RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134376

Ensembl transcript IDs: ENST00000367397.1, ENST00000367399.6, ENST00000367400.8, ENST00000448952.1, ENST00000475659.1, ENST00000476483.1, ENST00000480086.2, ENST00000484075.5, ENST00000535699.5, ENST00000538660.5, ENST00000638467.1, ENST00000681519.1

Found 996 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTaGAGGGGGTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCTC +
Preference number: 1 (lower is better)
Translates to: SPSRRDTMLLNQSLH*RGWHQVPHFHSGAL
Trigger: GAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCACCCCCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR CCA 90 bp CGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGCAGGGGGTaGCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTG +
Preference number: 1 (lower is better)
Translates to: RRDTMLLNQSLHCRG*HQVPHFHSGALLLL
Trigger: CAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCACCCCCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR TCA 90 bp GACGGCTGGGGCTGTAGGTTCCCTGAGTTGCCCTTTTGTTGGAGGTaGCAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGG +
Preference number: 1 (lower is better)
Translates to: DGWGCRFPELPFCWR*QQKQQWPARGSVTR
Trigger: CCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACCTACAGCCCCAGCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR CCA 90 bp AACTTGACAACCCTCAGGAGCCTGCCAAGCATTCTCGGTCTTGGGTaGGCCAGAGTGTTCACACCATCCATCATTCAAAACCTGCCAGGA +
Preference number: 1 (lower is better)
Translates to: NLTTLRSLPSILGLG*ARVFTPSIIQNLPG
Trigger: TCCTGGCAGGTTTTGAATGATGGATGGTGTGAACACTCTGGCCCACCCAAGACCGAGAATGCTTGGCAGGCTCCTGAGGGTTGTCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 90 bp GCAAAACTTGACAACCCTCAGGAGCCTGCCAAGCATTCTCGGTCTTaGGTGGGCCAGAGTGTTCACACCATCCATCATTCAAAACCTGCC +
Preference number: 1 (lower is better)
Translates to: AKLDNPQEPAKHSRS*VGQSVHTIHHSKPA
Trigger: GGCAGGTTTTGAATGATGGATGGTGTGAACACTCTGGCCCACCCAAGACCGAGAATGCTTGGCAGGCTCCTGAGGGTTGTCAAGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 90 bp TTCAGTTTATTAGGGGCACAAGGAGAGAGGCTGTATTTTGCCATCTaGAGTCTGCAGGGCAGACCTACATTCAGGCTATCAGGATCCTCA +
Preference number: 1 (lower is better)
Translates to: FSLLGAQGERLYFAI*SLQGRPTFRLSGSS
Trigger: TGAGGATCCTGATAGCCTGAATGTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCCCCTAATAAACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR TCA 90 bp GGGTTTTGGATGAGTTCCATGCATTGTGCCATTAGGCAGAAAGTGTaGCGTTCAACCAGGAAGCAACCCACCCTTGACAATAGTTGGATT +
Preference number: 1 (lower is better)
Translates to: GFWMSSMHCAIRQKV*RSTRKQPTLDNSWI
Trigger: AATCCAACTATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGGCACAATGCATGGAACTCATCCAAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 90 bp ACATCAAATAGAAGAGCAGAGGCTTTGAAGGCAGCTCAACCTTACTaGAGCAAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCT +
Preference number: 1 (lower is better)
Translates to: TSNRRAEALKAAQPY*SKRVDRPFIRHSTS
Trigger: AGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTTGCTGCAGTAAGGTTGAGCTGCCTTCAAAGCCTCTGCTCTTCTATTTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 90 bp ATAAATGTTCAGTTTATTAGGGGCACAAGGAGAGAGGCTGTATTTTaGCATCTGGAGTCTGCAGGGCAGACCTACATTCAGGCTATCAGG +
Preference number: 1 (lower is better)
Translates to: INVQFIRGTRREAVF*HLESAGQTYIQAIR
Trigger: CCTGATAGCCTGAATGTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCCCCTAATAAACTGAACATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 90 bp AGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTaGTTGCCACCTTATATAAATGTTCAGTTTATTAGGGGCACAAGG +
Preference number: 1 (lower is better)
Translates to: SGPCLHQCQCSRALV*LPPYINVQFIRGTR
Trigger: CCTTGTGCCCCTAATAAACTGAACATTTATATAAGGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 90 bp GTATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTaGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCT +
Preference number: 1 (lower is better)
Translates to: VCQRYLKYSHHIHSV*IPISKGHNAPKSVS
Trigger: AGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR CCA 90 bp GAACAGCAGAAACCCAGGTCCCTGTTGAATACATTGGTTGTGAAATaGGAAGAAAAAGTTTGCCTTATCTCTCTGGAACAGCACAGTCTT +
Preference number: 1 (lower is better)
Translates to: EQQKPRSLLNTLVVK*EEKVCLISLEQHSL
Trigger: AAGACTGTGCTGTTCCAGAGAGATAAGGCAAACTTTTTCTTCCCATTTCACAACCAATGTATTCAACAGGGACCTGGGTTTCTGCTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR TCA 90 bp GAAACAATGTGTGAGTGGCAGAGAAAAATAATCCAGGGTTTTGGATaGGTTCCATGCATTGTGCCATTAGGCAGAAAGTGTGACGTTCAA +
Preference number: 1 (lower is better)
Translates to: ETMCEWQRKIIQGFG*VPCIVPLGRKCDVQ
Trigger: TTGAACGTCACACTTTCTGCCTAATGGCACAATGCATGGAACTCATCCAAAACCCTGGATTATTTTTCTCTGCCACTCACACATTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR TCA 90 bp CACACCATCCATCATTCAAAACCTGCCAGGATGACACTATTAAGCTaGAGGTTTAACCAAGGCAGGAGAGAAGCCAATTTATTTGAGGAT +
Preference number: 1 (lower is better)
Translates to: HTIHHSKPARMTLLS*RFNQGRREANLFED
Trigger: ATCCTCAAATAAATTGGCTTCTCTCCTGCCTTGGTTAAACCTTCAGCTTAATAGTGTCATCCTGGCAGGTTTTGAATGATGGATGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 90 bp TTTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATaGTCAAGAGCATTAGTGTGGTTGCCACCTTATATAAATGTTCAG +
Preference number: 1 (lower is better)
Translates to: FRNQEKSGPCLHQCQ*SRALVWLPPYINVQ
Trigger: CTGAACATTTATATAAGGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR TCA 90 bp TTAATAAGTTGCAGAACCAAAATTGGTGCAACAGAAAGCAGAATGTaGCTCAAGGCTATCTCCTTTCATGCACATATAGACTTGGAATGC +
Preference number: 1 (lower is better)
Translates to: LISCRTKIGATESRM*LKAISFHAHIDLEC
Trigger: GCATTCCAAGTCTATATGTGCATGAAAGGAGATAGCCTTGAGTCACATTCTGCTTTCTGTTGCACCAATTTTGGTTCTGCAACTTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR TCA 90 bp GTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTGGAAAGATTaGAATCATTGGGATGCGAATTCTATAGCAAAGGCAAATAAATAT +
Preference number: 1 (lower is better)
Translates to: VVKMSEIKSSANWKD*NHWDANSIAKANKY
Trigger: ATATTTATTTGCCTTTGCTATAGAATTCGCATCCCAATGATTTCAATCTTTCCAGTTGGCAGATGACTTGATCTCCGACATTTTCACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
3UTR CCA 90 bp TTCAAATGTATGTTAATAATCTTCCTGTTCACCCCACTCAACAACTaGCTCGTCATTCATACGCAAAATGAGGTAAGAAAGAAGCTGAAA +
Preference number: 1 (lower is better)
Translates to: FKCMLIIFLFTPLNN*LVIHTQNEVRKKLK
Trigger: TTTCAGCTTCTTTCTTACCTCATTTTGCGTATGAATGACGAGCCAGTTGTTGAGTGGGGTGAACAGGAAGATTATTAACATACATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR TCA 90 bp TGTCTTCCTCTAACTACTCCATCACTTTCTCACCTATTTCTCTGTTaGACTAAACAGTCAACAATAGATACACATGTATTATCAGCATCA +
Preference number: 1 (lower is better)
Translates to: CLPLTTPSLSHLFLC*TKQSTIDTHVLSAS
Trigger: TGATGCTGATAATACATGTGTATCTATTGTTGACTGTTTAGTTCAACAGAGAAATAGGTGAGAAAGTGATGGAGTAGTTAGAGGAAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp GTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGTAGGTTCCCTGAGTTaGCCTTTTGTTGGAGGTGAC +
Preference number: 2 (lower is better)
Translates to: VASSSTFPLGSPPSPDGWVGSLS*PFVGGD
Trigger: GTCACCTCCAACAAAAGGGCAACTCAGGGAACCTAC...CCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR CAA 90 bp ATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATaGCAGGGGGTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: IPISKGHNAPKSVSP*QGVASSSTFPLGSP
Trigger: AGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCACCCCCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR CAA 90 bp CTTCTGGACTGGAGGGAGACTTCTCTGATTAGATCTGAGCAAAACTaGACAACCCTCAGGAGCCTGCCAAGCATTCTCGGTCTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: LLDWRETSLIRSEQN*TTLRSLPSILGLGW
Trigger: CCACCCAAGACCGAGAATGCTTGGCAGGCTCCTGAGGGTTGTCAAGTTTTGCTCAGATCTAATCAGAGAAGTCTCCCTCCAGTCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp AGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCTGTAGGTTGAAATCATTGGGATaGGAATTCTATAGCAAAGGC +
Preference number: 2 (lower is better)
Translates to: SSTFPLGSPPSPDGWGCRLKSLG*EFYSKG
Trigger: GCCTTTGCTATAGAATTCGCATCCCAATGATTTCAA...CCTACAGCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
3UTR-3UTR GCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTCAACCCTCAGGAGCCTaGCAAGCATTCTCGGTCTTG +
Preference number: 2 (lower is better)
Translates to: YVTNTLLRPWDRTATKAAQPSGA*QAFSVL
Trigger: CAAGACCGAGAATGCTTGGCAGGCTCCTGAGGGTTG...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACACTCTGCTAAGACCTTaGGATAGAACAGCAACTAAG +
Preference number: 2 (lower is better)
Translates to: GTRREAVFCHLESAGQTYTLLRP*DRTATK
Trigger: CTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACTTATCTTACCCTCGATaGTACATGAGATGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: GTRREAVFCHLESAGQTYLSYPR*YMRWKN
Trigger: GTTCTTCCATCTCATGTATCATCGAGGGTAAGATAA...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCACAGAAAGCAGAATGTaGCTCAAGGCTATCTCCTTT +
Preference number: 2 (lower is better)
Translates to: WAMPTPVSMLKSISVVATTESRM*LKAISF
Trigger: AAAGGAGATAGCCTTGAGTCACATTCTGCTTTCTGT...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACCAGAACCAAAATTGGTaGAACAGAAAGCAGAATGTG +
Preference number: 2 (lower is better)
Translates to: GTRREAVFCHLESAGQTYQNQNW*NRKQNV
Trigger: CACATTCTGCTTTCTGTTGCACCAATTTTGGTTCTG...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACCCATCATTCAAAACCTaGCAGGATGACACTATTAAG +
Preference number: 2 (lower is better)
Translates to: GTRREAVFCHLESAGQTYPSFKT*QDDTIK
Trigger: CTTAATAGTGTCATCCTGGCAGGTTTTGAATGATGG...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp ATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCGTAGGTTCCCTGAGTTaGCCTTTTGTTGGAGGTGAC +
Preference number: 2 (lower is better)
Translates to: IHSVWIPISKGHNAPKSVVGSLS*PFVGGD
Trigger: GTCACCTCCAACAAAAGGGCAACTCAGGGAACCTAC...GACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR GCA 90 bp AGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAATCAGTCTCTCCATTaGAGGGGGTGGCATCAAGTT +
Preference number: 2 (lower is better)
Translates to: SHHIHSVWIPISKGHNAPNQSLH*RGWHQV
Trigger: AACTTGATGCCACCCCCTGCAATGGAGAGACTGATT...AGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR CCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTAAGCATTCTCGGTCTTaGGTGGGCCAGAGTGTTCAC +
Preference number: 2 (lower is better)
Translates to: YVTNTLLRPWDRTATKAAKHSRS*VGQSVH
Trigger: GTGAACACTCTGGCCCACCCAAGACCGAGAATGCTT...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp GTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTGGCACATTCACAGTGTGTaGATCCCCATCTCGAAGGGA +
Preference number: 2 (lower is better)
Translates to: VTEPIVVKMSEIKSSANWHIHSV*IPISKG
Trigger: TCCCTTCGAGATGGGGATCCACACACTGTGAATGTG...CCAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448952.1
3UTR-3UTR CCA 90 bp ATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCCACATTCACAGTGTGTaGATCCCCATCTCGAAGGGA +
Preference number: 2 (lower is better)
Translates to: IHSVWIPISKGHNAPKSVHIHSV*IPISKG
Trigger: TCCCTTCGAGATGGGGATCCACACACTGTGAATGTG...GACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR GCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACAGCAGGTCACAGATTaGCTGAAGCCATTGACCAAC +
Preference number: 2 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTQQVTD*LKPLTN
Trigger: GTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTG...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACAATAATCCAGGGTTTTaGATGAGTTCCATGCATTGT +
Preference number: 2 (lower is better)
Translates to: GTRREAVFCHLESAGQTYNNPGF*MSSMHC
Trigger: ACAATGCATGGAACTCATCCAAAACCCTGGATTATT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTATTCTCGGTCTTGGGTaGGCCAGAGTGTTCACACCA +
Preference number: 2 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPILGLG*ARVFTP
Trigger: TGGTGTGAACACTCTGGCCCACCCAAGACCGAGAAT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCCACATTCACAGTGTGTaGATCCCCATCTCGAAGGGA +
Preference number: 2 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLHIHSV*IPISKG
Trigger: TCCCTTCGAGATGGGGATCCACACACTGTGAATGTG...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR TCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGAGACCTGTGTCTTTGTaGTGCAAAAGAGGCCAGCTA +
Preference number: 2 (lower is better)
Translates to: LETKRKVGHAYTSVNAQERPVSL*CKRGQL
Trigger: TAGCTGGCCTCTTTTGCATCACAAAGACACAGGTCT...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTATCCAGGGTTTTGGATaGGTTCCATGCATTGTGCCA +
Preference number: 2 (lower is better)
Translates to: YVTNTLLRPWDRTATKAAIQGFG*VPCIVP
Trigger: TGGCACAATGCATGGAACTCATCCAAAACCCTGGAT...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCATTTTCCAAGACAAGTaGCATCAAGTCTCAGGTAAA +
Preference number: 2 (lower is better)
Translates to: WAMPTPVSMLKSISVVATIFQDK*HQVSGK
Trigger: TTTACCTGAGACTTGATGTCACTTGTCTTGGAAAAT...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp GGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGTATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 2 (lower is better)
Translates to: GSLSCPFVGGDNRSNNGQYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...CTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR TCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCCCTTTTGTTGGAGGTaGCAACAGAAGCAACAATGG +
Preference number: 2 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIPFCWR*QQKQQW
Trigger: CCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR GCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACTCTCAGTTAATAAGTTaGAGAACCAAAATTGGTGCA +
Preference number: 2 (lower is better)
Translates to: GTRREAVFCHLESAGQTYSQLIS*RTKIGA
Trigger: TGCACCAATTTTGGTTCTGCAACTTATTAACTGAGA...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CAA 90 bp GGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTaGCCACCTTATATAAATGTTCAGTTTATTAGGGGCACAAGGAGA +
Preference number: 2 (lower is better)
Translates to: GPCLHQCQCSRALVW*PPYINVQFIRGTRR
Trigger: TCTCCTTGTGCCCCTAATAAACTGAACATTTATATAAGGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp GTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 2 (lower is better)
Translates to: VCGSPSRRDTMLLNQSLHYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...ATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR GCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTAATCCAAAGGGCACTTaGCAGGGAGCACTCACATAT +
Preference number: 2 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPNPKGT*QGALTY
Trigger: ATATGTGAGTGCTCCCTGGCAAGTGCCCTTTGGATT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp AGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTCAGTGTAATCCCAGTTaGAGATTAACATTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SHHIHSVWIPISKGHNAPQCNPS*RLTLSG
Trigger: ACCTGACAATGTTAATCTGCAACTGGGATTACACTG...AGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR CCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGAGCTCCTTATCCCTTTaGATACCAAGCATAGCTGAG +
Preference number: 2 (lower is better)
Translates to: LETKRKVGHAYTSVNAQESSLSL*IPSIAE
Trigger: CTCAGCTATGCTTGGTATCCAAAGGGATAAGGAGCT...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp GGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGCAGGAATATAATAAAACAATaGTGTCGAGCGGAACCACTG +
Preference number: 2 (lower is better)
Translates to: GSPSRRDTMLLNQSLHCRNIIKQ*CRAEPL
Trigger: CAGTGGTTCCGCTCGACACCATTGTTTTATTATATT...CCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTACCCTCGATGATACATaGGATGGAAGAACACCTTTC +
Preference number: 2 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPTLDDT*DGRTPF
Trigger: GAAAGGTGTTCTTCCATCTCATGTATCATCGAGGGT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGATGACACTATTAAGCTaGAGGTTTAACCAAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEMTLLS*RFNQGR
Trigger: CCTGCCTTGGTTAAACCTTCAGCTTAATAGTGTCAT...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCATTTCCCTAGGCCATaGGAGATAGCCCACTATTTT +
Preference number: 2 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPHFPRP*EIAHYF
Trigger: AAAATAGTGGGCTATCTCCCATGGCCTAGGGAAATG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGCACATTCACAGTGTGTaGATCCCCATCTCGAAGGGA +
Preference number: 2 (lower is better)
Translates to: ERVSVIATKATEDFILWKHIHSV*IPISKG
Trigger: TCCCTTCGAGATGGGGATCCACACACTGTGAATGTG...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATATAATAAAACAATaGTGTCGAGCGGAACCACTG +
Preference number: 2 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHNIIKQ*CRAEPL
Trigger: CAGTGGTTCCGCTCGACACCATTGTTTTATTATATT...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CCA 90 bp GGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGAAATATTCAGGACAATaGAACTACTCAGGAATGAAG +
Preference number: 2 (lower is better)
Translates to: GSLSCPFVGGDNRSNNGQKYSGQ*NYSGMK
Trigger: CTTCATTCCTGAGTAGTTCCATTGTCCTGAATATTT...CTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
3UTR-3UTR GCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCCAAAATGTAAAACTTaGACGTATGGGTCAGAGACT +
Preference number: 2 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEPKCKT*TYGSET
Trigger: AGTCTCTGACCCATACGTGCAAGTTTTACATTTTGG...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGAATTCCTGTATGAGGTaGAGAACAGTTGAAGAGTTT +
Preference number: 2 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMNSCMR*RTVEEF
Trigger: AAACTCTTCAACTGTTCTTCACCTCATACAGGAATT...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTAGAAGAGCAGAGGCTTTaGAGGCAGCTCAACCTTACT +
Preference number: 2 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLEEQRL*RQLNLT
Trigger: AGTAAGGTTGAGCTGCCTTCAAAGCCTCTGCTCTTC...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTGATACCAAGCATAGCTaGGACATTTTGTTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: YVTNTLLRPWDRTATKAADTKHS*DILFSF
Trigger: AAAGGAAAACAAAATGTCTCAGCTATGCTTGGTATC...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCATATAGACTTGGAATaGCTGTACCACAAAGAACCA +
Preference number: 2 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPHIDLE*LYHKEP
Trigger: TGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTAAGAGAGGCTGTATTTTaGCATCTGGAGTCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLREAVF*HLESAG
Trigger: CCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCT...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTAGAGAAAAGTGGGCCATaGCTACACCAGTGTCAATGC +
Preference number: 2 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLEKSGP*LHQCQC
Trigger: GCATTGACACTGGTGTAGGCATGGCCCACTTTTCTC...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTATTCAAGCAAGTCTCCTaGTTCACCCTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLFKQVS*FTLLSS
Trigger: GCTACTCAGGAGGGTGAAGCAGGAGACTTGCTTGAA...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAAATCAGTCTCTCCATTaGAGGGGGTGGCATCAAGTT +
Preference number: 2 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTNQSLH*RGWHQV
Trigger: AACTTGATGCCACCCCCTGCAATGGAGAGACTGATT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR CCA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTACTGCAGCAAACGTGTaGATAGGCCCTTTATACGTC +
Preference number: 2 (lower is better)
Translates to: KGHLPGSTHISIILLTMLTAANV*IGPLYV
Trigger: GACGTATAAAGGGCCTATCCACACGTTTGCTGCAGT...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTTTTGCCTTATCTCTCTaGAACAGCACAGTCTTATCT +
Preference number: 2 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPFALSL*NSTVLS
Trigger: AGATAAGACTGTGCTGTTCCAGAGAGATAAGGCAAA...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR TCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTTATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 2 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCAAGGCGACAGTCACTaGGCCAATAGTGGTGAAAAT +
Preference number: 2 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQQGDSH*ANSGEN
Trigger: ATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCTATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 2 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR GCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACACAGTGTAATCCCAGTTaGAGATTAACATTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTQCNPS*RLTLSG
Trigger: ACCTGACAATGTTAATCTGCAACTGGGATTACACTG...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR GCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCAGTGTAATCCCAGTTaGAGATTAACATTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVQCNPS*RLTLSG
Trigger: ACCTGACAATGTTAATCTGCAACTGGGATTACACTG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTAACATCACAGAGGCACTaGAATTTGTTGAGTAAGTCC +
Preference number: 2 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLTSQRH*NLLSKS
Trigger: GGACTTACTCAACAAATTCCAGTGCCTCTGTGATGT...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAAATATAATAAAACAATaGTGTCGAGCGGAACCACTG +
Preference number: 2 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTNIIKQ*CRAEPL
Trigger: CAGTGGTTCCGCTCGACACCATTGTTTTATTATATT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGAATATAATAAAACAATaGTGTCGAGCGGAACCACTG +
Preference number: 2 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMNIIKQ*CRAEPL
Trigger: CAGTGGTTCCGCTCGACACCATTGTTTTATTATATT...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR GCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCAGTGTAATCCCAGTTaGAGATTAACATTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQQCNPS*RLTLSG
Trigger: ACCTGACAATGTTAATCTGCAACTGGGATTACACTG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CCA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAATCAAGAGCATTAGTGTaGTTGCCACCTTATATAAAT +
