTTCCCTTCGCTTTTGGGAATCAGTTA +
Preference number: 6 (lower is better)
Translates to: LTIKFHTCRKAS*KEFPFAFGNQL
Trigger: TAACTGATTCCCAAAAGCGAAGGGAAATTCTTTCAAGGAGGCCTTCCTACAGGTATGGAATTTAATAGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464407.1
ENST00000494094.5
CDS CAA 90 bp TCTTTGATTCTAACTATTAAATTCCATACCTGTAGGAAGGCCTCCTaGAAAGAATTTCCCTTCGCTTTTGGGAATCAGTTACACTATCCA +
Preference number: 6 (lower is better)
Translates to: SLILTIKFHTCRKAS*KEFPFAFGNQLHYP
Trigger: TGGATAGTGTAACTGATTCCCAAAAGCGAAGGGAAATTCTTTCAAGGAGGCCTTCCTACAGGTATGGAATTTAATAGTTAGAATCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464407.1
ENST00000494094.5
CDS GCA 72 bp GTGAAGACACACTTAACACATAACAATCTAAGTAAATaGAGTATTTGTACCTGTTCTTCATTAGACGGACCT +
Preference number: 6 (lower is better)
Translates to: VKTHLTHNNLSK*SICTCSSLDGP
Trigger: AGGTCCGTCTAATGAAGAACAGGTACAAATACTGCATTTACTTAGATTGTTATGTGTTAAGTGTGTCTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455757.1
CDS CAA 72 bp CTTTATCTGCAACTACCTAAGACTTCCTCCACATCTTaGATTCTAACTATTAAATTCCATACCTGTAGGAAG +
Preference number: 6 (lower is better)
Translates to: LYLQLPKTSSTS*ILTIKFHTCRK
Trigger: CTTCCTACAGGTATGGAATTTAATAGTTAGAATCAAAGATGTGGAGGAAGTCTTAGGTAGTTGCAGATAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464407.1
ENST00000494094.5