RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRBN (Homo sapiens)

Ensembl gene IDs: ENSG00000113851

Ensembl transcript IDs: ENST00000231948.9, ENST00000424814.5, ENST00000432408.6, ENST00000450014.1, ENST00000459840.5, ENST00000478353.1, ENST00000480249.5, ENST00000482844.5, ENST00000488263.5, ENST00000491834.5, ENST00000492178.1, ENST00000498442.1, ENST00000498700.5, ENST00000639284.1

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACACAGATGTTTGAATGCTTACCACAGGTCAATCCCTGTGTTAGGTaGATTAAACGTGGTAATGAACGAGTGAAAGTGTTCGCCTTCATA +
Preference number: 1 (lower is better)
Translates to: TQMFECLPQVNPCVR*IKRGNERVKVFAFI
Trigger: TATGAAGGCGAACACTTTCACTCGTTCATTACCACGTTTAATGCACCTAACACAGGGATTGACCTGTGGTAAGCATTCAAACATCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
3UTR TCA 90 bp GGAAATAATCTCATCATTTCCAAAGATGTCTTCATGTCCCATCAATaGCATGCTACCAGACATATCAGATTCCACAGGATAATGGCACCA +
Preference number: 1 (lower is better)
Translates to: GNNLIISKDVFMSHQ*HATRHIRFHRIMAP
Trigger: TGGTGCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATGATGAGATTATTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR GCA 90 bp ATTGATATTTCCTCCATTGATTTATTAATTACACAGATGTTTGAATaGTTACCACAGGTCAATCCCTGTGTTAGGTGCATTAAACGTGGT +
Preference number: 1 (lower is better)
Translates to: IDISSIDLLITQMFE*LPQVNPCVRCIKRG
Trigger: ACCACGTTTAATGCACCTAACACAGGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGAGGAAATATCAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
3UTR-3UTR TCA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGGTGGTAATGAACGAGTaGAAGTGTTCGCCTTCATAC +
Preference number: 2 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQVVMNE*KCSPSY
Trigger: GTATGAAGGCGAACACTTTCACTCGTTCATTACCAC...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
3UTR-3UTR CCA 90 bp TCCATTGATTTATTAATTACACAGATGTTTGAATGCTTACCACAGGTCAATCCCGTAATCCCCGCACTTTaGGAGGCCGAGGCGGGTGGA +
Preference number: 2 (lower is better)
Translates to: SIDLLITQMFECLPQVNPVIPAL*EAEAGG
Trigger: TCCACCCGCCTCGGCCTCCCAAAGTGCGGGGATTAC...GGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
3UTR-3UTR TCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCTTCATGTCCCATCAATaGCATGCTACCAGACATATC +
Preference number: 2 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIFMSHQ*HATRHI
Trigger: GATATGTCTGGTAGCATGTCATTGATGGGACATGAA...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR-3UTR GCA 90 bp TCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCAAATCCCTGTGTTAGGTaGATTAAACGTGGTAATGAA +
Preference number: 2 (lower is better)
Translates to: SVYKMVTSQMSVSSGDLANPCVR*IKRGNE
Trigger: TTCATTACCACGTTTAATGCACCTAACACAGGGATT...TGCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
3UTR-3UTR CCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCCCAAGTAGATGTTTCTaGTATTCTAGACTGCCGTTC +
Preference number: 2 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIPSRCF*YSRLPF
Trigger: GAACGGCAGTCTAGAATACCAGAAACATCTACTTGG...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR-3UTR GCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCCTAGACTGCCGTTCATaGTTGTTTCCTAAAGTATAC +
Preference number: 2 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRILDCRS*LFPKVY
Trigger: GTATACTTTAGGAAACAAGCATGAACGGCAGTCTAG...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR-3UTR GCA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATTCTGGTATTCTAGACTaGCGTTCATGCTTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNSGILD*RSCLFP
Trigger: AGGAAACAAGCATGAACGGCAGTCTAGAATACCAGA...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR-3UTR GCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCGTTTCACTTAGAAACTaGAACCCTCCAAGTAATGTT +
Preference number: 2 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIVSLRN*NPPSNV
Trigger: AACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAAC...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR-3UTR GCA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGTTTCACTTAGAAACTaGAACCCTCCAAGTAATGTT +
Preference number: 2 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNVSLRN*NPPSNV
Trigger: AACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAAC...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR-3UTR CAA 90 bp TCCATTGATTTATTAATTACACAGATGTTTGAATGCTTACCACAGGTCAATCCCAGACATAATCGAAACTaGGATGGGCCGGGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: SIDLLITQMFECLPQVNPRHNRN*DGPGVV
Trigger: CACCACACCCGGCCCATCCAAGTTTCGATTATGTCT...GGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
3UTR GCA 72 bp CATTTCCAAAGATGTCTTCATGTCCCATCAATGACATaGTACCAGACATATCAGATTCCACAGGATAATGGC +
Preference number: 3 (lower is better)
Translates to: HFQRCLHVPSMT*YQTYQIPQDNG
Trigger: GCCATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR GCA 72 bp TTTGAATGCTTACCACAGGTCAATCCCTGTGTTAGGTaGATTAAACGTGGTAATGAACGAGTGAAAGTGTTC +
Preference number: 3 (lower is better)
Translates to: FECLPQVNPCVR*IKRGNERVKVF
Trigger: GAACACTTTCACTCGTTCATTACCACGTTTAATGCACCTAACACAGGGATTGACCTGTGGTAAGCATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
3UTR TCA 72 bp CTCATCATTTCCAAAGATGTCTTCATGTCCCATCAATaGCATGCTACCAGACATATCAGATTCCACAGGATA +
Preference number: 3 (lower is better)
Translates to: LIISKDVFMSHQ*HATRHIRFHRI
Trigger: TATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTGGAAATGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR GCA 72 bp CAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTaGCGTTCATGCTTGTTTCCTAAAGTATACTTAAAA +
Preference number: 3 (lower is better)
Translates to: QATQVDVSGILD*RSCLFPKVYLK
Trigger: TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
3UTR GCA 72 bp TCCTCCATTGATTTATTAATTACACAGATGTTTGAATaGTTACCACAGGTCAATCCCTGTGTTAGGTGCATT +
Preference number: 3 (lower is better)
Translates to: SSIDLLITQMFE*LPQVNPCVRCI
Trigger: AATGCACCTAACACAGGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
3UTR CCA 72 bp ATCAAATGTAGCTGGAATATTGCCATACAAGGTGGCTaGGTAATGAATCATGAAAGTTGTGTTTCTTTCTTA +
Preference number: 3 (lower is better)
Translates to: IKCSWNIAIQGG*VMNHESCVSFL
Trigger: TAAGAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCTACATTTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR TCA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGAGCTACTCGGGAGGCTaGGGCAGGAGGATGGCGGGA +
Preference number: 4 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQSYSGG*GRRMAG
Trigger: TCCCGCCATCCTCCTGCCTCAGCCTCCCGAGTAGCT...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp TCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCATGCGCAGCGTCCTGCTaGTCTCCTTCGCCGGCCATG +
Preference number: 4 (lower is better)
Translates to: SVYKMVTSQMSVSSGDLACAASC*SPSPAM
Trigger: CATGGCCGGCGAAGGAGATCAGCAGGACGCTGCGCA...TGCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCTGCGCAGCGTCCTGCTaGTCTCCTTCGCCGGCCATG +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRICAASC*SPSPAM
Trigger: CATGGCCGGCGAAGGAGATCAGCAGGACGCTGCGCA...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231948.9
ENST00000432408.6
CDS-3UTR GCA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTGGAGCGGCAGGTGGTTaGCCATGTTGTGCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCGAAGG*PCCAQR
Trigger: ACGCTGCGCACAACATGGGCAACCACCTGCCGCTCC...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp GAACGAGTGAAAGTGTTCGCCTTCATACAGCTTACGGTTTTAGGTAGTCATGGACCAGGCATGGCGGTGTaGGCCTGTAGTCCGAGCTAC +
Preference number: 4 (lower is better)
Translates to: ERVKVFAFIQLTVLGSHGPGMAV*ACSPSY
Trigger: GTAGCTCGGACTACAGGCGCACACCGCCATGCCTGG...TCCATGACTACCTAAAACCGTAAGCTGTATGAAGGCGAACACTTTCACTCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATTGCGCAGCGTCCTGCTaGTCTCCTTCGCCGGCCATG +
Preference number: 4 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNCAASC*SPSPAM
Trigger: CATGGCCGGCGAAGGAGATCAGCAGGACGCTGCGCA...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231948.9
ENST00000432408.6
CDS-3UTR CCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCGGCAGGAGCGGCAGGTaGTTGCCCATGTTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIGRSGR*LPMLCA
Trigger: TGCGCACAACATGGGCAACCACCTGCCGCTCCTGCC...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp GTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCAGAACTGGAATCACCTaGCAGCTGTCGTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: VSVQNGDIPNVCLQWRPSRTGIT*QLSSSC
Trigger: GCACGATGACGACAGCTGTCAGGTGATTCCAGTTCT...GCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp AGCTGGAATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTGGAGCGGCAGGTGGTTaGCCATGTTGTGCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: SWNIAIQGGWVMNHESCVGAAGG*PCCAQR
Trigger: ACGCTGCGCACAACATGGGCAACCACCTGCCGCTCC...AACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CCA 90 bp TGTGTTAGGTGCATTAAACGTGGTAATGAACGAGTGAAAGTGTTCGCCTTCATAGGCAGGAGCGGCAGGTaGTTGCCCATGTTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: CVRCIKRGNERVKVFAFIGRSGR*LPMLCA