Preference number: 2 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIESRALV*LPPYIN
Trigger: ATTTATATAAGGTGGCAACCACACTAATGCTCTTGA...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 72 bp GTGGCACAATCTTGGCTCATTGCAACGGCCGCCTCCTaGGTTCAAGCAAGTCTCCTGCTTCACCCTCCTGAG +
Preference number: 3 (lower is better)
Translates to: VAQSWLIATAAS*VQASLLLHPPE
Trigger: CTCAGGAGGGTGAAGCAGGAGACTTGCTTGAACCCAGGAGGCGGCCGTTGCAATGAGCCAAGATTGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 72 bp GACAACCCTCAGGAGCCTGCCAAGCATTCTCGGTCTTaGGTGGGCCAGAGTGTTCACACCATCCATCATTCA +
Preference number: 3 (lower is better)
Translates to: DNPQEPAKHSRS*VGQSVHTIHHS
Trigger: TGAATGATGGATGGTGTGAACACTCTGGCCCACCCAAGACCGAGAATGCTTGGCAGGCTCCTGAGGGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 72 bp CAGGGCAGACCTACATTCAGGCTATCAGGATCCTCATaGATCAGAGCCCTCAGGCTAAGGAAAAAGCCCACC +
Preference number: 3 (lower is better)
Translates to: QGRPTFRLSGSS*IRALRLRKKPT
Trigger: GGTGGGCTTTTTCCTTAGCCTGAGGGCTCTGATGCATGAGGATCCTGATAGCCTGAATGTAGGTCTGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 72 bp ACCCTCAGGAGCCTGCCAAGCATTCTCGGTCTTGGGTaGGCCAGAGTGTTCACACCATCCATCATTCAAAAC +
Preference number: 3 (lower is better)
Translates to: TLRSLPSILGLG*ARVFTPSIIQN
Trigger: GTTTTGAATGATGGATGGTGTGAACACTCTGGCCCACCCAAGACCGAGAATGCTTGGCAGGCTCCTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACAGATCTGAGCAAAACTaGACAACCCTCAGGAGCCTG +
Preference number: 3 (lower is better)
Translates to: GTRREAVFCHLESAGQTYRSEQN*TTLRSL
Trigger: CAGGCTCCTGAGGGTTGTCAAGTTTTGCTCAGATCT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR TCA 72 bp GGCTGTAGGTTCCCTGAGTTGCCCTTTTGTTGGAGGTaGCAACAGAAGCAACAATGGCCAGCAAGAGGATCA +
Preference number: 3 (lower is better)
Translates to: GCRFPELPFCWR*QQKQQWPARGS
Trigger: TGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACCTACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR GCA 72 bp CACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTaGAGGGCAGACCTACATTCAGGCTATCAGGATCCT +
Preference number: 3 (lower is better)
Translates to: HKERGCILPSGV*RADLHSGYQDP
Trigger: AGGATCCTGATAGCCTGAATGTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 72 bp CGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTaGAGGGGGTGGCATCAAGTTCCACATTTCCACTCG +
Preference number: 3 (lower is better)
Translates to: RRDTMLLNQSLH*RGWHQVPHFHS
Trigger: CGAGTGGAAATGTGGAACTTGATGCCACCCCCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR CCA 72 bp TTAGGGGCACAAGGAGAGAGGCTGTATTTTGCCATCTaGAGTCTGCAGGGCAGACCTACATTCAGGCTATCA +
Preference number: 3 (lower is better)
Translates to: LGAQGERLYFAI*SLQGRPTFRLS
Trigger: TGATAGCCTGAATGTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACCATGCACATATAGACTaGGAATGCCTGTACCACAAA +
Preference number: 3 (lower is better)
Translates to: GTRREAVFCHLESAGQTYHAHID*ECLYHK
Trigger: TTTGTGGTACAGGCATTCCAAGTCTATATGTGCATG...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 72 bp AGAAGAGCAGAGGCTTTGAAGGCAGCTCAACCTTACTaGAGCAAACGTGTGGATAGGCCCTTTATACGTCAC +
Preference number: 3 (lower is better)
Translates to: RRAEALKAAQPY*SKRVDRPFIRH
Trigger: GTGACGTATAAAGGGCCTATCCACACGTTTGCTGCAGTAAGGTTGAGCTGCCTTCAAAGCCTCTGCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 72 bp CAGTTTATTAGGGGCACAAGGAGAGAGGCTGTATTTTaGCATCTGGAGTCTGCAGGGCAGACCTACATTCAG +
Preference number: 3 (lower is better)
Translates to: QFIRGTRREAVF*HLESAGQTYIQ
Trigger: CTGAATGTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCCCCTAATAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTGAGAGAGGCTGTATTTaGCCATCTGGAGTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPERGCI*PSGVCR
Trigger: CCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTC...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCATCTCAGTTAATAAGTaGCAGAACCAAAATTGGTGC +
Preference number: 3 (lower is better)
Translates to: WAMPTPVSMLKSISVVATISVNK*QNQNWC
Trigger: GCACCAATTTTGGTTCTGCAACTTATTAACTGAGAT...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 72 bp CAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATaGTCAAGAGCATTAGTGTGGTTGCCACCTTATATA +
Preference number: 3 (lower is better)
Translates to: QEKSGPCLHQCQ*SRALVWLPPYI
Trigger: TATATAAGGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 72 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTaGATCCCCATCTCGAAGGGACACAATGCTCCTAAA +
Preference number: 3 (lower is better)
Translates to: RYLKYSHHIHSV*IPISKGHNAPK
Trigger: TTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAAATTTGTTCCCAGGTaGAAAAGAGGAAAGAGTTTC +
Preference number: 3 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHKFVPR*KRGKSF
Trigger: GAAACTCTTTCCTCTTTTCAACCTGGGAACAAATTT...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CAA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTTCAGCAGGTCACAGATaGCCTGAAGCCATTGACCAA +
Preference number: 3 (lower is better)
Translates to: KGHLPGSTHISIILLTMLSAGHR*PEAIDQ
Trigger: TTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGA...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCAAGTCTCAGGTAAATaGAAGTTTTCTTCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEQVSGK*KFSSSW
Trigger: CCAGGAAGAAGAAAACTTCAATTTACCTGAGACTTG...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp ACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACAGTCACTAGTTGCAGATTAACATaGTCAGGTATGTCAGAGATA +
Preference number: 3 (lower is better)
Translates to: TTEATMASKRISNKATVTSCRLT*SGMSEI
Trigger: TATCTCTGACATACCTGACAATGTTAATCTGCAACT...AGTGACTGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAAAATCAGTCTCTCCATaGCAGGGGGTGGCATCAAGT +
Preference number: 3 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTKSVSP*QGVASS
Trigger: ACTTGATGCCACCCCCTGCAATGGAGAGACTGATTT...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
3UTR-3UTR CAA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAAAGAAGAGCAGAGGCTTaGAAGGCAGCTCAACCTTAC +
Preference number: 3 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIERRAEA*KAAQPY
Trigger: GTAAGGTTGAGCTGCCTTCAAAGCCTCTGCTCTTCT...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTTCCCTGTTGAATACATaGGTTGTGAAATGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPSLLNT*VVKWEE
Trigger: TTCTTCCCATTTCACAACCAATGTATTCAACAGGGA...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATAGTTGCAGATTAACATaGTCAGGTATGTCAGAGATA +
Preference number: 3 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNSCRLT*SGMSEI
Trigger: TATCTCTGACATACCTGACAATGTTAATCTGCAACT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR TCA 72 bp CATCATTCAAAACCTGCCAGGATGACACTATTAAGCTaGAGGTTTAACCAAGGCAGGAGAGAAGCCAATTTA +
Preference number: 3 (lower is better)
Translates to: HHSKPARMTLLS*RFNQGRREANL
Trigger: TAAATTGGCTTCTCTCCTGCCTTGGTTAAACCTTCAGCTTAATAGTGTCATCCTGGCAGGTTTTGAATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR TCA 72 bp TTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTaGAGTACAGTCATCACATTCACAGTGTGTGGATCC +
Preference number: 3 (lower is better)
Translates to: LQINIVRYVRDT*STVITFTVCGS
Trigger: GGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR TCA 72 bp ATGTCGGAGATCAAGTCATCTGCCAACTGGAAAGATTaGAATCATTGGGATGCGAATTCTATAGCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: MSEIKSSANWKD*NHWDANSIAKA
Trigger: TGCCTTTGCTATAGAATTCGCATCCCAATGATTTCAATCTTTCCAGTTGGCAGATGACTTGATCTCCGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448952.1
3UTR GCA 72 bp ATGCAAATATTTAGAAACCAAGAGAAAAGTGGGCCATaGCTACACCAGTGTCAATGCTCAAGAGCATTAGTG +
Preference number: 3 (lower is better)
Translates to: MQIFRNQEKSGP*LHQCQCSRALV
Trigger: CACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAAATATTTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR GCA 72 bp ACGATCTCAGTTAATAAGTTGCAGAACCAAAATTGGTaGAACAGAAAGCAGAATGTGACTCAAGGCTATCTC +
Preference number: 3 (lower is better)
Translates to: TISVNKLQNQNW*NRKQNVTQGYL
Trigger: GAGATAGCCTTGAGTCACATTCTGCTTTCTGTTGCACCAATTTTGGTTCTGCAACTTATTAACTGAGATCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 72 bp TGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTaGTTGCCACCTTATATAAATGTTCAGTTTATTAGG +
Preference number: 3 (lower is better)
Translates to: CLHQCQCSRALV*LPPYINVQFIR
Trigger: CCTAATAAACTGAACATTTATATAAGGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CCA 72 bp ATGTTAATAATCTTCCTGTTCACCCCACTCAACAACTaGCTCGTCATTCATACGCAAAATGAGGTAAGAAAG +
Preference number: 3 (lower is better)
Translates to: MLIIFLFTPLNN*LVIHTQNEVRK
Trigger: CTTTCTTACCTCATTTTGCGTATGAATGACGAGCCAGTTGTTGAGTGGGGTGAACAGGAAGATTATTAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAACGACAGCAACCATATTaGCATCATGTATTAGAGTTA +
Preference number: 3 (lower is better)
Translates to: FHAHIDLECLYHKEPTTERQQPY*HHVLEL
Trigger: TAACTCTAATACATGATGCAAATATGGTTGCTGTCG...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTAGTTGCAGATTAACATaGTCAGGTATGTCAGAGATA +
Preference number: 3 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPSCRLT*SGMSEI
Trigger: TATCTCTGACATACCTGACAATGTTAATCTGCAACT...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CAA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTAAATTTGTTCCCAGGTaGAAAAGAGGAAAGAGTTTC +
Preference number: 3 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPKFVPR*KRGKSF
Trigger: GAAACTCTTTCCTCTTTTCAACCTGGGAACAAATTT...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CAA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAAATGGGAAGAAAAAGTTaGCCTTATCTCTCTGGAACA +
Preference number: 3 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIEMGRKS*PYLSGT
Trigger: TGTTCCAGAGAGATAAGGCAAACTTTTTCTTCCCAT...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGCATTGGGTCACTTTTTaGGACCATAAGTCATTCCCA +
Preference number: 3 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLHWVTF*DHKSFP
Trigger: TGGGAATGACTTATGGTCCAAAAAAGTGACCCAATG...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCGAAAGATTGAAATCATaGGGATGCGAATTCTATAGC +
Preference number: 3 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVERLKS*GCEFYS
Trigger: GCTATAGAATTCGCATCCCAATGATTTCAATCTTTC...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448952.1
3UTR-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGTGCCAACTGGAAAGATaGAAATCATTGGGATGCGAA +
Preference number: 3 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLCQLER*KSLGCE
Trigger: TTCGCATCCCAATGATTTCAATCTTTCCAGTTGGCA...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS-3UTR TCA 90 bp GCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCAGGCTTTCCCACTTGTaGGGGCAGGACAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: ASSSTFPLGSPPSPDGWGRLSHL*GQDRNR
Trigger: CCTGTTCCTGTCCTGCCCTCACAAGTGGGAAAGCCT...GCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp GTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCACAGACCTCCATTaGCACACGGATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: VASSSTFPLGSPPSPDGWGTDLH*HTDQRH
Trigger: GTGCCTCTGATCCGTGTGTCAATGGAGGTCTGTGCC...CCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR GCA 90 bp GCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCTCAGCATTGCTAGTCTaGCGCGCTCTAGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: ASSSTFPLGSPPSPDGWGSALLV*RALARH
Trigger: GTGTCTGGCTAGAGCGCGGCAGACTAGCAATGCTGA...GCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp GCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCCTTCCATTTGCCACCTaGAGGTCTGGGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: ASSSTFPLGSPPSPDGWGLPFAT*RSGTVG
Trigger: ACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAG...GCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp AGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCTGTAGGCCATGGAGACAAGGTTaGCTGGCACACTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: SSTFPLGSPPSPDGWGCRPWRQG*LAHSSV
Trigger: CACTGATGAGTGTGCCAGTCAACCTTGTCTCCATGG...CCTACAGCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACGGCACAGACCTCCATTaGCACACGGATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYGTDLH*HTDQRH
Trigger: GTGCCTCTGATCCGTGTGTCAATGGAGGTCTGTGCC...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGCCATCGCCCTCAAATaGAAGTGTGGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: VASSSTFPLGSPPSPDGWAIALK*KCGCDF
Trigger: GAAATCGCAACCACACTTTCATTTGAGGGCGATGGC...CCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp GCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCTCACACAGCCTGCCTTaGCATTTAATGATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ASSSTFPLGSPPSPDGWGSHSLP*HLMMSQ
Trigger: CTGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGA...GCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp GTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCACTGGAATTTGTTaGGTAAGTCCTGGCACAGAC +
Preference number: 4 (lower is better)
Translates to: VASSSTFPLGSPPSPDGWGTGIC*VSPGTD
Trigger: GTCTGTGCCAGGACTTACTCAACAAATTCCAGTGCC...CCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR GCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACGCAGGTGGCTCCATTTaGACACTGGTGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYAGGSI*TLVTLA
Trigger: TGCCAGAGTCACCAGTGTGCAAATGGAGCCACCTGC...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp CAGGGGGTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGTAGGTTCCCTGAGTTaGCCTTTTGTTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QGVASSSTFPLGSPPSPDVGSLS*PFVGGD
Trigger: GTCACCTCCAACAAAAGGGCAACTCAGGGAACCTAC...GTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CCA 90 bp GGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGCCTCTGGTGTGTTGCTaGTGGTCTGGTCCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: GSLSCPFVGGDNRSNNGQPLVCC*WSGPSP
Trigger: CGGACTGGGACCAGACCACCAGCAACACACCAGAGG...CTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp GTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGCACATTCACAGTGTGTaGATCCCCATCTCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: VASSSTFPLGSPPSPDGWHIHSV*IPISKG
Trigger: TCCCTTCGAGATGGGGATCCACACACTGTGAATGTG...CCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR TCA 90 bp AGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCTGTAGGTTATTTAGACATTGCTaGTGGGTACAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSTFPLGSPPSPDGWGCRLFRHC*WVQPRR
Trigger: TCTCCTGGGCTGTACCCATCAGCAATGTCTAAATAA...CCTACAGCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACCAAACACCTCCATTGTaGCAGGGGTTGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYQTPPL*QGLDLQ
Trigger: CTGCAAGTCCAACCCCTGTCACAATGGAGGTGTTTG...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GAGGTGACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACATCCCAGTCCGGCTCCTaGTCCCTGTCTGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: EVTTEATMASKRISNKATSQSGS*SLSVSE
Trigger: CTCTGAGACAGACAGGGATCAGGAGCCGGACTGGGA...TGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp GGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGTGCCACCTGGAGGTCTaGGACAGTGGGTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: GSLSCPFVGGDNRSNNGQCHLEV*DSGSVM
Trigger: CATGACAGACCCACTGTCCCAGACCTCCAGGTGGCA...CTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp GCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCCAACAGAAGCAACAATaGCCAGCAAGAGGATCAGTA +
Preference number: 4 (lower is better)
Translates to: ASSSTFPLGSPPSPDGWGQQKQQ*PARGSV
Trigger: TACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTG...GCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCTGGTGTGTTGCTGGTaGTCTGGTCCCAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHLVCCW*SGPSPA
Trigger: AGCCGGACTGGGACCAGACCACCAGCAACACACCAG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATCGTGAGGACACGGGCTaGATCCACACCACTGAACCT +
Preference number: 4 (lower is better)
Translates to: VCGSPSRRDTMLLNQSLHREDTG*IHTTEP
Trigger: AGGTTCAGTGGTGTGGATTCAGCCCGTGTCCTCACG...ATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGGCACAGACCTCCATTaGCACACGGATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHGTDLH*HTDQRH
Trigger: GTGCCTCTGATCCGTGTGTCAATGGAGGTCTGTGCC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACATTACCTCCACGAAATaGCACTCTCCATCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYITSTK*HSPSLV
Trigger: CACCAGCGATGGAGAGTGGCATTTCGTGGAGGTAAT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCAGAGAGGAGCGGGTaGCTCAGAACCCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPISERSG*LRTPRC
Trigger: GCACCTGGGGGTTCTGAGGCACCCGCTCCTCTCTGA...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCAGAGAGGAGCGGGTaGCTCAGAACCCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SNKATVTEPIVVKMSEIKSERSG*LRTPRC
Trigger: GCACCTGGGGGTTCTGAGGCACCCGCTCCTCTCTGA...CTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACCCATCGCTGGTGTTGTaGGAAATGAACAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYPSLVL*EMNRST
Trigger: GGTGCTTCTGTTCATTTCCCACAACACCAGCGATGG...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGCCTCTGGTGTGTTGCTaGTGGTCTGGTCCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGPLVCC*WSGPSP
Trigger: CGGACTGGGACCAGACCACCAGCAACACACCAGAGG...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTCTGGTGTGTTGCTaGTGGTCTGGTCCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAPLVCC*WSGPSP
Trigger: CGGACTGGGACCAGACCACCAGCAACACACCAGAGG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAGGTGACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACATCACTGAGCCACTTTTaGCCCACAGGAAGCCATCGC +
Preference number: 4 (lower is better)
Translates to: EVTTEATMASKRISNKATSLSHF*PTGSHR
Trigger: GCGATGGCTTCCTGTGGGTCAAAAGTGGCTCAGTGA...TGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGCCCTTGGTTGTCACTaGGCCACTTTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHALGCH*ATFDPQ
Trigger: CTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCATACATTCAAATCCTTaGAGCACCGGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: WAMPTPVSMLKSISVVATIHSNP*STGWHW
Trigger: CCAGTGCCAGCCGGTGCTTCAAGGATTTGAATGTAT...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGTCCCAGTCCGGCTCCTaGTCCCTGTCTGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKSQSGS*SLSVSE
Trigger: CTCTGAGACAGACAGGGATCAGGAGCCGGACTGGGA...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGTGTTGAGTTCACAGTaGTCCCCCAGGAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHVLSSQ*SPRNPG
Trigger: CCCTGGATTCCTGGGGGATCACTGTGAACTCAACAC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCTTGCCATCTGGAGTCTaGAGGGCAGACCTACATTCA +
Preference number: 4 (lower is better)
Translates to: WAMPTPVSMLKSISVVATLPSGV*RADLHS
Trigger: TGAATGTAGGTCTGCCCTGCAGACTCCAGATGGCAA...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATTCAGAGAGGAGCGGGTaGCTCAGAACCCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHSERSG*LRTPRC
Trigger: GCACCTGGGGGTTCTGAGGCACCCGCTCCTCTCTGA...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCCATTTTAATTCAGTCTaGAACTCTGTGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: ASSSTFPLGSPPSPDGWGHFNSV*NSVQLP
Trigger: AGGCAACTGCACAGAGTTCCAGACTGAATTAAAATG...GCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTCGCAGTGTCTGCCTTaGTATCCTGGGACACAGAAG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHSQCLP*YPGTQK
Trigger: CTTCTGTGTCCCAGGATATCAAGGCAGACACTGCGA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTGCCCTTGGTTGTCACTaGGCCACTTTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAALGCH*ATFDPQ
Trigger: CTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGC...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATAGGCTTTCCCACTTGTaGGGGCAGGACAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNRLSHL*GQDRNR
Trigger: CCTGTTCCTGTCCTGCCCTCACAAGTGGGAAAGCCT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp ATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCGGCACAGACCTCCATTaGCACACGGATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ISNKATVTEPIVVKMSEIGTDLH*HTDQRH
Trigger: GTGCCTCTGATCCGTGTGTCAATGGAGGTCTGTGCC...GATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR TCA 90 bp ACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACAGTCACTGTGTTGAGTTCACAGTaGTCCCCCAGGAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: TTEATMASKRISNKATVTVLSSQ*SPRNPG
Trigger: CCCTGGATTCCTGGGGGATCACTGTGAACTCAACAC...AGTGACTGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAACTCAGAACCCCCAGGTaGCATCTCTGTCCCACCCTA +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLELRTPR*HLCPTL
Trigger: TAGGGTGGGACAGAGATGGCACCTGGGGGTTCTGAG...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCACACGGCCCCATTTTaGCAAGGGCTGGAAGCACAC +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIHTAPF*QGLEAH
Trigger: GTGTGCTTCCAGCCCTTGCCAAAATGGGGCCGTGTG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAACACACGGCCCCATTTTaGCAAGGGCTGGAAGCACAC +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEHTAPF*QGLEAH
Trigger: GTGTGCTTCCAGCCCTTGCCAAAATGGGGCCGTGTG...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCCACACGGCCCCATTTTaGCAAGGGCTGGAAGCACAC +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLHTAPF*QGLEAH
Trigger: GTGTGCTTCCAGCCCTTGCCAAAATGGGGCCGTGTG...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTTGCCACCTGGAGGTCTaGGACAGTGGGTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQACHLEV*DSGSVM
Trigger: CATGACAGACCCACTGTCCCAGACCTCCAGGTGGCA...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATTGCCACCTGGAGGTCTaGGACAGTGGGTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNCHLEV*DSGSVM
