RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000148204

Ensembl transcript IDs: ENST00000359999.7, ENST00000373631.8, ENST00000460253.1

Found 555 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGTACACCTaGCAAGGCGGAACCCCGAGGGTGGGATGGAGAAGTCCGCAGCCT +
Preference number: 1 (lower is better)
Translates to: HTVNPRVPSHAQPYT*QGGTPRVGWRSPQP
Trigger: AGGCTGCGGACTTCTCCATCCCACCCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR CCA 90 bp CTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTaGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCC +
Preference number: 1 (lower is better)
Translates to: LLTSQSHVPVPHVVT*LPTLDWTPMPLGPA
Trigger: GGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR GCA 90 bp ATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACTGCTaGACATGCTCAGTGAGGCTTGGCGGCCATCCTGGCACATGGCTC +
Preference number: 1 (lower is better)
Translates to: MSPREPPLCLRGCHC*TCSVRLGGHPGTWL
Trigger: GAGCCATGTGCCAGGATGGCCGCCAAGCCTCACTGAGCATGTGCAGCAGTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR GCA 90 bp TCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTaGCACTGCTGCACATGCTCAGTGAGGCTTGGCGGCCATCCTGGC +
Preference number: 1 (lower is better)
Translates to: SLEMSPREPPLCLRG*HCCTCSVRLGGHPG
Trigger: GCCAGGATGGCCGCCAAGCCTCACTGAGCATGTGCAGCAGTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR TCA 90 bp TCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGGAGTaGGCTCACCAGGCTGCTAGGAAGGACCGGAGCTGGAGAACCAGA +
Preference number: 1 (lower is better)
Translates to: SRRVCVEAASHQGKE*AHQAARKDRSWRTR
Trigger: TCTGGTTCTCCAGCTCCGGTCCTTCCTAGCAGCCTGGTGAGCTCACTCCTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 90 bp GAAAGGTGGTCCCACCTCCTACAGGATAAGGACCAAGCAAGCCCCTaGGCCTGGTGTTCAGGGCCCTCTCTATCCCAGCGTCTGCTGACT +
Preference number: 1 (lower is better)
Translates to: ERWSHLLQDKDQASP*AWCSGPSLSQRLLT
Trigger: AGTCAGCAGACGCTGGGATAGAGAGGGCCCTGAACACCAGGCTCAGGGGCTTGCTTGGTCCTTATCCTGTAGGAGGTGGGACCACCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 90 bp CTCACACACACACTCCTCCAGATACACACACTCCTGAACACACTGTaGACCCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAG +
Preference number: 1 (lower is better)
Translates to: LTHTLLQIHTLLNTL*THVCPPTHSRTPAK
Trigger: CTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGTATCTGGAGGAGTGTGTGTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR TCA 90 bp GTTCCCTCGCATGACTGGCTCTGGCTTCTGGCAGACAGACCTGCCTaGAGGGACATTTGTTCTAGGAGCCAGAAGCCCACTCAGCCTCTG +
Preference number: 1 (lower is better)
Translates to: VPSHDWLWLLADRPA*RDICSRSQKPTQPL
Trigger: CAGAGGCTGAGTGGGCTTCTGGCTCCTAGAACAAATGTCCCTTCAGGCAGGTCTGTCTGCCAGAAGCCAGAGCCAGTCATGCGAGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 90 bp CCAGGTACACACTCACACACACACTCCTCCAGATACACACACTCCTaGACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGTA +
Preference number: 1 (lower is better)
Translates to: PGTHSHTHSSRYTHS*THCEPTCALPRTAV
Trigger: TACGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGTATCTGGAGGAGTGTGTGTGTGAGTGTGTACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR TCA 90 bp CGGCAGTTGAAGACTTCCAGATTCTTTCCCCACTGTCGTCCTCTCTaGTCCTCACAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: RQLKTSRFFPHCRPL*SSQQPCEVGSGCLP
Trigger: GGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTGTGAGGATCAGAGAGGACGACAGTGGGGAAAGAATCTGGAAGTCTTCAACTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR GCA 90 bp CAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTaGAGACTAACACAGGCCCAGGTACACACTCACACACACACTCCT +
Preference number: 1 (lower is better)
Translates to: QTRPGAMSGHTHTSI*RLTQAQVHTHTHTP
Trigger: AGGAGTGTGTGTGTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR TCA 90 bp CATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTaGAGACTTCCAGATTCTTTCCCCACTGTCGTCCTCTCTGATCCT +
Preference number: 1 (lower is better)
Translates to: HPRRTPRRSFPSDGS*RLPDSFPTVVLSDP
Trigger: AGGATCAGAGAGGACGACAGTGGGGAAAGAATCTGGAAGTCTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 90 bp CAGGAAATTGTGAGCATTTCGACCCGAGCTCTCATTTCCTATTTGTaGAGGGTCAGACACAGTCTACCCAGGGGTGTCTGGGGGACAAGG +
Preference number: 1 (lower is better)
Translates to: QEIVSISTRALISYL*RVRHSLPRGVWGTR
Trigger: CCTTGTCCCCCAGACACCCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACAATTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR TCA 90 bp CCCGACCATTTAAGAAAACAACCATCTGAGACACGCAGGAAATTGTaGGCATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCA +
Preference number: 1 (lower is better)
Translates to: PDHLRKQPSETRRKL*AFRPELSFPICEGS
Trigger: TGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACAATTTCCTGCGTGTCTCAGATGGTTGTTTTCTTAAATGGTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR CCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTACCCCGAGGGTGGGATaGAGAAGTCCGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPTPRVG*RSPQPL
Trigger: GAGAGGCTGCGGACTTCTCCATCCCACCCTCGGGGT...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR-3UTR TCA 90 bp CTCTGCAGGCCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGAGGCCTCTGTTTCCCTaGGTTGCTCCCCTCGTCCTC +
Preference number: 2 (lower is better)
Translates to: LCRPSPDSEAAPVFTEPLRPLFP*VAPLVL
Trigger: GAGGACGAGGGGAGCAACTCAGGGAAACAGAGGCCT...CAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGGCCTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAGGGCGGGTGGGTCTGTaGTTCCCTCGCATGACTGGC +
Preference number: 2 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAGRVGL*FPRMTG
Trigger: GCCAGTCATGCGAGGGAACCACAGACCCACCCGCCC...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGGCAGCCCCTCCTCTaGTCCCTCGGGCTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGRQPLL*SLGLLR
Trigger: CCGGAGCAGCCCGAGGGAGCAGAGGAGGGGCTGCCT...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR TCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACTGGGAGGTCACAGTGTaGTGGGCATCGCCGGGGAAG +
Preference number: 2 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNWEVTV*WASPGK
Trigger: CTTCCCCGGCGATGCCCATCACACTGTGACCTCCCA...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp TCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCCGGCAGAGGCAGAGGCTaGCAGCCAAGGGGACACTTC +
Preference number: 2 (lower is better)
Translates to: SADFPVPCPSPPRCHVAPGRGRG*QPRGHF
Trigger: GAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCC...GGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACAGGCCCTCAGGCAGGTaGCCTTCAGGGATGGGAGGT +
Preference number: 2 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNRPSGR*PSGMGG
Trigger: ACCTCCCATCCCTGAAGGGCACCTGCCTGAGGGCCT...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGGCACAGCCGTACACCTaGCAAGGCGGAACCCCGAGG +
Preference number: 2 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRAQPYT*QGGTPR
Trigger: CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGC...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCGCGGAACCCCGAGGGTaGGATGGAGAAGTCCGCAGC +
Preference number: 2 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGAEPRG*DGEVRS
Trigger: GCTGCGGACTTCTCCATCCCACCCTCGGGGTTCCGC...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACGGCCATCCTGGCACATaGCTCTTCCTGGGTCAACCG +
Preference number: 2 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHGHPGT*LFLGQP
Trigger: CGGTTGACCCAGGAAGAGCCATGTGCCAGGATGGCC...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR CCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACCAATGTCCCGAGCCCTaGAAGCAGCTTCCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNQCPEP*KQLPWV
Trigger: GACCCAAGGAAGCTGCTTCCAGGGCTCGGGACATTG...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAACCCCGAGGGTGGGATaGAGAAGTCCGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTTPRVG*RSPQPL
Trigger: GAGAGGCTGCGGACTTCTCCATCCCACCCTCGGGGT...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR-3UTR CCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGTGGGCAACCCCGGCCTaGCCTCCTGGAGAACATGCA +
Preference number: 2 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRWATPA*PPGEHA
Trigger: TGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCA...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAACTGGCTCTGGCTTCTaGCAGACAGACCTGCCTGAA +
Preference number: 2 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSATGSGF*QTDLPE
Trigger: TTCAGGCAGGTCTGTCTGCCAGAAGCCAGAGCCAGT...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR TCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACGGGAAGCAGGAAGGATaGAAGGGCACATCTCCAGGT +
Preference number: 2 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNGKQEG*KGTSPG
Trigger: ACCTGGAGATGTGCCCTTTCATCCTTCCTGCTTCCC...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACTCTGTTTCCCTGAGTTaGTCCCCTCGTCCTCCATCC +
Preference number: 2 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHSVSLS*SPRPPS
Trigger: GGATGGAGGACGAGGGGAGCAACTCAGGGAAACAGA...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR CAA 90 bp GGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAGCAGCTTCCTaGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: GDTSVAMSRALEAAS*GLQVETIQDLQVLV
Trigger: CACCAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR-3UTR TCA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGCTCCTGAACACACTGTaGACCCACGTGTGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKLLNTL*THVCPP
Trigger: GGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAG...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACGCCTTGGGCCGCCCCTaGCCTAGGACTGTAATGGTT +
Preference number: 2 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHALGRP*PRTVMV
Trigger: AACCATTACAGTCCTAGGGCAGGGGCGGCCCAAGGC...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACACGGCAGACACGCCCTaGAGCCATGTCAGGACACAC +
Preference number: 2 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHTADTP*SHVRTH
Trigger: GTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGT...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGGCAGCCGCCACCTCCTaGGATCAGCTACACCCATCA +
Preference number: 2 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKAAATS*DQLHPS
Trigger: TGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGC...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR TCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCCACTGTCGTCCTCTCTaGTCCTCACAACAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGHCRPL*SSQQPC
Trigger: ACAGGGCTGTTGTGAGGATCAGAGAGGACGACAGTG...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACATCTGTTTCCCTGAGTTaGTCCCCTCGTCCTCCATCC +
Preference number: 2 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTSVSLS*SPRPPS
Trigger: GGATGGAGGACGAGGGGAGCAACTCAGGGAAACAGA...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR-3UTR CCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGAGGAAGGACCGGAGCTaGAGAACCAGAGGTGGTCAG +
Preference number: 2 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKRKDRS*RTRGGQ
Trigger: CTGACCACCTCTGGTTCTCCAGCTCCGGTCCTTCCT...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTCAATGTCCCGAGCCCTaGAAGCAGCTTCCTTGGGTC +
Preference number: 2 (lower is better)
Translates to: KHGRHALEPCQDTLTLASQCPEP*KQLPWV
Trigger: GACCCAAGGAAGCTGCTTCCAGGGCTCGGGACATTG...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR-3UTR TCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCACTCCTGAACACACTGTaGACCCACGTGTGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: PPGISYTHHSHRHTVNTALLNTL*THVCPP
Trigger: GGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAG...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR-3UTR TCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGGCAGACAGACCTGCCTaGAGGGACATTTGTTCTAGG +
Preference number: 2 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKADRPA*RDICSR
Trigger: CCTAGAACAAATGTCCCTTCAGGCAGGTCTGTCTGC...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCGCCTCCTGGAGAACATaGAGCCTTGGGCCGCCCCTG +
Preference number: 2 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTASWRT*SLGPPL
Trigger: CAGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGC...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR GCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGTCTGGCAGACAGACCTaGCTGAAGGGACATTTGTTC +
Preference number: 2 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRSGRQT*LKGHLF
Trigger: GAACAAATGTCCCTTCAGGCAGGTCTGTCTGCCAGA...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGGAGGTAGGCAGTGGGTaGCTTCCCCCTTTGACAAAT +
Preference number: 2 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKEVGSG*LPPLTN
Trigger: ATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTC...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR GCA 90 bp CGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCAGGGAGAGGCTGCCACTGCTaGACATGCTCAGTGAGGCTT +
Preference number: 2 (lower is better)
Translates to: RPELSFPICEGSDTVYPGRGCHC*TCSVRL
Trigger: AAGCCTCACTGAGCATGTGCAGCAGTGGCAGCCTCT...CCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR TCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCAGCCCCCTCTATGTCTaGGAGGCTGCCACTGCTGCA +
Preference number: 2 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTSPLYV*EAATAA
Trigger: TGCAGCAGTGGCAGCCTCTCAGACATAGAGGGGGCT...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR GCA 90 bp CAAGTTAAAGTATGGCCCGACCATTTAAGAAAACAACCATCTGAGACACGCAGGGGCAGAGGCAGAGGCTaGCAGCCAAGGGGACACTTC +
Preference number: 2 (lower is better)
Translates to: QVKVWPDHLRKQPSETRRGRGRG*QPRGHF
Trigger: GAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCC...CCTGCGTGTCTCAGATGGTTGTTTTCTTAAATGGTCGGGCCATACTTTAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR CCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCATGCTCAGTGAGGCTTaGCGGCCATCCTGGCACATG +
Preference number: 2 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTMLSEA*RPSWHM
Trigger: CATGTGCCAGGATGGCCGCCAAGCCTCACTGAGCAT...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR TCA 90 bp TGTGAGCATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTTCCTGGGTCAACCGTaGCCTGTCTGGCTCAGGAAT +
Preference number: 2 (lower is better)
Translates to: CEHFDPSSHFLFVKGQTQFLGQP*PVWLRN
Trigger: ATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAA...CTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR CCA 72 bp CTCGGGCTGCTCCGGCTGAGGGGGCGGGTGGGTCTGTaGTTCCCTCGCATGACTGGCTCTGGCTTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: LGLLRLRGRVGL*FPRMTGSGFWQ
Trigger: CTGCCAGAAGCCAGAGCCAGTCATGCGAGGGAACCACAGACCCACCCGCCCCCTCAGCCGGAGCAGCCCGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR GCA 72 bp AACCCACGTGTGCCCTCCCACGCACAGCCGTACACCTaGCAAGGCGGAACCCCGAGGGTGGGATGGAGAAGT +
Preference number: 3 (lower is better)
Translates to: NPRVPSHAQPYT*QGGTPRVGWRS
Trigger: ACTTCTCCATCCCACCCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR GCA 72 bp TGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTaGCCTAGGACTGTAATGGTTGACCCCATGGCGCAG +
Preference number: 3 (lower is better)
Translates to: WPPGEHAALGRP*PRTVMVDPMAQ
Trigger: CTGCGCCATGGGGTCAACCATTACAGTCCTAGGGCAGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR GCA 72 bp AGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACTGCTaGACATGCTCAGTGAGGCTTGGCGGCCATCCTGGC +
Preference number: 3 (lower is better)
Translates to: REPPLCLRGCHC*TCSVRLGGHPG
Trigger: GCCAGGATGGCCGCCAAGCCTCACTGAGCATGTGCAGCAGTGGCAGCCTCTCAGACATAGAGGGGGCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR CAA 90 bp TCGCCGGGGAAGGGGCTGGGAGCAAGCAGCAGAGTCTCCTCTGAGTCGGCCTCTAGGGCAGGAGAAGGGTaGCTCTGTCATCCTCATCCC +
Preference number: 3 (lower is better)
Translates to: SPGKGLGASSRVSSESASRAGEG*LCHPHP
Trigger: GGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT...AGAGGCCGACTCAGAGGAGACTCTGCTGCTTGCTCCCAGCCCCTTCCCCGGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CAA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCACTCTGTTTCCCTGAGTaGCTCCCCTCGTCCTCCATC +
Preference number: 3 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSALCFPE*LPSSSI
Trigger: GATGGAGGACGAGGGGAGCAACTCAGGGAAACAGAG...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 72 bp CCTGGTGTTCAGGGCCCTCTCTATCCCAGCGTCTGCTaGCTTCCCAGTCCCATGTCCCAGTCCCCCACGTTG +
Preference number: 3 (lower is better)
Translates to: PGVQGPLYPSVC*LPSPMSQSPTL
Trigger: CAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACGCTGGGATAGAGAGGGCCCTGAACACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR GCA 72 bp ATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTaGCACTGCTGCACATGCTCAGTGAGGCTTGGCGGC +
Preference number: 3 (lower is better)
Translates to: MSPREPPLCLRG*HCCTCSVRLGG
Trigger: GCCGCCAAGCCTCACTGAGCATGTGCAGCAGTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR CCA 72 bp TCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTaGCTCCCCACATTGGACTGGACACCCATGCCTCTG +
Preference number: 3 (lower is better)
Translates to: SQSHVPVPHVVT*LPTLDWTPMPL
Trigger: CAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 72 bp GTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGGAGTaGGCTCACCAGGCTGCTAGGAAGGACCGGAGCTGG +
Preference number: 3 (lower is better)
Translates to: VCVEAASHQGKE*AHQAARKDRSW
Trigger: CCAGCTCCGGTCCTTCCTAGCAGCCTGGTGAGCTCACTCCTTCCCCTGATGACTGGCTGCCTCTACACAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 72 bp TCCCACCTCCTACAGGATAAGGACCAAGCAAGCCCCTaGGCCTGGTGTTCAGGGCCCTCTCTATCCCAGCGT +
Preference number: 3 (lower is better)
Translates to: SHLLQDKDQASP*AWCSGPSLSQR
Trigger: ACGCTGGGATAGAGAGGGCCCTGAACACCAGGCTCAGGGGCTTGCTTGGTCCTTATCCTGTAGGAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CAA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGCTCTGTTTCCCTGAGTaGCTCCCCTCGTCCTCCATC +
Preference number: 3 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWLCFPE*LPSSSI