Trigger: TGCGCACAACATGGGCAACCACCTGCCGCTCCTGCC...TATGAAGGCGAACACTTTCACTCGTTCATTACCACGTTTAATGCACCTAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp GAACGAGTGAAAGTGTTCGCCTTCATACAGCTTACGGTTTTAGGTAGTCATGGACAGTGTCTGGGATCGTaGGCAACAGAGCAGATCGCG +
Preference number: 4 (lower is better)
Translates to: ERVKVFAFIQLTVLGSHGQCLGS*ATEQIA
Trigger: CGCGATCTGCTCTGTTGCCCACGATCCCAGACACTG...TCCATGACTACCTAAAACCGTAAGCTGTATGAAGGCGAACACTTTCACTCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGGCACAGATCTTACACTaGGCAACAGTCCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQAQILH*ATVQAY
Trigger: GTATGCCTGGACTGTTGCCCAGTGTAAGATCTGTGC...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp TCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCAAACTGCAGACATGGTTaGAGGCAACACACATTCGGG +
Preference number: 4 (lower is better)
Translates to: SVYKMVTSQMSVSSGDLANCRHG*RQHTFG
Trigger: CCCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTT...TGCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp GTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCCCATCCAATATGGCTTaGACAGATCTTACACTGGGC +
Preference number: 4 (lower is better)
Translates to: VSVQNGDIPNVCLQWRPSPSNMA*TDLTLG
Trigger: GCCCAGTGTAAGATCTGTGCAAGCCATATTGGATGG...GCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp ATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCTTAGGCAGGAGCGGCAGGTaGTTGCCCATGTTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: IAIQGGWVMNHESCVSFLGRSGR*LPMLCA
Trigger: TGCGCACAACATGGGCAACCACCTGCCGCTCCTGCC...TAAGAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CCA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGGCACAGATCTTACACTaGGCAACAGTCCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMAQILH*ATVQAY
Trigger: GTATGCCTGGACTGTTGCCCAGTGTAAGATCTGTGC...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGTTCATCTTCAGTGTCTaGGATCGTGGGCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMFIFSV*DRGQQS
Trigger: GCTCTGTTGCCCACGATCCCAGACACTGAAGATGAA...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAGGAGCGGCAGGTGGTTaGCCATGTTGTGCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKGAAGG*PCCAQR
Trigger: ACGCTGCGCACAACATGGGCAACCACCTGCCGCTCC...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATGGAGCGGCAGGTGGTTaGCCATGTTGTGCGCAGCGT +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYGAAGG*PCCAQR
Trigger: ACGCTGCGCACAACATGGGCAACCACCTGCCGCTCC...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATGGCAGGAGCGGCAGGTaGTTGCCCATGTTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYGRSGR*LPMLCA
Trigger: TGCGCACAACATGGGCAACCACCTGCCGCTCCTGCC...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAGGCAGGAGCGGCAGGTaGTTGCCCATGTTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKGRSGR*LPMLCA
Trigger: TGCGCACAACATGGGCAACCACCTGCCGCTCCTGCC...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTTTCATCTTCAGTGTCTaGGATCGTGGGCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCFIFSV*DRGQQS
Trigger: GCTCTGTTGCCCACGATCCCAGACACTGAAGATGAA...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAAGAACTGGAATCACCTaGCAGCTGTCGTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPRTGIT*QLSSSC
Trigger: GCACGATGACGACAGCTGTCAGGTGATTCCAGTTCT...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGAATTCCGCACCATACTaGCTTCTTGAGGGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQNSAPY*LLEGEK
Trigger: TTTTTCACCCTCAAGAAGTCAGTATGGTGCGGAATT...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCAACTGCAGACATGGTTaGAGGCAACACACATTCGGG +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRINCRHG*RQHTFG
Trigger: CCCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTT...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp GTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCCACGTAGCTGTTTCTTaGTTCTGTCCATTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VSVQNGDIPNVCLQWRPSHVAVS*FCPLRS
Trigger: AGACCTTAATGGACAGAATCAAGAAACAGCTACGTG...GCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCACTTGTGGAAGAACTaGAATCACCTGACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCHLWKN*NHLTAV
Trigger: GACAGCTGTCAGGTGATTCCAGTTCTTCCACAAGTG...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGCACTTTAGCTTGCTaGATTCCATCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQCTLAC*IPSDCV
Trigger: AACACAGTCAGATGGAATCCAGCAAGCTAAAGTGCA...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGAATTCCGCACCATACTaGCTTCTTGAGGGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMNSAPY*LLEGEK
Trigger: TTTTTCACCCTCAAGAAGTCAGTATGGTGCGGAATT...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGCACGTAGCTGTTTCTTaGTTCTGTCCATTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMHVAVS*FCPLRS
Trigger: AGACCTTAATGGACAGAATCAAGAAACAGCTACGTG...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGATTTGCACTTTAGCTTaGTGGATTCCATCTGACTGT +
Preference number: 4 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQICTLA*WIPSDC
Trigger: ACAGTCAGATGGAATCCAGCAAGCTAAAGTGCAAAT...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCCCATCCAATATGGCTTaGACAGATCTTACACTGGGC +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIPSNMA*TDLTLG
Trigger: GCCCAGTGTAAGATCTGTGCAAGCCATATTGGATGG...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp GAACGAGTGAAAGTGTTCGCCTTCATACAGCTTACGGTTTTAGGTAGTCATGGATCACAGCGAAGTCGCTaGATAGCACTGCCAATTTTA +
Preference number: 4 (lower is better)
Translates to: ERVKVFAFIQLTVLGSHGSQRSR*IALPIL
Trigger: TAAAATTGGCAGTGCTATCCAGCGACTTCGCTGTGA...TCCATGACTACCTAAAACCGTAAGCTGTATGAAGGCGAACACTTTCACTCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAACAGTGTCTGGGATCGTaGGCAACAGAGCAGATCGCG +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKQCLGS*ATEQIA
Trigger: CGCGATCTGCTCTGTTGCCCACGATCCCAGACACTG...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp AATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCAGAACTGGAATCACCTaGCAGCTGTCGTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: NIAIQGGWVMNHESCVSFRTGIT*QLSSSC
Trigger: GCACGATGACGACAGCTGTCAGGTGATTCCAGTTCT...GAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR GCA 90 bp TCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCAATAGGCATATATCTCTaGTGTTGTTCCAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: SVYKMVTSQMSVSSGDLAIGIYL*CCSKLC
Trigger: GCACAGTTTGGAACAACAGCAGAGATATATGCCTAT...TGCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGCTAGACTGCCGTTCATaGTTGTTTCCTAAAGTATAC +
Preference number: 4 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMLDCRS*LFPKVY
Trigger: GTATACTTTAGGAAACAAGCATGAACGGCAGTCTAG...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACACTTGTGGAAGAACTaGAATCACCTGACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPHLWKN*NHLTAV
Trigger: GACAGCTGTCAGGTGATTCCAGTTCTTCCACAAGTG...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATCACTTGTGGAAGAACTaGAATCACCTGACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNHLWKN*NHLTAV
Trigger: GACAGCTGTCAGGTGATTCCAGTTCTTCCACAAGTG...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp AGCTGGAATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTCACTTGTGGAAGAACTaGAATCACCTGACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SWNIAIQGGWVMNHESCVHLWKN*NHLTAV
Trigger: GACAGCTGTCAGGTGATTCCAGTTCTTCCACAAGTG...AACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CCA 90 bp TCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCAAACTTCCATCCAATATaGCTTGCACAGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: SVYKMVTSQMSVSSGDLANFHPI*LAQILH
Trigger: GTGTAAGATCTGTGCAAGCCATATTGGATGGAAGTT...TGCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAAGAACTGGAATCACCTaGCAGCTGTCGTCATCGTGC +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKRTGIT*QLSSSC
Trigger: GCACGATGACGACAGCTGTCAGGTGATTCCAGTTCT...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCAATTCCGCACCATACTaGCTTCTTGAGGGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRINSAPY*LLEGEK
Trigger: TTTTTCACCCTCAAGAAGTCAGTATGGTGCGGAATT...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTTTAGCTCAAGGACTTTaGACCTTTGTCTTCCAATTG +
Preference number: 4 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCLAQGL*TFVFQL
Trigger: CAATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAA...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp AATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCAACTGCAGACATGGTTaGAGGCAACACACATTCGGG +
Preference number: 4 (lower is better)
Translates to: NIAIQGGWVMNHESCVSFNCRHG*RQHTFG
Trigger: CCCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTT...GAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR TCA 90 bp GAACGAGTGAAAGTGTTCGCCTTCATACAGCTTACGGTTTTAGGTAGTCATGGATTGAGGGATTCTAATTaGACTGCAGACATGGTTGAA +
Preference number: 4 (lower is better)
Translates to: ERVKVFAFIQLTVLGSHGLRDSN*TADMVE
