Pregenerated sensors for CRCT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000169509Ensembl transcript IDs: ENST00000368790.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACATCTTCAAAAGACAATCAAATCAATAGACATTTGCTGAGCACCTaGTGTGTGCAAGCCCGTGTAGACAGTAGGGTCCAGTGTCCCACG | + |
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Preference number: 1 (lower is better) Translates to: TSSKDNQINRHLLST*CVQARVDSRVQCPT Trigger: CGTGGGACACTGGACCCTACTGTCTACACGGGCTTGCACACAGCAGGTGCTCAGCAAATGTCTATTGATTTGATTGTCTTTTGAAGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGAACATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCGGGGCGGGCCCGCTCTaGGCTGGGCGGGTTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: FLNIKVQFALRGKLRGPAGAGPL*AGRVSL Trigger: TAGAGAAACCCGCCCAGCCCAGAGCGGGCCCGCCCC...GGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGAACATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCGGGCCCGCTCTGGGCTaGGCGGGTTTCTCTAGCGCA | + |
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Preference number: 2 (lower is better) Translates to: FLNIKVQFALRGKLRGPAGPALG*AGFSSA Trigger: TGCGCTAGAGAAACCCGCCCAGCCCAGAGCGGGCCC...GGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGGGGTCAGGGAGTTTTaGGTGGCTGAGAACAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: QARVDSRVQCPTHGSRIPGVREF*VAENKV Trigger: CACTTTGTTCTCAGCCACGCAAAACTCCCTGACCCC...GGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCTGGCTGAGAACAAAGTaGGTTTCTGAACATCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: QARVDSRVQCPTHGSRIPWLRTK*VSEHQS Trigger: ACTTTGATGTTCAGAAACCCACTTTGTTCTCAGCCA...GGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| 3UTR CCA 72 bp | GCGTGGGAGCCGCAGCGGGGCGGGCCCGCTCTGGGCTaGGCGGGTTTCTCTAGCGCAGCGCTGGGGGTTGCG | + |
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Preference number: 3 (lower is better) Translates to: AWEPQRGGPALG*AGFSSAALGVA Trigger: CGCAACCCCCAGCGCTGCGCTAGAGAAACCCGCCCAGCCCAGAGCGGGCCCGCCCCGCTGCGGCTCCCACGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| 3UTR CCA 72 bp | TCGGGGTCAGGGAGTTTTGCGTGGCTGAGAACAAAGTaGGTTTCTGAACATCAAAGTGCAATTCGCTTTACG | + |
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Preference number: 3 (lower is better) Translates to: SGSGSFAWLRTK*VSEHQSAIRFT Trigger: CGTAAAGCGAATTGCACTTTGATGTTCAGAAACCCACTTTGTTCTCAGCCACGCAAAACTCCCTGACCCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| 3UTR TCA 72 bp | AGGGAGTTTTGCGTGGCTGAGAACAAAGTGGGTTTCTaGACATCAAAGTGCAATTCGCTTTACGGGGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: REFCVAENKVGF*TSKCNSLYGAN Trigger: GTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAACCCACTTTGTTCTCAGCCACGCAAAACTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR TCA 90 bp | TGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAGGAGCCGCAGCAGCCTaGGTCGCCGCAGCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: CNSLYGANSEAQPRVGAAGAAAA*VAAAAP Trigger: AGGGGCTGCTGCGGCGACTCAGGCTGCTGCGGCTCC...TGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR GCA 90 bp | GCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGGGGCTGGGACCTCTGGCTaGCGCCCCCGCAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ARVDSRVQCPTHGSRIPGAGTSG*RPRSSS Trigger: GCTGCTGCTGCGGGGGCGGCAGCCAGAGGTCCCAGC...CCCGGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR TCA 90 bp | TGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAGCCGGAGCAGCATCCTaGGCTCCGGTTGTTGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: CNSLYGANSEAQPRVGAAAGAAS*APVVGA Trigger: CGCTCCAACAACCGGAGCTCAGGATGCTGCTCCGGC...TGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR TCA 90 bp | CAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAGCGAAACGGCGCTCTGTTaGGAGGACATCGCGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QFALRGKLRGPAPRGSRSETALC*EDIAEL Trigger: GAGCTCCGCGATGTCCTCTCAACAGAGCGCCGTTTC...GCTGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | CAAGCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGGGGCGGGCCCGCTCTaGGCTGGGCGGGTTTCTCTA | + |