Trigger: GATGGAGGACGAGGGGAGCAACTCAGGGAAACAGAG...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR-3UTR CAA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGGGGTGCCTTCCCCCTTaGACAAATGACCACAGCAGG +
Preference number: 3 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKGCLPP*TNDHSR
Trigger: CCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACCC...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 72 bp CACTCACACACACACTCCTCCAGATACACACACTCCTaGACACACTGTGAACCCACGTGTGCCCTCCCACGC +
Preference number: 3 (lower is better)
Translates to: HSHTHSSRYTHS*THCEPTCALPR
Trigger: GCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGTATCTGGAGGAGTGTGTGTGTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR TCA 72 bp CATGACTGGCTCTGGCTTCTGGCAGACAGACCTGCCTaGAGGGACATTTGTTCTAGGAGCCAGAAGCCCACT +
Preference number: 3 (lower is better)
Translates to: HDWLWLLADRPA*RDICSRSQKPT
Trigger: AGTGGGCTTCTGGCTCCTAGAACAAATGTCCCTTCAGGCAGGTCTGTCTGCCAGAAGCCAGAGCCAGTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR-3UTR CAA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACCTGGAAGCAGCTTCCTaGGGTCTCCAGGTAGAAACC +
Preference number: 3 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHLEAAS*GLQVET
Trigger: GGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCCAG...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
3UTR-3UTR CAA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCCCCATCAGACGGCAGTaGAAGACTTCCAGATTCTTT +
Preference number: 3 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGPIRRQ*KTSRFF
Trigger: AAAGAATCTGGAAGTCTTCAACTGCCGTCTGATGGG...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR TCA 72 bp GTGAGCATTTCGACCCGAGCTCTCATTTCCTATTTGTaGAGGGTCAGACACAGTCTACCCAGGGGTGTCTGG +
Preference number: 3 (lower is better)
Translates to: VSISTRALISYL*RVRHSLPRGVW
Trigger: CCAGACACCCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
3UTR TCA 72 bp TTAAGAAAACAACCATCTGAGACACGCAGGAAATTGTaGGCATTTCGACCCGAGCTCTCATTTCCTATTTGT +
Preference number: 3 (lower is better)
Translates to: LRKQPSETRRKL*AFRPELSFPIC
Trigger: ACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACAATTTCCTGCGTGTCTCAGATGGTTGTTTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGCCGAGCAAGCGCCCTaGCGACGCGTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRAEQAP*RRVVPA
Trigger: AGCGGGCACAACGCGTCGTCAGGGCGCTTGCTCGGC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGGCCAAGACGCGAAGTaGTCTCGGGCGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRGQDAK*SRAPGA
Trigger: GGCCCCTGGCGCCCGAGAGCACTTCGCGTCTTGGCC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTCCTGCCTGGCCCAGCTaGCTCCTTCGGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPPAWPS*LLRSLL
Trigger: GAGCAGGCTCCGAAGGAGGCAGCTGGGCCAGGCAGG...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTGGTGGGAGACAGGGCTaGCCGGGACACCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPGGRQG*PGHHSC
Trigger: GCAGCTGTGGTGTCCCGGCCAGCCCTGTCTCCCACC...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTCTCACACGTGGCAGGTaGGAGACAGGGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPLTRGR*ETGLAG
Trigger: CCCGGCCAGCCCTGTCTCCCACCTGCCACGTGTGAG...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCCGTCGGGGTGCGTGTaGCAGCGGCCACGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQPSGCV*QRPRAQ
Trigger: CTGCGCCCGTGGCCGCTGTCACACGCACCCCGACGG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTGGCTGCCAGGATCCCTaGAAGGAGGCCCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPGCQDP*KEAQEE
Trigger: CTCCTCCTGGGCCTCCTTTCAGGGATCCTGGCAGCC...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTGACCCTCCAGGCAGCTaGAGTTGGCAGCGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPDPPGS*SWQRES
Trigger: GCTCTCCCGCTGCCAACTGCAGCTGCCTGGAGGGTC...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTCCAGGCAGCTGCAGTTaGCAGCGGGAGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPPGSCS*QRESHP
Trigger: AGGGTGGCTCTCCCGCTGCCAACTGCAGCTGCCTGG...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTCTGCCACAGTGTCACTaGAGGTTCCGCCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPLPQCH*RFRRAG
Trigger: GCCTGCACGGCGGAACCTGCAGTGACACTGTGGCAG...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGTGAGGTTCCAGGACTaGCTGCCGCCGAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRVRFQD*LPPSSL
Trigger: CAGCGAGCTCGGCGGCAGGCAGTCCTGGAACCTCAC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGCGGAACCCCGAGGGTaGGATGGAGAAGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRAEPRG*DGEVRS
Trigger: GCTGCGGACTTCTCCATCCCACCCTCGGGGTTCCGC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTCTCGCTGGGCTGGCTTaGGTTATCCAGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPLAGLA*VIQWQR
Trigger: CCTCTGCCACTGGATAACTCAAGCCAGCCCAGCGAG...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACGCGCAGGGGGCGGAGTaGCAGGGGTCGACGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHAQGAE*QGSTWA
Trigger: AGCCCACGTCGACCCCTGTCACTCCGCCCCCTGCGC...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGCTGCACATGCTCAGTaGGGCTTGGCGGCCATCCTG +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRAAHAQ*GLAAIL
Trigger: CAGGATGGCCGCCAAGCCTCACTGAGCATGTGCAGC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACCCAGCTGGCAACGGGTaGCCCCGTAGCCTGGCGCGC +
Preference number: 4 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNPAGNG*PRSLAR
Trigger: GCGCGCCAGGCTACGGGGGCACCCGTTGCCAGCTGG...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCGGCAGGTGGCCCCATaGTGGCACGGCCGGGATGCA +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQRQVAP*WHGRDA
Trigger: TGCATCCCGGCCGTGCCACCATGGGGCCACCTGCCG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGGACCTCCTCACACGTaGCAGGTGGGAGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRGPPHT*QVGDRA
Trigger: AGCCCTGTCTCCCACCTGCCACGTGTGAGGAGGTCC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CTCTGCAGGCCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGGTTGAGGCATGGCCGTaGGGCACACTCGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: LCRPSPDSEAAPVFTEPLVEAWP*GTLVHL
Trigger: GAGGTGGACGAGTGTGCCTCACGGCCATGCCTCAAC...CAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGGCCTGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp CTCTGCAGGCCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGGCTGGCACTGATGCCTaGATGGGGCTCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: LCRPSPDSEAAPVFTEPLAGTDA*MGLPAI
Trigger: GATGGCTGGGAGCCCCATTCAGGCATCAGTGCCAGC...CAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGGCCTGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGCGCAGGGGGCGGAGTaGCAGGGGTCGACGTGGGCT +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPAQGAE*QGSTWA
Trigger: AGCCCACGTCGACCCCTGTCACTCCGCCCCCTGCGC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp TCGCCGGGGAAGGGGCTGGGAGCAAGCAGCAGAGTCTCCTCTGAGTCGGCCTCTTGCGCTCTGCTCGGCTaGTGTGAGAACGGGAGGGCG +
Preference number: 4 (lower is better)
Translates to: SPGKGLGASSRVSSESASCALLG*CENGRA
Trigger: CGCCCTCCCGTTCTCACAGCAGCCGAGCAGAGCGCA...AGAGGCCGACTCAGAGGAGACTCTGCTGCTTGCTCCCAGCCCCTTCCCCGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAGCACGTGCCCCCATGTaGGCACGGCTGGCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAARAPM*ARLALA
Trigger: TGCCAGAGCCAGCCGTGCGCACATGGGGGCACGTGC...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGCAGCGGGCAGTGTGGTaGGAAACCTCAGTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRQRAVW*ETSVPD
Trigger: GTCTGGCACTGAGGTTTCGCACCACACTGCCCGCTG...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGGCAGAGGCCGGCACTaGTCTCGGCGCTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRGRGRH*SRRSQP
Trigger: GGGCTGTGAGCGCCGAGAGCAGTGCCGGCCTCTGCC...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCACCGGGACACCACAGCTaGTGGGCACACGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAPGHHS*WAHVGP
Trigger: GGGGCCTACGTGTGCCCAGCAGCTGTGGTGTCCCGG...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGCCCTGCGTAGCCATCTaGGCAGTGACACTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRPCVAI*AVTLEA
Trigger: GGCTTCCAGTGTCACTGCCCAGATGGCTACGCAGGG...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACGCCAGCGGGCAGGTGTaGCCCTGGCAGCCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHASGQV*PWQPVS
Trigger: GCTCACTGGCTGCCAGGGCCACACCTGCCCGCTGGC...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAGTCGCGTCCCCCAGCTaGGCAGAGGAGATCCCGGCA +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAVASPS*AEEIPA
Trigger: TGCCGGGATCTCCTCTGCCCAGCTGGGGGACGCGAC...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTAAAGGAGGCAGAGCTTaGGGCGCCTCCCAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPKGGRA*GASQAK
Trigger: TTTGGCTTGGGAGGCGCCCCAAGCTCTGCCTCCTTT...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGGAAAGAAGGGGAGGTaGCAGCCATCGAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRGKKGR*QPSSRR
Trigger: CCTGCGACTCGATGGCTGCCACCTCCCCTTCTTTCC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CGTCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCGCAGCGCCACCGGGGTaGCGGCACCATCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: RLLTSQSHVPVPHVVTWLAAPPG*RHHPAT
Trigger: TGTGGCTGGATGGTGCCGCCACCCCGGTGGCGCTGC...GAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCAGCGCCACCGGGGTaGCGGCACCATCCAGCCACA +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRAAPPG*RHHPAT
Trigger: TGTGGCTGGATGGTGCCGCCACCCCGGTGGCGCTGC...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CGTCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCGGCAGTGGCCTCCGTTaGGGCATGGCCGTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: RLLTSQSHVPVPHVVTWLGSGLR*GMAVRH
Trigger: GTGCCTCACGGCCATGCCTCAACGGAGGCCACTGCC...GAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp TCGCCGGGGAAGGGGCTGGGAGCAAGCAGCAGAGTCTCCTCTGAGTCGGCCTCTGGTCAGGCCCGAAGCTaGGCATCACCAGGTGACGGA +
Preference number: 4 (lower is better)
Translates to: SPGKGLGASSRVSSESASGQARS*ASPGDG
Trigger: TCCGTCACCTGGTGATGCTCAGCTTCGGGCCTGACC...AGAGGCCGACTCAGAGGAGACTCTGCTGCTTGCTCCCAGCCCCTTCCCCGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTCACTGTCGTCCTCTCTaGTCCTCACAACAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPHCRPL*SSQQPC
Trigger: ACAGGGCTGTTGTGAGGATCAGAGAGGACGACAGTG...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAAGCGATCGGCCAGGTTaGGGCAGGTGGCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSASDRPG*GRWPHG
Trigger: ACCATGGGGCCACCTGCCGCAACCTGGCCGATCGCT...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCCCCGCTCGCAGTGCGTaGCCTCGTAGCCGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGPARSA*PRSRCP
Trigger: CGGGCACCGGCTACGAGGGCACGCACTGCGAGCGGG...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCATGCTGCCCCAGGTCCTaGAGCTGGTCAGGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSACCPRS*SWSGPK
Trigger: CTTCGGGCCTGACCAGCTGCAGGACCTGGGGCAGCA...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAAGCCTCCCACCCACGTaGACGTGCTGCCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRSLPPT*TCCPRS
Trigger: GGACCTGGGGCAGCACGTGCACGTGGGTGGGAGGCT...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACAGCCTCCCACCCACGTaGACGTGCTGCCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHSLPPT*TCCPRS
Trigger: GGACCTGGGGCAGCACGTGCACGTGGGTGGGAGGCT...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGCCAGACGCACGCGGTaGCAGGCACCATCGGCCACG +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPARRTR*QAPSAT
Trigger: CGTGGCCGATGGTGCCTGGCACCGCGTGCGTCTGGC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCAGCTGCCCGGCAGGTaGCCCCATTCAAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQQLPGR*PHSSRG
Trigger: ACCCCTGCTTGAATGGGGGCACCTGCCGGGCAGCTG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CTCTGCAGGCCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGGCCTTGGGCCGCCCCTaGCCTAGGACTGTAATGGTT +
Preference number: 4 (lower is better)
Translates to: LCRPSPDSEAAPVFTEPLALGRP*PRTVMV
Trigger: AACCATTACAGTCCTAGGGCAGGGGCGGCCCAAGGC...CAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGGCCTGCAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGCCGTGGTGGCATGGCTaGGTGGCACAGCCCCGGGGC +
Preference number: 4 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRPWWHG*VAQPRG
Trigger: GCCCCGGGGCTGTGCCACCCAGCCATGCCACCACGG...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCACAGAGCGCCGTGGTaGCATGGCTGGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQHRAPW*HGWVAQ
Trigger: CTGTGCCACCCAGCCATGCCACCACGGCGCTCTGTG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAGGTGCCCCCGTAGCCTaGCGCGCACACACAGCGGAA +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEGAPVA*RAHTAE
Trigger: TTCCGCTGTGTGTGCGCGCCAGGCTACGGGGGCACC...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCCGCGCACGGCTGGCTCTaGCACTCGTCGAGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SADFPVPCPSPPRCHVAPAHGWL*HSSRSS
Trigger: GCTGGACCTCGACGAGTGCCAGAGCCAGCCGTGCGC...GGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCACCATGTGCGCACGGCTaGCTCTGGCACTCGTCGAGG +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAPCAHG*LWHSSR
Trigger: CCTCGACGAGTGCCAGAGCCAGCCGTGCGCACATGG...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGGCCCACCCCAGGGCTaGCTGTCGGCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPGPPQG*LSAARS
Trigger: GCTCCTTGCTGCCGACAGCCAGCCCTGGGGTGGGCC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAGGACACCACAGCTGCTaGGCACACGTAGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAGHHSC*AHVGPV
Trigger: CACGGGGCCTACGTGTGCCCAGCAGCTGTGGTGTCC...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGGGGAAGGAGGTGCCTaGGCAACCCCGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPGEGGA*ATPAWP
Trigger: AGGCCAGGCCGGGGTTGCCCAGGCACCTCCTTCCCC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGCTCCCCACATTGGACTaGACACCCATGCCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRLPTLD*TPMPLG
Trigger: TCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAG...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGGTGCAGGCAGGGCGCTaGGGCGCACTCGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRVQAGR*GALVHL
Trigger: GAGGTGGACGAGTGCGCCTCAGCGCCCTGCCTGCAC...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGGCCCTGGCAGCCAGTaGGCTGCACAGAACAGTCGC +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRGPGSQ*AAQNSR
Trigger: GCGACTGTTCTGTGCAGCTCACTGGCTGCCAGGGCC...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAGCCACCAGCTGGCACTaGTGCCTGAATGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEATSWH*CLNGAP
Trigger: GGGAGCCCCATTCAGGCATCAGTGCCAGCTGGTGGC...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGAAGGAAAGACACTGTaGGGTTGGGACCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPREGKTL*GWDLAA
Trigger: AGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCTTC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAAGACGCAGCCCGCAGTaGGGTTCCAGGACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALERRSPQ*GSRTAC
Trigger: GCAGGCAGTCCTGGAACCTCACTGCGGGCTGCGTCT...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGCCGTCGGGGTGCGTGTaGCAGCGGCCACGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: EAASLGLQVETIQDLQVLPSGCV*QRPRAQ
Trigger: CTGCGCCCGTGGCCGCTGTCACACGCACCCCGACGG...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGAGGCACGAGCCCCCGTaGAGGCAGGGCGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKRHEPP*RQGAEA
Trigger: CGCCTCAGCGCCCTGCCTGCACGGGGGCTCGTGCCT...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAGGTGCGAAACCTCAGTaGCAGACCCAGGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEGAKPQ*QTQGAT
Trigger: GGTGGCCCCCTGGGTCTGGCACTGAGGTTTCGCACC...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACGTCCTGGAGGCAGCCTaGAAAGGTCGCGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHVLEAA*KGRVPQ
Trigger: CTGGGGGACGCGACCTTTGCAGGCTGCCTCCAGGAC...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGGCAGAGGCCGGCACTaGTCTCGGCGCTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWGRGRH*SRRSQP
Trigger: GGGCTGTGAGCGCCGAGAGCAGTGCCGGCCTCTGCC...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCACTACAGCAGGACTaGCCGGCACCTCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRALQQD*PAPQPG
Trigger: TCCGGGCTGAGGTGCCGGGCAGTCCTGCTGTAGTGC...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAATGCTGCCCCAGGTCCTaGAGCTGGTCAGGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALECCPRS*SWSGPK
Trigger: CTTCGGGCCTGACCAGCTGCAGGACCTGGGGCAGCA...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CTCTGCAGGCCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGAACAGGGGTCAGGACTaGACATGTCCTCGGAGACGC +
Preference number: 4 (lower is better)
Translates to: LCRPSPDSEAAPVFTEPLNRGQD*TCPRRR
Trigger: GCGTCTCCGAGGACATGTGCAGTCCTGACCCCTGTT...CAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGGCCTGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACCTGACGACGCGTTGTaGCCGCTGAACGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTPDDAL*PLNAAG
Trigger: CCCCGCCGCGTTCAGCGGGCACAACGCGTCGTCAGG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACCGCCAGCGAGCCATTaGGCACCGCCAGCCACACGC +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTPPASH*APPATR
Trigger: GCGTGTGGCTGGCGGTGCGCAATGGCTCGCTGGCGG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGCCGCCAGCGAGCCATTaGGCACCGCCAGCCACACGC +
Preference number: 4 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWPPASH*APPATR
Trigger: GCGTGTGGCTGGCGGTGCGCAATGGCTCGCTGGCGG...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACTCTCAGCCAGCAGGATaGGCACAGCACCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNSQPAG*AQHPGP
Trigger: AGGGCCCGGGTGCTGTGCGCATCCTGCTGGCTGAGA...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGGGCCAAGACGCGAAGTaGTCTCGGGCGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRGQDAK*SRAPGA
Trigger: GGCCCCTGGCGCCCGAGAGCACTTCGCGTCTTGGCC...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACGGCAGGCACCGTCGTaGAGACAGGGCGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTRQAPS*RQGEGA