Trigger: TTCAACCATGTCTGCAGTTCAATTAGAATCCCTCAA...TCCATGACTACCTAAAACCGTAAGCTGTATGAAGGCGAACACTTTCACTCGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTAGACCTAGCACCCTATaGCTTATGAGTGAAAATTAC +
Preference number: 4 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCRPSTL*LMSENY
Trigger: GTAATTTTCACTCATAAGTCATAGGGTGCTAGGTCT...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGCTCTTCTGGTATTTCTaGCACCATTTATATGAACAT +
Preference number: 4 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQLFWYF*HHLYEH
Trigger: ATGTTCATATAAATGGTGGCAGAAATACCAGAAGAG...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGGTTTCACTTAGAAACTaGAACCCTCCAAGTAATGTT +
Preference number: 4 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMVSLRN*NPPSNV
Trigger: AACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAAC...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCATCACAGCGAAGTCGCTaGATAGCACTGCCAATTTTA +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPSQRSR*IALPIL
Trigger: TAAAATTGGCAGTGCTATCCAGCGACTTCGCTGTGA...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCGTATCAAGTTTAGTCTaGGTGAGGGGACATGTTTTG +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIVSSLV*VRGHVL
Trigger: CAAAACATGTCCCCTCACCCAGACTAAACTTGATAC...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAAATTCCGCACCATACTaGCTTCTTGAGGGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPNSAPY*LLEGEK
Trigger: TTTTTCACCCTCAAGAAGTCAGTATGGTGCGGAATT...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCTTAGCTCAAGGACTTTaGACCTTTGTCTTCCAATTG +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRILAQGL*TFVFQL
Trigger: CAATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAA...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATAACTGCAGACATGGTTaGAGGCAACACACATTCGGG +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYNCRHG*RQHTFG
Trigger: CCCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTT...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAAACTGCAGACATGGTTaGAGGCAACACACATTCGGG +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKNCRHG*RQHTFG
Trigger: CCCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTT...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCTTGAGGGATTCTAATTaGACTGCAGACATGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRILRDSN*TADMVE
Trigger: TTCAACCATGTCTGCAGTTCAATTAGAATCCCTCAA...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp GAACGAGTGAAAGTGTTCGCCTTCATACAGCTTACGGTTTTAGGTAGTCATGGAATATCTGGCACTTATTaGGGGATTCTAATTGAACTG +
Preference number: 4 (lower is better)
Translates to: ERVKVFAFIQLTVLGSHGISGTY*GILIEL
Trigger: CAGTTCAATTAGAATCCCTCAATAAGTGCCAGATAT...TCCATGACTACCTAAAACCGTAAGCTGTATGAAGGCGAACACTTTCACTCGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR TCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCATTCATGTCCCATCAATaGCATGCTACCAGACATATC +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPFMSHQ*HATRHI
Trigger: GATATGTCTGGTAGCATGTCATTGATGGGACATGAA...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCATTTGCACTTTAGCTTaGTGGATTCCATCTGACTGT +
Preference number: 4 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIICTLA*WIPSDC
Trigger: ACAGTCAGATGGAATCCAGCAAGCTAAAGTGCAAAT...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCATCTGGTATTCTAGACTaGCGTTCATGCTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPSGILD*RSCLFP
Trigger: AGGAAACAAGCATGAACGGCAGTCTAGAATACCAGA...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTGCTTCTTTACTATCCTaGTCTTCAACTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCASLLS*SSTSIS
Trigger: TGAAATGGAAGTTGAAGACCAGGATAGTAAAGAAGC...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp AGGATCAAATGTAGCTGGAATATTGCCATACAAGGTGGCTGGGTAATGAATCATTGCACTTTAGCTTGCTaGATTCCATCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: RIKCSWNIAIQGGWVMNHCTLAC*IPSDCV
Trigger: AACACAGTCAGATGGAATCCAGCAAGCTAAAGTGCA...ATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCTACATTTGATCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAGCACAGATCTTACACTaGGCAACAGTCCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKAQILH*ATVQAY
Trigger: GTATGCCTGGACTGTTGCCCAGTGTAAGATCTGTGC...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATGCACAGATCTTACACTaGGCAACAGTCCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYAQILH*ATVQAY
Trigger: GTATGCCTGGACTGTTGCCCAGTGTAAGATCTGTGC...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTTCATCTTCAGTGTCTaGGATCGTGGGCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRFIFSV*DRGQQS
Trigger: GCTCTGTTGCCCACGATCCCAGACACTGAAGATGAA...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATTGTTATTTAGAGCACTaGTACAGATACGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNCYLEH*YRYAVP
Trigger: TGGGACAGCGTATCTGTACCAGTGCTCTAAATAACA...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCATGTTATTTAGAGCACTaGTACAGATACGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPCYLEH*YRYAVP
Trigger: TGGGACAGCGTATCTGTACCAGTGCTCTAAATAACA...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCATTAGCTCAAGGACTTTaGACCTTTGTCTTCCAATTG +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPLAQGL*TFVFQL
Trigger: CAATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAA...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp AGCTGGAATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTTAGCTCAAGGACTTTaGACCTTTGTCTTCCAATTG +
Preference number: 4 (lower is better)
Translates to: SWNIAIQGGWVMNHESCVLAQGL*TFVFQL
Trigger: CAATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAA...AACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR TCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGTCCAGGCATACCTaGATATTTCATTTTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPQSRHT*IFHFWL
Trigger: CAACCAAAAATGAAATATTCAGGTATGCCTGGACTG...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424814.5
CDS-3UTR GCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACTGTACATTGCTGTATaGAAGAACAGCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPLYIAV*KNSKGS
Trigger: AGAACCTTTGCTGTTCTTGCATACAGCAATGTACAG...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp TGTGTTAGGTGCATTAAACGTGGTAATGAACGAGTGAAAGTGTTCGCCTTCATACTGTACATTGCTGTATaGAAGAACAGCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: CVRCIKRGNERVKVFAFILYIAV*KNSKGS
Trigger: AGAACCTTTGCTGTTCTTGCATACAGCAATGTACAG...TATGAAGGCGAACACTTTCACTCGTTCATTACCACGTTTAATGCACCTAACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAATAGGCATATATCTCTaGTGTTGTTCCAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPIGIYL*CCSKLC
Trigger: GCACAGTTTGGAACAACAGCAGAGATATATGCCTAT...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAATTTGCACTTTAGCTTaGTGGATTCCATCTGACTGT +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPICTLA*WIPSDC
Trigger: ACAGTCAGATGGAATCCAGCAAGCTAAAGTGCAAAT...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp AGGATCAAATGTAGCTGGAATATTGCCATACAAGGTGGCTGGGTAATGAATCATATTTGCACTTTAGCTTaGTGGATTCCATCTGACTGT +
Preference number: 4 (lower is better)
Translates to: RIKCSWNIAIQGGWVMNHICTLA*WIPSDC
Trigger: ACAGTCAGATGGAATCCAGCAAGCTAAAGTGCAAAT...ATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCTACATTTGATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR GCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAACCATCCAATATGGCTTaGACAGATCTTACACTGGGC +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKPSNMA*TDLTLG
Trigger: GCCCAGTGTAAGATCTGTGCAAGCCATATTGGATGG...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAGTCCCATCAATGACATaGTACCAGACATATCAGATT +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPVPSMT*YQTYQI
Trigger: AATCTGATATGTCTGGTAGCATGTCATTGATGGGAC...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGCACTTGTGGAAGAACTaGAATCACCTGACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRHLWKN*NHLTAV
Trigger: GACAGCTGTCAGGTGATTCCAGTTCTTCCACAAGTG...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAAACTTCCATCCAATATaGCTTGCACAGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPNFHPI*LAQILH
Trigger: GTGTAAGATCTGTGCAAGCCATATTGGATGGAAGTT...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp CTTTTACATAAAGTAGCTGCCTGTGCAATTTTTAGAGGATCAAATGTAGCTGGAAATTCCGCACCATACTaGCTTCTTGAGGGTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LLHKVAACAIFRGSNVAGNSAPY*LLEGEK
Trigger: TTTTTCACCCTCAAGAAGTCAGTATGGTGCGGAATT...TCCAGCTACATTTGATCCTCTAAAAATTGCACAGGCAGCTACTTTATGTAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR TCA 90 bp TCCATTGATTTATTAATTACACAGATGTTTGAATGCTTACCACAGGTCAATCCCGTGGTAATGAACGAGTaGAAGTGTTCGCCTTCATAC +
Preference number: 4 (lower is better)
Translates to: SIDLLITQMFECLPQVNPVVMNE*KCSPSY
Trigger: GTATGAAGGCGAACACTTTCACTCGTTCATTACCAC...GGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp TGTGTTAGGTGCATTAAACGTGGTAATGAACGAGTGAAAGTGTTCGCCTTCATAAATCCCTGTGTTAGGTaGATTAAACGTGGTAATGAA +