Trigger: CATGACAGACCCACTGTCCCAGACCTCCAGGTGGCA...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACCTTATGCTTCTGGACTaGAGGGAGACTTCTCTGATT +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYLMLLD*RETSLI
Trigger: AATCAGAGAAGTCTCCCTCCAGTCCAGAAGCATAAG...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACAGCTCCTTATCCCTTTaGATACCAAGCATAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYSSLSL*IPSIAE
Trigger: CTCAGCTATGCTTGGTATCCAAAGGGATAAGGAGCT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCTGGTCTCAAACTCCTaGCCTCAGGTGTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQELVSNS*PQVFRP
Trigger: TGGGCGGAACACCTGAGGCCAGGAGTTTGAGACCAG...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCCATGCAACGGCCGCCTCCTaGGTTCAAGCAAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FPVFSAGHRLPEAIDQLHATAAS*VQASLL
Trigger: CAGGAGACTTGCTTGAACCCAGGAGGCGGCCGTTGC...ATGGAGTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGAGGTCGATCTCACACTaGGCACCTGTGTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGRSISH*APVYPG
Trigger: GCCTGGATACACAGGTGCCCAGTGTGAGATCGACCT...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGCCATCGCCCTCAAATaGAAGTGTGGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHAIALK*KCGCDF
Trigger: GAAATCGCAACCACACTTTCATTTGAGGGCGATGGC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAATCACTGAGCCACTTTTaGCCCACAGGAAGCCATCGC +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLESLSHF*PTGSHR
Trigger: GCGATGGCTTCCTGTGGGTCAAAAGTGGCTCAGTGA...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGCCCTTGGTTGTCACTaGGCCACTTTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLALGCH*ATFDPQ
Trigger: CTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGC...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCAGCGTCCTCTGCTTTaGCAAGGTTGGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAQRPLL*QGWLSH
Trigger: GTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAACTCAGCCACAAGTTaGTGCAGCGTCCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SHHIHSVWIPISKGHNAPNSATS*CSVLCF
Trigger: AAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTT...AGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCAAACATGGAGAGGCTaGTGGTGTCTCCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHQTWRG*WCLHSS
Trigger: AGAGCTATGGAGACACCATCAGCCTCTCCATGTTTG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp GGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGCAGGAGTAAGCCTGATGGTTaGAGCGTTCGGACAAACATG +
Preference number: 4 (lower is better)
Translates to: GSPSRRDTMLLNQSLHCRSKPDG*SVRTNM
Trigger: CATGTTTGTCCGAACGCTTCAACCATCAGGCTTACT...CCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATAGGCTTTCCCACTTGTaGGGGCAGGACAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHRLSHL*GQDRNR
Trigger: CCTGTTCCTGTCCTGCCCTCACAAGTGGGAAAGCCT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp GCTGTAGGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATCTGAATCCACACCACTaGACCTCCTCACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: AVGSLSCPFVGGDNRSNNLNPHH*TSSQAF
Trigger: GAAAGCCTGTGAGGAGGTTCAGTGGTGTGGATTCAG...ATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACCTACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCGTGAGGACACGGGCTaGATCCACACCACTGAACCT +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPREDTG*IHTTEP
Trigger: AGGTTCAGTGGTGTGGATTCAGCCCGTGTCCTCACG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGCAGGCCCTTTTGTTGGAGGTaGCAACAGAAGCAACAATGG +
Preference number: 4 (lower is better)
Translates to: GSPSRRDTMLLNQSLHCRPFCWR*QQKQQW
Trigger: CCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGG...CCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR TCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACAAACACCTACTAGGTTaGCAGAGTGAGTTTCTGATC +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYKHLLG*QSEFLI
Trigger: GATCAGAAACTCACTCTGTCAACCTAGTAGGTGTTT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCCACAGTGTGTCCCTGTaGATCCACTACCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLHSVSL*IHYPCS
Trigger: ACTGCACGGGTAGTGGATTCACAGGGACACACTGTG...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACATTACCTCCACGAAATaGCACTCTCCATCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHITSTK*HSPSLV
Trigger: CACCAGCGATGGAGAGTGGCATTTCGTGGAGGTAAT...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTTCAGCATTGCTAGTCTaGCGCGCTCTAGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQASALLV*RALARH
Trigger: GTGTCTGGCTAGAGCGCGGCAGACTAGCAATGCTGA...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTTGTCCACTTCCATTTaGCACCTGGAGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: IHSVWIPISKGHNAPKSVLSTSI*HLEVWD
Trigger: GTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAA...GACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGTTGTCCACTTCCATTTaGCACCTGGAGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGLSTSI*HLEVWD
Trigger: GTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAA...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCTCTGTCAGAGCAGTTaGCATGGATACAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHLCQSS*HGYRGL
Trigger: CAAACCCCTGTATCCATGGCAACTGCTCTGACAGAG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTGTGCAGTGGTAGGCTaGAACTCTGTCAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHCAVVG*NSVRAV
Trigger: AACTGCTCTGACAGAGTTGCAGCCTACCACTGCACA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCGCAGGTGGCTCCATTTaGACACTGGTGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIAGGSI*TLVTLA
Trigger: TGCCAGAGTCACCAGTGTGCAAATGGAGCCACCTGC...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCAGTCTGGAACTCTGTaGAGTTGCCTCCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHQSGTL*SCLHCS
Trigger: GCTACAATGGAGGCAACTGCACAGAGTTCCAGACTG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGTAGGTTCCCTGAGTTaGCCTTTTGTTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHVGSLS*PFVGGD
Trigger: GTCACCTCCAACAAAAGGGCAACTCAGGGAACCTAC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCCTACACCAGTGTCAATaGTCAAGAGCATTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: WAMPTPVSMLKSISVVATLHQCQ*SRALVW
Trigger: CCACACTAATGCTCTTGAGCATTGACACTGGTGTAG...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCATAAAAGGAGAGGCTaGTTACGTCCACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAHKRRG*LRPPRS
Trigger: GCTGCGAGGTGGACGTAAGCAGCCTCTCCTTTTATG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGACAATCTTGGCTCATTaGAACGGCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMTILAH*NGRLLG
Trigger: ACCCAGGAGGCGGCCGTTGCAATGAGCCAAGATTGT...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTGGGTGTTCACACAAGTaGCACTTCCTTGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: SHHIHSVWIPISKGHNAPGCSHK*HFLDRD
Trigger: ATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCC...AGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGGGTGTTCACACAAGTaGCACTTCCTTGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHGCSHK*HFLDRD
Trigger: ATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCATCAATTCCATCCTaGCACACGGCCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAPSIPS*HTAPFW
Trigger: CCAAAATGGGGCCGTGTGCCAGGATGGAATTGATGG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCAGGTCGATCTCACACTaGGCACCTGTGTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLRSISH*APVYPG
Trigger: GCCTGGATACACAGGTGCCCAGTGTGAGATCGACCT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATAGGTCGATCTCACACTaGGCACCTGTGTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNRSISH*APVYPG
Trigger: GCCTGGATACACAGGTGCCCAGTGTGAGATCGACCT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTTTCCTCTCAGACAGTTaGGGCCTTCATAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAFLSDS*GLHRAC
Trigger: ACAGGCCCTATGAAGGCCCCAACTGTCTGAGAGGAA...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538660.5
3UTR CAA 72 bp TGGAGGGAGACTTCTCTGATTAGATCTGAGCAAAACTaGACAACCCTCAGGAGCCTGCCAAGCATTCTCGGT +
Preference number: 4 (lower is better)
Translates to: WRETSLIRSEQN*TTLRSLPSILG
Trigger: ACCGAGAATGCTTGGCAGGCTCCTGAGGGTTGTCAAGTTTTGCTCAGATCTAATCAGAGAAGTCTCCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGTTCTTGCAGGGATCTaGAGCACATTCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHVLAGI*STFIHF
Trigger: GAAGTGGATGAATGTGCTTCAGATCCCTGCAAGAAC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTAGGCTTCATGGTAGCTaGAAGAAGAAGGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNARLHGS*KKKAVQ
Trigger: CTGGACTGCCTTCTTCTTTCAGCTACCATGAAGCCT...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGCGCAGTGGATTCCTGTaGATCCAGGCTGACAGATAC +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKRSGFL*IQADRY
Trigger: GTATCTGTCAGCCTGGATTCACAGGAATCCACTGCG...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTCACTGAGCCACTTTTaGCCCACAGGAAGCCATCGC +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRSLSHF*PTGSHR
Trigger: GCGATGGCTTCCTGTGGGTCAAAAGTGGCTCAGTGA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACAGCGTCCTCTGCTTTaGCAAGGTTGGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTQRPLL*QGWLSH
Trigger: GTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTG...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGCAGCGTCCTCTGCTTTaGCAAGGTTGGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: KRISNKATVTEPIVVKMSQRPLL*QGWLSH
Trigger: GTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTG...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAGTAAGCCTGATGGTTaGAGCGTTCGGACAAACATG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHSKPDG*SVRTNM
Trigger: CATGTTTGTCCGAACGCTTCAACCATCAGGCTTACT...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp GTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATCCATTTGCACACTGGTaGCTCTGGCAGTTGTCTATA +
Preference number: 4 (lower is better)
Translates to: VCGSPSRRDTMLLNQSLHPFAHW*LWQLSI
Trigger: TATAGACAACTGCCAGAGTCACCAGTGTGCAAATGG...ATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTGGCACTGGAATTTGTTaGGTAAGTCCTGGCACAGAC +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAGTGIC*VSPGTD
Trigger: GTCTGTGCCAGGACTTACTCAACAAATTCCAGTGCC...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCAAGGCGACAGTCACTaGGCCAATAGTGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHQGDSH*ANSGEN
Trigger: ATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGGATCTGAGCAAAACTTaGCAACCCTCAGGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEDLSKT*QPSGAC
Trigger: GCAGGCTCCTGAGGGTTGTCAAGTTTTGCTCAGATC...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACGGGCAACTTAAAATGTaGAAATACCCAGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYGQLKM*KYPEME
Trigger: CTCCATTTCTGGGTATTTTCACATTTTAAGTTGCCC...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGTCCCAGTCCGGCTCCTaGTCCCTGTCTGTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKSQSGS*SLSVSE
Trigger: CTCTGAGACAGACAGGGATCAGGAGCCGGACTGGGA...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATGTGTTGAGTTCACAGTaGTCCCCCAGGAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHVLSSQ*SPRNPG
Trigger: CCCTGGATTCCTGGGGGATCACTGTGAACTCAACAC...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCACAGTGTGTCCCTGTaGATCCACTACCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHHSVSL*IHYPCS
Trigger: ACTGCACGGGTAGTGGATTCACAGGGACACACTGTG...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGCAAACACCTCCATTGTaGCAGGGGTTGGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKQTPPL*QGLDPG
Trigger: ACCAGGATCCAACCCCTGTCACAATGGAGGTGTTTG...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS-3UTR GCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACCTTGGAAGTGAGGGATaGATGTTCCATTATTTAGAC +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYLGSEG*MFHYLD
Trigger: GTCTAAATAATGGAACATGCATCCCTCACTTCCAAG...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCCAAACACATCCCTGTTaGTTCGGAAAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: WAMPTPVSMLKSISVVATQTHPC*FGKVEE
Trigger: CTCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTG...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGGCAGAGCAACACCATTaGTGGTCATTCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGAEQHH*WSFPLV
Trigger: TACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGC...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATACTGGCCAAATCTGCCTaGCACATACTCTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTILAKSA*HILSQT
Trigger: TGTCTGAGAGAGTATGTGGCAGGCAGATTTGGCCAG...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTCAGCATTGCTAGTCTaGCGCGCTCTAGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRSALLV*RALARH
Trigger: GTGTCTGGCTAGAGCGCGGCAGACTAGCAATGCTGA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATTTGTCCACTTCCATTTaGCACCTGGAGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNLSTSI*HLEVWD
Trigger: GTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAA...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCGTACTTAGACACCCTTaGAGGCCCTTTATATTGTCA +
Preference number: 4 (lower is better)
Translates to: WAMPTPVSMLKSISVVATVLRHP*RPFILS
Trigger: TGACAATATAAAGGGCCTGCAAGGGTGTCTAAGTAC...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATATGTGCAGTGGTAGGCTaGAACTCTGTCAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTICAVVG*NSVRAV
Trigger: AACTGCTCTGACAGAGTTGCAGCCTACCACTGCACA...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCATCCAGGCTCACATGTaGAGTGGTAGGCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: ISNKATVTEPIVVKMSEIIQAHM*SGRLQL
Trigger: GAGTTGCAGCCTACCACTGCACATGTGAGCCTGGAT...GATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAATCCAGGCTCACATGTaGAGTGGTAGGCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEIQAHM*SGRLQL
Trigger: GAGTTGCAGCCTACCACTGCACATGTGAGCCTGGAT...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTGTAGGTTCCCTGAGTTaGCCTTTTGTTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAVGSLS*PFVGGD
Trigger: GTCACCTCCAACAAAAGGGCAACTCAGGGAACCTAC...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAGGTGACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACAAATCAGTCTCTCCATTaGAGGGGGTGGCATCAAGTT +
Preference number: 4 (lower is better)
Translates to: EVTTEATMASKRISNKATNQSLH*RGWHQV
Trigger: AACTTGATGCCACCCCCTGCAATGGAGAGACTGATT...TGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR GCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATAAAAGGAGAGGCTaGTTACGTCCACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTHKRRG*LRPPRS
Trigger: GCTGCGAGGTGGACGTAAGCAGCCTCTCCTTTTATG...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATCAGAGAGGAGCGGGTaGCTCAGAACCCCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTSERSG*LRTPRC
Trigger: GCACCTGGGGGTTCTGAGGCACCCGCTCCTCTCTGA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTACTCTCTCAGACAGTTaGGGCCTTCATAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: YVTNTLLRPWDRTATKAATLSDS*GLHRAC
Trigger: ACAGGCCCTATGAAGGCCCCAACTGTCTGAGAGAGT...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCACTCTCTCAGACAGTTaGGGCCTTCATAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPITLSDS*GLHRAC
Trigger: ACAGGCCCTATGAAGGCCCCAACTGTCTGAGAGAGT...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp GGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGTCTCCAGCACAGCCTTaGGTTACATTGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: GSLSCPFVGGDNRSNNGQSPAQP*VTLTRT
Trigger: AGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGA...CTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCACAGTGGGTCTGTCATaGAAAGGGTCACTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLTVGLS*KGSLRA
Trigger: GGCACGAAGTGACCCTTTCCATGACAGACCCACTGT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTTCCATTTGCCACCTaGAGGTCTGGGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHLPFAT*RSGTVG
Trigger: ACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAG...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCCTTCCATTTGCCACCTaGAGGTCTGGGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRLPFAT*RSGTVG
Trigger: ACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAG...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACCATTTTAATTCAGTCTaGAACTCTGTGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYHFNSV*NSVQLP
Trigger: AGGCAACTGCACAGAGTTCCAGACTGAATTAAAATG...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACAATTCTCGGTCTTGGGTaGGCCAGAGTGTTCACACCA +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTILGLG*ARVFTP
Trigger: TGGTGTGAACACTCTGGCCCACCCAAGACCGAGAAT...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTCTGGTGTGTTGCTGGTaGTCTGGTCCCAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPLVCCW*SGPSPA
Trigger: AGCCGGACTGGGACCAGACCACCAGCAACACACCAG...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTCGCAGTGTCTGCCTTaGTATCCTGGGACACAGAAG +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRSQCLP*YPGTQK
Trigger: CTTCTGTGTCCCAGGATATCAAGGCAGACACTGCGA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTACTATTGCATTCATTaGGGTCGATCTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHYYCIH*GRSHTG
Trigger: CCCAGTGTGAGATCGACCTCAATGAATGCAATAGTA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCAAAGAAGGCAGTCCAGTaGTGCGTCCATATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: SVWIPISKGHNAPKSVSPKKAVQ*CVHIVS
Trigger: AGAAACAATATGGACGCATCACTGGACTGCCTTCTT...TGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGAGGCTTCATGGTAGCTaGAAGAAGAAGGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKRLHGS*KKKAVQ
Trigger: CTGGACTGCCTTCTTCTTTCAGCTACCATGAAGCCT...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGATACAGACATAACCTaGGGCTTCATGGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHDTDIT*GFMVAE
Trigger: TTCAGCTACCATGAAGCCTCAGGTTATGTCTGTATC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACAGCCATCGCCCTCAAATaGAAGTGTGGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTAIALK*KCGCDF
Trigger: GAAATCGCAACCACACTTTCATTTGAGGGCGATGGC...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGCCATCGCCCTCAAATaGAAGTGTGGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEAIALK*KCGCDF
Trigger: GAAATCGCAACCACACTTTCATTTGAGGGCGATGGC...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCGAACAGAAGCACCTTTaGCTGATTATTGACCTGAAT +
Preference number: 4 (lower is better)
Translates to: WAMPTPVSMLKSISVVATEQKHL*LIIDLN
Trigger: ATTCAGGTCAATAATCAGTCAAAGGTGCTTCTGTTC...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATAACTCAGCCACAAGTTaGTGCAGCGTCCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNNSATS*CSVLCF
Trigger: AAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGCAAACATGGAGAGGCTaGTGGTGTCTCCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: SNKATVTEPIVVKMSEIKQTWRG*WCLHSS
Trigger: AGAGCTATGGAGACACCATCAGCCTCTCCATGTTTG...CTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAAGGCTTTCCCACTTGTaGGGGCAGGACAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTERLSHL*GQDRNR
Trigger: CCTGTTCCTGTCCTGCCCTCACAAGTGGGAAAGCCT...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCTGAATCCACACCACTaGACCTCCTCACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPLNPHH*TSSQAF
Trigger: GAAAGCCTGTGAGGAGGTTCAGTGGTGTGGATTCAG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCATACATTCAAATCCTTaGAGCACCGGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLIHSNP*STGWHW
Trigger: CCAGTGCCAGCCGGTGCTTCAAGGATTTGAATGTAT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp AGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCAACAGCCAGTGACCACTaGATTGGTAGAGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SVWIPISKGHNAPKSVSPTASDH*IGRDFE
Trigger: CTCAAAATCTCTACCAATTCAGTGGTCACTGGCTGT...TGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCAAGGCGACAGTCACTaGGCCAATAGTGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAQGDSH*ANSGEN
Trigger: ATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGCCCTTTTGTTGGAGGTaGCAACAGAAGCAACAATGG +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGPFCWR*QQKQQW
Trigger: CCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGG...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGGAAGAGCAGAGGCTTTaGAGGCAGCTCAACCTTACT +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMEEQRL*RQLNLT
Trigger: AGTAAGGTTGAGCTGCCTTCAAAGCCTCTGCTCTTC...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATAAGACCTGTGTCTTTGTaGTGCAAAAGAGGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTIRPVSL*CKRGQL
Trigger: TAGCTGGCCTCTTTTGCATCACAAAGACACAGGTCT...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCCCTGCTTCACCCTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTPASPS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGAGGGTGAAGCAGG...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGCCCCCAGAGCATCCTaGCAAGTTGCACCATTTAAA +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKAPRAS*QVAPFK
Trigger: TTTAAATGGTGCAACTTGTCAGGATGCTCTGGGGGC...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGCCCCCAGAGCATCCTaGCAAGTTGCACCATTTAAA +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLAPRAS*QVAPFK
Trigger: TTTAAATGGTGCAACTTGTCAGGATGCTCTGGGGGC...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATCACACTCATCAGTGTTaGGTTCACAGTGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNHTHQC*VHSDPP
Trigger: TGGGGGATCACTGTGAACTCAACACTGATGAGTGTG...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGGAACTACTCAGGAATaGAGACCAACCAGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLGTTQE*RPTRAS