Trigger: TGCGCCCTCGCCCTGTCTGCACGACGGTGCCTGCCG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CGTCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCAGACACCCCTCCAGCTaGCCGGCAGGTGCCCCCATT +
Preference number: 4 (lower is better)
Translates to: RLLTSQSHVPVPHVVTWLRHPSS*PAGAPI
Trigger: AATGGGGGCACCTGCCGGGCAGCTGGAGGGGTGTCT...GAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACGCCTCCTGGAGAACATaGAGCCTTGGGCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHASWRT*SLGPPL
Trigger: CAGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGC...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTGAGGTAGGCAGTGGGTaGCTTCCCCCTTTGACAAAT +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPEVGSG*LPPLTN
Trigger: ATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTC...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAAGGCCCTCAGGCAGGTaGCCTTCAGGGATGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSARPSGR*PSGMGG
Trigger: ACCTCCCATCCCTGAAGGGCACCTGCCTGAGGGCCT...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGCCTGGCCAGCGCCATaGCAGCCCGCTCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTAWPAP*QPALRS
Trigger: AGAGCGCAGAGCGGGCTGCCATGGCGCTGGCCAGGC...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACCTGAGGCACAGGCACTaGGGGGCTCTGAAGGCACCG +
Preference number: 4 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNLRHRH*GALKAP
Trigger: CGGTGCCTTCAGAGCCCCCCAGTGCCTGTGCCTCAG...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAACCACTCTCGGTAGCCTaGCACTCGGTCCCTGGAGCG +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEPLSVA*HSVPGA
Trigger: CGCTCCAGGGACCGAGTGCCAGGCTACCGAGAGTGG...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACGGTGGCATGGCTGGGTaGCACAGCCCCGGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADGGMAG*HSPGAP
Trigger: TGGAGCCCCGGGGCTGTGCCACCCAGCCATGCCACC...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCCCATCGGCCCCCATGCTaGCAGGGGCTCGATGCACAC +
Preference number: 4 (lower is better)
Translates to: SADFPVPCPSPPRCHVAPHRPPC*QGLDAH
Trigger: GTGTGCATCGAGCCCCTGCCAGCATGGGGGCCGATG...GGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGGCAGGTCCTGGCAGTaGCCTCCGTTGAGGCATGGC +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRGRSWQ*PPLRHG
Trigger: GCCATGCCTCAACGGAGGCCACTGCCAGGACCTGCC...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGGAGTTGCCGAAGCCGTaGAAGCCAGGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQELPKP*KPGPQD
Trigger: GTCCTGTGGCCCTGGCTTCCACGGCTTCGGCAACTC...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCACGTGGGACCTCTATaGGGCCGGGCACAGTCGCAA +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQHVGPL*GRAQSQ
Trigger: TTGCGACTGTGCCCGGCCCCATAGAGGTCCCACGTG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAACCAGGCAGCTGCAGTTaGCAGCGGGAGAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEPGSCS*QRESHP
Trigger: AGGGTGGCTCTCCCGCTGCCAACTGCAGCTGCCTGG...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGGCCACCTCCAGCAGTaGGAATGGCAGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPGHLQQ*EWQRQG
Trigger: CCCCTGCCGCTGCCATTCCCACTGCTGGAGGTGGCC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACGCGGAACCCCGAGGGTaGGATGGAGAAGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHAEPRG*DGEVRS
Trigger: GCTGCGGACTTCTCCATCCCACCCTCGGGGTTCCGC...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CGTCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCCCGGCCTGGCCTCCTaGAGAACATGCAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RLLTSQSHVPVPHVVTWLPGLAS*RTCSLG
Trigger: CCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGG...GAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCGGGGAAGGAGGTGCCTaGGCAACCCCGGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGGEGGA*ATPAWP
Trigger: AGGCCAGGCCGGGGTTGCCCAGGCACCTCCTTCCCC...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CTCTGCAGGCCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGGTTCCCTCGCATGACTaGCTCTGGCTTCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LCRPSPDSEAAPVFTEPLVPSHD*LWLLAD
Trigger: GTCTGCCAGAAGCCAGAGCCAGTCATGCGAGGGAAC...CAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGGCCTGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCCCGCCGGGGAAGGGGCTaGGAGCAAGCAGCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: SADFPVPCPSPPRCHVAPRRGRG*EQAAES
Trigger: AGACTCTGCTGCTTGCTCCCAGCCCCTTCCCCGGCG...GGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp CCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACAGCAGGCGCACCGGAACCCGTTaGCCAGGTCGTGGCACGTGC +
Preference number: 4 (lower is better)
Translates to: PCEVGSGCLPPLTNDHSRRTGTR*PGRGTC
Trigger: GCACGTGCCACGACCTGGTCAACGGGTTCCGGTGCG...CCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGGGAGAGTGGGGACCTaGCACCTCTGGCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRGRVGT*HLWPAR
Trigger: TCTTGCTGGCCAGAGGTGTCAGGTCCCCACTCTCCC...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACCAGGTCGTGGCACGTaGCCCCATGTGCGCACGGCT +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTPGRGT*PHVRTA
Trigger: AGCCGTGCGCACATGGGGGCACGTGCCACGACCTGG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACTGCCCTCGTAGCCGGTaGCCGCGCAGTCGCACCGGA +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHCPRSR*PRSRTG
Trigger: TCCGGTGCGACTGCGCGGGCACCGGCTACGAGGGCA...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGAGGCAGGACGCGTTGTaGTCGCAGGGCGCCGATGCG +
Preference number: 4 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRRQDAL*SQGADA
Trigger: CGCATCGGCGCCCTGCGAGCACAACGCGTCCTGCCT...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGACTGGCAGGGGCTCGATaGACACTCGTCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRLAGAR*TLVLVH
Trigger: GTGGACGAGGACGAGTGTGCATCGAGCCCCTGCCAG...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGCACTACAGCAGGACTaGCCGGCACCTCAGCCCGGA +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPALQQD*PAPQPG
Trigger: TCCGGGCTGAGGTGCCGGGCAGTCCTGCTGTAGTGC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCCCCACGTGCACGTGCTaGCCCAGGTCCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGPTCTC*PRSCSW
Trigger: CCAGCTGCAGGACCTGGGGCAGCACGTGCACGTGGG...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCCCACCCACGTGCACGTaGTGCCCCAGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICPPTCT*CPRSCS
Trigger: GCTGCAGGACCTGGGGCAGCACGTGCACGTGGGTGG...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCCCTCGGAGTCGCGCGTaGGAAAGGCCAGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGPRSRA*ERPATG
Trigger: GCCTGTCGCTGGCCTTTCGCACGCGCGACTCCGAGG...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTACTCACACTAGCATCTaGAGACTAACACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPTHTSI*RLTQAQ
Trigger: CTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGT...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAAGCCCCCGGCTCCATTaGCATGCCCTCCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALESPRLH*HALQTG
Trigger: ACCTGTCTGGAGGGCATGGCAATGGAGCCGGGGGCT...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCGTCCAGCTCGCAGCGTaGGCCCTGGAAACCCGGCAC +
Preference number: 4 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGVQLAA*ALETRH
Trigger: GTGCCGGGTTTCCAGGGCCCACGCTGCGAGCTGGAC...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAAAGCCAGGAGGGCAGTaGCACAGGAAACCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAKPGGQ*HRKPAA
Trigger: TGCTGCGGGTTTCCTGTGCCACTGCCCTCCTGGCTT...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACGCCAGCGGGCAGGTGTaGCCCTGGCAGCCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHASGQV*PWQPVS
Trigger: GCTCACTGGCTGCCAGGGCCACACCTGCCCGCTGGC...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CTCTGCAGGCCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGGCAGGGCAGGTACAGTaGAAGTCATTCCAGGTGACG +
Preference number: 4 (lower is better)
Translates to: LCRPSPDSEAAPVFTEPLAGQVQ*KSFQVT
Trigger: CGTCACCTGGAATGACTTCCACTGTACCTGCCCTGC...CAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGGCCTGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAGGACCTCCTCACACGTaGCAGGTGGGAGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEGPPHT*QVGDRA
Trigger: AGCCCTGTCTCCCACCTGCCACGTGTGAGGAGGTCC...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGACCCTCGCGGAACGTaGCCTCCGCCACACACACAA +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRDPRGT*PPPHTQ
Trigger: TTGTGTGTGTGGCGGAGGCCACGTTCCGCGAGGGTC...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGGGAAGCCCAGGTCACTaGCCAGGCCGCGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKGSPGH*PGRAAP
Trigger: TGGCGCTGCGCGGCCTGGCCAGTGACCTGGGCTTCC...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGCCACTTCACAGAACTaGCCGGAGAATCTGGCATTG +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRATSQN*PENLAL
Trigger: CAATGCCAGATTCTCCGGCCAGTTCTGTGAAGTGGC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCACCTCCTGCTGGCTTaGGCTGTAGGTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQHLLLA*AVGALR
Trigger: TCTGAGGGCACCTACAGCCCAAGCCAGCAGGAGGTG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CGTCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCACCCCGAGGGTGGGATaGAGAAGTCCGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RLLTSQSHVPVPHVVTWLTPRVG*RSPQPL
Trigger: GAGAGGCTGCGGACTTCTCCATCCCACCCTCGGGGT...GAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGATGGGCAACCCCGGCCTaGCCTCCTGGAGAACATGCA +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRWATPA*PPGEHA
Trigger: TGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCA...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCGCAGAGCTCCCTGCCTaGCCCAGCTGCCTCCTTCGG +
Preference number: 4 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICAELPA*PSCLLR
Trigger: CCGAAGGAGGCAGCTGGGCCAGGCAGGGAGCTCTGC...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGTCTGCTCGGCTGCTGTaGGAACGGGAGGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKSARLL*EREGGL
Trigger: CAGGCCGCCCTCCCGTTCTCACAGCAGCCGAGCAGA...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCCACCAGCTGGCACTaGTGCCTGAATGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWATSWH*CLNGAP
Trigger: GGGAGCCCCATTCAGGCATCAGTGCCAGCTGGTGGC...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp TCGCCGGGGAAGGGGCTGGGAGCAAGCAGCAGAGTCTCCTCTGAGTCGGCCTCTGAAGGAAAGACACTGTaGGGTTGGGACCTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGKGLGASSRVSSESASEGKTL*GWDLAA
Trigger: AGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCTTC...AGAGGCCGACTCAGAGGAGACTCTGCTGCTTGCTCCCAGCCCCTTCCCCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACCCTCCGGTGGCACCTTaGGGACACTGTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHPPVAP*GHCPSP
Trigger: TGGAGATGGACAGTGTCCTCAAGGTGCCACCGGAGG...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAAGGCCTCTGTTTCCCTaGGTTGCTCCCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALERPLFP*VAPLVL
Trigger: GAGGACGAGGGGAGCAACTCAGGGAAACAGAGGCCT...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCGCCCTCCAGACAGGTTaGGAGTGGTGGGCGGGCACT +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGALQTG*EWWAGT
Trigger: AGTGCCCGCCCACCACTCTCAACCTGTCTGGAGGGC...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGCATGGCAGCCCGCTCTaGGCTCTGCTCGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRHGSPL*ALLGCC
Trigger: ACAGCAGCCGAGCAGAGCGCAGAGCGGGCTGCCATG...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGCTCGCAGGGCGCCGATaGGCACTCCAGCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: EAASLGLQVETIQDLQVLLAGRR*ALQHLP
Trigger: CGGGAGGTGCTGGAGTGCGCATCGGCGCCCTGCGAG...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAAGGCATCGGCCCCCATaGTGGCAGGGGCTCGATGCA +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTRHRPP*WQGLDA
Trigger: TGCATCGAGCCCCTGCCAGCATGGGGGCCGATGCCT...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACTGCAGGTTCCGCCGTaGAGGCAGGGATCCGACAGG +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTLQVPP*RQGSDR
Trigger: CCTGTCGGATCCCTGCCTGCACGGCGGAACCTGCAG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGATGGCAGCCAGTGAGCTaGACAGAACAGTCGCGCCCA +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRWQPVS*TEQSRP
Trigger: TGGGCGCGACTGTTCTGTGCAGCTCACTGGCTGCCA...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAATGGCAGCCAGTGAGCTaGACAGAACAGTCGCGCCCA +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEWQPVS*TEQSRP
Trigger: TGGGCGCGACTGTTCTGTGCAGCTCACTGGCTGCCA...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACGGTGCGAAACCTCAGTaGCAGACCCAGGGGGCCACC +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADGAKPQ*QTQGAT
Trigger: GGTGGCCCCCTGGGTCTGGCACTGAGGTTTCGCACC...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACAGCAGGGGCAGGCAGCGGAGTTaGCGAAGCCGTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: PCEVGSGCLPPLTNDHSRGRQRS*RSRGSQ
Trigger: CTGGCTTCCACGGCTTCGGCAACTCCGCTGCCTGCC...CCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGGCAGGCAGCGGAGTTaGCGAAGCCGTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWGRQRS*RSRGSQ
Trigger: CTGGCTTCCACGGCTTCGGCAACTCCGCTGCCTGCC...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTCCTGGAGGCAGCCTaGAAAGGTCGCGTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTVLEAA*KGRVPQ
Trigger: CTGGGGGACGCGACCTTTGCAGGCTGCCTCCAGGAC...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACTCTCAGCCAGCAGGATaGGCACAGCACCCGGGCCCT +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADSQPAG*AQHPGP
Trigger: AGGGCCCGGGTGCTGTGCGCATCCTGCTGGCTGAGA...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACATGGGACAGGCAACCTaGAGCGCGGGCCCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHMGQAT*SAGPRS
Trigger: GCTTCGGGGGCCCGCGCTGCAGGTTGCCTGTCCCAT...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCCAGCTGCCCGGCAGGTaGCCCCATTCAAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGQLPGR*PHSSRG
Trigger: ACCCCTGCTTGAATGGGGGCACCTGCCGGGCAGCTG...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGAGGCAGGCACAGGCTaGAGGTACGGCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWEAGTG*RYGHLQ
Trigger: CTGGAGGTGGCCGTACCTGCAGCCTGTGCCTGCCTC...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACGCACAGCCGTACACCTaGCAAGGCGGAACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADAQPYT*QGGTPR
Trigger: CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGC...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACCTCACATGTCGGCCCTaGCAGGAGCCACAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADLTCRP*QEPQVA
Trigger: GGCCACCTGTGGCTCCTGGCAGGGCCGACATGTGAG...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGAAGCCGGTGGGATCTaGACCCTGGGGCACACACAG +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPEAGGI*TLGHTQ
Trigger: CTGTGTGTGCCCCAGGGTCCAGATCCCACCGGCTTC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGCAGCGGAAGCCGGTaGGATCTGGACCCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICSSGSR*DLDPGA
Trigger: TGCCCCAGGGTCCAGATCCCACCGGCTTCCGCTGCT...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGGGCAGGTGTGGCCCTaGCAGCCAGTGAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTGQVWP*QPVSCT
Trigger: TGTGCAGCTCACTGGCTGCCAGGGCCACACCTGCCC...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACTGGTGTCATTGCGAGTaGCCAAGGTCCCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHWCHCE*PRSQRA
Trigger: TGCCCGCTGGGACCTTGGCCACTCGCAATGACACCA...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCATCCAGGGTCGCTAGATaGAGCACAACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSASRVAR*STTSTW
Trigger: CCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGA...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGTCCAGGGTCGCTAGATaGAGCACAACCTCCACCTGG +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQSRVAR*STTSTW
Trigger: CCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGA...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGTCAGGCAGCAGGAGGTaGCCATCCACACGCACGTCC +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPSGSRR*PSTRTS
Trigger: GGACGTGCGTGTGGATGGCCACCTCCTGCTGCCTGA...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGACACAGGACCCTCCGTaGACACAAGGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPTQDPP*TQGRGR
Trigger: CCGGCCTCTGCCTTGTGTCCACGGAGGGTCCTGTGT...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAAAAGGAGGCAGAGCTTaGGGCGCCTCCCAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAKGGRA*GASQAK
Trigger: TTTGGCTTGGGAGGCGCCCCAAGCTCTGCCTCCTTT...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCTCGAGTCGCAGGTCCTaGAGGCAGCCTCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGSSRRS*RQPRKG
Trigger: GCCCTTCCGAGGCTGCCTCCAGGACCTGCGACTCGA...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CGTCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCGGAAAGAAGGGGAGGTaGCAGCCATCGAGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: RLLTSQSHVPVPHVVTWLGKKGR*QPSSRR
Trigger: CCTGCGACTCGATGGCTGCCACCTCCCCTTCTTTCC...GAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAACCGAGCTCGCTGGGCTaGCTTGAGTTATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEPSSLG*LELSSG
Trigger: GCCACTGGATAACTCAAGCCAGCCCAGCGAGCTCGG...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGATGCCGCCGAGCTCGCTaGGCTGGCTTGAGTTATCCA +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRCRRAR*AGLSYP
Trigger: TGGATAACTCAAGCCAGCCCAGCGAGCTCGGCGGCA...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGGACACCACAGCTGCTaGGCACACGTAGGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTGHHSC*AHVGPV
Trigger: CACGGGGCCTACGTGTGCCCAGCAGCTGTGGTGTCC...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGACTTCACAGGGGAGAGTaGGGACCTGACACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRLHRGE*GPDTSG