Preference number: 4 (lower is better)
Translates to: CVRCIKRGNERVKVFAFINPCVR*IKRGNE
Trigger: TTCATTACCACGTTTAATGCACCTAACACAGGGATT...TATGAAGGCGAACACTTTCACTCGTTCATTACCACGTTTAATGCACCTAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp AGGATCAAATGTAGCTGGAATATTGCCATACAAGGTGGCTGGGTAATGAATCATGCTTCTTTACTATCCTaGTCTTCAACTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: RIKCSWNIAIQGGWVMNHASLLS*SSTSIS
Trigger: TGAAATGGAAGTTGAAGACCAGGATAGTAAAGAAGC...ATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCTACATTTGATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAATCACAGCGAAGTCGCTaGATAGCACTGCCAATTTTA +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKSQRSR*IALPIL
Trigger: TAAAATTGGCAGTGCTATCCAGCGACTTCGCTGTGA...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATTCACAGCGAAGTCGCTaGATAGCACTGCCAATTTTA +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYSQRSR*IALPIL
Trigger: TAAAATTGGCAGTGCTATCCAGCGACTTCGCTGTGA...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp AATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCGCCATACAAGGTGGCTaGGTAATGAATCATGAAAGT +
Preference number: 4 (lower is better)
Translates to: NIAIQGGWVMNHESCVSFAIQGG*VMNHES
Trigger: ACTTTCATGATTCATTACCCAGCCACCTTGTATGGC...GAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR TCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAATGCAAAGTCCTGCCATaGAATTCTTCCATATCAGCA +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKCKVLP*NSSISA
Trigger: TGCTGATATGGAAGAATTTCATGGCAGGACTTTGCA...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATTGCAAAGTCCTGCCATaGAATTCTTCCATATCAGCA +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYCKVLP*NSSISA
Trigger: TGCTGATATGGAAGAATTTCATGGCAGGACTTTGCA...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp ATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCTTATTGAGGGATTCTAATTaGACTGCAGACATGGTTGAA +
Preference number: 4 (lower is better)
Translates to: IAIQGGWVMNHESCVSFLLRDSN*TADMVE
Trigger: TTCAACCATGTCTGCAGTTCAATTAGAATCCCTCAA...TAAGAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR TCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAACACGTAGCTGTTTCTTaGTTCTGTCCATTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKHVAVS*FCPLRS
Trigger: AGACCTTAATGGACAGAATCAAGAAACAGCTACGTG...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAATTCATGTCCCATCAATaGCATGCTACCAGACATATC +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKFMSHQ*HATRHI
Trigger: GATATGTCTGGTAGCATGTCATTGATGGGACATGAA...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTTCATGTCCCATCAATaGCATGCTACCAGACATATC +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRFMSHQ*HATRHI
Trigger: GATATGTCTGGTAGCATGTCATTGATGGGACATGAA...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp TCCATTGATTTATTAATTACACAGATGTTTGAATGCTTACCACAGGTCAATCCCTGCTGGCTAACATGGTaGAACCCCATTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SIDLLITQMFECLPQVNPCWLTW*NPISTK
Trigger: TTTAGTAGAAATGGGGTTTCACCATGTTAGCCAGCA...GGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR GCA 90 bp AATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCCTGTACATTGCTGTATaGAAGAACAGCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: NIAIQGGWVMNHESCVSFLYIAV*KNSKGS
Trigger: AGAACCTTTGCTGTTCTTGCATACAGCAATGTACAG...GAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR GCA 90 bp CTTTTACATAAAGTAGCTGCCTGTGCAATTTTTAGAGGATCAAATGTAGCTGGAATAGGCATATATCTCTaGTGTTGTTCCAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: LLHKVAACAIFRGSNVAGIGIYL*CCSKLC
Trigger: GCACAGTTTGGAACAACAGCAGAGATATATGCCTAT...TCCAGCTACATTTGATCCTCTAAAAATTGCACAGGCAGCTACTTTATGTAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR GCA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATCTCTTCTGGTATTTCTaGCACCATTTATATGAACAT +
Preference number: 4 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNLFWYF*HHLYEH
Trigger: ATGTTCATATAAATGGTGGCAGAAATACCAGAAGAG...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTCTGGTATTCTAGACTaGCGTTCATGCTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRSGILD*RSCLFP
Trigger: AGGAAACAAGCATGAACGGCAGTCTAGAATACCAGA...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp AGGATCAAATGTAGCTGGAATATTGCCATACAAGGTGGCTGGGTAATGAATCATACCTTCTGGTATTTCTaGCACCATTTATATGAACAT +
Preference number: 4 (lower is better)
Translates to: RIKCSWNIAIQGGWVMNHTFWYF*HHLYEH
Trigger: ATGTTCATATAAATGGTGGCAGAAATACCAGAAGGT...ATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCTACATTTGATCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR GCA 90 bp TCCATTGATTTATTAATTACACAGATGTTTGAATGCTTACCACAGGTCAATCCCACACAGATGTTTGAATaGTTACCACAGGTCAATCCC +
Preference number: 4 (lower is better)
Translates to: SIDLLITQMFECLPQVNPTQMFE*LPQVNP
Trigger: GGGATTGACCTGTGGTAAGCATTCAAACATCTGTGT...GGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAATGCACTTTAGCTTGCTaGATTCCATCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKCTLAC*IPSDCV
Trigger: AACACAGTCAGATGGAATCCAGCAAGCTAAAGTGCA...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATTGCACTTTAGCTTGCTaGATTCCATCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYCTLAC*IPSDCV
Trigger: AACACAGTCAGATGGAATCCAGCAAGCTAAAGTGCA...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTGCACTTTAGCTTGCTaGATTCCATCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRCTLAC*IPSDCV
Trigger: AACACAGTCAGATGGAATCCAGCAAGCTAAAGTGCA...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAACCAAGTAGATGTTTCTaGTATTCTAGACTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKPSRCF*YSRLPF
Trigger: GAACGGCAGTCTAGAATACCAGAAACATCTACTTGG...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGCCAAGTAGATGTTTCTaGTATTCTAGACTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRPSRCF*YSRLPF
Trigger: GAACGGCAGTCTAGAATACCAGAAACATCTACTTGG...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTGTTATTTAGAGCACTaGTACAGATACGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRCYLEH*YRYAVP
Trigger: TGGGACAGCGTATCTGTACCAGTGCTCTAAATAACA...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGGTATCAAGTTTAGTCTaGGTGAGGGGACATGTTTTG +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRVSSLV*VRGHVL
Trigger: CAAAACATGTCCCCTCACCCAGACTAAACTTGATAC...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTTGAGGGATTCTAATTaGACTGCAGACATGGTTGAA +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRLRDSN*TADMVE
Trigger: TTCAACCATGTCTGCAGTTCAATTAGAATCCCTCAA...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp AATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCATATCTGGCACTTATTaGGGGATTCTAATTGAACTG +
Preference number: 4 (lower is better)
Translates to: NIAIQGGWVMNHESCVSFISGTY*GILIEL
Trigger: CAGTTCAATTAGAATCCCTCAATAAGTGCCAGATAT...GAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR GCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGCATCGTGCAAAGTCCTaGCATGAAATTCTTCCATAT +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRHRAKS*HEILPY
Trigger: ATATGGAAGAATTTCATGGCAGGACTTTGCACGATG...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGCTGTACATTGCTGTATaGAAGAACAGCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRLYIAV*KNSKGS
Trigger: AGAACCTTTGCTGTTCTTGCATACAGCAATGTACAG...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATCTGTACATTGCTGTATaGAAGAACAGCAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYLYIAV*KNSKGS
Trigger: AGAACCTTTGCTGTTCTTGCATACAGCAATGTACAG...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAATAGGCATATATCTCTaGTGTTGTTCCAAACTGTGC +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKIGIYL*CCSKLC
Trigger: GCACAGTTTGGAACAACAGCAGAGATATATGCCTAT...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAACTAGACTGCCGTTCATaGTTGTTTCCTAAAGTATAC +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKLDCRS*LFPKVY
Trigger: GTATACTTTAGGAAACAAGCATGAACGGCAGTCTAG...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGGTCCCATCAATGACATaGTACCAGACATATCAGATT +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRVPSMT*YQTYQI
Trigger: AATCTGATATGTCTGGTAGCATGTCATTGATGGGAC...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATGTCCCATCAATGACATaGTACCAGACATATCAGATT +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYVPSMT*YQTYQI
Trigger: AATCTGATATGTCTGGTAGCATGTCATTGATGGGAC...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAAACTTCCATCCAATATaGCTTGCACAGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKNFHPI*LAQILH
Trigger: GTGTAAGATCTGTGCAAGCCATATTGGATGGAAGTT...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAATATCTGGCACTTATTaGGGGATTCTAATTGAACTG +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKISGTY*GILIEL
Trigger: CAGTTCAATTAGAATCCCTCAATAAGTGCCAGATAT...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR TCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGATATCTGGCACTTATTaGGGGATTCTAATTGAACTG +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRISGTY*GILIEL