Trigger: GCTTGCTCTGGTTGGTCTTCATTCCTGAGTAGTTCC...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS-3UTR GCA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGATTACCTCCACGAAATaGCACTCTCCATCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KRISNKATVTEPIVVKMSITSTK*HSPSLV
Trigger: CACCAGCGATGGAGAGTGGCATTTCGTGGAGGTAAT...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGGCAGAGCAACACCATTaGTGGTCATTCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEAEQHH*WSFPLV
Trigger: TACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGC...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGCAGAGCAACACCATTaGTGGTCATTCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLAEQHH*WSFPLV
Trigger: TACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGC...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACAACTGGATTGAGAGATaGATTGTTTGTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYNWIER*IVCWIW
Trigger: CCAAATCCAACAAACAATGCATCTCTCAATCCAGTT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTCTCTGTCAGAGCAGTTaGCATGGATACAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQALCQSS*HGYRGL
Trigger: CAAACCCCTGTATCCATGGCAACTGCTCTGACAGAG...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCTCTGTCAGAGCAGTTaGCATGGATACAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPILCQSS*HGYRGL
Trigger: CAAACCCCTGTATCCATGGCAACTGCTCTGACAGAG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTGTGCAGTGGTAGGCTaGAACTCTGTCAGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLCAVVG*NSVRAV
Trigger: AACTGCTCTGACAGAGTTGCAGCCTACCACTGCACA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCAGTCTGGAACTCTGTaGAGTTGCCTCCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEQSGTL*SCLHCS
Trigger: GCTACAATGGAGGCAACTGCACAGAGTTCCAGACTG...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCGTAGGTTCCCTGAGTTaGCCTTTTGTTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIVGSLS*PFVGGD
Trigger: GTCACCTCCAACAAAAGGGCAACTCAGGGAACCTAC...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCCCATCAATTCCATCCTaGCACACGGCCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRPSIPS*HTAPFW
Trigger: CCAAAATGGGGCCGTGTGCCAGGATGGAATTGATGG...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGACGTCTTCTTCGCAGTaGATTCCTGTGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKTSSSQ*IPVNPG
Trigger: GCCTGGATTCACAGGAATCCACTGCGAAGAAGACGT...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATACGTCTTCTTCGCAGTaGATTCCTGTGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNTSSSQ*IPVNPG
Trigger: GCCTGGATTCACAGGAATCCACTGCGAAGAAGACGT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCACGTCTTCTTCGCAGTaGATTCCTGTGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLTSSSQ*IPVNPG
Trigger: GCCTGGATTCACAGGAATCCACTGCGAAGAAGACGT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAGGTGACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACATACAAACTGAGCCCTTaGTTGTCACTGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: EVTTEATMASKRISNKATYKLSP*LSLSHF
Trigger: AAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTA...TGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTACAAACTGAGCCCTTaGTTGTCACTGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHYKLSP*LSLSHF
Trigger: AAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCCATCGCTGGTGTTGTaGGAAATGAACAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIPSLVL*EMNRST
Trigger: GGTGCTTCTGTTCATTTCCCACAACACCAGCGATGG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAACCATCGCTGGTGTTGTaGGAAATGAACAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEPSLVL*EMNRST
Trigger: GGTGCTTCTGTTCATTTCCCACAACACCAGCGATGG...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCCATAAGCATTCTCGGTCTTaGGTGGGCCAGAGTGTTCAC +
Preference number: 4 (lower is better)
Translates to: FPVFSAGHRLPEAIDQLHKHSRS*VGQSVH
Trigger: GTGAACACTCTGGCCCACCCAAGACCGAGAATGCTT...ATGGAGTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTCTGTATTTTGCCATCTaGAGTCTGCAGGGCAGACCT +
Preference number: 4 (lower is better)
Translates to: YVTNTLLRPWDRTATKAALYFAI*SLQGRP
Trigger: AGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAG...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTACTGGTGTGTTGCTGGTaGTCTGGTCCCAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVLVCCW*SGPSPA
Trigger: AGCCGGACTGGGACCAGACCACCAGCAACACACCAG...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCCTCTGGTGTGTTGCTaGTGGTCTGGTCCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVPLVCC*WSGPSP
Trigger: CGGACTGGGACCAGACCACCAGCAACACACCAGAGG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTCACATTCACAGTGTGTaGATCCCCATCTCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KATVTEPIVVKMSEIKSSHIHSV*IPISKG
Trigger: TCCCTTCGAGATGGGGATCCACACACTGTGAATGTG...AGATGACTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGAAGCACACTCATCGTaGTCTATCTCACAGAATCTT +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHEAHSS*SISQNL
Trigger: AAGATTCTGTGAGATAGATCACGATGAGTGTGCTTC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGTTCTTGCAGGGATCTaGAGCACATTCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKVLAGI*STFIHF
Trigger: GAAGTGGATGAATGTGCTTCAGATCCCTGCAAGAAC...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGAAGAAGGCAGTCCAGTaGTGCGTCCATATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGKKAVQ*CVHIVS
Trigger: AGAAACAATATGGACGCATCACTGGACTGCCTTCTT...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTTGAAGAACATTCATTaGCGTCTTCTTCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHLKNIH*RLLRSG
Trigger: TCCACTGCGAAGAAGACGTCAATGAATGTTCTTCAA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATATTATTTAGACATTGCTaGTGGGTACAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTILFRHC*WVQPRR
Trigger: TCTCCTGGGCTGTACCCATCAGCAATGTCTAAATAA...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGTTATTTAGACATTGCTaGTGGGTACAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGLFRHC*WVQPRR
Trigger: TCTCCTGGGCTGTACCCATCAGCAATGTCTAAATAA...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTTTATTTAGACATTGCTaGTGGGTACAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNALFRHC*WVQPRR
Trigger: TCTCCTGGGCTGTACCCATCAGCAATGTCTAAATAA...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACATGGCCATCTTGGAAGTaGGGGATGCATGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTWPSWK*GMHVPL
Trigger: TAATGGAACATGCATCCCTCACTTCCAAGATGGCCA...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTGGCCATCTTGGAAGTaGGGGATGCATGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIWPSWK*GMHVPL
Trigger: TAATGGAACATGCATCCCTCACTTCCAAGATGGCCA...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGCCCTTGGTTGTCACTaGGCCACTTTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPALGCH*ATFDPQ
Trigger: CTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGC...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTGAACAGTCTGAAACCTaGGGGCTATGTTACAAACTG +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAEQSET*GLCYKL
Trigger: CAGTTTGTAACATAGCCCTCAGGTTTCAGACTGTTC...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGTGGTGTTGTGGGAAATaGACAGAAGCACCTTTGACT +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGWCCGK*TEAPLT
Trigger: AGTCAAAGGTGCTTCTGTTCATTTCCCACAACACCA...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGTCACACAGCCTGCCTTaGCATTTAATGATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQESHSLP*HLMMSQ
Trigger: CTGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGA...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGTCACACAGCCTGCCTTaGCATTTAATGATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKSHSLP*HLMMSQ
Trigger: CTGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGA...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAATCACACAGCCTGCCTTaGCATTTAATGATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLESHSLP*HLMMSQ
Trigger: CTGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGA...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCACACAGCCTGCCTTaGCATTTAATGATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPISHSLP*HLMMSQ
Trigger: CTGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGA...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATAACTCAGCCACAAGTTaGTGCAGCGTCCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHNSATS*CSVLCF
Trigger: AAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCAAACATGGAGAGGCTaGTGGTGTCTCCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPQTWRG*WCLHSS
Trigger: AGAGCTATGGAGACACCATCAGCCTCTCCATGTTTG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGAGTAAGCCTGATGGTTaGAGCGTTCGGACAAACATG +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKSKPDG*SVRTNM
Trigger: CATGTTTGTCCGAACGCTTCAACCATCAGGCTTACT...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACACGTGAGGACACGGGCTaGATCCACACCACTGAACCT +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTREDTG*IHTTEP
Trigger: AGGTTCAGTGGTGTGGATTCAGCCCGTGTCCTCACG...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCCATTTGCACACTGGTaGCTCTGGCAGTTGTCTATA +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIPFAHW*LWQLSI
Trigger: TATAGACAACTGCCAGAGTCACCAGTGTGCAAATGG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAGGCACAGACCTCCATTaGCACACGGATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVGTDLH*HTDQRH
Trigger: GTGCCTCTGATCCGTGTGTCAATGGAGGTCTGTGCC...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAGGCACAGACCTCCATTaGCACACGGATCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTGTDLH*HTDQRH
Trigger: GTGCCTCTGATCCGTGTGTCAATGGAGGTCTGTGCC...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATGGCACTGGAATTTGTTaGGTAAGTCCTGGCACAGAC +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHGTGIC*VSPGTD
Trigger: GTCTGTGCCAGGACTTACTCAACAAATTCCAGTGCC...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCAAACACATCCCTGTTaGTTCGGAAAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHQTHPC*FGKVEE
Trigger: CTCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTGGCCAAATCTGCCTaGCACATACTCTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHLAKSA*HILSQT
Trigger: TGTCTGAGAGAGTATGTGGCAGGCAGATTTGGCCAG...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGTCAGCATTGCTAGTCTaGCGCGCTCTAGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKSALLV*RALARH
Trigger: GTGTCTGGCTAGAGCGCGGCAGACTAGCAATGCTGA...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGTTAAGTTCAGTCTCTTaGTTGTCAGGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGLSSVS*LSGRPP
Trigger: TGGTGGCCTACCTGACAAGCAAGAGACTGAACTTAA...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGTCACTTCGTGCCATGTaGCATCATTCACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKSLRAM*HHSLTA
Trigger: TGCAGTCAGTGAATGATGGCACATGGCACGAAGTGA...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACAGAAAGGGTCACTTCGTaGCATGTGCCATCATTCACT +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTERVTS*HVPSFT
Trigger: AGTGAATGATGGCACATGGCACGAAGTGACCCTTTC...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGAAAGGGTCACTTCGTaGCATGTGCCATCATTCACT +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEERVTS*HVPSFT
Trigger: AGTGAATGATGGCACATGGCACGAAGTGACCCTTTC...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTGTCAGAGCAGTTaGCATGGATACAGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHLCQSS*HGYRGL
Trigger: CAAACCCCTGTATCCATGGCAACTGCTCTGACAGAG...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp GGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGCAGGCTGTTGAGGGTAATCTaGTCTGTCTGCAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: GSPSRRDTMLLNQSLHCRLLRVI*SVCKIF
Trigger: GAAAATTTTGCAGACAGAGCAGATTACCCTCAACAG...CCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCAGTCTGGAACTCTGTaGAGTTGCCTCCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHQSGTL*SCLHCS
Trigger: GCTACAATGGAGGCAACTGCACAGAGTTCCAGACTG...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCAATCAGTCTCTCCATTaGAGGGGGTGGCATCAAGTT +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPINQSLH*RGWHQV
Trigger: AACTTGATGCCACCCCCTGCAATGGAGAGACTGATT...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGAATCAGTCTCTCCATTaGAGGGGGTGGCATCAAGTT +
Preference number: 4 (lower is better)
Translates to: KRISNKATVTEPIVVKMSNQSLH*RGWHQV
Trigger: AACTTGATGCCACCCCCTGCAATGGAGAGACTGATT...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR GCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAACAACCCTCAGGAGCCTaGCAAGCATTCTCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTEQPSGA*QAFSVL
Trigger: CAAGACCGAGAATGCTTGGCAGGCTCCTGAGGGTTG...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCCATAGAGAGGCTGTATTTTaGCATCTGGAGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPVFSAGHRLPEAIDQLHREAVF*HLESAG
Trigger: CCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCT...ATGGAGTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACACTCAGAACCCCCAGGTaGCATCTCTGTCCCACCCTA +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTLRTPR*HLCPTL
Trigger: TAGGGTGGGACAGAGATGGCACCTGGGGGTTCTGAG...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACTCAGAACCCCCAGGTaGCATCTCTGTCCCACCCTA +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTLRTPR*HLCPTL
Trigger: TAGGGTGGGACAGAGATGGCACCTGGGGGTTCTGAG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCTCAGAACCCCCAGGTaGCATCTCTGTCCCACCCTA +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMLRTPR*HLCPTL
Trigger: TAGGGTGGGACAGAGATGGCACCTGGGGGTTCTGAG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATCAAATACCTCCATGTTaGCAGGAGTTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNQIPPC*QEFLPQ
Trigger: CTGTGGCAAGAACTCCTGCCAACATGGAGGTATTTG...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACAGTCACTCCTCAAATGAAAGTGTaGTTGCGATTTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: TTEATMASKRISNKATVTPQMKV*LRFHTG
Trigger: CCCTGTGTGAAATCGCAACCACACTTTCATTTGAGG...AGTGACTGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp AGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGATCACTTTCAAGTaGAGTAGGAGCTTTCGCGAT +
Preference number: 4 (lower is better)
Translates to: SVWIPISKGHNAPKSVSPLITFK*SRSFRD
Trigger: ATCGCGAAAGCTCCTACTCCACTTGAAAGTGATCAA...TGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGGAGCAACACCATTGCTaGTCATTCCCACTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEEQHHC*SFPLVN
Trigger: GTTTACCAGTGGGAATGACCAGCAATGGTGTTGCTC...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGAGCAACACCATTGCTaGTCATTCCCACTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNEQHHC*SFPLVN
Trigger: GTTTACCAGTGGGAATGACCAGCAATGGTGTTGCTC...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGAGCAACACCATTGCTaGTCATTCCCACTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEEQHHC*SFPLVN
Trigger: GTTTACCAGTGGGAATGACCAGCAATGGTGTTGCTC...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACAAACGAAGGTGTGGATaGCATATTATAGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYKRRCG*HIIEVK
Trigger: CTTAACTTCTATAATATGCCATCCACACCTTCGTTT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATGCCACCTGGAGGTCTaGGACAGTGGGTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTCHLEV*DSGSVM
Trigger: CATGACAGACCCACTGTCCCAGACCTCCAGGTGGCA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp GTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTGGTTGTTGAGTAAGTCCTaGCACAGACCTCCATTGACA +
Preference number: 4 (lower is better)
Translates to: VTEPIVVKMSEIKSSANWLLSKS*HRPPLT
Trigger: TGTCAATGGAGGTCTGTGCCAGGACTTACTCAACAA...CCAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS-3UTR CCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCAACAGAAGCAACAATaGCCAGCAAGAGGATCAGTA +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAQQKQQ*PARGSV
Trigger: TACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCAATAATCCAGGGTTTTaGATGAGTTCCATGCATTGT +
Preference number: 4 (lower is better)
Translates to: WAMPTPVSMLKSISVVATNNPGF*MSSMHC
Trigger: ACAATGCATGGAACTCATCCAAAACCCTGGATTATT...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGAAACCAAGAGAAAAGTaGGCCATGCCTACACCAGTG +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEKPREK*AMPTPV
Trigger: CACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTT...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GGCACAAGGAGAGAGGCTGTATTTTGCCATCTGGAGTCTGCAGGGCAGACCTACACATTGGTTGTGAAATaGGAAGAAAAAGTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: GTRREAVFCHLESAGQTYTLVVK*EEKVCL
Trigger: AAGGCAAACTTTTTCTTCCCATTTCACAACCAATGT...GTAGGTCTGCCCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTCCTTGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGAGGTTTTCACCACGTTaGCTAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMRFSPR*LGWSQT
Trigger: AGTTTGAGACCAGCCTAGCCAACGTGGTGAAAACCT...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTGAAGCACACTCATCGTaGTCTATCTCACAGAATCTT +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAEAHSS*SISQNL
Trigger: AAGATTCTGTGAGATAGATCACGATGAGTGTGCTTC...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAATCCATATTGTTTCTCTaGGGACAGCTCCACACATTC +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLESILFL*GQLHTF
Trigger: GAATGTGTGGAGCTGTCCTCAGAGAAACAATATGGA...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCCATATTGTTTCTCTaGGGACAGCTCCACACATTC +
Preference number: 4 (lower is better)
Translates to: SNKATVTEPIVVKMSEIKSILFL*GQLHTF
Trigger: GAATGTGTGGAGCTGTCCTCAGAGAAACAATATGGA...CTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGATACAGACATAACCTaGGGCTTCATGGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEDTDIT*GFMVAE
Trigger: TTCAGCTACCATGAAGCCTCAGGTTATGTCTGTATC...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGATACAGACATAACCTaGGGCTTCATGGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: KRISNKATVTEPIVVKMSDTDIT*GFMVAE
Trigger: TTCAGCTACCATGAAGCCTCAGGTTATGTCTGTATC...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGATACAGACATAACCTaGGGCTTCATGGTAGCTGAA +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKDTDIT*GFMVAE
Trigger: TTCAGCTACCATGAAGCCTCAGGTTATGTCTGTATC...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATATTGAAGAACATTCATTaGCGTCTTCTTCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTILKNIH*RLLRSG
Trigger: TCCACTGCGAAGAAGACGTCAATGAATGTTCTTCAA...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GAGGTGACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACAATTTTGGCAAGGGTTTaGAGAACATTCATTGACGTC +
Preference number: 4 (lower is better)
Translates to: EVTTEATMASKRISNKATILARV*RTFIDV
Trigger: GACGTCAATGAATGTTCTTCAAACCCTTGCCAAAAT...TGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTTATTTAGACATTGCTaGTGGGTACAGCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLLFRHC*WVQPRR
Trigger: TCTCCTGGGCTGTACCCATCAGCAATGTCTAAATAA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGGAACAGTCTGAAACCTaGGGGCTATGTTACAAACTG +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEEQSET*GLCYKL
Trigger: CAGTTTGTAACATAGCCCTCAGGTTTCAGACTGTTC...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGAACAGAAGCACCTTTaGCTGATTATTGACCTGAAT +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHEQKHL*LIIDLN
Trigger: ATTCAGGTCAATAATCAGTCAAAGGTGCTTCTGTTC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGTGGTGTTGTGGGAAATaGACAGAAGCACCTTTGACT +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMWCCGK*TEAPLT
Trigger: AGTCAAAGGTGCTTCTGTTCATTTCCCACAACACCA...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGTGGTGTTGTGGGAAATaGACAGAAGCACCTTTGACT +
Preference number: 4 (lower is better)
Translates to: KRISNKATVTEPIVVKMSWCCGK*TEAPLT
Trigger: AGTCAAAGGTGCTTCTGTTCATTTCCCACAACACCA...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTAGTAAGCCTGATGGTTaGAGCGTTCGGACAAACATG +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPSKPDG*SVRTNM
Trigger: CATGTTTGTCCGAACGCTTCAACCATCAGGCTTACT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGCCACCAATGTAGATaGCATCTCCCTTTTCGATTT +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKGHQCR*HLPFRF
Trigger: AAATCGAAAAGGGAGATGTCATCTACATTGGTGGCC...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp AAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGGCCACCAATGTAGATaGCATCTCCCTTTTCGATTT +
Preference number: 4 (lower is better)
Translates to: KATVTEPIVVKMSEIKSSGHQCR*HLPFRF
Trigger: AAATCGAAAAGGGAGATGTCATCTACATTGGTGGCC...AGATGACTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCACAGCCAGTGACCACTaGATTGGTAGAGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLTASDH*IGRDFE
Trigger: CTCAAAATCTCTACCAATTCAGTGGTCACTGGCTGT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACAAGCATTCATCGATGTTaGGTTCACAGTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTSIHRC*VHSVSL
Trigger: CAGGGAAACACTGTGAACTCAACATCGATGAATGCT...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GTCGGAGATCAAGTCATCTGCCAACTGGAAAGATTGAAATCATTGGGATGCGAACAAGGCGACAGTCACTaGGCCAATAGTGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: VGDQVICQLERLKSLGCEQGDSH*ANSGEN
Trigger: ATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTG...TTCGCATCCCAATGATTTCAATCTTTCCAGTTGGCAGATGACTTGATCTCCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS-3UTR TCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCCAAGGCGACAGTCACTaGGCCAATAGTGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRQGDSH*ANSGEN