Trigger: GCCAGAGGTGTCAGGTCCCCACTCTCCCCTGTGAAG...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACGGCCACCTCCAGCAGTaGGAATGGCAGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHGHLQQ*EWQRQG
Trigger: CCCCTGCCGCTGCCATTCCCACTGCTGGAGGTGGCC...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAACGGCAGACACGCCCTaGAGCCATGTCAGGACACAC +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALETADTP*SHVRTH
Trigger: GTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGT...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CGTCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCGCAGCCGCCACCTCCTaGGATCAGCTACACCCATCA +
Preference number: 4 (lower is better)
Translates to: RLLTSQSHVPVPHVVTWLAAATS*DQLHPS
Trigger: TGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGC...GAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGCCCGGCCTGGCCTCCTaGAGAACATGCAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWPGLAS*RTCSLG
Trigger: CCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGG...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCGGGCGGGTGGGTCTGTaGTTCCCTCGCATGACTGGC +
Preference number: 4 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGGRVGL*FPRMTG
Trigger: GCCAGTCATGCGAGGGAACCACAGACCCACCCGCCC...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACCTCCAGAGTGTGGCCTaGAGTGTGGCTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNLQSVA*SVAATN
Trigger: ATTGGTGGCAGCCACACTTCAGGCCACACTCTGGAG...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAATGCCATCGAGGCAGGTaGCATTCAGGCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALECHRGR*HSGCTP
Trigger: AGGAGTGCAGCCTGAATGTCACCTGCCTCGATGGCA...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCGGGAGAGTGGGGACCTaGCACCTCTGGCCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGGRVGT*HLWPAR
Trigger: TCTTGCTGGCCAGAGGTGTCAGGTCCCCACTCTCCC...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACCCAGGCTGGCCTAGATaGGTCTCTCCTCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADPGWPR*VSPPVA
Trigger: TGCCACCGGAGGAGAGACTCATCTAGGCCAGCCTGG...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACGCCGGGTCAGAGCGCTaGAGGCATCGGCCCCCATGC +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHAGSER*RHRPPC
Trigger: GCATGGGGGCCGATGCCTGCAGCGCTCTGACCCGGC...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CGTCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCAGCGGACTCCCGAGTaGGGAGAAGGAAAGACACTG +
Preference number: 4 (lower is better)
Translates to: RLLTSQSHVPVPHVVTWLQRTPE*GEGKTL
Trigger: CAGTGTCTTTCCTTCTCCGCACTCGGGAGTCCGCTG...GAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTCCACCCACGTGCACGTaGTGCCCCAGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASPPTCT*CPRSCS
Trigger: GCTGCAGGACCTGGGGCAGCACGTGCACGTGGGTGG...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGGTTCCAGGACTGCCTaGCGCCGAGCTCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASGSRTA*RRARWA
Trigger: AGCCCAGCGAGCTCGGCGGCAGGCAGTCCTGGAACC...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACCCTGACGACGCGTTGTaGCCGCTGAACGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHPDDAL*PLNAAG
Trigger: CCCCGCCGCGTTCAGCGGGCACAACGCGTCGTCAGG...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTATGGGACAGGCAACCTaGAGCGCGGGCCCCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASMGQAT*SAGPRS
Trigger: GCTTCGGGGGCCCGCGCTGCAGGTTGCCTGTCCCAT...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGGAGGCAGGCACAGGCTaGAGGTACGGCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKEAGTG*RYGHLQ
Trigger: CTGGAGGTGGCCGTACCTGCAGCCTGTGCCTGCCTC...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGGGCTTGGGCTGTAGGTaGCCTCAGACTGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKGLGCR*PQTGGA
Trigger: AGCGCCGCCAGTCTGAGGGCACCTACAGCCCAAGCC...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGGCAGAGGCAGAGGCTaGCAGCCAAGGGGACACTTC +
Preference number: 4 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWGRGRG*QPRGHF
Trigger: GAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCC...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGGGGCAGGAGAAGGGTTaGTCTGTCATCCTCATCCCA +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQGQEKG*SVILIP
Trigger: TGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCC...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGAGCCCCGGGGCTCCATaGGCCCACAGGTATAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKSPGAP*AHRYSH
Trigger: GTGGCTATACCTGTGGGCCCATGGAGCCCCGGGGCT...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGTCCATGGGTACCAGGTaGGCAGTGGCAGACGTAACT +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQSMGTR*AVADVT
Trigger: AGTTACGTCTGCCACTGCCCACCTGGTACCCATGGA...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGTGGTGTCATTGCGAGTaGCCAAGGTCCCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPWCHCE*PRSQRA
Trigger: TGCCCGCTGGGACCTTGGCCACTCGCAATGACACCA...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACGAGTTGCCGAAGCCGTaGAAGCCAGGGCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADELPKP*KPGPQD
Trigger: GTCCTGTGGCCCTGGCTTCCACGGCTTCGGCAACTC...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGTCCACACGCACGTCCTaGAGGCAGCCTGCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPSTRTS*RQPAKV
Trigger: GACCTTTGCAGGCTGCCTCCAGGACGTGCGTGTGGA...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACTCAGGCAGCAGGAGGTaGCCATCCACACGCACGTCC +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADSGSRR*PSTRTS
Trigger: GGACGTGCGTGTGGATGGCCACCTCCTGCTGCCTGA...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCAGCTGCGGAGTCATTaGCAAACTGGAGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQQLRSH*QTGATG
Trigger: GCCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGCCGAGCTCGCTGGGCTaGCTTGAGTTATCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPPSSLG*LELSSG
Trigger: GCCACTGGATAACTCAAGCCAGCCCAGCGAGCTCGG...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGCTCACACGTGGCAGGTaGGAGACAGGGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: EAASLGLQVETIQDLQVLLTRGR*ETGLAG
Trigger: CCCGGCCAGCCCTGTCTCCCACCTGCCACGTGTGAG...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGCTGCACTCCTTGGATaGGACAGGCAACCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPAALLG*DRQPAA
Trigger: CGCTGCAGGTTGCCTGTCCCATCCAAGGAGTGCAGC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGCTTCACAGGGGAGAGTaGGGACCTGACACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPLHRGE*GPDTSG
Trigger: GCCAGAGGTGTCAGGTCCCCACTCTCCCCTGTGAAG...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCACCCCGAGGGTGGGATaGAGAAGTCCGCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICTPRVG*RSPQPL
Trigger: GAGAGGCTGCGGACTTCTCCATCCCACCCTCGGGGT...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGCAGCCGCCACCTCCTaGGATCAGCTACACCCATCA +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPAAATS*DQLHPS
Trigger: TGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAAGGAAGGACCGGAGCTaGAGAACCAGAGGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALERKDRS*RTRGGQ
Trigger: CTGACCACCTCTGGTTCTCCAGCTCCGGTCCTTCCT...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR CAA 72 bp CAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTaGACAAATGACCACAGCAGGGTGGGAAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QPCEVGSGCLPP*TNDHSRVGSSR
Trigger: CCTGGAGCTTCCCACCCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGGGCCCTGGCAGCCAGTaGGCTGCACAGAACAGTCGC +
Preference number: 4 (lower is better)
Translates to: EAASLGLQVETIQDLQVLGPGSQ*AAQNSR
Trigger: GCGACTGTTCTGTGCAGCTCACTGGCTGCCAGGGCC...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGGGCAAGTCCCACCATTaGAACAGGGGTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPGKSHH*NRGQDC
Trigger: GCAGTCCTGACCCCTGTTTCAATGGTGGGACTTGCC...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGGCTGCCAGGATCCCTaGAAGGAGGCCCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASGCQDP*KEAQEE
Trigger: CTCCTCCTGGGCCTCCTTTCAGGGATCCTGGCAGCC...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACCTCCTGAACACACTGTaGACCCACGTGTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADLLNTL*THVCPP
Trigger: GGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAG...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCCCGCTCTGCGCTCTaGTCGGCTGCTGTGAGAACG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASARSAL*SAAVRT
Trigger: CGTTCTCACAGCAGCCGAGCAGAGCGCAGAGCGGGC...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTCTGCAGGTTCCGCCGTaGAGGCAGGGATCCGACAGG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASLQVPP*RQGSDR
Trigger: CCTGTCGGATCCCTGCCTGCACGGCGGAACCTGCAG...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGGGCAGCCCTCATaGCAGAGCCGTAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASAGQPS*QSRSSR
Trigger: CCTGGAGCTACGGCTCTGGCATGAGGGCTGCCCTGC...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGCAGGGCAGCCCTCATaGCAGAGCCGTAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAAGQPS*QSRSSR
Trigger: CCTGGAGCTACGGCTCTGGCATGAGGGCTGCCCTGC...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACGGTTCCAGGACTGCCTaGCGCCGAGCTCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHGSRTA*RRARWA
Trigger: AGCCCAGCGAGCTCGGCGGCAGGCAGTCCTGGAACC...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCAGGGCCGGGACACCACAGCTaGTGGGCACACGTAGGCCCC +
Preference number: 4 (lower is better)
Translates to: RPELSFPICEGSDTVYPGPGHHS*WAHVGP
Trigger: GGGGCCTACGTGTGCCCAGCAGCTGTGGTGTCCCGG...CCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACCCTCGGAGTCGCGCGTaGGAAAGGCCAGCGACAGGC +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHPRSRA*ERPATG
Trigger: GCCTGTCGCTGGCCTTTCGCACGCGCGACTCCGAGG...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAGCCAGACGCACGCGGTaGCAGGCACCATCGGCCACG +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTAARRTR*QAPSAT
Trigger: CGTGGCCGATGGTGCCTGGCACCGCGTGCGTCTGGC...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCACGGCAGGCACCGTCGTaGAGACAGGGCGAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTARQAPS*RQGEGA
Trigger: TGCGCCCTCGCCCTGTCTGCACGACGGTGCCTGCCG...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGACCCTCCAGGCAGCTaGAGTTGGCAGCGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGADPPGS*SWQRES
Trigger: GCTCTCCCGCTGCCAACTGCAGCTGCCTGGAGGGTC...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGGCTTGGGCTGTAGGTaGCCTCAGACTGGCGGCGCT +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAGLGCR*PQTGGA
Trigger: AGCGCCGCCAGTCTGAGGGCACCTACAGCCCAAGCC...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACGGCAGAGGCAGAGGCTaGCAGCCAAGGGGACACTTC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHGRGRG*QPRGHF
Trigger: GAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCC...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACATGCCACTGCTGCACATaGTCAGTGAGGCTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTCHCCT*SVRLGG
Trigger: GCCGCCAAGCCTCACTGAGCATGTGCAGCAGTGGCA...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAAGCGCCGTGGTGGCATaGCTGGGTGGCACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTASAVVA*LGGTAP
Trigger: CGGGGCTGTGCCACCCAGCCATGCCACCACGGCGCT...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGTGGGATCTGGACCCTaGGGCACACACAGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASVGSGP*GTHRAP
Trigger: CGGCGCTCTGTGTGTGCCCCAGGGTCCAGATCCCAC...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGCTCGCCGCTGTAGCCTaGCCAACAGAGGCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKLAAVA*PTEAAE
Trigger: TTCCGCTGCCTCTGTTGGCCAGGCTACAGCGGCGAG...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGGAAACCCGCAGCATaGCGGAAGCTGAAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGRKPAA*RKLKAP
Trigger: TGGCGCCTTCAGCTTCCGCCATGCTGCGGGTTTCCT...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGCCCACCCCAGGTCTCTaGGCACCTGCAGATATAGCC +
Preference number: 4 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRPTPGL*APADIA
Trigger: GGCTATATCTGCAGGTGCCCAGAGACCTGGGGTGGG...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCCCCACCCCAGGTCTCTaGGCACCTGCAGATATAGCC +
Preference number: 4 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICPTPGL*APADIA
Trigger: GGCTATATCTGCAGGTGCCCAGAGACCTGGGGTGGG...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAATCCATGGGTACCAGGTaGGCAGTGGCAGACGTAACT +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALESMGTR*AVADVT
Trigger: AGTTACGTCTGCCACTGCCCACCTGGTACCCATGGA...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCTGGCACATGGCTCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGTCCACACGCACGTCCTaGAGGCAGCCTGCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: SWHMALPGSTVTCLAQEWSTRTS*RQPAKV
Trigger: GACCTTTGCAGGCTGCCTCCAGGACGTGCGTGTGGA...CCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGTCTCATCAGCGCACGTaGGACCTCTATGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKSHQRT*DLYGAG
Trigger: CCCGGCCCCATAGAGGTCCCACGTGCGCTGATGAGA...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTTCGAGTCGCAGGTCCTaGAGGCAGCCTCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGASSRRS*RQPRKG
Trigger: GCCCTTCCGAGGCTGCCTCCAGGACCTGCGACTCGA...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACGGTGGGAGACAGGGCTaGCCGGGACACCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHGGRQG*PGHHSC
Trigger: GCAGCTGTGGTGTCCCGGCCAGCCCTGTCTCCCACC...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAGGAAGCCCAGGTCACTaGCCAGGCCGCGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTAGSPGH*PGRAAP
Trigger: TGGCGCTGCGCGGCCTGGCCAGTGACCTGGGCTTCC...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCGCTGCACTCCTTGGATaGGACAGGCAACCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICAALLG*DRQPAA
Trigger: CGCTGCAGGTTGCCTGTCCCATCCAAGGAGTGCAGC...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGTGGGCAACCCCGGCCTaGCCTCCTGGAGAACATGCA +
Preference number: 4 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKWATPA*PPGEHA
Trigger: TGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCA...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCCACTGGCTCTGGCTTCTaGCAGACAGACCTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SADFPVPCPSPPRCHVAPTGSGF*QTDLPE
Trigger: TTCAGGCAGGTCTGTCTGCCAGAAGCCAGAGCCAGT...GGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAGCACATGGCTCTTCCTaGGTCAACCGTGACCTGTCT +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEAHGSS*VNRDLS
Trigger: AGACAGGTCACGGTTGACCCAGGAAGAGCCATGTGC...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACATGCCATCGAGGCAGGTaGCATTCAGGCTGCACTCCT +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTCHRGR*HSGCTP
Trigger: AGGAGTGCAGCCTGAATGTCACCTGCCTCGATGGCA...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACCCTCCGGTGGCACCTTaGGGACACTGTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHPPVAP*GHCPSP
Trigger: TGGAGATGGACAGTGTCCTCAAGGTGCCACCGGAGG...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTCCAGGCTGGCCTAGATaGGTCTCTCCTCCGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAPGWPR*VSPPVA
Trigger: TGCCACCGGAGGAGAGACTCATCTAGGCCAGCCTGG...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGGTGGCACGGCCGGGATaGACACTCATCGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKVARPG*TLIDVQ
Trigger: CTGGACATCGATGAGTGTGCATCCCGGCCGTGCCAC...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTCTGCCACAGTGTCACTaGAGGTTCCGCCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASLPQCH*RFRRAG
Trigger: GCCTGCACGGCGGAACCTGCAGTGACACTGTGGCAG...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGATGTGGCTGCCACCAATaGCAGCTCCAAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRCGCHQ*QLQAFL
Trigger: AAGGAAAGCTTGGAGCTGGCATTGGTGGCAGCCACA...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CACGTGGCTCCCCACATTGGACTGGACACCCATGCCTCTGGGACCCGCCAAAACACAACCTCCACCTGGTaGCAATGGCCATCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: HVAPHIGLDTHASGTRQNTTSTW*QWPSFR
Trigger: CCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGT...GTTTTGGCGGGTCCCAGAGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACCAGCGGACTCCCGAGTaGGGAGAAGGAAAGACACTG +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADQRTPE*GEGKTL
Trigger: CAGTGTCTTTCCTTCTCCGCACTCGGGAGTCCGCTG...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCAGGGAGACACCCCTCCAGCTaGCCGGCAGGTGCCCCCATT +
Preference number: 4 (lower is better)
Translates to: RPELSFPICEGSDTVYPGRHPSS*PAGAPI
Trigger: AATGGGGGCACCTGCCGGGCAGCTGGAGGGGTGTCT...CCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACGCCTCCTGGAGAACATaGAGCCTTGGGCCGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHASWRT*SLGPPL
Trigger: CAGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGC...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACGGGCAGGTGTGGCCCTaGCAGCCAGTGAGCTGCACA +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHGQVWP*QPVSCT
Trigger: TGTGCAGCTCACTGGCTGCCAGGGCCACACCTGCCC...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGTCCCAGCGGGCAGTGTaGTGCGAAACCTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKSQRAV*CETSVP
Trigger: TGGCACTGAGGTTTCGCACCACACTGCCCGCTGGGA...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCGTGTGGCCTGAAGTGTaGCTGCCACCAATGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGVWPEV*LPPMPA
Trigger: AGCTGGCATTGGTGGCAGCCACACTTCAGGCCACAC...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp TCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCCTCAGGACAAGCACAGTaGTGCTGTAGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SADFPVPCPSPPRCHVAPSGQAQ*CCSSRV
Trigger: CACTCTGGAGCTACAGCACCACTGTGCTTGTCCTGA...GGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGATCAGGACAAGCACAGTaGTGCTGTAGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRSGQAQ*CCSSRV
Trigger: CACTCTGGAGCTACAGCACCACTGTGCTTGTCCTGA...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAAGCACAACCTCCACCTaGTGCCAATGGCCATCGTTT +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALESTTST*CQWPSF