Trigger: CAGTTCAATTAGAATCCCTCAATAAGTGCCAGATAT...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAGTTTCACTTAGAAACTaGAACCCTCCAAGTAATGTT +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKVSLRN*NPPSNV
Trigger: AACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAAC...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATGTTTCACTTAGAAACTaGAACCCTCCAAGTAATGTT +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYVSLRN*NPPSNV
Trigger: AACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAAC...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATGCTTCTTTACTATCCTaGTCTTCAACTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: QFHLETATLQVMLCLLRYASLLS*SSTSIS
Trigger: TGAAATGGAAGTTGAAGACCAGGATAGTAAAGAAGC...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAGCTTCTTTACTATCCTaGTCTTCAACTTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKASLLS*SSTSIS
Trigger: TGAAATGGAAGTTGAAGACCAGGATAGTAAAGAAGC...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAACTCTTCTGGTATTTCTaGCACCATTTATATGAACAT +
Preference number: 4 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKLFWYF*HHLYEH
Trigger: ATGTTCATATAAATGGTGGCAGAAATACCAGAAGAG...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR GCA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGCTCTTCTGGTATTTCTaGCACCATTTATATGAACAT +
Preference number: 4 (lower is better)
Translates to: IQFHLETATLQVMLCLLRLFWYF*HHLYEH
Trigger: ATGTTCATATAAATGGTGGCAGAAATACCAGAAGAG...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS TCA 90 bp GGCAGGAGCGGCAGGTGGTTGCCCATGTTGTGCGCAGCGTCCTGCTaGTCTCCTTCGCCGGCCATGTCTGTTTACCCGCAAAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: GRSGRWLPMLCAASC*SPSPAMSVYPQRRL
Trigger: CAGCCTCCTTTGCGGGTAAACAGACATGGCCGGCGAAGGAGATCAGCAGGACGCTGCGCACAACATGGGCAACCACCTGCCGCTCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGAGGAGCGGCAGGTGGTaGCCCATGTTGTGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQRSGRW*PMLCAA
Trigger: CGCTGCGCACAACATGGGCAACCACCTGCCGCTCCT...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS GCA 90 bp CCAGCGGTATATGCTCCCAACTCCCTTGCAGATTGTTCTGTTCTATaGCCCTGCTTGGAACTGGCCTCTCTTCTGCCTTCTATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: PAVYAPNSLADCSVL*PCLELASLLPSIRP
Trigger: TGGCCTAATAGAAGGCAGAAGAGAGGCCAGTTCCAAGCAGGGGCATAGAACAGAACAATCTGCAAGGGAGTTGGGAGCATATACCGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS-3UTR CAA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCAGGAGCGGCAGGTGGTaGCCCATGTTGTGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIRSGRW*PMLCAA
Trigger: CGCTGCGCACAACATGGGCAACCACCTGCCGCTCCT...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS GCA 90 bp GAGCACACGAACAGCTCACAAGCCTCTGGTCTCCCTATCCTCTTATaGTCCGAGAGGCCTTCAATCCTAAAGAAGCCAAATCCCAAACAA +
Preference number: 5 (lower is better)
Translates to: EHTNSSQASGLPILL*SERPSILKKPNPKQ
Trigger: TTGTTTGGGATTTGGCTTCTTTAGGATTGAAGGCCTCTCGGAGCATAAGAGGATAGGGAGACCAGAGGCTTGTGAGCTGTTCGTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498700.5
CDS GCA 90 bp GTATATGCTCCCAACTCCCTTGCAGATTGTTCTGTTCTATGCCCCTaGTTGGAACTGGCCTCTCTTCTGCCTTCTATTAGGCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: VYAPNSLADCSVLCP*LELASLLPSIRPFL
Trigger: CAGAAATGGCCTAATAGAAGGCAGAAGAGAGGCCAGTTCCAAGCAGGGGCATAGAACAGAACAATCTGCAAGGGAGTTGGGAGCATATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS-3UTR CAA 90 bp ATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCTTAAGGAGCGGCAGGTGGTaGCCCATGTTGTGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: IAIQGGWVMNHESCVSFLRSGRW*PMLCAA
Trigger: CGCTGCGCACAACATGGGCAACCACCTGCCGCTCCT...TAAGAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CAA 90 bp TCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCAAGACATAATCGAAACTaGGATGGGCCGGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SVYKMVTSQMSVSSGDLARHNRN*DGPGVV
Trigger: CACCACACCCGGCCCATCCAAGTTTCGATTATGTCT...TGCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS TCA 90 bp CTTTCAAACATCATAGCAATGCTACAAAAACCACAGCTGTCCTGGTaGGCACACGAACAGCTCACAAGCCTCTGGTCTCCCTATCCTCTT +
Preference number: 5 (lower is better)
Translates to: LSNIIAMLQKPQLSW*AHEQLTSLWSPYPL
Trigger: AAGAGGATAGGGAGACCAGAGGCTTGTGAGCTGTTCGTGTGCTCACCAGGACAGCTGTGGTTTTTGTAGCATTGCTATGATGTTTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498700.5
CDS-3UTR CAA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGAGGAGCGGCAGGTGGTaGCCCATGTTGTGCGCAGCG +
Preference number: 5 (lower is better)
Translates to: IQFHLETATLQVMLCLLRRSGRW*PMLCAA
Trigger: CGCTGCGCACAACATGGGCAACCACCTGCCGCTCCT...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTCCATCCAATATGGCTaGCACAGATCTTACACTGGG +
Preference number: 5 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQSIQYG*HRSYTG
Trigger: CCCAGTGTAAGATCTGTGCAAGCCATATTGGATGGA...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp GAACGAGTGAAAGTGTTCGCCTTCATACAGCTTACGGTTTTAGGTAGTCATGGAGAACTGCAGACATGGTaGAAGGCAACACACATTCGG +
Preference number: 5 (lower is better)
Translates to: ERVKVFAFIQLTVLGSHGELQTW*KATHIR
Trigger: CCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTTC...TCCATGACTACCTAAAACCGTAAGCTGTATGAAGGCGAACACTTTCACTCGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGTCCATCCAATATGGCTaGCACAGATCTTACACTGGG +
Preference number: 5 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMSIQYG*HRSYTG
Trigger: CCCAGTGTAAGATCTGTGCAAGCCATATTGGATGGA...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS TCA 90 bp CCTCTCCTGTACATGCGAAATAACAGCCTGCTTTGGCTTCAACACTaGCCACTGCAATTACCCATGAGAGGGAATGTATTAAGCAAATGG +
Preference number: 5 (lower is better)
Translates to: PLLYMRNNSLLWLQH*PLQLPMRGNVLSKW
Trigger: CCATTTGCTTAATACATTCCCTCTCATGGGTAATTGCAGTGGTCAGTGTTGAAGCCAAAGCAGGCTGTTATTTCGCATGTACAGGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478353.1
CDS-3UTR CAA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGGAGCGAGACTCCATTTaGTCTGGACTTATTTCATCT +
Preference number: 5 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQERDSI*SGLISS
Trigger: AGATGAAATAAGTCCAGACAAAATGGAGTCTCGCTC...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS GCA 90 bp AACCAAATTCCTAACCTCACATTCTTACCCAACCTCTCCTGTACATaGGAAATAACAGCCTGCTTTGGCTTCAACACTGACCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: NQIPNLTFLPNLSCT*EITACFGFNTDHCN
Trigger: ATTGCAGTGGTCAGTGTTGAAGCCAAAGCAGGCTGTTATTTCGCATGTACAGGAGAGGTTGGGTAAGAATGTGAGGTTAGGAATTTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478353.1
CDS-3UTR CAA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTTCCCTTTCCTGTACATaGCTGTATGCAAGAACAGCA +
Preference number: 5 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCSLSCT*LYARTA
Trigger: TGCTGTTCTTGCATACAGCAATGTACAGGAAAGGGA...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp TCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGTGGAGACCTAGCAACATTCGGGAAGAATTaGCACTTTAGCTTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: SVYKMVTSQMSVSSGDLATFGKN*HFSLLD
Trigger: ATCCAGCAAGCTAAAGTGCAAATTCTTCCCGAATGT...TGCTAGGTCTCCACTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGAACTGCAGACATGGTaGAAGGCAACACACATTCGG +
Preference number: 5 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNELQTW*KATHIR
Trigger: CCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTTC...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp AACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTCCAGCCTATCAGATTCAAGTaGCAAGCCTTATACACAGTA +
Preference number: 5 (lower is better)
Translates to: NPQQVSVQNGDIPNVCLQPIRFK*QALYTV
Trigger: TACTGTGTATAAGGCTTGCAACTTGAATCTGATAGG...CTGGAGACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTGGTGACATGTCTTTTTaGGTGGCCGTAAACTTCCAT +
Preference number: 5 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCGDMSF*VAVNFH
Trigger: ATGGAAGTTTACGGCCACCAAAAAAGACATGTCACC...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS GCA 90 bp CTGTTCTTCTCGATAGGCATATATCTCTGCTGTTGTTCCAAACTGTaGTTCCCTTTCCTGTACATTGCTGTATGCAAGAACAGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: LFFSIGIYLCCCSKL*FPFLYIAVCKNSKG
Trigger: ACCTTTGCTGTTCTTGCATACAGCAATGTACAGGAAAGGGAAGCACAGTTTGGAACAACAGCAGAGATATATGCCTATCGAGAAGAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
ENST00000450014.1
ENST00000480249.5
ENST00000491834.5
ENST00000492178.1
ENST00000498700.5
ENST00000639284.1
CDS-3UTR CAA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCCACCATACTGACTTCTaGAGGGTGAAAAAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIHHTDF*RVKKLK
Trigger: CTTCAGCTTTTTCACCCTCAAGAAGTCAGTATGGTG...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGAACATTGGTCTTCTCTaGAGACAGGTTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMNIGLL*RQVLKE
Trigger: TTCCTTCAAAACCTGTCTCAAGAGAAGACCAATGTT...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATTCCATCCAATATGGCTaGCACAGATCTTACACTGGG +