Trigger: ATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTG...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGACCCTCGATGATACATaGGATGGAAGAACACCTTTC +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMTLDDT*DGRTPF
Trigger: GAAAGGTGTTCTTCCATCTCATGTATCATCGAGGGT...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGGGAGGGAGACTTCTCTaGTTAGATCTGAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMGGRLL*LDLSKT
Trigger: AGTTTTGCTCAGATCTAATCAGAGAAGTCTCCCTCC...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGCAGGCCCAGAGATCTAAAATaGATCAAGGCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GSPSRRDTMLLNQSLHCRPRDLK*IKAFLE
Trigger: TTCAAGAAATGCCTTGATTCATTTTAGATCTCTGGG...CCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGGTGTTGAGTTCACAGTaGTCCCCCAGGAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMVLSSQ*SPRNPG
Trigger: CCCTGGATTCCTGGGGGATCACTGTGAACTCAACAC...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCACAGTGTGTCCCTGTaGATCCACTACCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMHSVSL*IHYPCS
Trigger: ACTGCACGGGTAGTGGATTCACAGGGACACACTGTG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 4 (lower is better)
Translates to: SVWIPISKGHNAPKSVSPYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...TGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR GCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCTTGGAAGTGAGGGATaGATGTTCCATTATTTAGAC +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHLGSEG*MFHYLD
Trigger: GTCTAAATAATGGAACATGCATCCCTCACTTCCAAG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GCTGTAGGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATCAAACACATCCCTGTTaGTTCGGAAAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: AVGSLSCPFVGGDNRSNNQTHPC*FGKVEE
Trigger: CTCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTG...ATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACCTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATTTAAGTTCAGTCTCTTaGTTGTCAGGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNLSSVS*LSGRPP
Trigger: TGGTGGCCTACCTGACAAGCAAGAGACTGAACTTAA...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTTCACTTCGTGCCATGTaGCATCATTCACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPSLRAM*HHSLTA
Trigger: TGCAGTCAGTGAATGATGGCACATGGCACGAAGTGA...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCTTGTCCACTTCCATTTaGCACCTGGAGGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTLSTSI*HLEVWD
Trigger: GTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAA...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAGCAGGTGGCTCCATTTaGACACTGGTGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVAGGSI*TLVTLA
Trigger: TGCCAGAGTCACCAGTGTGCAAATGGAGCCACCTGC...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTTCCCAACTCAGTGAGTaGCCTTCCCACATTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPSQLSE*PSHIGL
Trigger: CAGACCAATGTGGGAAGGGCACTCACTGAGTTGGGA...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS-3UTR CCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGCCATCAATTCCATCCTaGCACACGGCCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKPSIPS*HTAPFW
Trigger: CCAAAATGGGGCCGTGTGCCAGGATGGAATTGATGG...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTCCATCAATTCCATCCTaGCACACGGCCCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPPSIPS*HTAPFW
Trigger: CCAAAATGGGGCCGTGTGCCAGGATGGAATTGATGG...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAACCTCAAATGAAAGTGTaGTTGCGATTTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEPQMKV*LRFHTG
Trigger: CCCTGTGTGAAATCGCAACCACACTTTCATTTGAGG...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATATTGATCACTTTCAAGTaGAGTAGGAGCTTTCGCGAT +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTILITFK*SRSFRD
Trigger: ATCGCGAAAGCTCCTACTCCACTTGAAAGTGATCAA...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGTCTCCAGCACAGCCTTaGGTTACATTGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMSPAQP*VTLTRT
Trigger: AGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGA...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTCTCCAGCACAGCCTTaGGTTACATTGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLSPAQP*VTLTRT
Trigger: AGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGCATGCAAACAGGGGTTaGAGTTGCAGACATTTAACT +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGHANRG*SCRHLT
Trigger: AGTTAAATGTCTGCAACTCCAACCCCTGTTTGCATG...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACATTGTTGAGTAAGTCCTaGCACAGACCTCCATTGACA +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTLLSKS*HRPPLT
Trigger: TGTCAATGGAGGTCTGTGCCAGGACTTACTCAACAA...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTTGTTGAGTAAGTCCTaGCACAGACCTCCATTGACA +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLLLSKS*HRPPLT
Trigger: TGTCAATGGAGGTCTGTGCCAGGACTTACTCAACAA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCAACAGAAGCAACAATaGCCAGCAAGAGGATCAGTA +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIQQKQQ*PARGSV
Trigger: TACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATACCATATCCAGAAGTGTaGGCTTGTTCTTCAATGTCA +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTIPYPEV*ACSSMS
Trigger: TGACATTGAAGAACAAGCCCACACTTCTGGATATGG...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTACTGCAGCAAACGTGTaGATAGGCCCTTTATACGTC +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPTAANV*IGPLYV
Trigger: GACGTATAAAGGGCCTATCCACACGTTTGCTGCAGT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGCATTTCCCTAGGCCATaGGAGATAGCCCACTATTTT +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMHFPRP*EIAHYF
Trigger: AAAATAGTGGGCTATCTCCCATGGCCTAGGGAAATG...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATAACTCTGCTAAGACCTTaGGATAGAACAGCAACTAAG +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTITLLRP*DRTATK
Trigger: CTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGT...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCTGGTGTGTTGCTGGTaGTCTGGTCCCAGTCCGGCT +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQLVCCW*SGPSPA
Trigger: AGCCGGACTGGGACCAGACCACCAGCAACACACCAG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAAGGTCGATCTCACACTaGGCACCTGTGTATCCAGGC +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTRSISH*APVYPG
Trigger: GCCTGGATACACAGGTGCCCAGTGTGAGATCGACCT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATAAGAAGGCAGTCCAGTaGTGCGTCCATATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHKKAVQ*CVHIVS
Trigger: AGAAACAATATGGACGCATCACTGGACTGCCTTCTT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCGCAGTGGATTCCTGTaGATCCAGGCTGACAGATAC +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVRSGFL*IQADRY
Trigger: GTATCTGTCAGCCTGGATTCACAGGAATCCACTGCG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACACGCAGTGGATTCCTGTaGATCCAGGCTGACAGATAC +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTRSGFL*IQADRY
Trigger: GTATCTGTCAGCCTGGATTCACAGGAATCCACTGCG...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTTGAAGAACATTCATTaGCGTCTTCTTCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLLKNIH*RLLRSG
Trigger: TCCACTGCGAAGAAGACGTCAATGAATGTTCTTCAA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTTTGAAGAACATTCATTaGCGTCTTCTTCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: KATVTEPIVVKMSEIKSSLKNIH*RLLRSG
Trigger: TCCACTGCGAAGAAGACGTCAATGAATGTTCTTCAA...AGATGACTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAATCACTGAGCCACTTTTaGCCCACAGGAAGCCATCGC +
Preference number: 4 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIESLSHF*PTGSHR
Trigger: GCGATGGCTTCCTGTGGGTCAAAAGTGGCTCAGTGA...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTAGCCCTTGGTTGTCACTaGGCCACTTTTGACCCACAG +
Preference number: 4 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLALGCH*ATFDPQ
Trigger: CTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGC...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTGAACAGAAGCACCTTTaGCTGATTATTGACCTGAAT +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAEQKHL*LIIDLN
Trigger: ATTCAGGTCAATAATCAGTCAAAGGTGCTTCTGTTC...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCTGAAAAGCACATATTaGTTGATCACTTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHLKSTY*LITFKW
Trigger: CCACTTGAAAGTGATCAATCAATATGTGCTTTTCAG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCAGCGTCCTCTGCTTTaGCAAGGTTGGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMQRPLL*QGWLSH
Trigger: GTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCAGCCACAAGTTaGTGCAGCGTCCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTNSATS*CSVLCF
Trigger: AAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTT...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCAAACACCTCCATTGTaGCAGGGGTTGGACTTGCAG +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVQTPPL*QGLDLQ
Trigger: CTGCAAGTCCAACCCCTGTCACAATGGAGGTGTTTG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367400.8
ENST00000484075.5
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCGTGAGGACACGGGCTaGATCCACACCACTGAACCT +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQREDTG*IHTTEP
Trigger: AGGTTCAGTGGTGTGGATTCAGCCCGTGTCCTCACG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTTGTGCCATCATTCACTaGCTGCAAACTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPCAIIH*LQTCQT
Trigger: AGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACA...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTGACAGAGTGAGTTTCTaGTCATTTTGGACCATATCC +
Preference number: 4 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQADRVSF*SFWTIS
Trigger: GGATATGGTCCAAAATGATCAGAAACTCACTCTGTC...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTCGCAGTGGATTCCTATaGGCATTGCCATTAAAATGT +
Preference number: 4 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQARSGFL*ALPLKC
Trigger: ACATTTTAATGGCAATGCTCATAGGAATCCACTGCG...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTGCTCCCAGTTTGAAATaGTTGTCACTACTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPAPSLK*LSLLQR
Trigger: CCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGC...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACACCATGGAGACAAGGTTaGCTGGCACACTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTPWRQG*LAHSSV
Trigger: CACTGATGAGTGTGCCAGTCAACCTTGTCTCCATGG...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACCATGTAGCATTATTGTaGCAAGGTTTTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHHVALL*QGFDQQ
Trigger: TTGTTGGTCAAAACCTTGTCACAATAATGCTACATG...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGTATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTACCAAGTCGCAGTGTCTaGCTTGATATCCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVPSRSV*LDILGH
Trigger: GTGTCCCAGGATATCAAGGCAGACACTGCGACTTGG...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCCAAGTCGCAGTGTCTaGCTTGATATCCTGGGACAC +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMPSRSV*LDILGH
Trigger: GTGTCCCAGGATATCAAGGCAGACACTGCGACTTGG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGGCAGAGCAACACCATTaGTGGTCATTCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKAEQHH*WSFPLV
Trigger: TACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGC...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACCATCATTCACTGACTaGAAACTTGTCAGACTTAGC +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTPSFTD*KLVRLS
Trigger: GCTAAGTCTGACAAGTTTGCAGTCAGTGAATGATGG...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCCATCATTCACTGACTaGAAACTTGTCAGACTTAGC +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIPSFTD*KLVRLS
Trigger: GCTAAGTCTGACAAGTTTGCAGTCAGTGAATGATGG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATCCATCATTCACTGACTaGAAACTTGTCAGACTTAGC +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNPSFTD*KLVRLS
Trigger: GCTAAGTCTGACAAGTTTGCAGTCAGTGAATGATGG...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAATCCAGGCTCACATGTaGAGTGGTAGGCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTIQAHM*SGRLQL
Trigger: GAGTTGCAGCCTACCACTGCACATGTGAGCCTGGAT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATACTGTTGAGGGTAATCTaGTCTGTCTGCAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTILLRVI*SVCKIF
Trigger: GAAAATTTTGCAGACAGAGCAGATTACCCTCAACAG...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCTGTTGAGGGTAATCTaGTCTGTCTGCAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNALLRVI*SVCKIF
Trigger: GAAAATTTTGCAGACAGAGCAGATTACCCTCAACAG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTCAGTCTGGAACTCTGTaGAGTTGCCTCCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPQSGTL*SCLHCS
Trigger: GCTACAATGGAGGCAACTGCACAGAGTTCCAGACTG...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCGCAGCTCAACCTTACTaGAGCAAACGTGTGGATAGG +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTAAQPY*SKRVDR
Trigger: CCTATCCACACGTTTGCTGCAGTAAGGTTGAGCTGC...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCGAGAAAAGTGGGCCATaGCTACACCAGTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTEKSGP*LHQCQC
Trigger: GCATTGACACTGGTGTAGGCATGGCCCACTTTTCTC...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCTTCAAGCAAGTCTCCTaGTTCACCCTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTFKQVS*FTLLSS
Trigger: GCTACTCAGGAGGGTGAAGCAGGAGACTTGCTTGAA...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGCAGTGTAATCCCAGTTaGAGATTAACATTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGQCNPS*RLTLSG
Trigger: ACCTGACAATGTTAATCTGCAACTGGGATTACACTG...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp ATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCCAGTGTAATCCCAGTTaGAGATTAACATTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: IHSVWIPISKGHNAPKSVQCNPS*RLTLSG
Trigger: ACCTGACAATGTTAATCTGCAACTGGGATTACACTG...GACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGCACACGGCCCCATTTTaGCAAGGGCTGGAAGCACAC +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLHTAPF*QGLEAH
Trigger: GTGTGCTTCCAGCCCTTGCCAAAATGGGGCCGTGTG...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCCCTCAAATGAAAGTGTaGTTGCGATTTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRPQMKV*LRFHTG
Trigger: CCCTGTGTGAAATCGCAACCACACTTTCATTTGAGG...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGCCATCGCTGGTGTTGTaGGAAATGAACAGAAGCACC +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKPSLVL*EMNRST
Trigger: GGTGCTTCTGTTCATTTCCCACAACACCAGCGATGG...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTTGATCACTTTCAAGTaGAGTAGGAGCTTTCGCGAT +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLLITFK*SRSFRD
Trigger: ATCGCGAAAGCTCCTACTCCACTTGAAAGTGATCAA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAACTCTCTCAGACAGTTaGGGCCTTCATAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVTLSDS*GLHRAC
Trigger: ACAGGCCCTATGAAGGCCCCAACTGTCTGAGAGAGT...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTACAGTGGGTCTGTCATaGAAAGGGTCACTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: KGHLPGSTHISIILLTMLTVGLS*KGSLRA
Trigger: GGCACGAAGTGACCCTTTCCATGACAGACCCACTGT...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAACAGTGGGTCTGTCATaGAAAGGGTCACTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVTVGLS*KGSLRA
Trigger: GGCACGAAGTGACCCTTTCCATGACAGACCCACTGT...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTACTTCCATTTGCCACCTaGAGGTCTGGGACAGTGGGT +
Preference number: 4 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLLPFAT*RSGTVG
Trigger: ACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAG...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATTCAGAGCAGTTGCCATaGATACAGGGGTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHSEQLP*IQGFEK
Trigger: CTTTTCAAACCCCTGTATCCATGGCAACTGCTCTGA...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTTGTTGAGTAAGTCCTaGCACAGACCTCCATTGACA +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRLLSKS*HRPPLT
Trigger: TGTCAATGGAGGTCTGTGCCAGGACTTACTCAACAA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATACATCACAGAGGCACTaGAATTTGTTGAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNTSQRH*NLLSKS
Trigger: GGACTTACTCAACAAATTCCAGTGCCTCTGTGATGT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTACATCACAGAGGCACTaGAATTTGTTGAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: KATVTEPIVVKMSEIKSSTSQRH*NLLSKS
Trigger: GGACTTACTCAACAAATTCCAGTGCCTCTGTGATGT...AGATGACTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAACATCACAGAGGCACTaGAATTTGTTGAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLETSQRH*NLLSKS
Trigger: GGACTTACTCAACAAATTCCAGTGCCTCTGTGATGT...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCCAACAGAAGCAACAATaGCCAGCAAGAGGATCAGTA +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRQQKQQ*PARGSV
Trigger: TACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTG...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGCCATTTAAACAAGGCTaGGACCAACATTCGTCAATT +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGPFKQG*DQHSSI
Trigger: AATTGACGAATGTTGGTCCCAGCCTTGTTTAAATGG...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCCGAAACAGTGAAACTTaGTACTTAGGTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLRNSET*YLGPLD
Trigger: ATCCAGAGGACCTAAGTACCAAGTTTCACTGTTTCG...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS-3UTR TCA 90 bp ATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTATGTAGATAAGCAGTaGGAAACTGAGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: IHSVWIPISKGHNAPKSVYVDKQ*ETEVED
Trigger: ATCTTCTACCTCAGTTTCTCACTGCTTATCTACATA...GACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTTATGTAGATAAGCAGTaGGAAACTGAGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAYVDKQ*ETEVED
Trigger: ATCTTCTACCTCAGTTTCTCACTGCTTATCTACATA...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACACAAGTGGCACTTCCTTaGCAGGGATTGGAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTQVALP*QGLEKQ
Trigger: TTGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTG...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAAGGCTTCATGGTAGCTaGAAGAAGAAGGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTRLHGS*KKKAVQ
Trigger: CTGGACTGCCTTCTTCTTTCAGCTACCATGAAGCCT...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAAGGCTTCATGGTAGCTaGAAGAAGAAGGCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTRLHGS*KKKAVQ
Trigger: CTGGACTGCCTTCTTCTTTCAGCTACCATGAAGCCT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTATTTTGGCAAGGGTTTaGAGAACATTCATTGACGTC +
Preference number: 4 (lower is better)
Translates to: YVTNTLLRPWDRTATKAAILARV*RTFIDV
Trigger: GACGTCAATGAATGTTCTTCAAACCCTTGCCAAAAT...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCATTTTGGCAAGGGTTTaGAGAACATTCATTGACGTC +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLILARV*RTFIDV
Trigger: GACGTCAATGAATGTTCTTCAAACCCTTGCCAAAAT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAGCCATCGCCCTCAAATaGAAGTGTGGTTGCGATTTC +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTAIALK*KCGCDF
Trigger: GAAATCGCAACCACACTTTCATTTGAGGGCGATGGC...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCTGAAAAGCACATATTaGTTGATCACTTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNALKSTY*LITFKW
Trigger: CCACTTGAAAGTGATCAATCAATATGTGCTTTTCAG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGAACTCAGCCACAAGTTaGTGCAGCGTCCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMNSATS*CSVLCF
Trigger: AAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTT...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCAAACATGGAGAGGCTaGTGGTGTCTCCATAGCTCT +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVQTWRG*WCLHSS
Trigger: AGAGCTATGGAGACACCATCAGCCTCTCCATGTTTG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAATACATTCAAATCCTTaGAGCACCGGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTIHSNP*STGWHW
Trigger: CCAGTGCCAGCCGGTGCTTCAAGGATTTGAATGTAT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAATACATTCAAATCCTTaGAGCACCGGCTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVIHSNP*STGWHW
Trigger: CCAGTGCCAGCCGGTGCTTCAAGGATTTGAATGTAT...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCCCATTTGCACACTGGTaGCTCTGGCAGTTGTCTATA +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTPFAHW*LWQLSI
Trigger: TATAGACAACTGCCAGAGTCACCAGTGTGCAAATGG...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCGGCACTGGAATTTGTTaGGTAAGTCCTGGCACAGAC +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVGTGIC*VSPGTD
Trigger: GTCTGTGCCAGGACTTACTCAACAAATTCCAGTGCC...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTCCCTTTTGTTGGAGGTaGCAACAGAAGCAACAATGG +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPPFCWR*QQKQQW
Trigger: CCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGG...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGCCCTTTTGTTGGAGGTaGCAACAGAAGCAACAATGG +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKPFCWR*QQKQQW
Trigger: CCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGG...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATAAATTCCTGTATGAGGTaGAGAACAGTTGAAGAGTTT +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTINSCMR*RTVEEF
Trigger: AAACTCTTCAACTGTTCTTCACCTCATACAGGAATT...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTTTATCTTACCCTCGATaGTACATGAGATGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: YVTNTLLRPWDRTATKAALSYPR*YMRWKN
Trigger: GTTCTTCCATCTCATGTATCATCGAGGGTAAGATAA...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAGCCCCCAGAGCATCCTaGCAAGTTGCACCATTTAAA +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTAPRAS*QVAPFK