Trigger: AAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCT...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTCACGTGGGACCTCTATaGGGCCGGGCACAGTCGCAA +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAHVGPL*GRAQSQ
Trigger: TTGCGACTGTGCCCGGCCCCATAGAGGTCCCACGTG...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTTCTCATCAGCGCACGTaGGACCTCTATGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASSHQRT*DLYGAG
Trigger: CCCGGCCCCATAGAGGTCCCACGTGCGCTGATGAGA...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCGGACCTGGCAGCTCTTaGAGCAGAAAGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGGPGSS*SRKEAE
Trigger: CTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCC...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACATCAGGCTGCACTCCTTaGATGGGACAGGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTSGCTP*MGQATC
Trigger: GCAGGTTGCCTGTCCCATCCAAGGAGTGCAGCCTGA...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCTCAGGCTGCACTCCTTaGATGGGACAGGCAACCTGC +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGSGCTP*MGQATC
Trigger: GCAGGTTGCCTGTCCCATCCAAGGAGTGCAGCCTGA...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACAGCAGGCAATGTCCCGAGCCCTaGAAGCAGCTTCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PCEVGSGCLPPLTNDHSRQCPEP*KQLPWV
Trigger: GACCCAAGGAAGCTGCTTCCAGGGCTCGGGACATTG...CCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGCCCCACGTTGTCACGTaGCTCCCCACATTGGACTGG +
Preference number: 4 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKPHVVT*LPTLDW
Trigger: CCAGTCCAATGTGGGGAGCCACGTGACAACGTGGGG...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGCTGAGCATCACCAGGTaGCGGAGCCCATCATCCCAG +
Preference number: 4 (lower is better)
Translates to: EAASLGLQVETIQDLQVLLSITR*RSPSSQ
Trigger: CTGGGATGATGGGCTCCGTCACCTGGTGATGCTCAG...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCAGGGGGTCAGGCCCGAAGCTaGGCATCACCAGGTGACGGA +
Preference number: 4 (lower is better)
Translates to: RPELSFPICEGSDTVYPGGQARS*ASPGDG
Trigger: TCCGTCACCTGGTGATGCTCAGCTTCGGGCCTGACC...CCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAAGACGCAGCCCGCAGTaGGGTTCCAGGACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTARRSPQ*GSRTAC
Trigger: GCAGGCAGTCCTGGAACCTCACTGCGGGCTGCGTCT...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCGGAAGTCATTCCAGGTaGCGAGGCAAGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICGSHSR*RGKSHH
Trigger: ATGGTGGGACTTGCCTCGTCACCTGGAATGACTTCC...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCGCCGAGCAAGCGCCCTaGCGACGCGTTGTGCCCGCT +
Preference number: 4 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTAEQAP*RRVVPA
Trigger: AGCGGGCACAACGCGTCGTCAGGGCGCTTGCTCGGC...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTAGGCCTCTGTTTCCCTaGGTTGCTCCCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASRPLFP*VAPLVL
Trigger: GAGGACGAGGGGAGCAACTCAGGGAAACAGAGGCCT...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGCTCCTGAACACACTGTaGACCCACGTGTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: EAASLGLQVETIQDLQVLLLNTL*THVCPP
Trigger: GGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAG...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTAGCCCCCTCTATGTCTaGGAGGCTGCCACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASSPLYV*EAATAA
Trigger: TGCAGCAGTGGCAGCCTCTCAGACATAGAGGGGGCT...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGGTCTCTGGGCACCTaGAGATATAGCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICRSLGT*RYSLPQ
Trigger: CTGTGGCAGGCTATATCTGCAGGTGCCCAGAGACCT...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGCAGCGGGCAGTGTGGTaGGAAACCTCAGTGCCAGAC +
Preference number: 4 (lower is better)
Translates to: EAASLGLQVETIQDLQVLQRAVW*ETSVPD
Trigger: GTCTGGCACTGAGGTTTCGCACCACACTGCCCGCTG...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAGTGAGGTTCCAGGACTaGCTGCCGCCGAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTAVRFQD*LPPSSL
Trigger: CAGCGAGCTCGGCGGCAGGCAGTCCTGGAACCTCAC...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCGGAGAATCTGGCATTaGAGATACATTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQRRIWH*RYIQTP
Trigger: GGGTGTCTGAATGTATCTGCAATGCCAGATTCTCCG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACTCTGTTTCCCTGAGTTaGTCCCCTCGTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADSVSLS*SPRPPS
Trigger: GGATGGAGGACGAGGGGAGCAACTCAGGGAAACAGA...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTTCCCAGCGGGCAGTGTaGTGCGAAACCTCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASSQRAV*CETSVP
Trigger: TGGCACTGAGGTTTCGCACCACACTGCCCGCTGGGA...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCCAGCTGCGGAGTCATTaGCAAACTGGAGCAACAGGC +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGQLRSH*QTGATG
Trigger: GCCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTG...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCGGCCCACCCCAGGGCTaGCTGTCGGCAGCAAGGAGC +
Preference number: 4 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTGPPQG*LSAARS
Trigger: GCTCCTTGCTGCCGACAGCCAGCCCTGGGGTGGGCC...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCGCAGGGCAGGTACAGTaGAAGTCATTCCAGGTGACG +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGAGQVQ*KSFQVT
Trigger: CGTCACCTGGAATGACTTCCACTGTACCTGCCCTGC...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTCACCTCCTGCTGGCTTaGGCTGTAGGTGCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAHLLLA*AVGALR
Trigger: TCTGAGGGCACCTACAGCCCAAGCCAGCAGGAGGTG...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGGCCATCCTGGCACATaGCTCTTCCTGGGTCAACCG +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAGHPGT*LFLGQP
Trigger: CGGTTGACCCAGGAAGAGCCATGTGCCAGGATGGCC...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCAGGGGCTTGGCGGCCATCCTaGCACATGGCTCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RPELSFPICEGSDTVYPGAWRPS*HMALPG
Trigger: CCCAGGAAGAGCCATGTGCCAGGATGGCCGCCAAGC...CCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACAGCAGGCAGTCGCAACGGAAATaGGTCCACAGATCCACACAG +
Preference number: 4 (lower is better)
Translates to: PCEVGSGCLPPLTNDHSRQSQRK*VHRSTQ
Trigger: CTGTGTGGATCTGTGGACTCATTTCCGTTGCGACTG...CCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACTGTGGTTCCCTCGCATaGCTGGCTCTGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHCGSLA*LALASG
Trigger: GCCAGAAGCCAGAGCCAGTCATGCGAGGGAACCACA...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGGTGCCTTCCCCCTTTaGCAAATGACCACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASGAFPL*QMTTAG
Trigger: CCCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACC...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACCTCACAACAGCCCTGTaGGGTAGGCAGTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHLTTAL*GRQWVP
Trigger: AGGCACCCACTGCCTACCTCACAGGGCTGTTGTGAG...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTAGCGCCAGTGTTCACTaGGCCCCTGTACTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASSASVH*APVLSR
Trigger: TCTGCTGAGTACAGGGGCTCAGTGAACACTGGCGCT...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTACATCTCCAGGTCCATaGAGCTGGAAGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGATSPGP*SWKEAR
Trigger: CCTGGCCTCCTTCCAGCTTCATGGACCTGGAGATGT...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACGGGAAGCAGGAAGGATaGAAGGGCACATCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHGKQEG*KGTSPG
Trigger: ACCTGGAGATGTGCCCTTTCATCCTTCCTGCTTCCC...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTTATCCCAGCGTCTGCTaGCTTCCCAGTCCCATGTCC +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAYPSVC*LPSPMS
Trigger: GGACATGGGACTGGGAAGTCAGCAGACGCTGGGATA...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACTGTGGCTGCCACCAATaGCAGCTCCAAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADCGCHQ*QLQAFL
Trigger: AAGGAAAGCTTGGAGCTGGCATTGGTGGCAGCCACA...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACACAACCTCCACCTGGTaGCAATGGCCATCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: GRHALEPCQDTLTLASADTTSTW*QWPSFR
Trigger: CCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGT...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp TGTGAGCATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGCCCACGTGCACGTGCTaGCCCAGGTCCTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CEHFDPSSHFLFVKGQTQPTCTC*PRSCSW
Trigger: CCAGCTGCAGGACCTGGGGCAGCACGTGCACGTGGG...CTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp GAGGCAGAGGCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGACGGAGAATCTGGCATTaGAGATACATTCAGACACCC +
Preference number: 4 (lower is better)
Translates to: EAEAEAASQGDTSVAMSRRRIWH*RYIQTP
Trigger: GGGTGTCTGAATGTATCTGCAATGCCAGATTCTCCG...TCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGCCTCTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTCCGGCTCCATTGCCATaGCCTCCAGACAGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASPAPLP*PPDRLR
Trigger: TCTCAACCTGTCTGGAGGGCATGGCAATGGAGCCGG...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACTATGTCTGAGAGGCTaGCACTGCTGCACATGCTCA +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTLCLRG*HCCTCS
Trigger: TGAGCATGTGCAGCAGTGGCAGCCTCTCAGACATAG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCGCTCCAAGCTTTCCTTaGTGTCATTGCGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGAPSFP*CHCEWP
Trigger: TGGCCACTCGCAATGACACCAAGGAAAGCTTGGAGC...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACTGTAGCTCCAGAGTGTaGCCTGAAGTGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHCSSRV*PEVWLP
Trigger: TGGCAGCCACACTTCAGGCCACACTCTGGAGCTACA...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGTCCACCTGGTGCCAATaGCCATCGTTTAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EAASLGLQVETIQDLQVLSTWCQ*PSFRAR
Trigger: CCTGGCCCTAAACGATGGCCATTGGCACCAGGTGGA...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCGTCGCGTCCCCCAGCTaGGCAGAGGAGATCCCGGCA +
Preference number: 4 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTVASPS*AEEIPA
Trigger: TGCCGGGATCTCCTCTGCCCAGCTGGGGGACGCGAC...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGGACCTGGCAGCTCTTaGAGCAGAAAGGAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASGPGSS*SRKEAE
Trigger: CTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCC...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAGACCCTCGCGGAACGTaGCCTCCGCCACACACACAA +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTADPRGT*PPPHTQ
Trigger: TTGTGTGTGTGGCGGAGGCCACGTTCCGCGAGGGTC...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACGTCCTCCATCCAGGATaGGGCAGAGGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHVLHPG*GRGRGR
Trigger: TCTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGAC...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACGGACACCCATGCCTCTaGGACCCGCCAAAACCAAAA +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHGHPCL*DPPKPK
Trigger: TTTTGGTTTTGGCGGGTCCCAGAGGCATGGGTGTCC...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCACTGAGCATCACCAGGTaGCGGAGCCCATCATCCCAG +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTALSITR*RSPSSQ
Trigger: CTGGGATGATGGGCTCCGTCACCTGGTGATGCTCAG...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTAGGTCTCTGGGCACCTaGAGATATAGCCTGCCACAG +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASRSLGT*RYSLPQ
Trigger: CTGTGGCAGGCTATATCTGCAGGTGCCCAGAGACCT...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTAGAGGCTGCCACTGCTaGACATGCTCAGTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGARGCHC*TCSVRL
Trigger: AAGCCTCACTGAGCATGTGCAGCAGTGGCAGCCTCT...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACCATCACAGAGAAGGTaGTATTCTGGCCACAGAACG +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTPSQRR*YSGHRT
Trigger: CGTTCTGTGGCCAGAATACCACCTTCTCTGTGATGG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACGTGTGGCCTGAAGTGTaGCTGCCACCAATGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHVWPEV*LPPMPA
Trigger: AGCTGGCATTGGTGGCAGCCACACTTCAGGCCACAC...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCAGGGTCCACCTGGTGCCAATaGCCATCGTTTAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RPELSFPICEGSDTVYPGSTWCQ*PSFRAR
Trigger: CCTGGCCCTAAACGATGGCCATTGGCACCAGGTGGA...CCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGTGTGAGGTTGGGACCTaGCAGCTCTTGGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKCEVGT*QLLEQK
Trigger: TTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACA...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGAGTCATTGGCAAACTaGAGCAACAGGCCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAESLAN*SNRPAD
Trigger: GTCCGCTGGCCTGTTGCTCCAGTTTGCCAATGACTC...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGACTGGCCGGAGAATCTaGCATTGCAGATACATTCAG +
Preference number: 4 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPTGRRI*HCRYIQ
Trigger: CTGAATGTATCTGCAATGCCAGATTCTCCGGCCAGT...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGGCCACTTCACAGAACTaGCCGGAGAATCTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKATSQN*PENLAL
Trigger: CAATGCCAGATTCTCCGGCCAGTTCTGTGAAGTGGC...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAACGGCAGACACGCCCTaGAGCCATGTCAGGACACAC +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTATADTP*SHVRTH
Trigger: GTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGT...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACATGTAAACGGATCTACTaGCCTGGGAAGCAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTCKRIY*PGKQEG
Trigger: TCCTTCCTGCTTCCCAGGCCAGTAGATCCGTTTACA...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACATGCTCAGTGAGGCTTaGCGGCCATCCTGGCACATG +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHMLSEA*RPSWHM
Trigger: CATGTGCCAGGATGGCCGCCAAGCCTCACTGAGCAT...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGAACCAAGTTAAAGTATaGCCCGACCATTTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRNQVKV*PDHLRK
Trigger: TTTTCTTAAATGGTCGGGCCATACTTTAACTTGGTT...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCGCTGGCACTGATGCCTaGATGGGGCTCCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTAGTDA*MGLPAI
Trigger: GATGGCTGGGAGCCCCATTCAGGCATCAGTGCCAGC...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCACTCCAGAGTGTGGCCTaGAGTGTGGCTGCCACCAAT +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTALQSVA*SVAATN
Trigger: ATTGGTGGCAGCCACACTTCAGGCCACACTCTGGAG...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAGGCAAGTCCCACCATTaGAACAGGGGTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTAGKSHH*NRGQDC
Trigger: GCAGTCCTGACCCCTGTTTCAATGGTGGGACTTGCC...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGCAGACAGACCTGCCTaGAGGGACATTTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAADRPA*RDICSR
Trigger: CCTAGAACAAATGTCCCTTCAGGCAGGTCTGTCTGC...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTACACGCAGGAAATTGTaGGCATTTCGACCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGATRRKL*AFRPEL
Trigger: GAGCTCGGGTCGAAATGCTCACAATTTCCTGCGTGT...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAAAAGAAAACAACCATCTaGGACACGCAGGAAATTGTG +
Preference number: 4 (lower is better)
Translates to: AEAASQGDTSVAMSRALEKKTTI*DTQEIV
Trigger: CACAATTTCCTGCGTGTCTCAGATGGTTGTTTTCTT...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTCCTGCAGATATAGCCTaGCACAGTGTCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASPADIA*HSVTAG
Trigger: ACCTGCAGTGACACTGTGGCAGGCTATATCTGCAGG...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTCCTGCAGATATAGCCTaGCACAGTGTCACTGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAPADIA*HSVTAG
Trigger: ACCTGCAGTGACACTGTGGCAGGCTATATCTGCAGG...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCAGGGTCTGTTTCCCTGAGTTaGTCCCCTCGTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: RPELSFPICEGSDTVYPGSVSLS*SPRPPS
Trigger: GGATGGAGGACGAGGGGAGCAACTCAGGGAAACAGA...CCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCTCCAAGCTTTCCTTaGTGTCATTGCGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KHGRHALEPCQDTLTLASAPSFP*CHCEWP
Trigger: TGGCCACTCGCAATGACACCAAGGAAAGCTTGGAGC...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCAGGGTGTAGCTCCAGAGTGTaGCCTGAAGTGTGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RPELSFPICEGSDTVYPGCSSRV*PEVWLP
Trigger: TGGCAGCCACACTTCAGGCCACACTCTGGAGCTACA...CCCTGGGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACCATTCAAGCAGGGGTTaGCTTCACAGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHHSSRG*LHRGEW
Trigger: CCACTCTCCCCTGTGAAGCCAACCCCTGCTTGAATG...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCACAATGTCCCGAGCCCTaGAAGCAGCTTCCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTAQCPEP*KQLPWV
Trigger: GACCCAAGGAAGCTGCTTCCAGGGCTCGGGACATTG...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACAAGTTCAGGGAAAGGTaGTCCCACCTCCTACAGGAT +
Preference number: 4 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHKFRER*SHLLQD
Trigger: ATCCTGTAGGAGGTGGGACCACCTTTCCCTGAACTT...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
3UTR CAA 72 bp AAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTaGAAGACTTCCAGATTCTTTCCCCACTGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: KDTQTVLPIRRQ*KTSRFFPHCRP
Trigger: AGGACGACAGTGGGGAAAGAATCTGGAAGTCTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR TCA 90 bp TGTGAGCATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGCTCGCTGGGCTGGCTTaGGTTATCCAGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CEHFDPSSHFLFVKGQTQLAGLA*VIQWQR
Trigger: CCTCTGCCACTGGATAACTCAAGCCAGCCCAGCGAG...CTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAGGAAGTCATTCCAGGTaGCGAGGCAAGTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTAGSHSR*RGKSHH
Trigger: ATGGTGGGACTTGCCTCGTCACCTGGAATGACTTCC...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp CAAGTTAAAGTATGGCCCGACCATTTAAGAAAACAACCATCTGAGACACGCAGGGCACAGCCGTACACCTaGCAAGGCGGAACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: QVKVWPDHLRKQPSETRRAQPYT*QGGTPR