Preference number: 5 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNSIQYG*HRSYTG
Trigger: CCCAGTGTAAGATCTGTGCAAGCCATATTGGATGGA...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS TCA 90 bp AATTCACAGCGAAGTCGCTGGATAGCACTGCCAATTTTAAGGAGCTaGATTCTCAATACATCATCAATAGGAAGACAAGCAGCTACTCTG +
Preference number: 5 (lower is better)
Translates to: NSQRSRWIALPILRS*ILNTSSIGRQAATL
Trigger: CAGAGTAGCTGCTTGTCTTCCTATTGATGATGTATTGAGAATTCAGCTCCTTAAAATTGGCAGTGCTATCCAGCGACTTCGCTGTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
ENST00000459840.5
ENST00000488263.5
ENST00000491834.5
ENST00000498442.1
ENST00000639284.1
CDS GCA 90 bp AGGCCATTTCTGACCCAGTCCATAGGGATTATGGCACCTATAAATTaGACTAGCACTTGCTATCTACATACCTTACTTGGCACCTATTTA +
Preference number: 5 (lower is better)
Translates to: RPFLTQSIGIMAPIN*TSTCYLHTLLGTYL
Trigger: TAAATAGGTGCCAAGTAAGGTATGTAGATAGCAAGTGCTAGTGCAATTTATAGGTGCCATAATCCCTATGGACTGGGTCAGAAATGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS CCA 90 bp CACACCAGGTACAATAGCTACCATTATATCCATTTCATAGGTCCTTaGAGAAGTAATTTGCTCCAGGCCCACAGAGTAAGTGACAGAAAT +
Preference number: 5 (lower is better)
Translates to: HTRYNSYHYIHFIGP*RSNLLQAHRVSDRN
Trigger: ATTTCTGTCACTTACTCTGTGGGCCTGGAGCAAATTACTTCTCCAAGGACCTATGAAATGGATATAATGGTAGCTATTGTACCTGGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS-3UTR CAA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCATCCCTTTCCTGTACATaGCTGTATGCAAGAACAGCA +
Preference number: 5 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPSLSCT*LYARTA
Trigger: TGCTGTTCTTGCATACAGCAATGTACAGGAAAGGGA...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp TGTGTTAGGTGCATTAAACGTGGTAATGAACGAGTGAAAGTGTTCGCCTTCATACATATATCTCTGCTGTaGTTCCAAACTGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: CVRCIKRGNERVKVFAFIHISLL*FQTVLP
Trigger: GGGAAGCACAGTTTGGAACAACAGCAGAGATATATG...TATGAAGGCGAACACTTTCACTCGTTCATTACCACGTTTAATGCACCTAACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTCTTAGCTCAAGGACTTaGAACCTTTGTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCLSSRT*NLCLPI
Trigger: AATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAAG...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp AATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCGAACTGCAGACATGGTaGAAGGCAACACACATTCGG +
Preference number: 5 (lower is better)
Translates to: NIAIQGGWVMNHESCVSFELQTW*KATHIR
Trigger: CCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTTC...GAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CAA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGGCCATGAAGTTAGATTaGCACAATGAAACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMAMKLD*HNETFS
Trigger: AGAGAAAGTTTCATTGTGCAAATCTAACTTCATGGC...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp ATGGCACCAAGCTACCCAAGTAGATGTTTCTGGTATTCTAGACTGCCGTTCATGTTCTGTTTCTTGACATaGTTTACAGCAAAGGGAAGT +
Preference number: 5 (lower is better)
Translates to: MAPSYPSRCFWYSRLPFMFCFLT*FTAKGS
Trigger: ACTTCCCTTTGCTGTAAACAATGTCAAGAAACAGAA...CATGAACGGCAGTCTAGAATACCAGAAACATCTACTTGGGTAGCTTGGTGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAGGTGACATGTCTTTTTaGGTGGCCGTAAACTTCCAT +
Preference number: 5 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPGDMSF*VAVNFH
Trigger: ATGGAAGTTTACGGCCACCAAAAAAGACATGTCACC...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGGTGACATGTCTTTTTaGGTGGCCGTAAACTTCCAT +
Preference number: 5 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNGDMSF*VAVNFH
Trigger: ATGGAAGTTTACGGCCACCAAAAAAGACATGTCACC...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCCTTAGCTCAAGGACTTaGAACCTTTGTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRILSSRT*NLCLPI
Trigger: AATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAAG...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAACATTCGGGAAGAATTaGCACTTTAGCTTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPTFGKN*HFSLLD
Trigger: ATCCAGCAAGCTAAAGTGCAAATTCTTCCCGAATGT...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAGAACTGCAGACATGGTaGAAGGCAACACACATTCGG +
Preference number: 5 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKELQTW*KATHIR
Trigger: CCGAATGTGTGTTGCCTTCAACCATGTCTGCAGTTC...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp ATACGAAACCCACAGCAGGTCAGTGTACAAAATGGTGACATCCCAAATGTCTGTTTCTGTTTCTTGACATaGTTTACAGCAAAGGGAAGT +
Preference number: 5 (lower is better)
Translates to: IRNPQQVSVQNGDIPNVCFCFLT*FTAKGS
Trigger: ACTTCCCTTTGCTGTAAACAATGTCAAGAAACAGAA...ACAGACATTTGGGATGTCACCATTTTGTACACTGACCTGCTGTGGGTTTCGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp AGCTTTTGTTATTTAGAGCACTGGTACAGATACGCTGTCCCATACATCAGGATCCCTATCAGATTCAAGTaGCAAGCCTTATACACAGTA +
Preference number: 5 (lower is better)
Translates to: SFCYLEHWYRYAVPYIRIPIRFK*QALYTV
Trigger: TACTGTGTATAAGGCTTGCAACTTGAATCTGATAGG...GATCCTGATGTATGGGACAGCGTATCTGTACCAGTGCTCTAAATAACAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231948.9
ENST00000432408.6
CDS GCA 90 bp GGACATACTGAAATTTTAACTTTTCAGAGGGACAAGGTAACTCATTaGAACTGGTTTAGAGTTCAGCCTACAGAGAGGTACTATGCTACT +
Preference number: 5 (lower is better)
Translates to: GHTEILTFQRDKVTH*NWFRVQPTERYYAT
Trigger: AGTAGCATAGTACCTCTCTGTAGGCTGAACTCTAAACCAGTTGCAATGAGTTACCTTGTCCCTCTGAAAAGTTAAAATTTCAGTATGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491834.5
CDS-3UTR CAA 90 bp AATATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCTCCCTTTCCTGTACATaGCTGTATGCAAGAACAGCA +
Preference number: 5 (lower is better)
Translates to: NIAIQGGWVMNHESCVSFSLSCT*LYARTA
Trigger: TGCTGTTCTTGCATACAGCAATGTACAGGAAAGGGA...GAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CAA 90 bp ATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCTTACATATATCTCTGCTGTaGTTCCAAACTGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: IAIQGGWVMNHESCVSFLHISLL*FQTVLP
Trigger: GGGAAGCACAGTTTGGAACAACAGCAGAGATATATG...TAAGAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CAA 90 bp AGGATCAAATGTAGCTGGAATATTGCCATACAAGGTGGCTGGGTAATGAATCATAAGGACTTTGAACCTTaGTCTTCCAATTGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: RIKCSWNIAIQGGWVMNHKDFEP*SSNCFH
Trigger: GTGAAAGCAATTGGAAGACAAAGGTTCAAAGTCCTT...ATGATTCATTACCCAGCCACCTTGTATGGCAATATTCCAGCTACATTTGATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CAA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAAACATTGGTCTTCTCTaGAGACAGGTTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPNIGLL*RQVLKE
Trigger: TTCCTTCAAAACCTGTCTCAAGAGAAGACCAATGTT...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATTCCATCCAATATGGCTaGCACAGATCTTACACTGGG +
Preference number: 5 (lower is better)
Translates to: QFHLETATLQVMLCLLRYSIQYG*HRSYTG
Trigger: CCCAGTGTAAGATCTGTGCAAGCCATATTGGATGGA...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CAAAGATGTCTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCAGACTGCCGTTCATGCTaGTTTCCTAAAGTATACTTA +
Preference number: 5 (lower is better)
Translates to: QRCLHVPSMTCYQTYQIPDCRSC*FPKVYL
Trigger: TAAGTATACTTTAGGAAACAAGCATGAACGGCAGTC...TGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAGACATCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGACTGCCGTTCATGCTaGTTTCCTAAAGTATACTTA +
Preference number: 5 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNDCRSC*FPKVYL
Trigger: TAAGTATACTTTAGGAAACAAGCATGAACGGCAGTC...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTCCCTTTCCTGTACATaGCTGTATGCAAGAACAGCA +
Preference number: 5 (lower is better)
Translates to: IQFHLETATLQVMLCLLRSLSCT*LYARTA
Trigger: TGCTGTTCTTGCATACAGCAATGTACAGGAAAGGGA...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATCATATATCTCTGCTGTaGTTCCAAACTGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: QFHLETATLQVMLCLLRYHISLL*FQTVLP
Trigger: GGGAAGCACAGTTTGGAACAACAGCAGAGATATATG...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAACATATATCTCTGCTGTaGTTCCAAACTGTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKHISLL*FQTVLP
Trigger: GGGAAGCACAGTTTGGAACAACAGCAGAGATATATG...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp ATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCTTAACATTCGGGAAGAATTaGCACTTTAGCTTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: IAIQGGWVMNHESCVSFLTFGKN*HFSLLD
Trigger: ATCCAGCAAGCTAAAGTGCAAATTCTTCCCGAATGT...TAAGAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CAA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATGCCATGAAGTTAGATTaGCACAATGAAACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNAMKLD*HNETFS
Trigger: AGAGAAAGTTTCATTGTGCAAATCTAACTTCATGGC...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp TGTGTTAGGTGCATTAAACGTGGTAATGAACGAGTGAAAGTGTTCGCCTTCATAGCCATGAAGTTAGATTaGCACAATGAAACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: CVRCIKRGNERVKVFAFIAMKLD*HNETFS