Trigger: TTTAAATGGTGCAACTTGTCAGGATGCTCTGGGGGC...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAGCCCCCAGAGCATCCTaGCAAGTTGCACCATTTAAA +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTAPRAS*QVAPFK
Trigger: TTTAAATGGTGCAACTTGTCAGGATGCTCTGGGGGC...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTACACACTCATCAGTGTTaGGTTCACAGTGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVHTHQC*VHSDPP
Trigger: TGGGGGATCACTGTGAACTCAACACTGATGAGTGTG...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTACCCAGGAGGACATTTaGACAGAAAGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPTQEDI*TESSFL
Trigger: GAGAAAGGAGCTTTCTGTGCAAATGTCCTCCTGGGT...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGACCCAGGAGGACATTTaGACAGAAAGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKTQEDI*TESSFL
Trigger: GAGAAAGGAGCTTTCTGTGCAAATGTCCTCCTGGGT...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATCTTGGAAGTGAGGGATaGATGTTCCATTATTTAGAC +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNLGSEG*MFHYLD
Trigger: GTCTAAATAATGGAACATGCATCCCTCACTTCCAAG...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAATTACCTCCACGAAATaGCACTCTCCATCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTITSTK*HSPSLV
Trigger: CACCAGCGATGGAGAGTGGCATTTCGTGGAGGTAAT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCTGGCCAAATCTGCCTaGCACATACTCTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMLAKSA*HILSQT
Trigger: TGTCTGAGAGAGTATGTGGCAGGCAGATTTGGCCAG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGGAAAGGGTCACTTCGTaGCATGTGCCATCATTCACT +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKERVTS*HVPSFT
Trigger: AGTGAATGATGGCACATGGCACGAAGTGACCCTTTC...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCGTACTTAGACACCCTTaGAGGCCCTTTATATTGTCA +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRVLRHP*RPFILS
Trigger: TGACAATATAAAGGGCCTGCAAGGGTGTCTAAGTAC...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATGTACTTAGACACCCTTaGAGGCCCTTTATATTGTCA +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHVLRHP*RPFILS
Trigger: TGACAATATAAAGGGCCTGCAAGGGTGTCTAAGTAC...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAAATCCAGGCTCACATGTaGAGTGGTAGGCTGCAACTC +
Preference number: 4 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIEIQAHM*SGRLQL
Trigger: GAGTTGCAGCCTACCACTGCACATGTGAGCCTGGAT...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGGCAGGTGGCTCCATTTaGACACTGGTGACTCTGGCA +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLAGGSI*TLVTLA
Trigger: TGCCAGAGTCACCAGTGTGCAAATGGAGCCACCTGC...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGCTGTTGAGGGTAATCTaGTCTGTCTGCAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKLLRVI*SVCKIF
Trigger: GAAAATTTTGCAGACAGAGCAGATTACCCTCAACAG...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACAGTCTGGAACTCTGTaGAGTTGCCTCCATTGTAGC +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTQSGTL*SCLHCS
Trigger: GCTACAATGGAGGCAACTGCACAGAGTTCCAGACTG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCGTAGGTTCCCTGAGTTaGCCTTTTGTTGGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVVGSLS*PFVGGD
Trigger: GTCACCTCCAACAAAAGGGCAACTCAGGGAACCTAC...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGAATCAGTCTCTCCATTaGAGGGGGTGGCATCAAGTT +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKNQSLH*RGWHQV
Trigger: AACTTGATGCCACCCCCTGCAATGGAGAGACTGATT...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAATCCAAAGGGCACTTaGCAGGGAGCACTCACATAT +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTNPKGT*QGALTY
Trigger: ATATGTGAGTGCTCCCTGGCAAGTGCCCTTTGGATT...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCAGAACCAAAATTGGTaGAACAGAAAGCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEQNQNW*NRKQNV
Trigger: CACATTCTGCTTTCTGTTGCACCAATTTTGGTTCTG...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAGGGTGTTCACACAAGTaGCACTTCCTTGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTGCSHK*HFLDRD
Trigger: ATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCC...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTCAAATACCTCCATGTTaGCAGGAGTTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPQIPPC*QEFLPQ
Trigger: CTGTGGCAAGAACTCCTGCCAACATGGAGGTATTTG...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCACGTCTTCTTCGCAGTaGATTCCTGTGAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVTSSSQ*IPVNPG
Trigger: GCCTGGATTCACAGGAATCCACTGCGAAGAAGACGT...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATTTGATCACTTTCAAGTaGAGTAGGAGCTTTCGCGAT +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHLITFK*SRSFRD
Trigger: ATCGCGAAAGCTCCTACTCCACTTGAAAGTGATCAA...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGGAGCAACACCATTGCTaGTCATTCCCACTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKEQHHC*SFPLVN
Trigger: GTTTACCAGTGGGAATGACCAGCAATGGTGTTGCTC...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCATGCAAACAGGGGTTaGAGTTGCAGACATTTAACT +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPHANRG*SCRHLT
Trigger: AGTTAAATGTCTGCAACTCCAACCCCTGTTTGCATG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAACATTTTAATTCAGTCTaGAACTCTGTGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEHFNSV*NSVQLP
Trigger: AGGCAACTGCACAGAGTTCCAGACTGAATTAAAATG...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGCATTTTAATTCAGTCTaGAACTCTGTGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKHFNSV*NSVQLP
Trigger: AGGCAACTGCACAGAGTTCCAGACTGAATTAAAATG...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATACATCACAGAGGCACTaGAATTTGTTGAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHTSQRH*NLLSKS
Trigger: GGACTTACTCAACAAATTCCAGTGCCTCTGTGATGT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACATTTGCCTTATCTCTCTaGAACAGCACAGTCTTATCT +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTFALSL*NSTVLS
Trigger: AGATAAGACTGTGCTGTTCCAGAGAGATAAGGCAAA...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCCATGTGAACCACCACACCTaGCCTGTAATTCTCAATTTT +
Preference number: 4 (lower is better)
Translates to: FPVFSAGHRLPEAIDQLHVNHHT*PVILNF
Trigger: AAAATTGAGAATTACAGGCCAGGTGTGGTGGTTCAC...ATGGAGTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATCCATTTAAACAAGGCTaGGACCAACATTCGTCAATT +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNPFKQG*DQHSSI
Trigger: AATTGACGAATGTTGGTCCCAGCCTTGTTTAAATGG...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTACACATTCACAGTGTGTaGATCCCCATCTCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVHIHSV*IPISKG
Trigger: TCCCTTCGAGATGGGGATCCACACACTGTGAATGTG...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGTCGCAGTGTCTGCCTTaGTATCCTGGGACACAGAAG +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLSQCLP*YPGTQK
Trigger: CTTCTGTGTCCCAGGATATCAAGGCAGACACTGCGA...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAGTTCTTGCAGGGATCTaGAGCACATTCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVVLAGI*STFIHF
Trigger: GAAGTGGATGAATGTGCTTCAGATCCCTGCAAGAAC...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGTCCATATTGTTTCTCTaGGGACAGCTCCACACATTC +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKSILFL*GQLHTF
Trigger: GAATGTGTGGAGCTGTCCTCAGAGAAACAATATGGA...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTAAGAAGGCAGTCCAGTaGTGCGTCCATATTGTTTCT +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPKKAVQ*CVHIVS
Trigger: AGAAACAATATGGACGCATCACTGGACTGCCTTCTT...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATATTTTGGCAAGGGTTTaGAGAACATTCATTGACGTC +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHILARV*RTFIDV
Trigger: GACGTCAATGAATGTTCTTCAAACCCTTGCCAAAAT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCATTTTGGCAAGGGTTTaGAGAACATTCATTGACGTC +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRILARV*RTFIDV
Trigger: GACGTCAATGAATGTTCTTCAAACCCTTGCCAAAAT...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTATGGCCATCTTGGAAGTaGGGGATGCATGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVWPSWK*GMHVPL
Trigger: TAATGGAACATGCATCCCTCACTTCCAAGATGGCCA...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCAGCGTCCTCTGCTTTaGCAAGGTTGGCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQQRPLL*QGWLSH
Trigger: GTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCGGCCACCAATGTAGATaGCATCTCCCTTTTCGATTT +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTGHQCR*HLPFRF
Trigger: AAATCGAAAAGGGAGATGTCATCTACATTGGTGGCC...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGGCCACCAATGTAGATaGCATCTCCCTTTTCGATTT +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPGHQCR*HLPFRF
Trigger: AAATCGAAAAGGGAGATGTCATCTACATTGGTGGCC...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGCTGAATCCACACCACTaGACCTCCTCACAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLLNPHH*TSSQAF
Trigger: GAAAGCCTGTGAGGAGGTTCAGTGGTGTGGATTCAG...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAACAGCCAGTGACCACTaGATTGGTAGAGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTETASDH*IGRDFE
Trigger: CTCAAAATCTCTACCAATTCAGTGGTCACTGGCTGT...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGAGCATTCATCGATGTTaGGTTCACAGTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKSIHRC*VHSVSL
Trigger: CAGGGAAACACTGTGAACTCAACATCGATGAATGCT...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTAGGCACTGGAATTTGTTaGGTAAGTCCTGGCACAGAC +
Preference number: 4 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLGTGIC*VSPGTD
Trigger: GTCTGTGCCAGGACTTACTCAACAAATTCCAGTGCC...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCAAGGCGACAGTCACTaGGCCAATAGTGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVQGDSH*ANSGEN
Trigger: ATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTATCCAGGGTTTTGGATaGGTTCCATGCATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: KGHLPGSTHISIILLTMLIQGFG*VPCIVP
Trigger: TGGCACAATGCATGGAACTCATCCAAAACCCTGGAT...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGCCCAGAGATCTAAAATaGATCAAGGCATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMPRDLK*IKAFLE
Trigger: TTCAAGAAATGCCTTGATTCATTTTAGATCTCTGGG...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCCATGGAGACAAGGTTaGCTGGCACACTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQPWRQG*LAHSSV
Trigger: CACTGATGAGTGTGCCAGTCAACCTTGTCTCCATGG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGCCATGGAGACAAGGTTaGCTGGCACACTCATCAGTG +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLPWRQG*LAHSSV
Trigger: CACTGATGAGTGTGCCAGTCAACCTTGTCTCCATGG...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATCATGTAGCATTATTGTaGCAAGGTTTTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNHVALL*QGFDQQ
Trigger: TTGTTGGTCAAAACCTTGTCACAATAATGCTACATG...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAACCCAGGAGGACATTTaGACAGAAAGCTCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTTQEDI*TESSFL
Trigger: GAGAAAGGAGCTTTCTGTGCAAATGTCCTCCTGGGT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATAACTGGATTGAGAGATaGATTGTTTGTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNNWIER*IVCWIW
Trigger: CCAAATCCAACAAACAATGCATCTCTCAATCCAGTT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTCACTTCGTGCCATGTaGCATCATTCACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMSLRAM*HHSLTA
Trigger: TGCAGTCAGTGAATGATGGCACATGGCACGAAGTGA...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATCACTTCGTGCCATGTaGCATCATTCACTGACTGCA +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTSLRAM*HHSLTA
Trigger: TGCAGTCAGTGAATGATGGCACATGGCACGAAGTGA...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTTGAAATCATTGGGATaGGAATTCTATAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLLKSLG*EFYSKG
Trigger: GCCTTTGCTATAGAATTCGCATCCCAATGATTTCAA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS-3UTR GCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATGTAATCTGCTCTGTCTaGAAAATTTTCCTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHVICSV*KIFLSD
Trigger: GTCTGAGAGGAAAATTTTGCAGACAGAGCAGATTAC...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538660.5
CDS-3UTR CCA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGAATTTGAGAGGCACCTaGTGTTGTTTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGNLRGT*CCFYCK
Trigger: TTTGCAATAAAAACAACACCAGGTGCCTCTCAAATT...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACAAATACCTCCATGTTaGCAGGAGTTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTQIPPC*QEFLPQ
Trigger: CTGTGGCAAGAACTCCTGCCAACATGGAGGTATTTG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCCCTCAAATGAAAGTGTaGTTGCGATTTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTPQMKV*LRFHTG
Trigger: CCCTGTGTGAAATCGCAACCACACTTTCATTTGAGG...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAGAGCAACACCATTGCTaGTCATTCCCACTGGTAAAC +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVEQHHC*SFPLVN
Trigger: GTTTACCAGTGGGAATGACCAGCAATGGTGTTGCTC...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATATCAATTTTAATGTCTTaGAGACAGCCTACAAACGAA +
Preference number: 4 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTISILMS*RQPTNE
Trigger: TTCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGA...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTTCAATTTTAATGTCTTaGAGACAGCCTACAAACGAA +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNASILMS*RQPTNE
Trigger: TTCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGA...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACTCTCTCAGACAGTTaGGGCCTTCATAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLTLSDS*GLHRAC
Trigger: ACAGGCCCTATGAAGGCCCCAACTGTCTGAGAGAGT...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTATTTTACTACTAATTTaGGAGAGTTTGGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAILLLI*ESLESA
Trigger: TGCTGACTCCAAACTCTCCCAAATTAGTAGTAAAAT...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTTACATTGACAAGAACTaGATTGAGAGATGCATTGTT +
Preference number: 4 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAYIDKN*IERCIV
Trigger: AACAATGCATCTCTCAATCCAGTTCTTGTCAATGTA...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACAGTGGGTCTGTCATaGAAAGGGTCACTTCGTGCC +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLTVGLS*KGSLRA
Trigger: GGCACGAAGTGACCCTTTCCATGACAGACCCACTGT...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTTTGTTGAGTAAGTCCTaGCACAGACCTCCATTGACA +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPLLSKS*HRPPLT
Trigger: TGTCAATGGAGGTCTGTGCCAGGACTTACTCAACAA...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTTTGCAGAACCAAAATTaGTGCAACAGAAAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: YVTNTLLRPWDRTATKAALQNQN*CNRKQN
Trigger: ATTCTGCTTTCTGTTGCACCAATTTTGGTTCTGCAA...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTACCCCACTCAACAACTaGCTCGTCATTCATACGCAA +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIITPLNN*LVIHTQ
Trigger: TTGCGTATGAATGACGAGCCAGTTGTTGAGTGGGGT...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACAGGGAAGAAATTGCAGTaGTCATTCACATATAGAAGT +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTGKKLQ*SFTYRS
Trigger: ACTTCTATATGTGAATGACCACTGCAATTTCTTCCC...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGATAGATGGCATCCAATaGATAAACTGTCCTCATGTT +
Preference number: 4 (lower is better)
Translates to: LETKRKVGHAYTSVNAQEIDGIQ*INCPHV
Trigger: AACATGAGGACAGTTTATCCATTGGATGCCATCTAT...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCATTTAAACAAGGCTaGGACCAACATTCGTCAATT +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHPFKQG*DQHSSI
Trigger: AATTGACGAATGTTGGTCCCAGCCTTGTTTAAATGG...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGAATATAATAAAACAATaGTGTCGAGCGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKNIIKQ*CRAEPL
Trigger: CAGTGGTTCCGCTCGACACCATTGTTTTATTATATT...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATAATATAATAAAACAATaGTGTCGAGCGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNNIIKQ*CRAEPL
Trigger: CAGTGGTTCCGCTCGACACCATTGTTTTATTATATT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAAATATAATAAAACAATaGTGTCGAGCGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLENIIKQ*CRAEPL
Trigger: CAGTGGTTCCGCTCGACACCATTGTTTTATTATATT...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGGCGACAGTCACTTATACATCCCATCGCTaGTATACAACAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: TTEATMASKRISNKATVTYTSHR*YTTITL
Trigger: CAAAGTTATTGTTGTATACCAGCGATGGGATGTATA...AGTGACTGTCGCCTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGCCAACCAGAGCAAGCTaGTACCACTCAGTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLPTRAS*YHSVVH
Trigger: GTGGACTACTGAGTGGTACCAGCTTGCTCTGGTTGG...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
3UTR CAA 72 bp CTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTaGCCACCTTATATAAATGTTCAGTTTATTAGGGGC +
Preference number: 4 (lower is better)
Translates to: LHQCQCSRALVW*PPYINVQFIRG
Trigger: GCCCCTAATAAACTGAACATTTATATAAGGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
3UTR CAA 72 bp AATGTCGGAGATCAAGTCATCTGCCAACTGGAAAGATaGAAATCATTGGGATGCGAATTCTATAGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NVGDQVICQLER*KSLGCEFYSKG
Trigger: GCCTTTGCTATAGAATTCGCATCCCAATGATTTCAATCTTTCCAGTTGGCAGATGACTTGATCTCCGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS-3UTR TCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGCACACTCATCGTaGTCTATCTCACAGAATCTT +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPEAHSS*SISQNL
Trigger: AAGATTCTGTGAGATAGATCACGATGAGTGTGCTTC...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGGAAGCACACTCATCGTaGTCTATCTCACAGAATCTT +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKEAHSS*SISQNL
Trigger: AAGATTCTGTGAGATAGATCACGATGAGTGTGCTTC...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATACTATTGCATTCATTaGGGTCGATCTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTYYCIH*GRSHTG
Trigger: CCCAGTGTGAGATCGACCTCAATGAATGCAATAGTA...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATACTATTGCATTCATTaGGGTCGATCTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTYYCIH*GRSHTG
Trigger: CCCAGTGTGAGATCGACCTCAATGAATGCAATAGTA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGTTGAAGAACATTCATTaGCGTCTTCTTCGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKLKNIH*RLLRSG
Trigger: TCCACTGCGAAGAAGACGTCAATGAATGTTCTTCAA...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAGAACAGTCTGAAACCTaGGGGCTATGTTACAAACTG +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTEQSET*GLCYKL
Trigger: CAGTTTGTAACATAGCCCTCAGGTTTCAGACTGTTC...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTGAACAGTCTGAAACCTaGGGGCTATGTTACAAACTG +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIIEQSET*GLCYKL
Trigger: CAGTTTGTAACATAGCCCTCAGGTTTCAGACTGTTC...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCGAACAGTCTGAAACCTaGGGGCTATGTTACAAACTG +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVEQSET*GLCYKL
Trigger: CAGTTTGTAACATAGCCCTCAGGTTTCAGACTGTTC...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCTGAAAAGCACATATTaGTTGATCACTTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPLKSTY*LITFKW
Trigger: CCACTTGAAAGTGATCAATCAATATGTGCTTTTCAG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTTGTGCCATCATTCACTaGCTGCAAACTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIICAIIH*LQTCQT
Trigger: AGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACA...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR TCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTGCCATCATTCACTaGCTGCAAACTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTCAIIH*LQTCQT
Trigger: AGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACA...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCACAGCCAGTGACCACTaGATTGGTAGAGATTTTGAG +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVTASDH*IGRDFE
Trigger: CTCAAAATCTCTACCAATTCAGTGGTCACTGGCTGT...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAAGCATTCATCGATGTTaGGTTCACAGTGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTSIHRC*VHSVSL
Trigger: CAGGGAAACACTGTGAACTCAACATCGATGAATGCT...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAATGACACTATTAAGCTaGAGGTTTAACCAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTEMTLLS*RFNQGR
Trigger: CCTGCCTTGGTTAAACCTTCAGCTTAATAGTGTCAT...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTATTTTCCAAGACAAGTaGCATCAAGTCTCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPIFQDK*HQVSGK
Trigger: TTTACCTGAGACTTGATGTCACTTGTCTTGGAAAAT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTTGTGAATGTAAATATTaGTGGGAAGGTTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPCECKY*WEGFPH
Trigger: ATGGGGAAAACCTTCCCATCAATATTTACATTCACA...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCACACTCATCAGTGTTaGGTTCACAGTGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQHTHQC*VHSDPP
Trigger: TGGGGGATCACTGTGAACTCAACACTGATGAGTGTG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGCAAACACATCCCTGTTaGTTCGGAAAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKQTHPC*FGKVEE
Trigger: CTCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTG...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGATTACCTCCACGAAATaGCACTCTCCATCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQITSTK*HSPSLV
Trigger: CACCAGCGATGGAGAGTGGCATTTCGTGGAGGTAAT...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGGCAGAGCAACACCATTaGTGGTCATTCCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLAEQHH*WSFPLV