Trigger: CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGC...CCTGCGTGTCTCAGATGGTTGTTTTCTTAAATGGTCGGGCCATACTTTAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCACATTCAAGCAGGGGTTaGCTTCACAGGGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTAHSSRG*LHRGEW
Trigger: CCACTCTCCCCTGTGAAGCCAACCCCTGCTTGAATG...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGACTGGCCGGAGAATCTaGCATTGCAGATACATTCAG +
Preference number: 4 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKTGRRI*HCRYIQ
Trigger: CTGAATGTATCTGCAATGCCAGATTCTCCGGCCAGT...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp TGTGAGCATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGGTCCTCCATCCAGGATaGGGCAGAGGCAGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: CEHFDPSSHFLFVKGQTQVLHPG*GRGRGR
Trigger: TCTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGAC...CTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCGGACAAGGGGGTCTCTaGAGATGTCACCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTGQGGL*RCHPGS
Trigger: GCTCCCTGGGTGACATCTCCAGAGACCCCCTTGTCC...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACTCTAACTTAGTAAACTaGCCCTGGAACCAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHSNLVN*PWNQPP
Trigger: AGGCGGCTGGTTCCAGGGTCAGTTTACTAAGTTAGA...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp TGTGAGCATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGAACAGGGGTCAGGACTaGACATGTCCTCGGAGACGC +
Preference number: 4 (lower is better)
Translates to: CEHFDPSSHFLFVKGQTQNRGQD*TCPRRR
Trigger: GCGTCTCCGAGGACATGTGCAGTCCTGACCCCTGTT...CTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR GCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACACTCACACTAGCATCTaGAGACTAACACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHTHTSI*RLTQAQ
Trigger: CTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGT...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR GCA 90 bp GGACACACTCACACTAGCATCTGCAGACTAACACAGGCCCAGGTACACACTCACTCTGGCAGACAGACCTaGCTGAAGGGACATTTGTTC +
Preference number: 4 (lower is better)
Translates to: GHTHTSICRLTQAQVHTHSGRQT*LKGHLF
Trigger: GAACAAATGTCCCTTCAGGCAGGTCTGTCTGCCAGA...GTGAGTGTGTACCTGGGCCTGTGTTAGTCTGCAGATGCTAGTGTGAGTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCAAGCACAACCTCCACCTaGTGCCAATGGCCATCGTTT +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTASTTST*CQWPSF
Trigger: AAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCT...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CAAGTTAAAGTATGGCCCGACCATTTAAGAAAACAACCATCTGAGACACGCAGGACACAGGACCCTCCGTaGACACAAGGCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: QVKVWPDHLRKQPSETRRTQDPP*TQGRGR
Trigger: CCGGCCTCTGCCTTGTGTCCACGGAGGGTCCTGTGT...CCTGCGTGTCTCAGATGGTTGTTTTCTTAAATGGTCGGGCCATACTTTAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCATGTGAGGTTGGGACCTaGCAGCTCTTGGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTACEVGT*QLLEQK
Trigger: TTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACA...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR TCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTCCTAGGAGTTACAGCTaGCACAGGTTTTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAPRSYS*HRFSKS
Trigger: AGATTTGGAAAACCTGTGTCAGCTGTAACTCCTAGG...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR GCA 90 bp CAAGTTAAAGTATGGCCCGACCATTTAAGAAAACAACCATCTGAGACACGCAGGGCCTTGGGCCGCCCCTaGCCTAGGACTGTAATGGTT +
Preference number: 4 (lower is better)
Translates to: QVKVWPDHLRKQPSETRRALGRP*PRTVMV
Trigger: AACCATTACAGTCCTAGGGCAGGGGCGGCCCAAGGC...CCTGCGTGTCTCAGATGGTTGTTTTCTTAAATGGTCGGGCCATACTTTAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACAGTAAACACGGCACCATCACAGAGAAGGTaGTATTCTGGCCACAGAACG +
Preference number: 4 (lower is better)
Translates to: PPGISYTHHSHRHTVNTAPSQRR*YSGHRT
Trigger: CGTTCTGTGGCCAGAATACCACCTTCTCTGTGATGG...TGCCGTGTTTACTGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CCA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCGAGTCATTGGCAAACTaGAGCAACAGGCCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTESLAN*SNRPAD
Trigger: GTCCGCTGGCCTGTTGCTCCAGTTTGCCAATGACTC...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp CAAGTTAAAGTATGGCCCGACCATTTAAGAAAACAACCATCTGAGACACGCAGGTGCCGCCGAGCTCGCTaGGCTGGCTTGAGTTATCCA +
Preference number: 4 (lower is better)
Translates to: QVKVWPDHLRKQPSETRRCRRAR*AGLSYP
Trigger: TGGATAACTCAAGCCAGCCCAGCGAGCTCGGCGGCA...CCTGCGTGTCTCAGATGGTTGTTTTCTTAAATGGTCGGGCCATACTTTAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CCA 90 bp TGTGAGCATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTGTCTGGCTCAGGAATaGGCTCTGCTAGTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: CEHFDPSSHFLFVKGQTQCLAQE*ALLVAF
Trigger: GAAGGCCACTAGCAGAGCCCATTCCTGAGCCAGACA...CTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATGCTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTCTCATTTCCTATTTGTaGAGGGTCAGACACAGTCTA +
Preference number: 4 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGALISYL*RVRHSL
Trigger: TAGACTGTGTCTGACCCTTCACAAATAGGAAATGAG...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CAAGTTAAAGTATGGCCCGACCATTTAAGAAAACAACCATCTGAGACACGCAGGTTCCTGGGTCAACCGTaGCCTGTCTGGCTCAGGAAT +
Preference number: 4 (lower is better)
Translates to: QVKVWPDHLRKQPSETRRFLGQP*PVWLRN
Trigger: ATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAA...CCTGCGTGTCTCAGATGGTTGTTTTCTTAAATGGTCGGGCCATACTTTAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR TCA 90 bp CAAGTTAAAGTATGGCCCGACCATTTAAGAAAACAACCATCTGAGACACGCAGGCAGTCGCAACGGAAATaGGTCCACAGATCCACACAG +
Preference number: 4 (lower is better)
Translates to: QVKVWPDHLRKQPSETRRQSQRK*VHRSTQ
Trigger: CTGTGTGGATCTGTGGACTCATTTCCGTTGCGACTG...CCTGCGTGTCTCAGATGGTTGTTTTCTTAAATGGTCGGGCCATACTTTAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS CCA 90 bp GACGCACGCGGTGCCAGGCACCATCGGCCACGCGCGGCCCCGGTATaGGCAGCACAGCGCCGGGCAGGCCATGGCCTCCGCGCACGCCCC +
Preference number: 5 (lower is better)
Translates to: DARGARHHRPRAAPV*AAQRRAGHGLRARP
Trigger: GGGGCGTGCGCGGAGGCCATGGCCTGCCCGGCGCTGTGCTGCCCATACCGGGGCCGCGCGTGGCCGATGGTGCCTGGCACCGCGTGCGTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp CCAGCCACAGCAGCCAGCGCGAGGTGGTGGCCGCCGGGCGCTCCATaGCCAGACGCACGCGGTGCCAGGCACCATCGGCCACGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: PATAASARWWPPGAP*PDARGARHHRPRAA
Trigger: GGCCGCGCGTGGCCGATGGTGCCTGGCACCGCGTGCGTCTGGCCATGGAGCGCCCGGCGGCCACCACCTCGCGCTGGCTGCTGTGGCTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp CGCGAGGTGGTGGCCGCCGGGCGCTCCATGGCCAGACGCACGCGGTaGCAGGCACCATCGGCCACGCGCGGCCCCGGTATGGGCAGCACA +
Preference number: 5 (lower is better)
Translates to: REVVAAGRSMARRTR*QAPSATRGPGMGST
Trigger: TGTGCTGCCCATACCGGGGCCGCGCGTGGCCGATGGTGCCTGGCACCGCGTGCGTCTGGCCATGGAGCGCCCGGCGGCCACCACCTCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp CCGGGGTGGCGGCACCATCCAGCCACAGCAGCCAGCGCGAGGTGGTaGCCGCCGGGCGCTCCATGGCCAGACGCACGCGGTGCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: PGWRHHPATAASARW*PPGAPWPDARGARH
Trigger: GTGCCTGGCACCGCGTGCGTCTGGCCATGGAGCGCCCGGCGGCCACCACCTCGCGCTGGCTGCTGTGGCTGGATGGTGCCGCCACCCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp CCACCGGGGTGGCGGCACCATCCAGCCACAGCAGCCAGCGCGAGGTaGTGGCCGCCGGGCGCTCCATGGCCAGACGCACGCGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PPGWRHHPATAASAR*WPPGAPWPDARGAR
Trigger: CCTGGCACCGCGTGCGTCTGGCCATGGAGCGCCCGGCGGCCACCACCTCGCGCTGGCTGCTGTGGCTGGATGGTGCCGCCACCCCGGTGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp GGGGTCCCAGGCCTGGCCAGCGCCATGGCAGCCCGCTCTGCGCTCTaGTCGGCTGCTGTGAGAACGGGAGGGCGGCCTGGCTGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: GVPGLASAMAARSAL*SAAVRTGGRPGWLR
Trigger: GCGGAGCCAGCCAGGCCGCCCTCCCGTTCTCACAGCAGCCGAGCAGAGCGCAGAGCGGGCTGCCATGGCGCTGGCCAGGCCTGGGACCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS CCA 90 bp GCAGGAAGCCCAGGTCACTGGCCAGGCCGCGCAGCGCCACCGGGGTaGCGGCACCATCCAGCCACAGCAGCCAGCGCGAGGTGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: AGSPGHWPGRAAPPG*RHHPATAASARWWP
Trigger: CGGCCACCACCTCGCGCTGGCTGCTGTGGCTGGATGGTGCCGCCACCCCGGTGGCGCTGCGCGGCCTGGCCAGTGACCTGGGCTTCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp CAGGCGCAGGCAAAGGCGTCGAAGAGGTCACGGCAGGCACCGTCGTaGAGACAGGGCGAGGGCGCACACACGGGCGCGCCGCGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: QAQAKASKRSRQAPS*RQGEGAHTGAPRQP
Trigger: CGGCTGCCGCGGCGCGCCCGTGTGTGCGCCCTCGCCCTGTCTGCACGACGGTGCCTGCCGTGACCTCTTCGACGCCTTTGCCTGCGCCTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp CCCGAGGCCCTCGAGGCAGGACGCGTTGTGCTCGCAGGGCGCCGATaGGCACTCCAGCACCTCCCGCTCGCAGTGCGTGCCCTCGTAGCC +
Preference number: 5 (lower is better)
Translates to: PEALEAGRVVLAGRR*ALQHLPLAVRALVA
Trigger: GGCTACGAGGGCACGCACTGCGAGCGGGAGGTGCTGGAGTGCGCATCGGCGCCCTGCGAGCACAACGCGTCCTGCCTCGAGGGCCTCGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 90 bp CAGAGGCAGCGGAAGCTCCCGAGGCCCTCGAGGCAGGACGCGTTGTaGTCGCAGGGCGCCGATGCGCACTCCAGCACCTCCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: QRQRKLPRPSRQDAL*SQGADAHSSTSRSQ
Trigger: CTGCGAGCGGGAGGTGCTGGAGTGCGCATCGGCGCCCTGCGAGCACAACGCGTCCTGCCTCGAGGGCCTCGGGAGCTTCCGCTGCCTCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 90 bp CCGGTGAAGTTCTCAGCCAGCAGGATGCGCACAGCACCCGGGCCCTaGAGGAAGCCCAGGTCACTGGCCAGGCCGCGCAGCGCCACCGGG +
Preference number: 5 (lower is better)
Translates to: PVKFSASRMRTAPGP*RKPRSLARPRSATG
Trigger: CCCGGTGGCGCTGCGCGGCCTGGCCAGTGACCTGGGCTTCCTGCAGGGCCCGGGTGCTGTGCGCATCCTGCTGGCTGAGAACTTCACCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGCGCCCTGACGACGCGTaGTGCCCGCTGAACGCGGCG +
Preference number: 5 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRRPDDA*CPLNAA
Trigger: CGCCGCGTTCAGCGGGCACAACGCGTCGTCAGGGCG...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp CCACCCCAGGGCTGGCTGTCGGCAGCAAGGAGCCTCCCACCCACGTaGACGTGCTGCCCCAGGTCCTGCAGCTGGTCAGGCCCGAAGCTG +
Preference number: 5 (lower is better)
Translates to: PPQGWLSAARSLPPT*TCCPRSCSWSGPKL
Trigger: CAGCTTCGGGCCTGACCAGCTGCAGGACCTGGGGCAGCACGTGCACGTGGGTGGGAGGCTCCTTGCTGCCGACAGCCAGCCCTGGGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp AGTCGCAGGTCCTGGAGGCAGCCTCGGAAGGGCCCACCCCAGGGCTaGCTGTCGGCAGCAAGGAGCCTCCCACCCACGTGCACGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SRRSWRQPRKGPPQG*LSAARSLPPTCTCC
Trigger: GCAGCACGTGCACGTGGGTGGGAGGCTCCTTGCTGCCGACAGCCAGCCCTGGGGTGGGCCCTTCCGAGGCTGCCTCCAGGACCTGCGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp CCTGGCACTCGGTCCCTGGAGCGCACGGGTCTGAGGCACAGGCACTaGGGGGCTCTGAAGGCACCGTCCCAGCCAGGAGGGAAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PGTRSLERTGLRHRH*GALKAPSQPGGKGQ
Trigger: CTGCCCTTTCCCTCCTGGCTGGGACGGTGCCTTCAGAGCCCCCCAGTGCCTGTGCCTCAGACCCGTGCGCTCCAGGGACCGAGTGCCAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 90 bp CAGGGCTGGCTGTCGGCAGCAAGGAGCCTCCCACCCACGTGCACGTaGTGCCCCAGGTCCTGCAGCTGGTCAGGCCCGAAGCTGAGCATC +
Preference number: 5 (lower is better)
Translates to: QGWLSAARSLPPTCT*CPRSCSWSGPKLSI
Trigger: GATGCTCAGCTTCGGGCCTGACCAGCTGCAGGACCTGGGGCAGCACGTGCACGTGGGTGGGAGGCTCCTTGCTGCCGACAGCCAGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp GCCCTGGAAACCCGGCACGCAGTAGCAGCGGAAGCCGGTGGGATCTaGACCCTGGGGCACACACAGAGCGCCGTGGTGGCATGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: ALETRHAVAAEAGGI*TLGHTQSAVVAWLG
Trigger: ACCCAGCCATGCCACCACGGCGCTCTGTGTGTGCCCCAGGGTCCAGATCCCACCGGCTTCCGCTGCTACTGCGTGCCGGGTTTCCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS CCA 90 bp AGCGTGGGCCCTGGAAACCCGGCACGCAGTAGCAGCGGAAGCCGGTaGGATCTGGACCCTGGGGCACACACAGAGCGCCGTGGTGGCATG +
Preference number: 5 (lower is better)
Translates to: SVGPGNPARSSSGSR*DLDPGAHTERRGGM
Trigger: CATGCCACCACGGCGCTCTGTGTGTGCCCCAGGGTCCAGATCCCACCGGCTTCCGCTGCTACTGCGTGCCGGGTTTCCAGGGCCCACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS CCA 90 bp ACACGCACGTCCTGGAGGCAGCCTGCAAAGGTCGCGTCCCCCAGCTaGGCAGAGGAGATCCCGGCAGGCAGCGGAGTTGCCGAAGCCGTG +
Preference number: 5 (lower is better)
Translates to: TRTSWRQPAKVASPS*AEEIPAGSGVAEAV
Trigger: CACGGCTTCGGCAACTCCGCTGCCTGCCGGGATCTCCTCTGCCCAGCTGGGGGACGCGACCTTTGCAGGCTGCCTCCAGGACGTGCGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp GACACTGTCCATCTCCAGCCGGGCCCCAGCCACCTCCTGCTGGCTTaGGCTGTAGGTGCCCTCAGACTGGCGGCGCTTTCGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: DTVHLQPGPSHLLLA*AVGALRLAALSGCQ
Trigger: CTGGCAGCCCGAAAGCGCCGCCAGTCTGAGGGCACCTACAGCCCAAGCCAGCAGGAGGTGGCTGGGGCCCGGCTGGAGATGGACAGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGCCCGCCAGCGAGCCATaGCGCACCGCCAGCCACACG +
Preference number: 5 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQPASEP*RTASHT
Trigger: CGTGTGGCTGGCGGTGCGCAATGGCTCGCTGGCGGG...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS TCA 90 bp GTAGGTGCCCTCAGACTGGCGGCGCTTTCGGGCTGCCAGGATCCCTaGAAGGAGGCCCAGGAGGAGGAGGAGGAGGCAGGCACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VGALRLAALSGCQDP*KEAQEEEEEAGTGC
Trigger: GCAGCCTGTGCCTGCCTCCTCCTCCTCCTCCTGGGCCTCCTTTCAGGGATCCTGGCAGCCCGAAAGCGCCGCCAGTCTGAGGGCACCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp CCGAGATCCTCAGGCAGCAGGAGGTGGCCATCCACACGCACGTCCTaGAGGCAGCCTGCAAAGGTCGCGTCCCCCAGCTGGGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: PRSSGSRRWPSTRTS*RQPAKVASPSWAEE
Trigger: CTCCTCTGCCCAGCTGGGGGACGCGACCTTTGCAGGCTGCCTCCAGGACGTGCGTGTGGATGGCCACCTCCTGCTGCCTGAGGATCTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 90 bp AACAGGGGTCAGGACTGCACATGTCCTCGGAGACGCAGCCCGCAGTaGGGTTCCAGGACTGCCTGCCGCCGAGCTCGCTGGGCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: NRGQDCTCPRRRSPQ*GSRTACRRARWAGL
Trigger: CAAGCCAGCCCAGCGAGCTCGGCGGCAGGCAGTCCTGGAACCTCACTGCGGGCTGCGTCTCCGAGGACATGTGCAGTCCTGACCCCTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp CCTGGGCAACCCCGGCCTGGCCTCCTGGAGAACATGCAGCCTTGGGCCGCCCCTCCAGCTGCGGAGTCATaGGCAAACTGGAGCAACAGG +
Preference number: 5 (lower is better)
Translates to: PGQPRPGLLENMQPWAAPPAAES*ANWSNR
Trigger: CCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTGG...AGGGGCGGCCCAAGGCTGCATGTTCTCCAGGAGGCCAGGCCGGGGTTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS TCA 90 bp CCCAGGTCCTGCAGCTGGTCAGGCCCGAAGCTGAGCATCACCAGGTaGCGGAGCCCATCATCCCAGCGCCCAGGGAGCACTACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PRSCSWSGPKLSITR*RSPSSQRPGSTTAG
Trigger: TCCTGCTGTAGTGCTCCCTGGGCGCTGGGATGATGGGCTCCGTCACCTGGTGATGCTCAGCTTCGGGCCTGACCAGCTGCAGGACCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp CTGCATAGCCAAGGGGGCAATGGCACTCGTAGCGATCGGCCAGGTTaGGGCAGGTGGCCCCATGGTGGCACGGCCGGGATGCACACTCAT +
Preference number: 5 (lower is better)
Translates to: LHSQGGNGTRSDRPG*GRWPHGGTAGMHTH
Trigger: ATGAGTGTGCATCCCGGCCGTGCCACCATGGGGCCACCTGCCGCAACCTGGCCGATCGCTACGAGTGCCATTGCCCCCTTGGCTATGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 90 bp CCTTGGTGTCATTGCGAGTGGCCAAGGTCCCAGCGGGCAGTGTGGTaGGAAACCTCAGTGCCAGACCCAGGGGGCCACCAGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: PWCHCEWPRSQRAVW*ETSVPDPGGHQLAL
Trigger: CAGTGCCAGCTGGTGGCCCCCTGGGTCTGGCACTGAGGTTTCGCACCACACTGCCCGCTGGGACCTTGGCCACTCGCAATGACACCAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp GACGGAGCCCATCATCCCAGCGCCCAGGGAGCACTACAGCAGGACTaGCCGGCACCTCAGCCCGGATCCGACCCTCACTCAGGAATACTG +
Preference number: 5 (lower is better)
Translates to: DGAHHPSAQGALQQD*PAPQPGSDPHSGIL
Trigger: CAGTATTCCTGAGTGAGGGTCGGATCCGGGCTGAGGTGCCGGGCAGTCCTGCTGTAGTGCTCCCTGGGCGCTGGGATGATGGGCTCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp CTGCACATGTCCTCGGAGACGCAGCCCGCAGTGAGGTTCCAGGACTaGCTGCCGCCGAGCTCGCTGGGCTGGCTTGAGTTATCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LHMSSETQPAVRFQD*LPPSSLGWLELSSG
Trigger: GCCACTGGATAACTCAAGCCAGCCCAGCGAGCTCGGCGGCAGGCAGTCCTGGAACCTCACTGCGGGCTGCGTCTCCGAGGACATGTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp AAGCCATCAGGGACCTCCTCACACGTGGCAGGTGGGAGACAGGGCTaGCCGGGACACCACAGCTGCTGGGCACACGTAGGCCCCGTGAAA +
Preference number: 5 (lower is better)
Translates to: KPSGTSSHVAGGRQG*PGHHSCWAHVGPVK
Trigger: TTTCACGGGGCCTACGTGTGCCCAGCAGCTGTGGTGTCCCGGCCAGCCCTGTCTCCCACCTGCCACGTGTGAGGAGGTCCCTGATGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACGCCCTGACGACGCGTaGTGCCCGCTGAACGCGGCG +
Preference number: 5 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTRPDDA*CPLNAA
Trigger: CGCCGCGTTCAGCGGGCACAACGCGTCGTCAGGGCG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGGGGTGCCTTCCCCCTTaGACAAATGACCACAGCAGG +
Preference number: 5 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRGCLPP*TNDHSR
Trigger: CCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACCC...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS GCA 90 bp ACAGTCGCGCCCACCCCAGGTCTCTGGGCACCTGCAGATATAGCCTaGCACAGTGTCACTGCAGGTTCCGCCGTGCAGGCAGGGATCCGA +
Preference number: 5 (lower is better)
Translates to: TVAPTPGLWAPADIA*HSVTAGSAVQAGIR
Trigger: TCGGATCCCTGCCTGCACGGCGGAACCTGCAGTGACACTGTGGCAGGCTATATCTGCAGGTGCCCAGAGACCTGGGGTGGGCGCGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp AGATCCACACAGGACCCTCCGTGGACACAAGGCAGAGGCCGGCACTaGTCTCGGCGCTCACAGCCCAGGAGGACGTTCTCACCGAGATCC +
Preference number: 5 (lower is better)
Translates to: RSTQDPPWTQGRGRH*SRRSQPRRTFSPRS
Trigger: GGATCTCGGTGAGAACGTCCTCCTGGGCTGTGAGCGCCGAGAGCAGTGCCGGCCTCTGCCTTGTGTCCACGGAGGGTCCTGTGTGGATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp ACACACACTCCTGAACACACTGTGAACCCACGTGTGCCCTCCCACGCACAGCCGCGGCAGGCAGCGGAGTaGCCGAAGCCGTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: THTPEHTVNPRVPSHAQPRQAAE*PKPWKP
Trigger: TGGCTTCCACGGCTTCGGCAACTCCGCTGCCTGCCG...CGGCTGTGCGTGGGAGGGCACACGTGGGTTCACAGTGTGTTCAGGAGTGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp CCACGTGTGCCCTCCCACGCACAGCCGTACACCTGCCAAGGCGGAACCCCGAGGAAAGACACTGTGAGGTaGGGACCTGGCAGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: PRVPSHAQPYTCQGGTPRKDTVR*GPGSSW