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Preference number: 4 (lower is better) Translates to: QARVDSRVQCPTHGSRIPGAGPL*AGRVSL Trigger: TAGAGAAACCCGCCCAGCCCAGAGCGGGCCCGCCCC...GGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | TGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAAGCAACTGGTGGAGCTaGAGCCGCAGCAGCCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: CNSLYGANSEAQPRVGAASNWWS*SRSSLS Trigger: ACTCAGGCTGCTGCGGCTCCAGCTCCACCAGTTGCT...TGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | GCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGGGGGAAGCAGCAGCAACTaGTGGAGCTGGAGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ARVDSRVQCPTHGSRIPGGSSSN*WSWSRS Trigger: GCTGCGGCTCCAGCTCCACCAGTTGCTGCTGCTTCC...CCCGGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | GCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGGGCTGAGCTCCGGTTGTTaGAGCGCTGGGACCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ARVDSRVQCPTHGSRIPGLSSGC*SAGTSG Trigger: GCCAGAGGTCCCAGCGCTCCAACAACCGGAGCTCAG...CCCGGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | GCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGGGTCGGCGGCGTCTCCTTaGGAAGCAGCAGCAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: ARVDSRVQCPTHGSRIPGSAASP*EAAATG Trigger: ACCAGTTGCTGCTGCTTCCCAAGGAGACGCCGCCGA...CCCGGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | CAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAGCCCTTGGAAAAGCCTTTaGCGGAAACGGCGCTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: QFALRGKLRGPAPRGSRSPWKSL*RKRRSV Trigger: AACAGAGCGCCGTTTCCGCCAAAGGCTTTTCCAAGG...GCTGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | ATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGCCAGTGTCCCACGCATaGCTCTCGAATCCCCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: IKVQFALRGKLRGPAPRGPVSHA*LSNPRG Trigger: TCCCCGGGGATTCGAGAGCCATGCGTGGGACACTGG...CCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR GCA 90 bp | TGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAGGGGTCAGGGAGTTTTaGGTGGCTGAGAACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: CNSLYGANSEAQPRVGAAGVREF*VAENKV Trigger: CACTTTGTTCTCAGCCACGCAAAACTCCCTGACCCC...TGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | GCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGGGCCTGGGACGACCCCTTaGAAAAGCCTTTGGCGGAAA | + |
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Preference number: 4 (lower is better) Translates to: ARVDSRVQCPTHGSRIPGPGTTP*KSLWRK Trigger: TTTCCGCCAAAGGCTTTTCCAAGGGGTCGTCCCAGG...CCCGGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | TTTCTGAACATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCGAGCGCTGGGACCTCTaGCTGCCGCCCCCGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FLNIKVQFALRGKLRGPAERWDL*LPPPQQ Trigger: CTGCTGCGGGGGCGGCAGCCAGAGGTCCCAGCGCTC...GGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR TCA 90 bp | GCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGGGAGACCCTGGCTCCACTaGAAGACTCACTACGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ARVDSRVQCPTHGSRIPGRPWLH*KTHYVL Trigger: GAGAACGTAGTGAGTCTTTCAGTGGAGCCAGGGTCT...CCCGGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | TTTCTGAACATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCGGTTGTTGGAGCGCTaGGACCTCTGGCTGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: FLNIKVQFALRGKLRGPARLLER*DLWLPP Trigger: GGGCGGCAGCCAGAGGTCCCAGCGCTCCAACAACCG...GGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | TGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCATCAGGGAGTTTTGCGTaGCTGAGAACAAAGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: CNSLYGANSEAQPRVGAASGSFA*LRTKWV Trigger: AACCCACTTTGTTCTCAGCCACGCAAAACTCCCTGA...TGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | CAAGCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCACTACGTTCTCCAACTaGAATGGGCCACCTGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: QARVDSRVQCPTHGSRIPTTFSN*NGPPAR Trigger: CCTAGCAGGTGGCCCATTCCAGTTGGAGAACGTAGT...GGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | TTTCTGAACATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCTCTCTAGCGCAGCGCTaGGGGTTGCGGGCCTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FLNIKVQFALRGKLRGPASLAQR*GLRASQ Trigger: CTGAGAGGCCCGCAACCCCCAGCGCTGCGCTAGAGA...GGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR TCA 90 bp | ATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGGGAGTTTTGCGTGGCTaGGAACAAAGTGGGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: IKVQFALRGKLRGPAPRGGVLRG*EQSGFL Trigger: CAGAAACCCACTTTGTTCTCAGCCACGCAAAACTCC...CCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR TCA 90 bp | CAAGCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCTCAATAGACATTTGCTaGGCACCTGCTGTGTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: QARVDSRVQCPTHGSRIPSIDIC*APAVCK Trigger: CTTGCACACAGCAGGTGCTCAGCAAATGTCTATTGA...GGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CCA 90 bp | TGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCATGGCTGAGAACAAAGTaGGTTTCTGAACATCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: CNSLYGANSEAQPRVGAAWLRTK*VSEHQS Trigger: ACTTTGATGTTCAGAAACCCACTTTGTTCTCAGCCA...TGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR GCA 90 bp | TTTCTGAACATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCATTTGCTGAGCACCTaGTGTGTGCAAGCCCGTGTA | + |
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Preference number: 4 (lower is better) Translates to: FLNIKVQFALRGKLRGPAHLLST*CVQARV Trigger: TACACGGGCTTGCACACAGCAGGTGCTCAGCAAATG...GGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR TCA 90 bp | TTTCTGAACATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCAACAAAGTGGGTTTCTaGACATCAAAGTGCAATTCG | + |
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Preference number: 4 (lower is better) Translates to: FLNIKVQFALRGKLRGPANKVGF*TSKCNS Trigger: CGAATTGCACTTTGATGTTCAGAAACCCACTTTGTT...GGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS CCA 90 bp | GGGGCGGGCCCGCTCTGGGCTGGGCGGGTTTCTCTAGCGCAGCGCTaGGGGTTGCGGGCCTCTCAGCAGCCGGAGCAGCATCCTGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GAGPLWAGRVSLAQR*GLRASQQPEQHPEL Trigger: GAGCTCAGGATGCTGCTCCGGCTGCTGAGAGGCCCGCAACCCCCAGCGCTGCGCTAGAGAAACCCGCCCAGCCCAGAGCGGGCCCGCCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CAA 90 bp | CAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAGCGTCGGCGGCGTCTCCTaGGGAAGCAGCAGCAACTGG | + |
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Preference number: 5 (lower is better) Translates to: QFALRGKLRGPAPRGSRSVGGVS*GSSSNW Trigger: CCAGTTGCTGCTGCTTCCCAAGGAGACGCCGCCGAC...GCTGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CAA 90 bp | CAAGCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCGCGCAGCGCTGGGGGTaGCGGGCCTCTCAGCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: QARVDSRVQCPTHGSRIPAQRWG*RASQQP Trigger: CGGCTGCTGAGAGGCCCGCAACCCCCAGCGCTGCGC...GGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CAA 90 bp | CAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAGCGGAAACGGCGCTCTGTaGAGAGGACATCGCGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: QFALRGKLRGPAPRGSRSGNGAL*RGHRGA Trigger: AGCTCCGCGATGTCCTCTCAACAGAGCGCCGTTTCC...GCTGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CAA 90 bp | TGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCACATCCTGAGCTCCGGTaGTTGGAGCGCTGGGACCTC | + |
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Preference number: 5 (lower is better) Translates to: CNSLYGANSEAQPRVGAAHPELR*LERWDL Trigger: GAGGTCCCAGCGCTCCAACAACCGGAGCTCAGGATG...TGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CAA 90 bp | CAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCAGCCCCTTGGAAAAGCCTTaGGCGGAAACGGCGCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: QFALRGKLRGPAPRGSRSPLEKP*AETALC Trigger: ACAGAGCGCCGTTTCCGCCAAAGGCTTTTCCAAGGG...GCTGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CAA 90 bp | TGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCGCGTGGGAGCCGCACCCTGGGACGACCCCTaGGAAAAGCCTTTGGCGGAA | + |