Trigger: AGAGAAAGTTTCATTGTGCAAATCTAACTTCATGGC...TATGAAGGCGAACACTTTCACTCGTTCATTACCACGTTTAATGCACCTAACACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp CTTCATGTCCCATCAATGACATGCTACCAGACATATCAGATTCCACAGGATAATTTCTGTTTCTTGACATaGTTTACAGCAAAGGGAAGT +
Preference number: 5 (lower is better)
Translates to: LHVPSMTCYQTYQIPQDNFCFLT*FTAKGS
Trigger: ACTTCCCTTTGCTGTAAACAATGTCAAGAAACAGAA...ATTATCCTGTGGAATCTGATATGTCTGGTAGCATGTCATTGATGGGACATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATGGTGACATGTCTTTTTaGGTGGCCGTAAACTTCCAT +
Preference number: 5 (lower is better)
Translates to: QFHLETATLQVMLCLLRYGDMSF*VAVNFH
Trigger: ATGGAAGTTTACGGCCACCAAAAAAGACATGTCACC...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS TCA 90 bp GATTTACATGATTGTTCTCAAACCTGGAGAGACATTAGAATCACCTaGAAATCATTTTTAAAAGATGCTGCAGCCTCATCACTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: DLHDCSQTWRDIRIT*KSFLKDAAASSLSG
Trigger: TCCAGAGAGTGATGAGGCTGCAGCATCTTTTAAAAATGATTTTCAGGTGATTCTAATGTCTCTCCAGGTTTGAGAACAATCATGTAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498700.5
CDS GCA 90 bp ACCCAGTCCATAGGGATTATGGCACCTATAAATTGCACTAGCACTTaGTATCTACATACCTTACTTGGCACCTATTTACTACATAATTTT +
Preference number: 5 (lower is better)
Translates to: TQSIGIMAPINCTST*YLHTLLGTYLLHNF
Trigger: AAAATTATGTAGTAAATAGGTGCCAAGTAAGGTATGTAGATAGCAAGTGCTAGTGCAATTTATAGGTGCCATAATCCCTATGGACTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS-3UTR CAA 90 bp ATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCTTACTTAGCTCAAGGACTTaGAACCTTTGTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: IAIQGGWVMNHESCVSFLLSSRT*NLCLPI
Trigger: AATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAAG...TAAGAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CAA 90 bp ATACAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGACATTCGGGAAGAATTaGCACTTTAGCTTGCTGGAT +
Preference number: 5 (lower is better)
Translates to: IQFHLETATLQVMLCLLRTFGKN*HFSLLD
Trigger: ATCCAGCAAGCTAAAGTGCAAATTCTTCCCGAATGT...CCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp ATTGCCATACAAGGTGGCTGGGTAATGAATCATGAAAGTTGTGTTTCTTTCTTAAACATTGGTCTTCTCTaGAGACAGGTTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: IAIQGGWVMNHESCVSFLNIGLL*RQVLKE
Trigger: TTCCTTCAAAACCTGTCTCAAGAGAAGACCAATGTT...TAAGAAAGAAACACAACTTTCATGATTCATTACCCAGCCACCTTGTATGGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450014.1
CDS-3UTR CAA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATAAGGACTTTGAACCTTaGTCTTCCAATTGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: QFHLETATLQVMLCLLRYKDFEP*SSNCFH
Trigger: GTGAAAGCAATTGGAAGACAAAGGTTCAAAGTCCTT...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAAAGGACTTTGAACCTTaGTCTTCCAATTGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKKDFEP*SSNCFH
Trigger: GTGAAAGCAATTGGAAGACAAAGGTTCAAAGTCCTT...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp TCCATTGATTTATTAATTACACAGATGTTTGAATGCTTACCACAGGTCAATCCCAAGGACTTTGAACCTTaGTCTTCCAATTGCTTTCAC +
Preference number: 5 (lower is better)
Translates to: SIDLLITQMFECLPQVNPKDFEP*SSNCFH
Trigger: GTGAAAGCAATTGGAAGACAAAGGTTCAAAGTCCTT...GGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAACTTAGCTCAAGGACTTaGAACCTTTGTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKLSSRT*NLCLPI
Trigger: AATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAAG...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATCTTAGCTCAAGGACTTaGAACCTTTGTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: QFHLETATLQVMLCLLRYLSSRT*NLCLPI
Trigger: AATTGGAAGACAAAGGTTCAAAGTCCTTGAGCTAAG...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS-3UTR CAA 90 bp TCCATTGATTTATTAATTACACAGATGTTTGAATGCTTACCACAGGTCAATCCCAACATTGGTCTTCTCTaGAGACAGGTTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: SIDLLITQMFECLPQVNPNIGLL*RQVLKE
Trigger: TTCCTTCAAAACCTGTCTCAAGAGAAGACCAATGTT...GGGATTGACCTGTGGTAAGCATTCAAACATCTGTGTAATTAATAAATCAATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS-3UTR CAA 90 bp CAGTTTCACTTAGAAACTGCAACCCTCCAAGTAATGTTATGTTTACTTAGGTATGACTGCCGTTCATGCTaGTTTCCTAAAGTATACTTA +
Preference number: 5 (lower is better)
Translates to: QFHLETATLQVMLCLLRYDCRSC*FPKVYL
Trigger: TAAGTATACTTTAGGAAACAAGCATGAACGGCAGTC...ATACCTAAGTAAACATAACATTACTTGGAGGGTTGCAGTTTCTAAGTGAAACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS TCA 90 bp TATGCAAAACATGCAAAAACTCATATATTGTGTCTTTGTAATTGCTaGAAAGCTGCTAAAGAGCGGAGATCAACTGCAGTTTCCTTTAGT +
Preference number: 5 (lower is better)
Translates to: YAKHAKTHILCLCNC*KAAKERRSTAVSFS
Trigger: ACTAAAGGAAACTGCAGTTGATCTCCGCTCTTTAGCAGCTTTTCAGCAATTACAAAGACACAATATATGAGTTTTTGCATGTTTTGCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS-3UTR CAA 90 bp GTTTCTGGTATTCTAGACTGCCGTTCATGCTTGTTTCCTAAAGTATACTTAAAAGCCATGAAGTTAGATTaGCACAATGAAACTTTCTCT +
Preference number: 5 (lower is better)
Translates to: VSGILDCRSCLFPKVYLKAMKLD*HNETFS
Trigger: AGAGAAAGTTTCATTGTGCAAATCTAACTTCATGGC...TTTTAAGTATACTTTAGGAAACAAGCATGAACGGCAGTCTAGAATACCAGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
CDS TCA 72 bp GCGGTGTGCGCCTGTAGTCCGAGCTACTCGGGAGGCTaGGGCAGGAGGATGGCGGGAACCCGGGAGGCGGAG +
Preference number: 6 (lower is better)
Translates to: AVCACSPSYSGG*GRRMAGTREAE
Trigger: CTCCGCCTCCCGGGTTCCCGCCATCCTCCTGCCTCAGCCTCCCGAGTAGCTCGGACTACAGGCGCACACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639284.1
CDS TCA 72 bp GGCAGGTGGTTGCCCATGTTGTGCGCAGCGTCCTGCTaGTCTCCTTCGCCGGCCATGTCTGTTTACCCGCAA +
Preference number: 6 (lower is better)
Translates to: GRWLPMLCAASC*SPSPAMSVYPQ
Trigger: TTGCGGGTAAACAGACATGGCCGGCGAAGGAGATCAGCAGGACGCTGCGCACAACATGGGCAACCACCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000432408.6
ENST00000478353.1
ENST00000639284.1
CDS GCA 72 bp CTTCCTCACTCTCTGCAGGCAGGAGCGGCAGGTGGTTaGCCATGTTGTGCGCAGCGTCCTGCTGATCTCCTT +
Preference number: 6 (lower is better)
Translates to: LPHSLQAGAAGG*PCCAQRPADLL
Trigger: AAGGAGATCAGCAGGACGCTGCGCACAACATGGGCAACCACCTGCCGCTCCTGCCTGCAGAGAGTGAGGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231948.9
ENST00000478353.1
ENST00000498700.5
ENST00000639284.1
CDS GCA 72 bp CTTCTTCCTCACTCTCAGGCAGGAGCGGCAGGTGGTTaGCCATGTTGTGCGCAGCGTCCTGCTGATCTCCTT +
Preference number: 6 (lower is better)
Translates to: LLPHSQAGAAGG*PCCAQRPADLL
Trigger: AAGGAGATCAGCAGGACGCTGCGCACAACATGGGCAACCACCTGCCGCTCCTGCCTGAGAGTGAGGAAGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432408.6
CDS CAA 90 bp TTCTCACTCACTGTCTTAACCCAGCGGTATATGCTCCCAACTCCCTaGCAGATTGTTCTGTTCTATGCCCCTGCTTGGAACTGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: FSLTVLTQRYMLPTP*QIVLFYAPAWNWPL
Trigger: GAGAGGCCAGTTCCAAGCAGGGGCATAGAACAGAACAATCTGCAAGGGAGTTGGGAGCATATACCGCTGGGTTAAGACAGTGAGTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS TCA 72 bp ATCATAGCAATGCTACAAAAACCACAGCTGTCCTGGTaGGCACACGAACAGCTCACAAGCCTCTGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: IIAMLQKPQLSW*AHEQLTSLWSP
Trigger: GGGAGACCAGAGGCTTGTGAGCTGTTCGTGTGCTCACCAGGACAGCTGTGGTTTTTGTAGCATTGCTATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498700.5
CDS GCA 72 bp CCCAACTCCCTTGCAGATTGTTCTGTTCTATGCCCCTaGTTGGAACTGGCCTCTCTTCTGCCTTCTATTAGG +
Preference number: 6 (lower is better)
Translates to: PNSLADCSVLCP*LELASLLPSIR
Trigger: CCTAATAGAAGGCAGAAGAGAGGCCAGTTCCAAGCAGGGGCATAGAACAGAACAATCTGCAAGGGAGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS GCA 72 bp TATGCTCCCAACTCCCTTGCAGATTGTTCTGTTCTATaGCCCTGCTTGGAACTGGCCTCTCTTCTGCCTTCT +
Preference number: 6 (lower is better)
Translates to: YAPNSLADCSVL*PCLELASLLPS
Trigger: AGAAGGCAGAAGAGAGGCCAGTTCCAAGCAGGGGCATAGAACAGAACAATCTGCAAGGGAGTTGGGAGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS CAA 90 bp TATGCTCCCAACTCCCTTGCAGATTGTTCTGTTCTATGCCCCTGCTaGGAACTGGCCTCTCTTCTGCCTTCTATTAGGCCATTTCTGACC +
Preference number: 6 (lower is better)
Translates to: YAPNSLADCSVLCPC*ELASLLPSIRPFLT
Trigger: GGTCAGAAATGGCCTAATAGAAGGCAGAAGAGAGGCCAGTTCCAAGCAGGGGCATAGAACAGAACAATCTGCAAGGGAGTTGGGAGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS CCA 72 bp AACTTCCATCCAATATGGCTTGCACAGATCTTACACTaGGCAACAGTCCAGGCATACCCAGGAAACCAGCTG +
Preference number: 6 (lower is better)
Translates to: NFHPIWLAQILH*ATVQAYPGNQL
Trigger: CAGCTGGTTTCCTGGGTATGCCTGGACTGTTGCCCAGTGTAAGATCTGTGCAAGCCATATTGGATGGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231948.9
ENST00000432408.6
ENST00000459840.5
ENST00000488263.5
ENST00000491834.5
ENST00000498442.1
ENST00000639284.1
CDS TCA 72 bp TCCCAGTTTAAATGCCTCCATTTTCGTATGCAGCAATaGTCAAGCTCCAGCTCCTTTGCCCAGCACTGTCTG +
Preference number: 6 (lower is better)
Translates to: SQFKCLHFRMQQ*SSSSSFAQHCL
Trigger: CAGACAGTGCTGGGCAAAGGAGCTGGAGCTTGATCATTGCTGCATACGAAAATGGAGGCATTTAAACTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS GCA 72 bp CATCTCAGTCCCAGTTTAAATGCCTCCATTTTCGTATaGAGCAATGATCAAGCTCCAGCTCCTTTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: HLSPSLNASIFV*SNDQAPAPLPS