Trigger: CCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTT...CCTCGGGGTTCCGCCTTGGCAGGTGTACGGCTGTGCGTGGGAGGGCACACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp TCGCCGGGGAAGGGGCTGGGAGCAAGCAGCAGAGTCTCCTCTGAGTCGGCCTCTTCCTCCGGTGGCACCTaGAGGACACTGTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: SPGKGLGASSRVSSESASSSGGT*RTLSIS
Trigger: GGAGATGGACAGTGTCCTCAAGGTGCCACCGGAGGA...AGAGGCCGACTCAGAGGAGACTCTGCTGCTTGCTCCCAGCCCCTTCCCCGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS CCA 90 bp TTTCCTTGGTGTCATTGCGAGTGGCCAAGGTCCCAGCGGGCAGTGTaGTGCGAAACCTCAGTGCCAGACCCAGGGGGCCACCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: FPWCHCEWPRSQRAV*CETSVPDPGGHQLA
Trigger: TGCCAGCTGGTGGCCCCCTGGGTCTGGCACTGAGGTTTCGCACCACACTGCCCGCTGGGACCTTGGCCACTCGCAATGACACCAAGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp GCAGGGCAGCCCTCATGCCAGAGCCGTAGCTCCAGGGTCGCTAGATaGAGCACAACCTCCACCTGGTGCCAATGGCCATCGTTTAGGGCC +
Preference number: 5 (lower is better)
Translates to: AGQPSCQSRSSRVAR*STTSTWCQWPSFRA
Trigger: GGCCCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGAGCTACGGCTCTGGCATGAGGGCTGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp ACCCTCCAGGCAGCTGCAGTTGGCAGCGGGAGAGCCACCCTCACATaGGCTGCCATCGAGGCAGGTGACATTCAGGCTGCACTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: TLQAAAVGSGRATLT*AAIEAGDIQAALLG
Trigger: TCCAAGGAGTGCAGCCTGAATGTCACCTGCCTCGATGGCAGCCCATGTGAGGGTGGCTCTCCCGCTGCCAACTGCAGCTGCCTGGAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp GGAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTCCCGCCAGCGAGCCATaGCGCACCGCCAGCCACACG +
Preference number: 5 (lower is better)
Translates to: GSSFLGSPGRNHSGPPGAPASEP*RTASHT
Trigger: CGTGTGGCTGGCGGTGCGCAATGGCTCGCTGGCGGG...AGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp GGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCAGACTCCAGGCAGCTGCAGTaGGCAGCGGGAGAGCCACCC +
Preference number: 5 (lower is better)
Translates to: GRHALEPCQDTLTLASADSRQLQ*AAGEPP
Trigger: GGGTGGCTCTCCCGCTGCCAACTGCAGCTGCCTGGA...GTCTGCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCTCCAGGCAGCTGCAGTaGGCAGCGGGAGAGCCACCC +
Preference number: 5 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICSRQLQ*AAGEPP
Trigger: GGGTGGCTCTCCCGCTGCCAACTGCAGCTGCCTGGA...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp GCAGAGGCTGCCAGCCAAGGGGACACTTCCGTAGCAATGTCCCGAGCCCTGGAATCCCAGTCCCCCACGTaGTCACGTGGCTCCCCACAT +
Preference number: 5 (lower is better)
Translates to: AEAASQGDTSVAMSRALESQSPT*SRGSPH
Trigger: ATGTGGGGAGCCACGTGACAACGTGGGGGACTGGGA...TTCCAGGGCTCGGGACATTGCTACGGAAGTGTCCCCTTGGCTGGCAGCCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS TCA 90 bp GCGCACGTGGGACCTCTATGGGGCCGGGCACAGTCGCAACGGAAATaGGTCCACAGATCCACACAGGACCCTCCGTGGACACAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: AHVGPLWGRAQSQRK*VHRSTQDPPWTQGR
Trigger: TCTGCCTTGTGTCCACGGAGGGTCCTGTGTGGATCTGTGGACTCATTTCCGTTGCGACTGTGCCCGGCCCCATAGAGGTCCCACGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp CAGAGCCGTAGCTCCAGGGTCGCTAGATGGAGCACAACCTCCACCTaGTGCCAATGGCCATCGTTTAGGGCCAGGTCCGGCAGTCTCAGG +
Preference number: 5 (lower is better)
Translates to: QSRSSRVARWSTTST*CQWPSFRARSGSLR
Trigger: CCTGAGACTGCCGGACCTGGCCCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGAGCTACGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp GGACTCCCGAGTGCGGAGAAGGAAAGACACTGTGAGGTTGGGACCTaGCAGCTCTTGGAGCAGAAAGGAGGCAGAGCTTGGGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: GLPSAEKERHCEVGT*QLLEQKGGRAWGAS
Trigger: GGAGGCGCCCCAAGCTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCTTCTCCGCACTCGGGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp CAACAGCCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACTCGAGGCAGGACGCGTaGTGCTCGCAGGGCGCCGAT +
Preference number: 5 (lower is better)
Translates to: QQPCEVGSGCLPPLTNDHSRQDA*CSQGAD
Trigger: ATCGGCGCCCTGCGAGCACAACGCGTCCTGCCTCGA...GTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGGCTGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp ACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTGCTGGCAGTGGCCTCCGTaGAGGCATGGCCGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: TRQTRPGAMSGHTHTSICWQWPP*RHGREA
Trigger: TGCCTCACGGCCATGCCTCAACGGAGGCCACTGCCA...GCAGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCACCAGCTGCGGAGTCATaGGCAAACTGGAGCAACAGG +
Preference number: 5 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSAPAAES*ANWSNR
Trigger: CCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTGG...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp CCCAGCCCCGACTCAGAGGCAGCGCCAGTGTTCACTGAGCCCCTGTACTCAGCAAGGGCAGGAGAAGGGTaGCTCTGTCATCCTCATCCC +
Preference number: 5 (lower is better)
Translates to: PSPDSEAAPVFTEPLYSARAGEG*LCHPHP
Trigger: GGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT...TGCTGAGTACAGGGGCTCAGTGAACACTGGCGCTGCCTCTGAGTCGGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS TCA 90 bp GGTGCGAAACCTCAGTGCCAGACCCAGGGGGCCACCAGCTGGCACTaGTGCCTGAATGGGGCTCCCAGCCATCACAGAGAAGGTGGTATT +
Preference number: 5 (lower is better)
Translates to: GAKPQCQTQGATSWH*CLNGAPSHHREGGI
Trigger: AATACCACCTTCTCTGTGATGGCTGGGAGCCCCATTCAGGCATCAGTGCCAGCTGGTGGCCCCCTGGGTCTGGCACTGAGGTTTCGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 90 bp GCAACAGGCCAGCGGACTCCCGAGTGCGGAGAAGGAAAGACACTGTaGGGTTGGGACCTGGCAGCTCTTGGAGCAGAAAGGAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ATGQRTPECGEGKTL*GWDLAALGAERRQS
Trigger: GCTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCTTCTCCGCACTCGGGAGTCCGCTGGCCTGTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp CCCAGGTCTCTGGGCACCTGCAGATATAGCCTGCCACAGTGTCACTaGAGGTTCCGCCGTGCAGGCAGGGATCCGACAGGCATTCATCCA +
Preference number: 5 (lower is better)
Translates to: PRSLGTCRYSLPQCH*RFRRAGRDPTGIHP
Trigger: TGGATGAATGCCTGTCGGATCCCTGCCTGCACGGCGGAACCTGCAGTGACACTGTGGCAGGCTATATCTGCAGGTGCCCAGAGACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 90 bp AGCCGTAGCTCCAGGGTCGCTAGATGGAGCACAACCTCCACCTGGTaGCAATGGCCATCGTTTAGGGCCAGGTCCGGCAGTCTCAGGACA +
Preference number: 5 (lower is better)
Translates to: SRSSRVARWSTTSTW*QWPSFRARSGSLRT
Trigger: TGTCCTGAGACTGCCGGACCTGGCCCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGAGCTACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp TGGCCTGAAGTGTGGCTGCCACCAATGCCAGCTCCAAGCTTTCCTTaGTGTCATTGCGAGTGGCCAAGGTCCCAGCGGGCAGTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: WPEVWLPPMPAPSFP*CHCEWPRSQRAVWC
Trigger: GCACCACACTGCCCGCTGGGACCTTGGCCACTCGCAATGACACCAAGGAAAGCTTGGAGCTGGCATTGGTGGCAGCCACACTTCAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp GGCCATCGTTTAGGGCCAGGTCCGGCAGTCTCAGGACAAGCACAGTaGTGCTGTAGCTCCAGAGTGTGGCCTGAAGTGTGGCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: GHRLGPGPAVSGQAQ*CCSSRVWPEVWLPP
Trigger: TGGTGGCAGCCACACTTCAGGCCACACTCTGGAGCTACAGCACCACTGTGCTTGTCCTGAGACTGCCGGACCTGGCCCTAAACGATGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp GAGGTTGGGACCTGGCAGCTCTTGGAGCAGAAAGGAGGCAGAGCTTaGGGCGCCTCCCAAGCCAAAGGTGGCAGCAGGAATCTCATCAGC +
Preference number: 5 (lower is better)
Translates to: EVGTWQLLEQKGGRA*GASQAKGGSRNLIS
Trigger: GCTGATGAGATTCCTGCTGCCACCTTTGGCTTGGGAGGCGCCCCAAGCTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp TCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCAGCCAGTCATCAGGGGAAGTCGCACCGGAACCCGTaGACCAGGTCGTGGCACGTG +
Preference number: 5 (lower is better)
Translates to: SFKSSRRVCVEAASHQGKSHRNP*TRSWHV
Trigger: CACGTGCCACGACCTGGTCAACGGGTTCCGGTGCGA...CTTCCCCTGATGACTGGCTGCCTCTACACAGACTCGGCGAGAGGACTTGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp TCCCTGAGTTGCTCCCCTCGTCCTCCATCCAGGATGGGGCAGAGGCAGAGGCAGAGGCAAGTCCCACCATaGAAACAGGGGTCAGGACTG +
Preference number: 5 (lower is better)
Translates to: SLSCSPRPPSRMGQRQRQRQVPP*KQGSGL
Trigger: CAGTCCTGACCCCTGTTTCAATGGTGGGACTTGCCT...CTGCCTCTGCCTCTGCCCCATCCTGGATGGAGGACGAGGGGAGCAACTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGGAGCCCCCGGCTCCATaGCCATGCCCTCCAGACAGG +
Preference number: 5 (lower is better)
Translates to: EAASLGLQVETIQDLQVLEPPAP*PCPPDR
Trigger: CCTGTCTGGAGGGCATGGCAATGGAGCCGGGGGCTC...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS GCA 90 bp GTGTGGCTGCCACCAATGCCAGCTCCAAGCTTTCCTTGGTGTCATTaGGAGTGGCCAAGGTCCCAGCGGGCAGTGTGGTGCGAAACCTCA +
Preference number: 5 (lower is better)
Translates to: VWLPPMPAPSFPWCH*EWPRSQRAVWCETS
Trigger: TGAGGTTTCGCACCACACTGCCCGCTGGGACCTTGGCCACTCGCAATGACACCAAGGAAAGCTTGGAGCTGGCATTGGTGGCAGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp CTGCCACCAATGCCAGCTCCAAGCTTTCCTTGGTGTCATTGCGAGTaGCCAAGGTCCCAGCGGGCAGTGTGGTGCGAAACCTCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: LPPMPAPSFPWCHCE*PRSQRAVWCETSVP
Trigger: TGGCACTGAGGTTTCGCACCACACTGCCCGCTGGGACCTTGGCCACTCGCAATGACACCAAGGAAAGCTTGGAGCTGGCATTGGTGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp AGCTCCAGGGTCGCTAGATGGAGCACAACCTCCACCTGGTGCCAATaGCCATCGTTTAGGGCCAGGTCCGGCAGTCTCAGGACAAGCACA +
Preference number: 5 (lower is better)
Translates to: SSRVARWSTTSTWCQ*PSFRARSGSLRTST
Trigger: TGTGCTTGTCCTGAGACTGCCGGACCTGGCCCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp GTGCGGAGAAGGAAAGACACTGTGAGGTTGGGACCTGGCAGCTCTTaGAGCAGAAAGGAGGCAGAGCTTGGGGCGCCTCCCAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VRRRKDTVRLGPGSS*SRKEAELGAPPKPK
Trigger: CTTTGGCTTGGGAGGCGCCCCAAGCTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCTTCTCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp TCTGCTGACTTCCCAGTCCCATGTCCCAGTCCCCCACGTTGTCACGTGGCTCCCCTTTCCTTGGTGTCATaGCGAGTGGCCAAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SADFPVPCPSPPRCHVAPLSLVS*RVAKVP
Trigger: TGGGACCTTGGCCACTCGCAATGACACCAAGGAAAG...GGGAGCCACGTGACAACGTGGGGGACTGGGACATGGGACTGGGAAGTCAGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp GGGTCTCTGGAGATGTCACCCAGGGAGCCCCCTCTATGTCTGAGAGGCTGCCACAGGCAAGTCCCACCATaGAAACAGGGGTCAGGACTG +
Preference number: 5 (lower is better)
Translates to: GSLEMSPREPPLCLRGCHRQVPP*KQGSGL
Trigger: CAGTCCTGACCCCTGTTTCAATGGTGGGACTTGCCT...GTGGCAGCCTCTCAGACATAGAGGGGGCTCCCTGGGTGACATCTCCAGAGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CAA 90 bp GCAGACAACCCAGAGGGCTTCCTTCAAGTCCTCTCGCCGAGTCTGTGTAGAGGCACGTGGCTCCCCACATaGGACTGGACACCCATGCCT +
Preference number: 5 (lower is better)
Translates to: ADNPEGFLQVLSPSLCRGTWLPT*DWTPMP
Trigger: AGGCATGGGTGTCCAGTCCAATGTGGGGAGCCACGT...GCCTCTACACAGACTCGGCGAGAGGACTTGAAGGAAGCCCTCTGGGTTGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS CCA 90 bp CCGGCAGTCTCAGGACAAGCACAGTGGTGCTGTAGCTCCAGAGTGTaGCCTGAAGTGTGGCTGCCACCAATGCCAGCTCCAAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: PAVSGQAQWCCSSRV*PEVWLPPMPAPSFP
Trigger: AGGAAAGCTTGGAGCTGGCATTGGTGGCAGCCACACTTCAGGCCACACTCTGGAGCTACAGCACCACTGTGCTTGTCCTGAGACTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp TCCGACCCTCACTCAGGAATACTGTTAGGCCAGCTGCGGAGTCATTaGCAAACTGGAGCAACAGGCCAGCGGACTCCCGAGTGCGGAGAA +
Preference number: 5 (lower is better)
Translates to: SDPHSGILLGQLRSH*QTGATGQRTPECGE
Trigger: TTCTCCGCACTCGGGAGTCCGCTGGCCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTGGCCTAACAGTATTCCTGAGTGAGGGTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp GCGCAGCCGCCACCTCCTGGGATCAGCTACACCCATCACAGTCATAGACACACACTCTGTTTCCCTGAGTaGCTCCCCTCGTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: AQPPPPGISYTHHSHRHTLCFPE*LPSSSI
Trigger: GATGGAGGACGAGGGGAGCAACTCAGGGAAACAGAG...TGTGTGTCTATGACTGTGATGGGTGTAGCTGATCCCAGGAGGTGGCGGCTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp TCTTCCTGGGTCAACCGTGACCTGTCTGGCTCAGGAATGGGCTCTGCTAGTGGCCTCTGTTTCCCTGAGTaGCTCCCCTCGTCCTCCATC +
Preference number: 5 (lower is better)
Translates to: SSWVNRDLSGSGMGSASGLCFPE*LPSSSI
Trigger: GATGGAGGACGAGGGGAGCAACTCAGGGAAACAGAG...GCCACTAGCAGAGCCCATTCCTGAGCCAGACAGGTCACGGTTGACCCAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CAA 90 bp AGGGCAGGAGAAGGGTTGCTCTGTCATCCTCATCCCAGAAGGACACCCAGACGGAAAGACACTGTGAGGTaGGGACCTGGCAGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: RAGEGLLCHPHPRRTPRRKDTVR*GPGSSW
Trigger: CCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTT...CCGTCTGGGTGTCCTTCTGGGATGAGGATGACAGAGCAACCCTTCTCCTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp GAAGCAGCTTCCTTGGGTCTCCAGGTAGAAACCATTCAGGACCTCCAGGTGCTGTCCTCCGGTGGCACCTaGAGGACACTGTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: EAASLGLQVETIQDLQVLSSGGT*RTLSIS
Trigger: GGAGATGGACAGTGTCCTCAAGGTGCCACCGGAGGA...CAGCACCTGGAGGTCCTGAATGGTTTCTACCTGGAGACCCAAGGAAGCTGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp GGACAAGCACAGTGGTGCTGTAGCTCCAGAGTGTGGCCTGAAGTGTaGCTGCCACCAATGCCAGCTCCAAGCTTTCCTTGGTGTCATTGC +
Preference number: 5 (lower is better)
Translates to: GQAQWCCSSRVWPEV*LPPMPAPSFPWCHC
Trigger: GCAATGACACCAAGGAAAGCTTGGAGCTGGCATTGGTGGCAGCCACACTTCAGGCCACACTCTGGAGCTACAGCACCACTGTGCTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp TCACTCAGGAATACTGTTAGGCCAGCTGCGGAGTCATTGGCAAACTaGAGCAACAGGCCAGCGGACTCCCGAGTGCGGAGAAGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: SLRNTVRPAAESLAN*SNRPADSRVRRRKD
Trigger: GTCTTTCCTTCTCCGCACTCGGGAGTCCGCTGGCCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTGGCCTAACAGTATTCCTGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 90 bp TGCTGGGCACACGTAGGCCCCGTGAAATTGGCAGGGCAGGTACAGTaGAAGTCATTCCAGGTGACGAGGCAAGTCCCACCATTGAAACAG +
Preference number: 5 (lower is better)
Translates to: CWAHVGPVKLAGQVQ*KSFQVTRQVPPLKQ
Trigger: CTGTTTCAATGGTGGGACTTGCCTCGTCACCTGGAATGACTTCCACTGTACCTGCCCTGCCAATTTCACGGGGCCTACGTGTGCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS-3UTR CAA 90 bp TCCTCATCCCAGAAGGACACCCAGACGGTCCTTCCCATCAGACGGCAGTTGAAGCTGGAAGCAGCTTCCTaGGGTCTCCAGGTAGAAACC +
Preference number: 5 (lower is better)
Translates to: SSSQKDTQTVLPIRRQLKLEAAS*GLQVET
Trigger: GGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCCAG...CTTCAACTGCCGTCTGATGGGAAGGACCGTCTGGGTGTCCTTCTGGGATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp CCCTGTGAGGTAGGCAGTGGGTGCCTTCCCCCTTTGACAAATGACCACAGCAGGCCGGAGAATCTGGCATaGCAGATACATTCAGACACC +
Preference number: 5 (lower is better)
Translates to: PCEVGSGCLPPLTNDHSRPENLA*QIHSDT
Trigger: GGTGTCTGAATGTATCTGCAATGCCAGATTCTCCGG...CCTGCTGTGGTCATTTGTCAAAGGGGGAAGGCACCCACTGCCTACCTCACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp AAACACGGCAGACACGCCCTGGAGCCATGTCAGGACACACTCACACTAGCATCTCCCATCAGACGGCAGTaGAAGACTTCCAGATTCTTT +
Preference number: 5 (lower is better)
Translates to: KHGRHALEPCQDTLTLASPIRRQ*KTSRFF
Trigger: AAAGAATCTGGAAGTCTTCAACTGCCGTCTGATGGG...AGATGCTAGTGTGAGTGTGTCCTGACATGGCTCCAGGGCGTGTCTGCCGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373631.8
CDS-3UTR CAA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCTTTCCTTGGTGTCATaGCGAGTGGCCAAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTLSLVS*RVAKVP
Trigger: TGGGACCTTGGCCACTCGCAATGACACCAAGGAAAG...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CAA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCTGGAAGCAGCTTCCTaGGGTCTCCAGGTAGAAACC +
Preference number: 5 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTLEAAS*GLQVET
Trigger: GGTTTCTACCTGGAGACCCAAGGAAGCTGCTTCCAG...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS-3UTR CAA 90 bp CATTTCGACCCGAGCTCTCATTTCCTATTTGTGAAGGGTCAGACACAGTCTACCCCGGAGAATCTGGCATaGCAGATACATTCAGACACC +
Preference number: 5 (lower is better)
Translates to: HFDPSSHFLFVKGQTQSTPENLA*QIHSDT
Trigger: GGTGTCTGAATGTATCTGCAATGCCAGATTCTCCGG...GGTAGACTGTGTCTGACCCTTCACAAATAGGAAATGAGAGCTCGGGTCGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS GCA 72 bp GTGGCCGCCGGGCGCTCCATGGCCAGACGCACGCGGTaGCAGGCACCATCGGCCACGCGCGGCCCCGGTATG +
Preference number: 6 (lower is better)
Translates to: VAAGRSMARRTR*QAPSATRGPGM
Trigger: CATACCGGGGCCGCGCGTGGCCGATGGTGCCTGGCACCGCGTGCGTCTGGCCATGGAGCGCCCGGCGGCCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp GGTGCCAGGCACCATCGGCCACGCGCGGCCCCGGTATaGGCAGCACAGCGCCGGGCAGGCCATGGCCTCCGC +
Preference number: 6 (lower is better)
Translates to: GARHHRPRAAPV*AAQRRAGHGLR
Trigger: GCGGAGGCCATGGCCTGCCCGGCGCTGTGCTGCCCATACCGGGGCCGCGCGTGGCCGATGGTGCCTGGCACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp CCGCGGCACGCAGCAGCCAGGCCTCGGAGTCGCGCGTaGGAAAGGCCAGCGACAGGCCGCCGAGCAAGCGCC +
Preference number: 6 (lower is better)
Translates to: PRHAAARPRSRA*ERPATGRRASA
Trigger: GGCGCTTGCTCGGCGGCCTGTCGCTGGCCTTTCGCACGCGCGACTCCGAGGCCTGGCTGCTGCGTGCCGCGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp GCAGCCAGCGCGAGGTGGTGGCCGCCGGGCGCTCCATaGCCAGACGCACGCGGTGCCAGGCACCATCGGCCA +
Preference number: 6 (lower is better)
Translates to: AASARWWPPGAP*PDARGARHHRP
Trigger: TGGCCGATGGTGCCTGGCACCGCGTGCGTCTGGCCATGGAGCGCCCGGCGGCCACCACCTCGCGCTGGCTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp CCAGGTCACTGGCCAGGCCGCGCAGCGCCACCGGGGTaGCGGCACCATCCAGCCACAGCAGCCAGCGCGAGG +
Preference number: 6 (lower is better)
Translates to: PGHWPGRAAPPG*RHHPATAASAR
Trigger: CCTCGCGCTGGCTGCTGTGGCTGGATGGTGCCGCCACCCCGGTGGCGCTGCGCGGCCTGGCCAGTGACCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp GGCCTGGCCAGCGCCATGGCAGCCCGCTCTGCGCTCTaGTCGGCTGCTGTGAGAACGGGAGGGCGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: GLASAMAARSAL*SAAVRTGGRPG
Trigger: GCCAGGCCGCCCTCCCGTTCTCACAGCAGCCGAGCAGAGCGCAGAGCGGGCTGCCATGGCGCTGGCCAGGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS CCA 72 bp CGGCACCATCCAGCCACAGCAGCCAGCGCGAGGTGGTaGCCGCCGGGCGCTCCATGGCCAGACGCACGCGGT +
Preference number: 6 (lower is better)
Translates to: RHHPATAASARW*PPGAPWPDARG
Trigger: ACCGCGTGCGTCTGGCCATGGAGCGCCCGGCGGCCACCACCTCGCGCTGGCTGCTGTGGCTGGATGGTGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp TGGCGGCACCATCCAGCCACAGCAGCCAGCGCGAGGTaGTGGCCGCCGGGCGCTCCATGGCCAGACGCACGC +
Preference number: 6 (lower is better)
Translates to: WRHHPATAASAR*WPPGAPWPDAR