Trigger: TACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGC...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCTGGCCAAATCTGCCTaGCACATACTCTCTCAGACA +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQLAKSA*HILSQT
Trigger: TGTCTGAGAGAGTATGTGGCAGGCAGATTTGGCCAG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTTTAAGTTCAGTCTCTTaGTTGTCAGGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIILSSVS*LSGRPP
Trigger: TGGTGGCCTACCTGACAAGCAAGAGACTGAACTTAA...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATTCAAAATGCAGTTTGTaGTTCTTAGCATCACTTACA +
Preference number: 4 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNSKCSL*FLASLT
Trigger: TGTAAGTGATGCTAAGAAGCACAAACTGCATTTTGA...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCGACTTAGATTCAAAATaGAGTTTGTGCTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIDLDSK*SLCFLA
Trigger: TGCTAAGAAGCACAAACTGCATTTTGAATCTAAGTC...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCAATTTGAGAGGCACCTaGTGTTGTTTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPINLRGT*CCFYCK
Trigger: TTTGCAATAAAAACAACACCAGGTGCCTCTCAAATT...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCCTTTGTCCAAATTATTaGCTGTGTCTGAACAAGAAC +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRLCPNY*LCLNKN
Trigger: GTTCTTGTTCAGACACAGCCAATAATTTGGACAAAG...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGGGGTGTTCACACAAGTaGCACTTCCTTGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQGCSHK*HFLDRD
Trigger: ATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCC...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTACCTCAAATGAAAGTGTaGTTGCGATTTCACACAGGG +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVPQMKV*LRFHTG
Trigger: CCCTGTGTGAAATCGCAACCACACTTTCATTTGAGG...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCTACAAACTGAGCCCTTaGTTGTCACTGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVYKLSP*LSLSHF
Trigger: AAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTA...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTACAAACTGAGCCCTTaGTTGTCACTGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMYKLSP*LSLSHF
Trigger: AAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTA...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCAAACGAAGGTGTGGATaGCATATTATAGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIKRRCG*HIIEVK
Trigger: CTTAACTTCTATAATATGCCATCCACACCTTCGTTT...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTCAATTTTAATGTCTTaGAGACAGCCTACAAACGAA +
Preference number: 4 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLSILMS*RQPTNE
Trigger: TTCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACAATTTTACTACTAATTTaGGAGAGTTTGGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTILLLI*ESLESA
Trigger: TGCTGACTCCAAACTCTCCCAAATTAGTAGTAAAAT...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACATACATTGACAAGAACTaGATTGAGAGATGCATTGTT +
Preference number: 4 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTYIDKN*IERCIV
Trigger: AACAATGCATCTCTCAATCCAGTTCTTGTCAATGTA...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCTCTCCAGCACAGCCTTaGGTTACATTGACAAGAACT +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVSPAQP*VTLTRT
Trigger: AGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGA...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTTCAGAGCAGTTGCCATaGATACAGGGGTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: KGHLPGSTHISIILLTMLSEQLP*IQGFEK
Trigger: CTTTTCAAACCCCTGTATCCATGGCAACTGCTCTGA...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCTCAGAGCAGTTGCCATaGATACAGGGGTTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVSEQLP*IQGFEK
Trigger: CTTTTCAAACCCCTGTATCCATGGCAACTGCTCTGA...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCTTGTTGAGTAAGTCCTaGCACAGACCTCCATTGACA +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVLLSKS*HRPPLT
Trigger: TGTCAATGGAGGTCTGTGCCAGGACTTACTCAACAA...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACAACAGAAGCAACAATaGCCAGCAAGAGGATCAGTA +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTQQKQQ*PARGSV
Trigger: TACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGAAAACCATGTGTCCTaGCTCCAAACATCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTEENHVS*LQTSFC
Trigger: ACAGAAAGATGTTTGGAGCCAGGACACATGGTTTTC...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAAACGTCTTCTTCGCAGTaGATTCCTATGAGCATTGCC +
Preference number: 4 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIETSSSQ*IPMSIA
Trigger: GGCAATGCTCATAGGAATCCACTGCGAAGAAGACGT...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTTCAAGAGCATTAGTGTaGTTGCCACCTTATATAAAT +
Preference number: 4 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQASRALV*LPPYIN
Trigger: ATTTATATAAGGTGGCAACCACACTAATGCTCTTGA...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTAACCCCACTCAACAACTaGCTCGTCATTCATACGCAA +
Preference number: 4 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLTPLNN*LVIHTQ
Trigger: TTGCGTATGAATGACGAGCCAGTTGTTGAGTGGGGT...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTTACCCAGAAATGGAGTaGGAAGAAATTGCAGTGGTC +
Preference number: 4 (lower is better)
Translates to: KGHLPGSTHISIILLTMLYPEME*EEIAVV
Trigger: GACCACTGCAATTTCTTCCCACTCCATTTCTGGGTA...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAATATACATCCCATCGCTaGTATACAACAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEYTSHR*YTTITL
Trigger: CAAAGTTATTGTTGTATACCAGCGATGGGATGTATA...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTATACATCCCATCGCTaGTATACAACAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: SNKATVTEPIVVKMSEIKYTSHR*YTTITL
Trigger: CAAAGTTATTGTTGTATACCAGCGATGGGATGTATA...CTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGGTTCTTGCAGGGATCTaGAGCACATTCATCCACTTC +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQVLAGI*STFIHF
Trigger: GAAGTGGATGAATGTGCTTCAGATCCCTGCAAGAAC...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGTGGCCATCTTGGAAGTaGGGGATGCATGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQWPSWK*GMHVPL
Trigger: TAATGGAACATGCATCCCTCACTTCCAAGATGGCCA...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGCCATTTGCACACTGGTaGCTCTGGCAGTTGTCTATA +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLPFAHW*LWQLSI
Trigger: TATAGACAACTGCCAGAGTCACCAGTGTGCAAATGG...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCACTAGGTTGACAGAGTaGGTTTCTGATCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTTRLTE*VSDHFG
Trigger: TCCAAAATGATCAGAAACTCACTCTGTCAACCTAGT...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTCAATATCCTTGGATGTaGTGGAAGTCACATTTCCCT +
Preference number: 4 (lower is better)
Translates to: KGHLPGSTHISIILLTMLQYPWM*WKSHFP
Trigger: AGGGAAATGTGACTTCCATCACATCCAAGGATATTG...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAAAGTCTCAGGTAAATTaGAGTTTTCTTCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTEKSQVN*SFLLPG
Trigger: CCCAGGAAGAAGAAAACTTCAATTTACCTGAGACTT...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGTATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCGCCAACTGGAAAGATTaGAATCATTGGGATGCGAAT +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVANWKD*NHWDAN
Trigger: ATTCGCATCCCAATGATTTCAATCTTTCCAGTTGGC...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS-3UTR GCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTCTTGGAAGTGAGGGATaGATGTTCCATTATTTAGAC +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPLGSEG*MFHYLD
Trigger: GTCTAAATAATGGAACATGCATCCCTCACTTCCAAG...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACACAAACACATCCCTGTTaGTTCGGAAAAGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTQTHPC*FGKVEE
Trigger: CTCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTG...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAATTAAGTTCAGTCTCTTaGTTGTCAGGTAGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIELSSVS*LSGRPP
Trigger: TGGTGGCCTACCTGACAAGCAAGAGACTGAACTTAA...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACCATCATTCACTGACTaGAAACTTGTCAGACTTAGC +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTPSFTD*KLVRLS
Trigger: GCTAAGTCTGACAAGTTTGCAGTCAGTGAATGATGG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTGTACTTAGACACCCTTaGAGGCCCTTTATATTGTCA +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIIVLRHP*RPFILS
Trigger: TGACAATATAAAGGGCCTGCAAGGGTGTCTAAGTAC...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATAGTAAGAGAGATAAATaGCTCCGATTTCTATTGTAC +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHSKRDK*LRFLLY
Trigger: GTACAATAGAAATCGGAGGCATTTATCTCTCTTACT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAACCATCATTCAAAACCTaGCAGGATGACACTATTAAG +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTEPSFKT*QDDTIK
Trigger: CTTAATAGTGTCATCCTGGCAGGTTTTGAATGATGG...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTCAGTGTAATCCCAGTTaGAGATTAACATTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPQCNPS*RLTLSG
Trigger: ACCTGACAATGTTAATCTGCAACTGGGATTACACTG...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCAAATACCTCCATGTTaGCAGGAGTTCTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQQIPPC*QEFLPQ
Trigger: CTGTGGCAAGAACTCCTGCCAACATGGAGGTATTTG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTATACAAACTGAGCCCTTaGTTGTCACTGAGCCACTTT +
Preference number: 4 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLYKLSP*LSLSHF
Trigger: AAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTA...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCAAACGAAGGTGTGGATaGCATATTATAGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRKRRCG*HIIEVK
Trigger: CTTAACTTCTATAATATGCCATCCACACCTTCGTTT...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTACATTGACAAGAACTaGATTGAGAGATGCATTGTT +
Preference number: 4 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRYIDKN*IERCIV
Trigger: AACAATGCATCTCTCAATCCAGTTCTTGTCAATGTA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCATGCAAACAGGGGTTaGAGTTGCAGACATTTAACT +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVHANRG*SCRHLT
Trigger: AGTTAAATGTCTGCAACTCCAACCCCTGTTTGCATG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCATGCAAACAGGGGTTaGAGTTGCAGACATTTAACT +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMHANRG*SCRHLT
Trigger: AGTTAAATGTCTGCAACTCCAACCCCTGTTTGCATG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAACATCACAGAGGCACTaGAATTTGTTGAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTTSQRH*NLLSKS
Trigger: GGACTTACTCAACAAATTCCAGTGCCTCTGTGATGT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATTATACATCCCATCGCTaGTATACAACAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHYTSHR*YTTITL
Trigger: CAAAGTTATTGTTGTATACCAGCGATGGGATGTATA...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
3UTR CAA 72 bp AGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTaGACAATAGTTGGATTACTCAAAATTAATGACAAG +
Preference number: 4 (lower is better)
Translates to: RKCDVQPGSNPP*TIVGLLKINDK
Trigger: CTTGTCATTAATTTTGAGTAATCCAACTATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGTACTATTGCATTCATTaGGGTCGATCTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQYYCIH*GRSHTG
Trigger: CCCAGTGTGAGATCGACCTCAATGAATGCAATAGTA...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGGAACAGAAGCACCTTTaGCTGATTATTGACCTGAAT +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMEQKHL*LIIDLN
Trigger: ATTCAGGTCAATAATCAGTCAAAGGTGCTTCTGTTC...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCGAACAGAAGCACCTTTaGCTGATTATTGACCTGAAT +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVEQKHL*LIIDLN
Trigger: ATTCAGGTCAATAATCAGTCAAAGGTGCTTCTGTTC...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGTGGTGTTGTGGGAAATaGACAGAAGCACCTTTGACT +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLWCCGK*TEAPLT
Trigger: AGTCAAAGGTGCTTCTGTTCATTTCCCACAACACCA...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGTGTGCCATCATTCACTaGCTGCAAACTTGTCAGACT +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQCAIIH*LQTCQT
Trigger: AGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACA...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR TCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAACGTATATTTACAAAATaGCATTTGGCAGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTERIFTK*HLAGHC
Trigger: ACAATGGCCTGCCAAATGTCATTTTGTAAATATACG...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAAGTTCAGCCTTGGATGTaGAGAAAATGGATGAGTAAG +
Preference number: 4 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIEVQPWM*RKWMSK
Trigger: CTTACTCATCCATTTTCTTCACATCCAAGGCTGAAC...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACTTGGAAGTGAGGGATaGATGTTCCATTATTTAGAC +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTLGSEG*MFHYLD
Trigger: GTCTAAATAATGGAACATGCATCCCTCACTTCCAAG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGAACTGGATTGAGAGATaGATTGTTTGTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: ERVSVIATKATEDFILWKNWIER*IVCWIW
Trigger: CCAAATCCAACAAACAATGCATCTCTCAATCCAGTT...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCTGTTGAGGGTAATCTaGTCTGTCTGCAAAATTTTC +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMLLRVI*SVCKIF
Trigger: GAAAATTTTGCAGACAGAGCAGATTACCCTCAACAG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCAGTGTAATCCCAGTTaGAGATTAACATTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMQCNPS*RLTLSG
Trigger: ACCTGACAATGTTAATCTGCAACTGGGATTACACTG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCATTTTAATTCAGTCTaGAACTCTGTGCAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVHFNSV*NSVQLP
Trigger: AGGCAACTGCACAGAGTTCCAGACTGAATTAAAATG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAAACATCACAGAGGCACTaGAATTTGTTGAGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIETSQRH*NLLSKS
Trigger: GGACTTACTCAACAAATTCCAGTGCCTCTGTGATGT...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACCATTTAAACAAGGCTaGGACCAACATTCGTCAATT +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTPFKQG*DQHSSI
Trigger: AATTGACGAATGTTGGTCCCAGCCTTGTTTAAATGG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTATGTAGATAAGCAGTaGGAAACTGAGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMYVDKQ*ETEVED
Trigger: ATCTTCTACCTCAGTTTCTCACTGCTTATCTACATA...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATATGTAGATAAGCAGTaGGAAACTGAGGTAGAAGAT +
Preference number: 4 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTYVDKQ*ETEVED
Trigger: ATCTTCTACCTCAGTTTCTCACTGCTTATCTACATA...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCTGAAAAGCACATATTaGTTGATCACTTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVLKSTY*LITFKW
Trigger: CCACTTGAAAGTGATCAATCAATATGTGCTTTTCAG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGCTGAAAAGCACATATTaGTTGATCACTTTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMLKSTY*LITFKW
Trigger: CCACTTGAAAGTGATCAATCAATATGTGCTTTTCAG...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTCATGTAGCATTATTGTaGCAAGGTTTTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIIHVALL*QGFDQQ
Trigger: TTGTTGGTCAAAACCTTGTCACAATAATGCTACATG...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR GCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAAGTAAGAGAGATAAATaGCTCCGATTTCTATTGTAC +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTESKRDK*LRFLLY
Trigger: GTACAATAGAAATCGGAGGCATTTATCTCTCTTACT...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR GCA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAATCTCAGTTAATAAGTTaGAGAACCAAAATTGGTGCA +
Preference number: 4 (lower is better)
Translates to: FHAHIDLECLYHKEPTTESQLIS*RTKIGA
Trigger: TGCACCAATTTTGGTTCTGCAACTTATTAACTGAGA...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CCA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTAAACGAAGGTGTGGATaGCATATTATAGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPKRRCG*HIIEVK
Trigger: CTTAACTTCTATAATATGCCATCCACACCTTCGTTT...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR TCA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAAGATACCAAGCATAGCTaGGACATTTTGTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIEDTKHS*DILFSF
Trigger: AAAGGAAAACAAAATGTCTCAGCTATGCTTGGTATC...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGTATGTCAGAGATACCTaGAGTACAGTCATCACATTC +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQYVRDT*STVITF
Trigger: GAATGTGATGACTGTACTTCAGGTATCTCTGACATA...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAAGTAAGAGAGATAAATaGCTCCGATTTCTATTGTAC +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVSKRDK*LRFLLY
Trigger: GTACAATAGAAATCGGAGGCATTTATCTCTCTTACT...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR GCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTCAAAATGCAGTTTGTaGTTCTTAGCATCACTTACA +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMSKCSL*FLASLT
Trigger: TGTAAGTGATGCTAAGAAGCACAAACTGCATTTTGA...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAAATTTGAGAGGCACCTaGTGTTGTTTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTNLRGT*CCFYCK
Trigger: TTTGCAATAAAAACAACACCAGGTGCCTCTCAAATT...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTAAACGAAGGTGTGGATaGCATATTATAGAAGTTAAG +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIIKRRCG*HIIEVK
Trigger: CTTAACTTCTATAATATGCCATCCACACCTTCGTTT...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATCAATTTTAATGTCTTaGAGACAGCCTACAAACGAA +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTSILMS*RQPTNE
Trigger: TTCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTATTTTACTACTAATTTaGGAGAGTTTGGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIIILLLI*ESLESA
Trigger: TGCTGACTCCAAACTCTCCCAAATTAGTAGTAAAAT...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGATTTTACTACTAATTTaGGAGAGTTTGGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMILLLI*ESLESA
Trigger: TGCTGACTCCAAACTCTCCCAAATTAGTAGTAAAAT...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTTACATTGACAAGAACTaGATTGAGAGATGCATTGTT +
Preference number: 4 (lower is better)
Translates to: EPIVVKMSEIKSSANLIIYIDKN*IERCIV
Trigger: AACAATGCATCTCTCAATCCAGTTCTTGTCAATGTA...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CCA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATATACATCCCATCGCTaGTATACAACAATAACTTTG +
Preference number: 4 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTYTSHR*YTTITL
Trigger: CAAAGTTATTGTTGTATACCAGCGATGGGATGTATA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAAAATATTCAGGACAATaGAACTACTCAGGAATGAAG +
Preference number: 4 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVKYSGQ*NYSGMK
Trigger: CTTCATTCCTGAGTAGTTCCATTGTCCTGAATATTT...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS-3UTR TCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCATGTAGCATTATTGTaGCAAGGTTTTGACCAACAA +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQHVALL*QGFDQQ
Trigger: TTGTTGGTCAAAACCTTGTCACAATAATGCTACATG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGAACTGGATTGAGAGATaGATTGTTTGTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQNWIER*IVCWIW
Trigger: CCAAATCCAACAAACAATGCATCTCTCAATCCAGTT...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGAATATAATAAAACAATaGTGTCGAGCGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLNIIKQ*CRAEPL
Trigger: CAGTGGTTCCGCTCGACACCATTGTTTTATTATATT...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR GCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGGACTTAGATTCAAAATaGAGTTTGTGCTTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLDLDSK*SLCFLA
Trigger: TGCTAAGAAGCACAAACTGCATTTTGAATCTAAGTC...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGAATTTGAGAGGCACCTaGTGTTGTTTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLNLRGT*CCFYCK
Trigger: TTTGCAATAAAAACAACACCAGGTGCCTCTCAAATT...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CCA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGTCAATTTTAATGTCTTaGAGACAGCCTACAAACGAA +
Preference number: 4 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQSILMS*RQPTNE
Trigger: TTCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGA...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GTGGCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGCACACGGCCCCATTTaGGCAAGGGCTGGAAGCACA +
Preference number: 5 (lower is better)
Translates to: VASSSTFPLGSPPSPDGWAHGPI*ARAGST
Trigger: TGTGCTTCCAGCCCTTGCCAAAATGGGGCCGTGTGC...CCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp AGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCTGTAGGGTTGTCCACTTCCATTaGCCACCTGGAGGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SSTFPLGSPPSPDGWGCRVVHFH*PPGGLG
Trigger: TCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAAC...CCTACAGCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp GCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCAGTTTGGAGTCAGCATaGCTAGTCTGCCGCGCTCTA +
Preference number: 5 (lower is better)
Translates to: ASSSTFPLGSPPSPDGWGSLESA*LVCRAL
Trigger: TAGAGCGCGGCAGACTAGCAATGCTGACTCCAAACT...GCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS GCA 90 bp TCCCTGTCTGTCTCAGAGAGGAGCGGGTGCCTCAGAACCCCCAGGTaGCATCTCTGTCCCACCCTACTTACAGCTCCTTCACAGAAAATA +
Preference number: 5 (lower is better)
Translates to: SLSVSERSGCLRTPR*HLCPTLLTAPSQKI
Trigger: TATTTTCTGTGAAGGAGCTGTAAGTAGGGTGGGACAGAGATGGCACCTGGGGGTTCTGAGGCACCCGCTCCTCTCTGAGACAGACAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000535699.5
ENST00000538660.5