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Preference number: 5 (lower is better) Translates to: CNSLYGANSEAQPRVGAAPWDDP*EKPLAE Trigger: TTCCGCCAAAGGCTTTTCCAAGGGGTCGTCCCAGGG...TGCGGCTCCCACGCGGGGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS TCA 90 bp | TGGGACGACCCCTTGGAAAAGCCTTTGGCGGAAACGGCGCTCTGTTaGGAGGACATCGCGGAGCTCCTCACGACAAACCAGACCCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: WDDPLEKPLAETALC*EDIAELLTTNQTLA Trigger: AGCCAGGGTCTGGTTTGTCGTGAGGAGCTCCGCGATGTCCTCTCAACAGAGCGCCGTTTCCGCCAAAGGCTTTTCCAAGGGGTCGTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CAA 90 bp | TTTCTGAACATCAAAGTGCAATTCGCTTTACGGGGCAAACTCCGAGGCCCAGCCCCTGAGCTCCGGTTGTaGGAGCGCTGGGACCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FLNIKVQFALRGKLRGPAPELRL*ERWDLW Trigger: CCAGAGGTCCCAGCGCTCCAACAACCGGAGCTCAGG...GGCTGGGCCTCGGAGTTTGCCCCGTAAAGCGAATTGCACTTTGATGTTCAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS-3UTR CAA 90 bp | CAAGCCCGTGTAGACAGTAGGGTCCAGTGTCCCACGCATGGCTCTCGAATCCCCCAAATCAATAGACATTaGCTGAGCACCTGCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: QARVDSRVQCPTHGSRIPQINRH*LSTCCV Trigger: CACACAGCAGGTGCTCAGCAAATGTCTATTGATTTG...GGGGATTCGAGAGCCATGCGTGGGACACTGGACCCTACTGTCTACACGGGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS CAA 90 bp | GGCCCGCTCTGGGCTGGGCGGGTTTCTCTAGCGCAGCGCTGGGGGTaGCGGGCCTCTCAGCAGCCGGAGCAGCATCCTGAGCTCCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: GPLWAGRVSLAQRWG*RASQQPEQHPELRL Trigger: CAACCGGAGCTCAGGATGCTGCTCCGGCTGCTGAGAGGCCCGCAACCCCCAGCGCTGCGCTAGAGAAACCCGCCCAGCCCAGAGCGGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS CCA 72 bp | CTCAGCAGCCGGAGCAGCATCCTGAGCTCCGGTTGTTaGAGCGCTGGGACCTCTGGCTGCCGCCCCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSSRSSILSSGC*SAGTSGCRPRS Trigger: GCTGCGGGGGCGGCAGCCAGAGGTCCCAGCGCTCCAACAACCGGAGCTCAGGATGCTGCTCCGGCTGCTGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS CCA 72 bp | CCGCTCTGGGCTGGGCGGGTTTCTCTAGCGCAGCGCTaGGGGTTGCGGGCCTCTCAGCAGCCGGAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: PLWAGRVSLAQR*GLRASQQPEQH Trigger: ATGCTGCTCCGGCTGCTGAGAGGCCCGCAACCCCCAGCGCTGCGCTAGAGAAACCCGCCCAGCCCAGAGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS CAA 72 bp | TGGGCTGGGCGGGTTTCTCTAGCGCAGCGCTGGGGGTaGCGGGCCTCTCAGCAGCCGGAGCAGCATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: WAGRVSLAQRWG*RASQQPEQHPE Trigger: CTCAGGATGCTGCTCCGGCTGCTGAGAGGCCCGCAACCCCCAGCGCTGCGCTAGAGAAACCCGCCCAGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS TCA 72 bp | GGGGTTGCGGGCCTCTCAGCAGCCGGAGCAGCATCCTaGGCTCCGGTTGTTGGAGCGCTGGGACCTCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GVAGLSAAGAAS*APVVGALGPLA Trigger: AGCCAGAGGTCCCAGCGCTCCAACAACCGGAGCTCAGGATGCTGCTCCGGCTGCTGAGAGGCCCGCAACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS CAA 90 bp | CTGGGACGACCCCTTGGAAAAGCCTTTGGCGGAAACGGCGCTCTGTaGAGAGGACATCGCGGAGCTCCTCACGACAAACCAGACCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LGRPLGKAFGGNGAL*RGHRGAPHDKPDPG Trigger: GCCAGGGTCTGGTTTGTCGTGAGGAGCTCCGCGATGTCCTCTCAACAGAGCGCCGTTTCCGCCAAAGGCTTTTCCAAGGGGTCGTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS TCA 72 bp | CCCTTGGAAAAGCCTTTGGCGGAAACGGCGCTCTGTTaGGAGGACATCGCGGAGCTCCTCACGACAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: PLEKPLAETALC*EDIAELLTTNQ Trigger: CTGGTTTGTCGTGAGGAGCTCCGCGATGTCCTCTCAACAGAGCGCCGTTTCCGCCAAAGGCTTTTCCAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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| CDS CAA 72 bp | CCCCTTGGAAAAGCCTTTGGCGGAAACGGCGCTCTGTaGAGAGGACATCGCGGAGCTCCTCACGACAAACCA | + |
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Preference number: 6 (lower is better) Translates to: PLGKAFGGNGAL*RGHRGAPHDKP Trigger: TGGTTTGTCGTGAGGAGCTCCGCGATGTCCTCTCAACAGAGCGCCGTTTCCGCCAAAGGCTTTTCCAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368790.4 |
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