Trigger: GCTGGGCAAAGGAGCTGGAGCTTGATCATTGCTGCATACGAAAATGGAGGCATTTAAACTGGGACTGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS GCA 72 bp AACAGCTCACAAGCCTCTGGTCTCCCTATCCTCTTATaGTCCGAGAGGCCTTCAATCCTAAAGAAGCCAAAT +
Preference number: 6 (lower is better)
Translates to: NSSQASGLPILL*SERPSILKKPN
Trigger: ATTTGGCTTCTTTAGGATTGAAGGCCTCTCGGAGCATAAGAGGATAGGGAGACCAGAGGCTTGTGAGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498700.5
CDS CCA 72 bp CATGACTACATTACTGGACTCTATACAGAGCTCCATTaGCCCCAACAGAGCATCCTAGTTCTCCAGCCTGAA +
Preference number: 6 (lower is better)
Translates to: HDYITGLYTELH*PQQSILVLQPE
Trigger: TTCAGGCTGGAGAACTAGGATGCTCTGTTGGGGCCAATGGAGCTCTGTATAGAGTCCAGTAATGTAGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS GCA 72 bp GAATCACCTGACAGCTGTCGTCATCGTGCAAAGTCCTaGCATGAAATTCTTCCATATCAGCACCTAGGTATG +
Preference number: 6 (lower is better)
Translates to: ESPDSCRHRAKS*HEILPYQHLGM
Trigger: CATACCTAGGTGCTGATATGGAAGAATTTCATGGCAGGACTTTGCACGATGACGACAGCTGTCAGGTGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
ENST00000450014.1
ENST00000478353.1
ENST00000492178.1
ENST00000498700.5
ENST00000639284.1
CDS GCA 72 bp TTACCCAACCTCTCCTGTACATGCGAAATAACAGCCTaGTTTGGCTTCAACACTGACCACTGCAATTACCCA +
Preference number: 6 (lower is better)
Translates to: LPNLSCTCEITA*FGFNTDHCNYP
Trigger: TGGGTAATTGCAGTGGTCAGTGTTGAAGCCAAAGCAGGCTGTTATTTCGCATGTACAGGAGAGGTTGGGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478353.1
CDS GCA 72 bp GAATCACCTGACAGCTGTCGTCATCGTGCAAAGTCCTaGCATGAAATTCTTCCATATCAGCACCTAGGTACA +
Preference number: 6 (lower is better)
Translates to: ESPDSCRHRAKS*HEILPYQHLGT
Trigger: TGTACCTAGGTGCTGATATGGAAGAATTTCATGGCAGGACTTTGCACGATGACGACAGCTGTCAGGTGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491834.5
CDS CAA 72 bp GATCAACTGCAGTTTCCTTTAGTGTCGTGCATGTTGTaGAGTTTTCCCAGGACTCCAGATTTGTGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: DQLQFPLVSCML*SFPRTPDLWAV
Trigger: CACTGCCCACAAATCTGGAGTCCTGGGAAAACTCAACAACATGCACGACACTAAAGGAAACTGCAGTTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS GCA 72 bp CTGACCCAGTCCATAGGGATTATGGCACCTATAAATTaGACTAGCACTTGCTATCTACATACCTTACTTGGC +
Preference number: 6 (lower is better)
Translates to: LTQSIGIMAPIN*TSTCYLHTLLG
Trigger: GCCAAGTAAGGTATGTAGATAGCAAGTGCTAGTGCAATTTATAGGTGCCATAATCCCTATGGACTGGGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS CAA 72 bp AGTCCTGGAACTAGACTCACTTCTTTTAAAGGCACCTaGAAGAACAGGGAAAGGAGTCCTTACACAGGAAGT +
Preference number: 6 (lower is better)
Translates to: SPGTRLTSFKGT*KNRERSPYTGS
Trigger: ACTTCCTGTGTAAGGACTCCTTTCCCTGTTCTTCAAGGTGCCTTTAAAAGAAGTGAGTCTAGTTCCAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS TCA 72 bp TACATGCGAAATAACAGCCTGCTTTGGCTTCAACACTaGCCACTGCAATTACCCATGAGAGGGAATGTATTA +
Preference number: 6 (lower is better)
Translates to: YMRNNSLLWLQH*PLQLPMRGNVL
Trigger: TAATACATTCCCTCTCATGGGTAATTGCAGTGGTCAGTGTTGAAGCCAAAGCAGGCTGTTATTTCGCATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478353.1
CDS CCA 72 bp ATCATTTTTAAAAGATGCTGCAGCCTCATCACTCTCTaGAGATGGGAGATGAGGTTGGAACTCAAGCTTCTA +
Preference number: 6 (lower is better)
Translates to: IIFKRCCSLITL*RWEMRLELKLL
Trigger: TAGAAGCTTGAGTTCCAACCTCATCTCCCATCTCCAGAGAGTGATGAGGCTGCAGCATCTTTTAAAAATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498700.5
CDS CAA 72 bp AATCCTGTTCTTCTCGATAGGCATATATCTCTGCTGTaGTTCCAAACTGTGCTTCCCTTTCCTGTACATTGC +
Preference number: 6 (lower is better)
Translates to: NPVLLDRHISLL*FQTVLPFPVHC
Trigger: GCAATGTACAGGAAAGGGAAGCACAGTTTGGAACAACAGCAGAGATATATGCCTATCGAGAAGAACAGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
ENST00000450014.1
ENST00000480249.5
ENST00000491834.5
ENST00000492178.1
ENST00000498700.5
ENST00000639284.1
CDS CAA 90 bp ATTAAGGCAAGTCCTGGAACTAGACTCACTTCTTTTAAAGGCACCTaGAAGAACAGGGAAAGGAGTCCTTACACAGGAAGTGTTTTTGGA +
Preference number: 6 (lower is better)
Translates to: IKASPGTRLTSFKGT*KNRERSPYTGSVFG
Trigger: TCCAAAAACACTTCCTGTGTAAGGACTCCTTTCCCTGTTCTTCAAGGTGCCTTTAAAAGAAGTGAGTCTAGTTCCAGGACTTGCCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS TCA 72 bp GAAGGAAATATCTGGCACTTATTGAGGGATTCTAATTaGACTGCAGACATGGTTGAAGGCAACACACATTCG +
Preference number: 6 (lower is better)
Translates to: EGNIWHLLRDSN*TADMVEGNTHS
Trigger: CGAATGTGTGTTGCCTTCAACCATGTCTGCAGTTCAATTAGAATCCCTCAATAAGTGCCAGATATTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
ENST00000450014.1
ENST00000480249.5
ENST00000482844.5
ENST00000491834.5
ENST00000639284.1
CDS TCA 72 bp CGAAGTCGCTGGATAGCACTGCCAATTTTAAGGAGCTaGATTCTCAATACATCATCAATAGGAAGACAAGCA +
Preference number: 6 (lower is better)
Translates to: RSRWIALPILRS*ILNTSSIGRQA
Trigger: TGCTTGTCTTCCTATTGATGATGTATTGAGAATTCAGCTCCTTAAAATTGGCAGTGCTATCCAGCGACTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
ENST00000459840.5
ENST00000488263.5
ENST00000491834.5
ENST00000498442.1
ENST00000639284.1
CDS CCA 72 bp AACTTCCATCCAATATGGCTTGCACAGATCTTACACTaGGCAACAGTCCAGGCATACCTGAATATTTCATTT +
Preference number: 6 (lower is better)
Translates to: NFHPIWLAQILH*ATVQAYLNISF
Trigger: AAATGAAATATTCAGGTATGCCTGGACTGTTGCCCAGTGTAAGATCTGTGCAAGCCATATTGGATGGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424814.5
CDS CAA 72 bp ATAAGGAATACAGCCAGCGAGGCCATGAAGTTAGATTaGCACAATGAAACTTTCTCTTCTGGTATTTCTGCC +
Preference number: 6 (lower is better)
Translates to: IRNTASEAMKLD*HNETFSSGISA
Trigger: GGCAGAAATACCAGAAGAGAAAGTTTCATTGTGCAAATCTAACTTCATGGCCTCGCTGGCTGTATTCCTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
ENST00000480249.5
ENST00000482844.5
ENST00000491834.5
ENST00000639284.1
CDS CAA 72 bp CATTATATCCATTTCATAGGTCCTTGGAGAAGTAATTaGCTCCAGGCCCACAGAGTAAGTGACAGAAATCAG +
Preference number: 6 (lower is better)
Translates to: HYIHFIGPWRSN*LQAHRVSDRNQ
Trigger: CTGATTTCTGTCACTTACTCTGTGGGCCTGGAGCAAATTACTTCTCCAAGGACCTATGAAATGGATATAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS CAA 90 bp ACGAAAGTTATCATACAAATGTGGAAGGAAGGACCCACTAAACCCTaGAATATAAGCAAAGAGGTAGGTGGCAAAGCAGCCTTTTTAGAA +
Preference number: 6 (lower is better)
Translates to: TKVIIQMWKEGPTKP*NISKEVGGKAAFLE
Trigger: TTCTAAAAAGGCTGCTTTGCCACCTACCTCTTTGCTTATATTCAAGGGTTTAGTGGGTCCTTCCTTCCACATTTGTATGATAACTTTCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491834.5
CDS CAA 90 bp AGGCCTTCAATCCTAAAGAAGCCAAATCCCAAACAACACTTCCCTTaGGATTTACATGATTGTTCTCAAACCTGGAGAGACATTAGAATC +
Preference number: 6 (lower is better)
Translates to: RPSILKKPNPKQHFP*DLHDCSQTWRDIRI
Trigger: GATTCTAATGTCTCTCCAGGTTTGAGAACAATCATGTAAATCCAAAGGGAAGTGTTGTTTGGGATTTGGCTTCTTTAGGATTGAAGGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498700.5
CDS GCA 72 bp GAAATTTTAACTTTTCAGAGGGACAAGGTAACTCATTaGAACTGGTTTAGAGTTCAGCCTACAGAGAGGTAC +
Preference number: 6 (lower is better)
Translates to: EILTFQRDKVTH*NWFRVQPTERY
Trigger: GTACCTCTCTGTAGGCTGAACTCTAAACCAGTTGCAATGAGTTACCTTGTCCCTCTGAAAAGTTAAAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491834.5
CDS CCA 72 bp TACAATAGCTACCATTATATCCATTTCATAGGTCCTTaGAGAAGTAATTTGCTCCAGGCCCACAGAGTAAGT +
Preference number: 6 (lower is better)
Translates to: YNSYHYIHFIGP*RSNLLQAHRVS
Trigger: ACTTACTCTGTGGGCCTGGAGCAAATTACTTCTCCAAGGACCTATGAAATGGATATAATGGTAGCTATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS CAA 90 bp CACAAAACAATGAGTTTGTTTGTAAGATCCCAATTGAAATCTGAATaGCATGACTACATTACTGGACTCTATACAGAGCTCCATTGGCCC +
Preference number: 6 (lower is better)
Translates to: HKTMSLFVRSQLKSE*HDYITGLYTELHWP
Trigger: GGGCCAATGGAGCTCTGTATAGAGTCCAGTAATGTAGTCATGCAATTCAGATTTCAATTGGGATCTTACAAACAAACTCATTGTTTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS CAA 90 bp GATAACTTTATCTCTATCACATCTGTTTACAAGCAAAGTATTACTTaGTCTGGACTTATTTCATCTTCAGTGTCTGGGATCGTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: DNFISITSVYKQSIT*SGLISSSVSGIVGN
Trigger: GTTGCCCACGATCCCAGACACTGAAGATGAAATAAGTCCAGACAAAGTAATACTTTGCTTGTAAACAGATGTGATAGAGATAAAGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000231948.9
ENST00000424814.5
ENST00000432408.6
ENST00000488263.5
ENST00000491834.5
CDS TCA 72 bp CATGCAAAAACTCATATATTGTGTCTTTGTAATTGCTaGAAAGCTGCTAAAGAGCGGAGATCAACTGCAGTT +
Preference number: 6 (lower is better)
Translates to: HAKTHILCLCNC*KAAKERRSTAV
Trigger: AACTGCAGTTGATCTCCGCTCTTTAGCAGCTTTTCAGCAATTACAAAGACACAATATATGAGTTTTTGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5
CDS CCA 72 bp AGGACTACCAATAAAACGAAAGTTATCATACAAATGTaGAAGGAAGGACCCACTAAACCCTTGAATATAAGC +
Preference number: 6 (lower is better)
Translates to: RTTNKTKVIIQM*KEGPTKPLNIS
Trigger: GCTTATATTCAAGGGTTTAGTGGGTCCTTCCTTCCACATTTGTATGATAACTTTCGTTTTATTGGTAGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491834.5
CDS CAA 72 bp ATGAGTTTGTTTGTAAGATCCCAATTGAAATCTGAATaGCATGACTACATTACTGGACTCTATACAGAGCTC +
Preference number: 6 (lower is better)
Translates to: MSLFVRSQLKSE*HDYITGLYTEL
Trigger: GAGCTCTGTATAGAGTCCAGTAATGTAGTCATGCAATTCAGATTTCAATTGGGATCTTACAAACAAACTCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000488263.5
ENST00000491834.5