Trigger: GCGTGCGTCTGGCCATGGAGCGCCCGGCGGCCACCACCTCGCGCTGGCTGCTGTGGCTGGATGGTGCCGCCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 72 bp CCATGGCAGCCCGCTCTGCGCTCTGCTCGGCTGCTGTaGGAACGGGAGGGCGGCCTGGCTGGCTCCGCACCC +
Preference number: 6 (lower is better)
Translates to: PWQPALRSARLL*EREGGLAGSAP
Trigger: GGGTGCGGAGCCAGCCAGGCCGCCCTCCCGTTCTCACAGCAGCCGAGCAGAGCGCAGAGCGGGCTGCCATGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359999.7
CDS GCA 72 bp CCGATGCGCACTCCAGCACCTCCCGCTCGCAGTGCGTaGCCTCGTAGCCGGTGCCCGCGCAGTCGCACCGGA +
Preference number: 6 (lower is better)
Translates to: PMRTPAPPARSA*PRSRCPRSRTG
Trigger: TCCGGTGCGACTGCGCGGGCACCGGCTACGAGGGCACGCACTGCGAGCGGGAGGTGCTGGAGTGCGCATCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS TCA 72 bp GCAGGCCGCCCAGCGCCACGCGGCCCAAGCAGCCGGTaGAGTTCTCAGCCAGCAGGATGCGCACAGCACCCG +
Preference number: 6 (lower is better)
Translates to: AGRPAPRGPSSR*SSQPAGCAQHP
Trigger: CGGGTGCTGTGCGCATCCTGCTGGCTGAGAACTTCACCGGCTGCTTGGGCCGCGTGGCGCTGGGCGGCCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp CTCGAGGCAGGACGCGTTGTGCTCGCAGGGCGCCGATaGGCACTCCAGCACCTCCCGCTCGCAGTGCGTGCC +
Preference number: 6 (lower is better)
Translates to: LEAGRVVLAGRR*ALQHLPLAVRA
Trigger: GGCACGCACTGCGAGCGGGAGGTGCTGGAGTGCGCATCGGCGCCCTGCGAGCACAACGCGTCCTGCCTCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 72 bp CGGAAGCTCCCGAGGCCCTCGAGGCAGGACGCGTTGTaGTCGCAGGGCGCCGATGCGCACTCCAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: RKLPRPSRQDAL*SQGADAHSSTS
Trigger: GGAGGTGCTGGAGTGCGCATCGGCGCCCTGCGAGCACAACGCGTCCTGCCTCGAGGGCCTCGGGAGCTTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 72 bp GCAAAGGCGTCGAAGAGGTCACGGCAGGCACCGTCGTaGAGACAGGGCGAGGGCGCACACACGGGCGCGCCG +
Preference number: 6 (lower is better)
Translates to: AKASKRSRQAPS*RQGEGAHTGAP
Trigger: CGGCGCGCCCGTGTGTGCGCCCTCGCCCTGTCTGCACGACGGTGCCTGCCGTGACCTCTTCGACGCCTTTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp TCCTGGAGGCAGCCTCGGAAGGGCCCACCCCAGGGCTaGCTGTCGGCAGCAAGGAGCCTCCCACCCACGTGC +
Preference number: 6 (lower is better)
Translates to: SWRQPRKGPPQG*LSAARSLPPTC
Trigger: GCACGTGGGTGGGAGGCTCCTTGCTGCCGACAGCCAGCCCTGGGGTGGGCCCTTCCGAGGCTGCCTCCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CAA 90 bp CAACAGAGGCAGCGGAAGCTCCCGAGGCCCTCGAGGCAGGACGCGTaGTGCTCGCAGGGCGCCGATGCGCACTCCAGCACCTCCCGCTCG +
Preference number: 6 (lower is better)
Translates to: QQRQRKLPRPSRQDA*CSQGADAHSSTSRS
Trigger: CGAGCGGGAGGTGCTGGAGTGCGCATCGGCGCCCTGCGAGCACAACGCGTCCTGCCTCGAGGGCCTCGGGAGCTTCCGCTGCCTCTGTTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 72 bp AGGGCCGGGTCAGAGCGCTGCAGGCATCGGCCCCCATaGTGGCAGGGGCTCGATGCACACTCGTCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: RAGSERCRHRPP*WQGLDAHSSSS
Trigger: GGACGAGGACGAGTGTGCATCGAGCCCCTGCCAGCATGGGGGCCGATGCCTGCAGCGCTCTGACCCGGCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 72 bp TTCTCAGCCAGCAGGATGCGCACAGCACCCGGGCCCTaGAGGAAGCCCAGGTCACTGGCCAGGCCGCGCAGC +
Preference number: 6 (lower is better)
Translates to: FSASRMRTAPGP*RKPRSLARPRS
Trigger: GCTGCGCGGCCTGGCCAGTGACCTGGGCTTCCTGCAGGGCCCGGGTGCTGTGCGCATCCTGCTGGCTGAGAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp TCGTGGCACGTGCCCCCATGTGCGCACGGCTGGCTCTaGCACTCGTCGAGGTCCAGCTGGCAACGGGTGCCC +
Preference number: 6 (lower is better)
Translates to: SWHVPPCAHGWL*HSSRSSWQRVP
Trigger: GGGCACCCGTTGCCAGCTGGACCTCGACGAGTGCCAGAGCCAGCCGTGCGCACATGGGGGCACGTGCCACGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 72 bp CAAGGGGGCAATGGCACTCGTAGCGATCGGCCAGGTTaGGGCAGGTGGCCCCATGGTGGCACGGCCGGGATG +
Preference number: 6 (lower is better)
Translates to: QGGNGTRSDRPG*GRWPHGGTAGM
Trigger: CATCCCGGCCGTGCCACCATGGGGCCACCTGCCGCAACCTGGCCGATCGCTACGAGTGCCATTGCCCCCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS GCA 72 bp CTGTCGGCAGCAAGGAGCCTCCCACCCACGTGCACGTaGTGCCCCAGGTCCTGCAGCTGGTCAGGCCCGAAG +
Preference number: 6 (lower is better)
Translates to: LSAARSLPPTCT*CPRSCSWSGPK
Trigger: CTTCGGGCCTGACCAGCTGCAGGACCTGGGGCAGCACGTGCACGTGGGTGGGAGGCTCCTTGCTGCCGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp ACCCGGCACGCAGTAGCAGCGGAAGCCGGTGGGATCTaGACCCTGGGGCACACACAGAGCGCCGTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: TRHAVAAEAGGI*TLGHTQSAVVA
Trigger: TGCCACCACGGCGCTCTGTGTGTGCCCCAGGGTCCAGATCCCACCGGCTTCCGCTGCTACTGCGTGCCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS CCA 72 bp GGGACCTCCTCACACGTGGCAGGTGGGAGACAGGGCTaGCCGGGACACCACAGCTGCTGGGCACACGTAGGC +
Preference number: 6 (lower is better)
Translates to: GTSSHVAGGRQG*PGHHSCWAHVG
Trigger: GCCTACGTGTGCCCAGCAGCTGTGGTGTCCCGGCCAGCCCTGTCTCCCACCTGCCACGTGTGAGGAGGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 72 bp CAGGACTGCACATGTCCTCGGAGACGCAGCCCGCAGTaGGGTTCCAGGACTGCCTGCCGCCGAGCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: QDCTCPRRRSPQ*GSRTACRRARW
Trigger: CCAGCGAGCTCGGCGGCAGGCAGTCCTGGAACCTCACTGCGGGCTGCGTCTCCGAGGACATGTGCAGTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 72 bp CTCAGACTGGCGGCGCTTTCGGGCTGCCAGGATCCCTaGAAGGAGGCCCAGGAGGAGGAGGAGGAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: LRLAALSGCQDP*KEAQEEEEEAG
Trigger: GCCTGCCTCCTCCTCCTCCTCCTGGGCCTCCTTTCAGGGATCCTGGCAGCCCGAAAGCGCCGCCAGTCTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp CAGCTGGGCAGAGGAGATCCCGGCAGGCAGCGGAGTTaGCGAAGCCGTGGAAGCCAGGGCCACAGGACCAGA +
Preference number: 6 (lower is better)
Translates to: QLGRGDPGRQRS*RSRGSQGHRTR
Trigger: TCTGGTCCTGTGGCCCTGGCTTCCACGGCTTCGGCAACTCCGCTGCCTGCCGGGATCTCCTCTGCCCAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp AGCCTCCCACCCACGTGCACGTGCTGCCCCAGGTCCTaGAGCTGGTCAGGCCCGAAGCTGAGCATCACCAGG +
Preference number: 6 (lower is better)
Translates to: SLPPTCTCCPRS*SWSGPKLSITR
Trigger: CCTGGTGATGCTCAGCTTCGGGCCTGACCAGCTGCAGGACCTGGGGCAGCACGTGCACGTGGGTGGGAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp CCTGGAAACCCGGCACGCAGTAGCAGCGGAAGCCGGTaGGATCTGGACCCTGGGGCACACACAGAGCGCCGT +
Preference number: 6 (lower is better)
Translates to: PGNPARSSSGSR*DLDPGAHTERR
Trigger: ACGGCGCTCTGTGTGTGCCCCAGGGTCCAGATCCCACCGGCTTCCGCTGCTACTGCGTGCCGGGTTTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS TCA 72 bp GCTGCCCCAGGTCCTGCAGCTGGTCAGGCCCGAAGCTaGGCATCACCAGGTGACGGAGCCCATCATCCCAGC +
Preference number: 6 (lower is better)
Translates to: AAPGPAAGQARS*ASPGDGAHHPS
Trigger: GCTGGGATGATGGGCTCCGTCACCTGGTGATGCTCAGCTTCGGGCCTGACCAGCTGCAGGACCTGGGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp CAGGACCCTCCGTGGACACAAGGCAGAGGCCGGCACTaGTCTCGGCGCTCACAGCCCAGGAGGACGTTCTCA +
Preference number: 6 (lower is better)
Translates to: QDPPWTQGRGRH*SRRSQPRRTFS
Trigger: TGAGAACGTCCTCCTGGGCTGTGAGCGCCGAGAGCAGTGCCGGCCTCTGCCTTGTGTCCACGGAGGGTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp CATCATCCCAGCGCCCAGGGAGCACTACAGCAGGACTaGCCGGCACCTCAGCCCGGATCCGACCCTCACTCA +
Preference number: 6 (lower is better)
Translates to: HHPSAQGALQQD*PAPQPGSDPHS
Trigger: TGAGTGAGGGTCGGATCCGGGCTGAGGTGCCGGGCAGTCCTGCTGTAGTGCTCCCTGGGCGCTGGGATGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp TCCTCGGAGACGCAGCCCGCAGTGAGGTTCCAGGACTaGCTGCCGCCGAGCTCGCTGGGCTGGCTTGAGTTA +
Preference number: 6 (lower is better)
Translates to: SSETQPAVRFQD*LPPSSLGWLEL
Trigger: TAACTCAAGCCAGCCCAGCGAGCTCGGCGGCAGGCAGTCCTGGAACCTCACTGCGGGCTGCGTCTCCGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp CCAGGAAGGTCCACAGAGCCCCCGGCTCCATTGCCATaGCCTCCAGACAGGTTGAGAGTGGTGGGCGGGCAC +
Preference number: 6 (lower is better)
Translates to: PGRSTEPPAPLP*PPDRLRVVGGH
Trigger: GTGCCCGCCCACCACTCTCAACCTGTCTGGAGGGCATGGCAATGGAGCCGGGGGCTCTGTGGACCTTCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460253.1
CDS TCA 72 bp TGCAGCTGGTCAGGCCCGAAGCTGAGCATCACCAGGTaGCGGAGCCCATCATCCCAGCGCCCAGGGAGCACT +
Preference number: 6 (lower is better)
Translates to: CSWSGPKLSITR*RSPSSQRPGST
Trigger: AGTGCTCCCTGGGCGCTGGGATGATGGGCTCCGTCACCTGGTGATGCTCAGCTTCGGGCCTGACCAGCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp TGTCATTGCGAGTGGCCAAGGTCCCAGCGGGCAGTGTaGTGCGAAACCTCAGTGCCAGACCCAGGGGGCCAC +
Preference number: 6 (lower is better)
Translates to: CHCEWPRSQRAV*CETSVPDPGGH
Trigger: GTGGCCCCCTGGGTCTGGCACTGAGGTTTCGCACCACACTGCCCGCTGGGACCTTGGCCACTCGCAATGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 72 bp CCTCAGTGCCAGACCCAGGGGGCCACCAGCTGGCACTaGTGCCTGAATGGGGCTCCCAGCCATCACAGAGAA +
Preference number: 6 (lower is better)
Translates to: PQCQTQGATSWH*CLNGAPSHHRE
Trigger: TTCTCTGTGATGGCTGGGAGCCCCATTCAGGCATCAGTGCCAGCTGGTGGCCCCCTGGGTCTGGCACTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp CTGGGCACCTGCAGATATAGCCTGCCACAGTGTCACTaGAGGTTCCGCCGTGCAGGCAGGGATCCGACAGGC +
Preference number: 6 (lower is better)
Translates to: LGTCRYSLPQCH*RFRRAGRDPTG
Trigger: GCCTGTCGGATCCCTGCCTGCACGGCGGAACCTGCAGTGACACTGTGGCAGGCTATATCTGCAGGTGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp ACACCGCAGTCGGCTCCCTCAAAGCCAGGAGGGCAGTaGCACAGGAAACCCGCAGCATGGCGGAAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: TPQSAPSKPGGQ*HRKPAAWRKLK
Trigger: CTTCAGCTTCCGCCATGCTGCGGGTTTCCTGTGCCACTGCCCTCCTGGCTTTGAGGGAGCCGACTGCGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359999.7
ENST00000373631.8
CDS CCA 72 bp AGGAGGCAGAGCTTGGGGCGCCTCCCAAGCCAAAGGTaGCAGCAGGAATCTCATCAGCGCACGTGGGACCTC +
Preference number: 6 (lower is better)
Translates to: RRQSLGRLPSQR*QQESHQRTWDL
Trigger: GAGGTCCCACGTGCGCTGATGAGATTCCTGCTGCCACCTTTGGCTTGGGAGGCGCCCCAAGCTCTGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp GAGGACCAGGGAAGGGAAGCGACTCATCCACAGACCTaGCAGACTTCTCTGCCCCACCATAGCCCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: EDQGREATHPQT*QTSLPHHSPRG
Trigger: CCCCCTGGGGCTATGGTGGGGCAGAGAAGTCTGCCAGGTCTGTGGATGAGTCGCTTCCCTTCCCTGGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359999.7
CDS CCA 72 bp GCAGCTGCAGTTGGCAGCGGGAGAGCCACCCTCACATaGGCTGCCATCGAGGCAGGTGACATTCAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: AAAVGSGRATLT*AAIEAGDIQAA
Trigger: TGCAGCCTGAATGTCACCTGCCTCGATGGCAGCCCATGTGAGGGTGGCTCTCCCGCTGCCAACTGCAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp AGCTCCAGGGTCGCTAGATGGAGCACAACCTCCACCTaGTGCCAATGGCCATCGTTTAGGGCCAGGTCCGGC +
Preference number: 6 (lower is better)
Translates to: SSRVARWSTTST*CQWPSFRARSG
Trigger: GCCGGACCTGGCCCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp CCCTCATGCCAGAGCCGTAGCTCCAGGGTCGCTAGATaGAGCACAACCTCCACCTGGTGCCAATGGCCATCG +
Preference number: 6 (lower is better)
Translates to: PSCQSRSSRVAR*STTSTWCQWPS
Trigger: CGATGGCCATTGGCACCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGAGCTACGGCTCTGGCATGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp AGGTTCCAGGACTGCCTGCCGCCGAGCTCGCTGGGCTaGCTTGAGTTATCCAGTGGCAGAGGAAAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: RFQDCLPPSSLG*LELSSGRGKKG
Trigger: CCCCTTCTTTCCTCTGCCACTGGATAACTCAAGCCAGCCCAGCGAGCTCGGCGGCAGGCAGTCCTGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CAA 90 bp AGGCCAGCGGACTCCCGAGTGCGGAGAAGGAAAGACACTGTGAGGTaGGGACCTGGCAGCTCTTGGAGCAGAAAGGAGGCAGAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RPADSRVRRRKDTVR*GPGSSWSRKEAELG
Trigger: CCCAAGCTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCTTCTCCGCACTCGGGAGTCCGCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CAA 90 bp TGGCCGGGACACCACAGCTGCTGGGCACACGTAGGCCCCGTGAAATaGGCAGGGCAGGTACAGTGGAAGTCATTCCAGGTGACGAGGCAA +
Preference number: 6 (lower is better)
Translates to: WPGHHSCWAHVGPVK*AGQVQWKSFQVTRQ
Trigger: TTGCCTCGTCACCTGGAATGACTTCCACTGTACCTGCCCTGCCAATTTCACGGGGCCTACGTGTGCCCAGCAGCTGTGGTGTCCCGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 72 bp GGACCTCTATGGGGCCGGGCACAGTCGCAACGGAAATaGGTCCACAGATCCACACAGGACCCTCCGTGGACA +
Preference number: 6 (lower is better)
Translates to: GPLWGRAQSQRK*VHRSTQDPPWT
Trigger: TGTCCACGGAGGGTCCTGTGTGGATCTGTGGACTCATTTCCGTTGCGACTGTGCCCGGCCCCATAGAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 72 bp GAGAGCCACCCTCACATGGGCTGCCATCGAGGCAGGTaGCATTCAGGCTGCACTCCTTGGATGGGACAGGCA +
Preference number: 6 (lower is better)
Translates to: ESHPHMGCHRGR*HSGCTPWMGQA
Trigger: TGCCTGTCCCATCCAAGGAGTGCAGCCTGAATGTCACCTGCCTCGATGGCAGCCCATGTGAGGGTGGCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS GCA 72 bp TCCAGGGTCGCTAGATGGAGCACAACCTCCACCTGGTaGCAATGGCCATCGTTTAGGGCCAGGTCCGGCAGT +
Preference number: 6 (lower is better)
Translates to: SRVARWSTTSTW*QWPSFRARSGS
Trigger: ACTGCCGGACCTGGCCCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCTCCATCTAGCGACCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp GTCGCTAGATGGAGCACAACCTCCACCTGGTGCCAATaGCCATCGTTTAGGGCCAGGTCCGGCAGTCTCAGG +
Preference number: 6 (lower is better)
Translates to: VARWSTTSTWCQ*PSFRARSGSLR
Trigger: CCTGAGACTGCCGGACCTGGCCCTAAACGATGGCCATTGGCACCAGGTGGAGGTTGTGCTCCATCTAGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp ACCTGGCAGCTCTTGGAGCAGAAAGGAGGCAGAGCTTaGGGCGCCTCCCAAGCCAAAGGTGGCAGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: TWQLLEQKGGRA*GASQAKGGSRN
Trigger: ATTCCTGCTGCCACCTTTGGCTTGGGAGGCGCCCCAAGCTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp AGGAAAGACACTGTGAGGTTGGGACCTGGCAGCTCTTaGAGCAGAAAGGAGGCAGAGCTTGGGGCGCCTCCC +
Preference number: 6 (lower is better)
Translates to: RKDTVRLGPGSS*SRKEAELGAPP
Trigger: GGGAGGCGCCCCAAGCTCTGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CAA 90 bp AGTGTGGCTGCCACCAATGCCAGCTCCAAGCTTTCCTTGGTGTCATaGCGAGTGGCCAAGGTCCCAGCGGGCAGTGTGGTGCGAAACCTC +
Preference number: 6 (lower is better)
Translates to: SVAATNASSKLSLVS*RVAKVPAGSVVRNL
Trigger: GAGGTTTCGCACCACACTGCCCGCTGGGACCTTGGCCACTCGCAATGACACCAAGGAAAGCTTGGAGCTGGCATTGGTGGCAGCCACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS TCA 72 bp CAGCGGACTCCCGAGTGCGGAGAAGGAAAGACACTGTaGGGTTGGGACCTGGCAGCTCTTGGAGCAGAAAGG +
Preference number: 6 (lower is better)
Translates to: QRTPECGEGKTL*GWDLAALGAER
Trigger: CCTTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCTTCTCCGCACTCGGGAGTCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp GGTATTCTGGCCACAGAACGGTCCATGGGTACCAGGTaGGCAGTGGCAGACGTAACTGTGGACCCCAGACTC +
Preference number: 6 (lower is better)
Translates to: GILATERSMGTR*AVADVTVDPRL
Trigger: GAGTCTGGGGTCCACAGTTACGTCTGCCACTGCCCACCTGGTACCCATGGACCGTTCTGTGGCCAGAATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp ATGCCAGCTCCAAGCTTTCCTTGGTGTCATTGCGAGTaGCCAAGGTCCCAGCGGGCAGTGTGGTGCGAAACC +
Preference number: 6 (lower is better)
Translates to: MPAPSFPWCHCE*PRSQRAVWCET
Trigger: GGTTTCGCACCACACTGCCCGCTGGGACCTTGGCCACTCGCAATGACACCAAGGAAAGCTTGGAGCTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp TTAGGGCCAGGTCCGGCAGTCTCAGGACAAGCACAGTaGTGCTGTAGCTCCAGAGTGTGGCCTGAAGTGTGG +
Preference number: 6 (lower is better)
Translates to: LGPGPAVSGQAQ*CCSSRVWPEVW
Trigger: CCACACTTCAGGCCACACTCTGGAGCTACAGCACCACTGTGCTTGTCCTGAGACTGCCGGACCTGGCCCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CAA 90 bp ATCCGACCCTCACTCAGGAATACTGTTAGGCCAGCTGCGGAGTCATaGGCAAACTGGAGCAACAGGCCAGCGGACTCCCGAGTGCGGAGA +
Preference number: 6 (lower is better)
Translates to: IRPSLRNTVRPAAES*ANWSNRPADSRVRR
Trigger: TCTCCGCACTCGGGAGTCCGCTGGCCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTGGCCTAACAGTATTCCTGAGTGAGGGTCGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp AATACTGTTAGGCCAGCTGCGGAGTCATTGGCAAACTaGAGCAACAGGCCAGCGGACTCCCGAGTGCGGAGA +
Preference number: 6 (lower is better)
Translates to: NTVRPAAESLAN*SNRPADSRVRR
Trigger: TCTCCGCACTCGGGAGTCCGCTGGCCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTGGCCTAACAGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp CACTCAGGAATACTGTTAGGCCAGCTGCGGAGTCATTaGCAAACTGGAGCAACAGGCCAGCGGACTCCCGAG +
Preference number: 6 (lower is better)
Translates to: HSGILLGQLRSH*QTGATGQRTPE
Trigger: CTCGGGAGTCCGCTGGCCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTGGCCTAACAGTATTCCTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp CACGTAGGCCCCGTGAAATTGGCAGGGCAGGTACAGTaGAAGTCATTCCAGGTGACGAGGCAAGTCCCACCA +
Preference number: 6 (lower is better)
Translates to: HVGPVKLAGQVQ*KSFQVTRQVPP
Trigger: TGGTGGGACTTGCCTCGTCACCTGGAATGACTTCCACTGTACCTGCCCTGCCAATTTCACGGGGCCTACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp AGCGGCAGGGGCAGGCCCTTCGCCACTTCACAGAACTaGCCGGAGAATCTGGCATTGCAGATACATTCAGAC +
Preference number: 6 (lower is better)
Translates to: SGRGRPFATSQN*PENLALQIHSD
Trigger: GTCTGAATGTATCTGCAATGCCAGATTCTCCGGCCAGTTCTGTGAAGTGGCGAAGGGCCTGCCCCTGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS CAA 72 bp GACTCCCGAGTGCGGAGAAGGAAAGACACTGTGAGGTaGGGACCTGGCAGCTCTTGGAGCAGAAAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: DSRVRRRKDTVR*GPGSSWSRKEA
Trigger: TGCCTCCTTTCTGCTCCAAGAGCTGCCAGGTCCCAACCTCACAGTGTCTTTCCTTCTCCGCACTCGGGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp ATGCCTGAATGGGGCTCCCAGCCATCACAGAGAAGGTaGTATTCTGGCCACAGAACGGTCCATGGGTACCAG +
Preference number: 6 (lower is better)
Translates to: MPEWGSQPSQRR*YSGHRTVHGYQ
Trigger: CTGGTACCCATGGACCGTTCTGTGGCCAGAATACCACCTTCTCTGTGATGGCTGGGAGCCCCATTCAGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CCA 72 bp GGCCCTTCGCCACTTCACAGAACTGGCCGGAGAATCTaGCATTGCAGATACATTCAGACACCCCTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: GPSPLHRTGRRI*HCRYIQTPLQL
Trigger: CAGCTGGAGGGGTGTCTGAATGTATCTGCAATGCCAGATTCTCCGGCCAGTTCTGTGAAGTGGCGAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373631.8
ENST00000460253.1
CDS CAA 72 bp TCACTCAGGAATACTGTTAGGCCAGCTGCGGAGTCATaGGCAAACTGGAGCAACAGGCCAGCGGACTCCCGA +
Preference number: 6 (lower is better)
Translates to: SLRNTVRPAAES*ANWSNRPADSR
Trigger: TCGGGAGTCCGCTGGCCTGTTGCTCCAGTTTGCCAATGACTCCGCAGCTGGCCTAACAGTATTCCTGAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1
CDS CAA 72 bp TGGAAGTCATTCCAGGTGACGAGGCAAGTCCCACCATaGAAACAGGGGTCAGGACTGCACATGTCCTCGGAG +
Preference number: 6 (lower is better)
Translates to: WKSFQVTRQVPP*KQGSGLHMSSE
Trigger: CTCCGAGGACATGTGCAGTCCTGACCCCTGTTTCAATGGTGGGACTTGCCTCGTCACCTGGAATGACTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359999.7
ENST00000373631.8
ENST00000460253.1