CDS GCA 90 bp GGTCCTCTGGATCCCAACTCAGTGAGTGCCCTTCCCACATTGGTCTaGCTCTTGCAGCTGTTGTCTCCAGCACAGCCTTGGGTTACATTG +
Preference number: 5 (lower is better)
Translates to: GPLDPNSVSALPTLV*LLQLLSPAQPWVTL
Trigger: CAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGCAAGAGGCAGACCAATGTGGGAAGGGCACTCACTGAGTTGGGATCCAGAGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS-3UTR CAA 90 bp AGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCTGTAGGTGCAGGCCCTTTATATaGTCAATAGCTCTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SSTFPLGSPPSPDGWGCRCRPFI*SIALSP
Trigger: GGGAGACAGAGCTATTGACAATATAAAGGGCCTGCA...CCTACAGCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS CCA 90 bp CCACTTCCATTTGCCACCTGGAGGTCTGGGACAGTGGGTCTGTCATaGAAAGGGTCACTTCGTGCCATGTGCCATCATTCACTGACTGCA +
Preference number: 5 (lower is better)
Translates to: PLPFATWRSGTVGLS*KGSLRAMCHHSLTA
Trigger: TGCAGTCAGTGAATGATGGCACATGGCACGAAGTGACCCTTTCCATGACAGACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 90 bp CGATTTCACACAGGGACCCGGTGTAGCCAGATGGACATAGGCAGCTaGATCCATGCTGGCCATCTTGGAAGTGAGGGATGCATGTTCCAT +
Preference number: 5 (lower is better)
Translates to: RFHTGTRCSQMDIGS*IHAGHLGSEGCMFH
Trigger: ATGGAACATGCATCCCTCACTTCCAAGATGGCCAGCATGGATTCAGCTGCCTATGTCCATCTGGCTACACCGGGTCCCTGTGTGAAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 90 bp AGTGCCATGGTCTTATTTAGAGAACATCCTCTGGTGTGTTGCTGGTaGTCTGGTCCCAGTCCGGCTCCTGATCCCTGTCTGTCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: SAMVLFREHPLVCCW*SGPSPAPDPCLSQR
Trigger: TCTCTGAGACAGACAGGGATCAGGAGCCGGACTGGGACCAGACCACCAGCAACACACCAGAGGATGTTCTCTAAATAAGACCATGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS GCA 90 bp CTGGAGGTCTGGGACAGTGGGTCTGTCATGGAAAGGGTCACTTCGTaGCATGTGCCATCATTCACTGACTGCAAACTTGTCAGACTTAGC +
Preference number: 5 (lower is better)
Translates to: LEVWDSGSVMERVTS*HVPSFTDCKLVRLS
Trigger: GCTAAGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACATGGCACGAAGTGACCCTTTCCATGACAGACCCACTGTCCCAGACCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 90 bp GCAATTGTGCTGGTCACAAAAGGTGTTTCGTTGTCCACTTCCATTTaGCACCTGGAGGTCTGGGACAGTGGGTCTGTCATGGAAAGGGTC +
Preference number: 5 (lower is better)
Translates to: AIVLVTKGVSLSTSI*HLEVWDSGSVMERV
Trigger: GACCCTTTCCATGACAGACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAACGAAACACCTTTTGTGACCAGCACAATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 90 bp TGTTTCGTTGTCCACTTCCATTTGCCACCTGGAGGTCTGGGACAGTaGGTCTGTCATGGAAAGGGTCACTTCGTGCCATGTGCCATCATT +
Preference number: 5 (lower is better)
Translates to: CFVVHFHLPPGGLGQ*VCHGKGHFVPCAII
Trigger: AATGATGGCACATGGCACGAAGTGACCCTTTCCATGACAGACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAACGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 90 bp ACAAAAGGTGTTTCGTTGTCCACTTCCATTTGCCACCTGGAGGTCTaGGACAGTGGGTCTGTCATGGAAAGGGTCACTTCGTGCCATGTG +
Preference number: 5 (lower is better)
Translates to: TKGVSLSTSICHLEV*DSGSVMERVTSCHV
Trigger: CACATGGCACGAAGTGACCCTTTCCATGACAGACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAACGAAACACCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 90 bp TGCTGGTCACAAAAGGTGTTTCGTTGTCCACTTCCATTTGCCACCTaGAGGTCTGGGACAGTGGGTCTGTCATGGAAAGGGTCACTTCGT +
Preference number: 5 (lower is better)
Translates to: CWSQKVFRCPLPFAT*RSGTVGLSWKGSLR
Trigger: ACGAAGTGACCCTTTCCATGACAGACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAACGAAACACCTTTTGTGACCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 90 bp TTAAGTGCCATGGTCTTATTTAGAGAACATCCTCTGGTGTGTTGCTaGTGGTCTGGTCCCAGTCCGGCTCCTGATCCCTGTCTGTCTCAG +
Preference number: 5 (lower is better)
Translates to: LSAMVLFREHPLVCC*WSGPSPAPDPCLSQ
Trigger: CTGAGACAGACAGGGATCAGGAGCCGGACTGGGACCAGACCACCAGCAACACACCAGAGGATGTTCTCTAAATAAGACCATGGCACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS-3UTR CAA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCAGATCTGAGCAAAACTaGACAACCCTCAGGAGCCTG +
Preference number: 5 (lower is better)
Translates to: WAMPTPVSMLKSISVVATRSEQN*TTLRSL
Trigger: CAGGCTCCTGAGGGTTGTCAAGTTTTGCTCAGATCT...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGCACAATCTTGGCTCATaGCAACGGCCGCCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMHNLGS*QRPPPG
Trigger: CCCAGGAGGCGGCCGTTGCAATGAGCCAAGATTGTG...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS TCA 90 bp GCTGAAAGAAGAAGGCAGTCCAGTGATGCGTCCATATTGTTTCTCTaGGGACAGCTCCACACATTCCCCATTGGACTGGCAGGGGTTACT +
Preference number: 5 (lower is better)
Translates to: AERRRQSSDASILFL*GQLHTFPIGLAGVT
Trigger: AGTAACCCCTGCCAGTCCAATGGGGAATGTGTGGAGCTGTCCTCAGAGAAACAATATGGACGCATCACTGGACTGCCTTCTTCTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS TCA 90 bp GGGCTATGTTACAAACTGAGCCCTTGGTTGTCACTGAGCCACTTTTaGCCCACAGGAAGCCATCGCCCTCAAATGAAAGTGTGGTTGCGA +
Preference number: 5 (lower is better)
Translates to: GLCYKLSPWLSLSHF*PTGSHRPQMKVWLR
Trigger: TCGCAACCACACTTTCATTTGAGGGCGATGGCTTCCTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAACATAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 90 bp CTTGGCCTCACCTGTGAATCCAGGCTGACAGATACAGACATAACCTaGGGCTTCATGGTAGCTGAAAGAAGAAGGCAGTCCAGTGATGCG +
Preference number: 5 (lower is better)
Translates to: LGLTCESRLTDTDIT*GFMVAERRRQSSDA
Trigger: CGCATCACTGGACTGCCTTCTTCTTTCAGCTACCATGAAGCCTCAGGTTATGTCTGTATCTGTCAGCCTGGATTCACAGGTGAGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475659.1
CDS CCA 90 bp TTGAGGGTAATCTGCTCTGTCTGCAAAATTTTCCTCTCAGACAGTTaGGGCCTTCATAGGGCCTGTGGCAGTCACACTGGTAACTCAGCC +
Preference number: 5 (lower is better)
Translates to: LRVICSVCKIFLSDS*GLHRACGSHTGNSA
Trigger: GGCTGAGTTACCAGTGTGACTGCCACAGGCCCTATGAAGGCCCCAACTGTCTGAGAGGAAAATTTTGCAGACAGAGCAGATTACCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538660.5
CDS-3UTR CAA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCGCACACGGCCCCATTTaGGCAAGGGCTGGAAGCACA +
Preference number: 5 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRAHGPI*ARAGST
Trigger: TGTGCTTCCAGCCCTTGCCAAAATGGGGCCGTGTGC...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACGTCGCAGTGTCTGCCTaGATATCCTGGGACACAGAA +
Preference number: 5 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHVAVSA*ISWDTE
Trigger: TTCTGTGTCCCAGGATATCAAGGCAGACACTGCGAC...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTCCATGCTGGCCATCTaGGAAGTGAGGGATGCATGT +
Preference number: 5 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHSMLAI*EVRDAC
Trigger: ACATGCATCCCTCACTTCCAAGATGGCCAGCATGGA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATAGTTGTCCACTTCCATTaGCCACCTGGAGGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTIVVHFH*PPGGLG
Trigger: TCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAAC...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGTGCAGTGGCACAATCTaGGCTCATTGCAACGGCCGC +
Preference number: 5 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMCSGTI*AHCNGR
Trigger: GCGGCCGTTGCAATGAGCCAAGATTGTGCCACTGCA...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GCATCAAGTTCCACATTTCCACTCGGGAGCCCTCCTTCTCCTGACGGCTGGGGCAGTTGCAGATTAACATaGTCAGGTATGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: ASSSTFPLGSPPSPDGWGSCRLT*SGMSEI
Trigger: TATCTCTGACATACCTGACAATGTTAATCTGCAACT...GCCCCAGCCGTCAGGAGAAGGAGGGCTCCCGAGTGGAAATGTGGAACTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTGCCTCTTGCAGCTGTaGTCTCCAGCACAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLCLLQL*SPAQPW
Trigger: CCAAGGCTGTGCTGGAGACAACAGCTGCAAGAGGCA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS CCA 90 bp AGCACATTCATCCACTTCCAAGTCGCAGTGTCTGCCTTGATATCCTaGGACACAGAAGCAGGAGTAACCATCAATTCCATCCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: STFIHFQVAVSALIS*DTEAGVTINSILAH
Trigger: GTGTGCCAGGATGGAATTGATGGTTACTCCTGCTTCTGTGTCCCAGGATATCAAGGCAGACACTGCGACTTGGAAGTGGATGAATGTGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTTCCATGCTGGCCATCTaGGAAGTGAGGGATGCATGT +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNASMLAI*EVRDAC
Trigger: ACATGCATCCCTCACTTCCAAGATGGCCAGCATGGA...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTCTCCATCGCTGGTGTaGTGGGAAATGAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHSPSLV*WEMNRS
Trigger: GCTTCTGTTCATTTCCCACAACACCAGCGATGGAGA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCTCTGCTTTGACAAGGTaGGCTTTCACACCAATCCTT +
Preference number: 5 (lower is better)
Translates to: WAMPTPVSMLKSISVVATSALTR*AFTPIL
Trigger: AAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGA...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAGTTCAGTCTCTTGCTaGTCAGGTAGGCCACCAATG +
Preference number: 5 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHSSVSC*SGRPPM
Trigger: CATTGGTGGCCTACCTGACAAGCAAGAGACTGAACT...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGTTGTCCACTTCCATTaGCCACCTGGAGGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLVVHFH*PPGGLG
Trigger: TCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAAC...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS TCA 90 bp AGAAAGCTCCTTTCTCCTGGGGTGTTCACACAAGTGGCACTTCCTTaGCAGGGATTGGAGAAGCAAGGGTCTTTCATGTTGTCACAGTCT +
Preference number: 5 (lower is better)
Translates to: RKLLSPGVFTQVALP*QGLEKQGSFMLSQS
Trigger: AGACTGTGACAACATGAAAGACCCTTGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCCCAGGAGAAAGGAGCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS TCA 90 bp TGCTTCGGAAAAGTAGAAGAGCCATTGGCTGAACAGTCTGAAACCTaGGGGCTATGTTACAAACTGAGCCCTTGGTTGTCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: CFGKVEEPLAEQSET*GLCYKLSPWLSLSH
Trigger: GTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAACATAGCCCTCAGGTTTCAGACTGTTCAGCCAATGGCTCTTCTACTTTTCCGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 90 bp GAAGGTGTTTCCAGTTGCCCAAGATCCTACACAGAAGCGAAACAGTaGAACTTGGTACTTAGGTCCTCTGGATCCCAACTCAGTGAGTGC +
Preference number: 5 (lower is better)
Translates to: EGVSSCPRSYTEAKQ*NLVLRSSGSQLSEC
Trigger: GCACTCACTGAGTTGGGATCCAGAGGACCTAAGTACCAAGTTTCACTGTTTCGCTTCTGTGTAGGATCTTGGGCAACTGGAAACACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS GCA 90 bp TGCAGGGATCTGAAGCACATTCATCCACTTCCAAGTCGCAGTGTCTaGCTTGATATCCTGGGACACAGAAGCAGGAGTAACCATCAATTC +
Preference number: 5 (lower is better)
Translates to: CRDLKHIHPLPSRSV*LDILGHRSRSNHQF
Trigger: GAATTGATGGTTACTCCTGCTTCTGTGTCCCAGGATATCAAGGCAGACACTGCGACTTGGAAGTGGATGAATGTGCTTCAGATCCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CCA 90 bp GACATTTGCACAGAAAGCTCCTTTCTCCTGGGGTGTTCACACAAGTaGCACTTCCTTGACAGGGATTGGAGAAGCAAGGGTCTTTCATGT +
Preference number: 5 (lower is better)
Translates to: DICTESSFLLGCSHK*HFLDRDWRSKGLSC
Trigger: ACATGAAAGACCCTTGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCCCAGGAGAAAGGAGCTTTCTGTGCAAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTACCCAGGAGGACATTaGCACAGAAAGCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHYPGGH*HRKLLS
Trigger: AGAAAGGAGCTTTCTGTGCAAATGTCCTCCTGGGTA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTTGTTGGCAGGAGTTCTaGCCACAGGAACCAATGGTA +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNACWQEF*PQEPMV
Trigger: TACCATTGGTTCCTGTGGCAAGAACTCCTGCCAACA...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGGCACACGGCCCCATTTaGGCAAGGGCTGGAAGCACA +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKAHGPI*ARAGST
Trigger: TGTGCTTCCAGCCCTTGCCAAAATGGGGCCGTGTGC...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCGTCGCAGTGTCTGCCTaGATATCCTGGGACACAGAA +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIVAVSA*ISWDTE
Trigger: TTCTGTGTCCCAGGATATCAAGGCAGACACTGCGAC...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGTCGCAGTGTCTGCCTaGATATCCTGGGACACAGAA +
Preference number: 5 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNVAVSA*ISWDTE
Trigger: TTCTGTGTCCCAGGATATCAAGGCAGACACTGCGAC...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGCATGTAGCCTCGTTCTaGCAGGGATCTGAAGCACAT +
Preference number: 5 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGHVASF*QGSEAH
Trigger: ATGTGCTTCAGATCCCTGCAAGAACGAGGCTACATG...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAATCCATGCTGGCCATCTaGGAAGTGAGGGATGCATGT +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLESMLAI*EVRDAC
Trigger: ACATGCATCCCTCACTTCCAAGATGGCCAGCATGGA...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTTTACAAACTGAGCCCTaGGTTGTCACTGAGCCACTT +
Preference number: 5 (lower is better)
Translates to: SHHIHSVWIPISKGHNAPLQTEP*VVTEPL
Trigger: AAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAA...AGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAAGCAGAGCAACACCATaGCTGGTCATTCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLESRATP*LVIPTG
Trigger: ACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGCT...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGCAGCGTCCTCTGCTTaGACAAGGTTGGCTTTCACA +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLAASSA*TRLAFT
Trigger: TGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGC...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCGCAGCGTCCTCTGCTTaGACAAGGTTGGCTTTCACA +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIAASSA*TRLAFT
Trigger: TGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGC...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGAGTTTGGAGTCAGCATaGCTAGTCTGCCGCGCTCTA +
Preference number: 5 (lower is better)
Translates to: LETKRKVGHAYTSVNAQESLESA*LVCRAL
Trigger: TAGAGCGCGGCAGACTAGCAATGCTGACTCCAAACT...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGCAGGACAAAAGGTGTTTCGTaGTCCACTTCCATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: GSPSRRDTMLLNQSLHCRTKGVS*STSICH
Trigger: GTGGCAAATGGAAGTGGACAACGAAACACCTTTTGT...CCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTACTCTGTCAGAGCAGTaGCCATGGATACAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNATLSEQ*PWIQGF
Trigger: AAACCCCTGTATCCATGGCAACTGCTCTGACAGAGT...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTAAATCAGTCTCTCCATaGCAGGGGGTGGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAKSVSP*QGVASS
Trigger: ACTTGATGCCACCCCCTGCAATGGAGAGACTGATTT...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACAGAGAGAGGCTGTATTTaGCCATCTGGAGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTERGCI*PSGVCR
Trigger: CCTGCAGACTCCAGATGGCAAAATACAGCCTCTCTC...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS TCA 90 bp AGCAGTTGCCATGGATACAGGGGTTTGAAAAGCATTCATCGATGTTaGGTTCACAGTGTTTCCCTGACCATCCCAAGGGACAGGAGCAAT +
Preference number: 5 (lower is better)
Translates to: SSCHGYRGLKSIHRC*VHSVSLTIPRDRSN
Trigger: ATTGCTCCTGTCCCTTGGGATGGTCAGGGAAACACTGTGAACTCAACATCGATGAATGCTTTTCAAACCCCTGTATCCATGGCAACTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 90 bp GAATGTAGCCACTTAGCAGCTCCAGCTTCACAAACACATCCCTGTTaGTTCGGAAAAGTAGAAGAGCCATTGGCTGAACAGTCTGAAACC +
Preference number: 5 (lower is better)
Translates to: ECSHLAAPASQTHPC*FGKVEEPLAEQSET
Trigger: GGTTTCAGACTGTTCAGCCAATGGCTCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTGTGAAGCTGGAGCTGCTAAGTGGCTACATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 90 bp ATTAAGGTAAGGGTCACAGCCTCTGCAAATATTACCTCCACGAAATaGCACTCTCCATCGCTGGTGTTGTGGGAAATGAACAGAAGCACC +
Preference number: 5 (lower is better)
Translates to: IKVRVTASANITSTK*HSPSLVLWEMNRST
Trigger: GGTGCTTCTGTTCATTTCCCACAACACCAGCGATGGAGAGTGGCATTTCGTGGAGGTAATATTTGCAGAGGCTGTGACCCTTACCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCACAAGTGGCACTTCCTaGACAGGGATTGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLTSGTS*TGIGEA
Trigger: TGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATACAAGTGGCACTTCCTaGACAGGGATTGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNTSGTS*TGIGEA
Trigger: TGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGGCACACGGCCCCATTTaGGCAAGGGCTGGAAGCACA +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMAHGPI*ARAGST
Trigger: TGTGCTTCCAGCCCTTGCCAAAATGGGGCCGTGTGC...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCCATTCCATGCTGGCCATCTaGGAAGTGAGGGATGCATGT +
Preference number: 5 (lower is better)
Translates to: FPVFSAGHRLPEAIDQLHSMLAI*EVRDAC
Trigger: ACATGCATCCCTCACTTCCAAGATGGCCAGCATGGA...ATGGAGTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTCCATGCTGGCCATCTaGGAAGTGAGGGATGCATGT +
Preference number: 5 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRSMLAI*EVRDAC
Trigger: ACATGCATCCCTCACTTCCAAGATGGCCAGCATGGA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATACAAATGAAAGTGTGGTaGCGATTTCACACAGGGACC +
Preference number: 5 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTIQMKVW*RFHTGT
Trigger: GGTCCCTGTGTGAAATCGCAACCACACTTTCATTTG...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTTCTCCATCGCTGGTGTaGTGGGAAATGAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: YVTNTLLRPWDRTATKAASPSLV*WEMNRS
Trigger: GCTTCTGTTCATTTCCCACAACACCAGCGATGGAGA...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAATCTCCATCGCTGGTGTaGTGGGAAATGAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLESPSLV*WEMNRS
Trigger: GCTTCTGTTCATTTCCCACAACACCAGCGATGGAGA...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCAGCAGAGCAACACCATaGCTGGTCATTCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRSRATP*LVIPTG
Trigger: ACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGCT...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTGCAGCGTCCTCTGCTTaGACAAGGTTGGCTTTCACA +
Preference number: 5 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPAASSA*TRLAFT
Trigger: TGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGC...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATAGTTCAGTCTCTTGCTaGTCAGGTAGGCCACCAATG +
Preference number: 5 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNSSVSC*SGRPPM
Trigger: CATTGGTGGCCTACCTGACAAGCAAGAGACTGAACT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGCATTAGTGTGGTTGCCACCTCTTGGATACAGCCTTaGAAGAATCCACCATTAAGT +
Preference number: 5 (lower is better)
Translates to: WAMPTPVSMLKSISVVATSWIQP*KNPPLS
Trigger: ACTTAATGGTGGATTCTTCAAAGGCTGTATCCAAGA...GGTGGCAACCACACTAATGCTCTTGAGCATTGACACTGGTGTAGGCATGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATCAGCCTTGGGTTACATaGACAAGAACTGGATTGAGA +
Preference number: 5 (lower is better)
Translates to: VCGSPSRRDTMLLNQSLHQPWVT*TRTGLR
Trigger: TCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTG...ATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGAATACATTCAAATCCTaGAAGCACCGGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGNTFKS*KHRLAL
Trigger: CAGTGCCAGCCGGTGCTTCAAGGATTTGAATGTATT...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGACTCTGTCAGAGCAGTaGCCATGGATACAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: KRISNKATVTEPIVVKMSTLSEQ*PWIQGF
Trigger: AAACCCCTGTATCCATGGCAACTGCTCTGACAGAGT...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTCATTCCCACAGACTGTaGAGGGTAATCTGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: YVTNTLLRPWDRTATKAAHSHRL*RVICSV
Trigger: GACAGAGCAGATTACCCTCAACAGTCTGTGGGAATG...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCATTCCCACAGACTGTaGAGGGTAATCTGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIHSHRL*RVICSV
Trigger: GACAGAGCAGATTACCCTCAACAGTCTGTGGGAATG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGCATTCCCACAGACTGTaGAGGGTAATCTGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: KRISNKATVTEPIVVKMSHSHRL*RVICSV
Trigger: GACAGAGCAGATTACCCTCAACAGTCTGTGGGAATG...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp ATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAATCAGTCTCTCCATaGCAGGGGGTGGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: ISNKATVTEPIVVKMSEIKSVSP*QGVASS
Trigger: ACTTGATGCCACCCCCTGCAATGGAGAGACTGATTT...GATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAAAATCAGTCTCTCCATaGCAGGGGGTGGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEKSVSP*QGVASS
Trigger: ACTTGATGCCACCCCCTGCAATGGAGAGACTGATTT...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS TCA 90 bp TCTTCCTATTTCATTGAGGCATGTAGCCTCGTTCTTGCAGGGATCTaGAGCACATTCATCCACTTCCAAGTCGCAGTGTCTGCCTTGATA +
Preference number: 5 (lower is better)
Translates to: SSYFIEACSLVLAGI*STFIHFQVAVSALI
Trigger: TATCAAGGCAGACACTGCGACTTGGAAGTGGATGAATGTGCTTCAGATCCCTGCAAGAACGAGGCTACATGCCTCAATGAAATAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS TCA 90 bp AATACCAGAAAGTCAAGTCATATCCCATCTCCTTGGCCTCACCTGTaGATCCAGGCTGACAGATACAGACATAACCTGAGGCTTCATGGT +
Preference number: 5 (lower is better)
Translates to: NTRKSSHIPSPWPHL*IQADRYRHNLRLHG
Trigger: ACCATGAAGCCTCAGGTTATGTCTGTATCTGTCAGCCTGGATTCACAGGTGAGGCCAAGGAGATGGGATATGACTTGACTTTCTGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475659.1
CDS GCA 90 bp TCTGGGACAGTGGGTCTGTCATGGAAAGGGTCACTTCGTGCCATGTaGCATCATTCACTGACTGCAAACTTGTCAGACTTAGCATATAAA +
Preference number: 5 (lower is better)
Translates to: SGTVGLSWKGSLRAM*HHSLTANLSDLAYK
Trigger: TTTATATGCTAAGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACATGGCACGAAGTGACCCTTTCCATGACAGACCCACTGTCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS-3UTR CAA 90 bp AGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCACAAGGGTCTTTCATGTaGTCACAGTCTTTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: SVWIPISKGHNAPKSVSPQGSFM*SQSLSK
Trigger: TTTGGACAAAGACTGTGACAACATGAAAGACCCTTG...TGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCCACACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATACAAGTGGCACTTCCTaGACAGGGATTGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHTSGTS*TGIGEA
Trigger: TGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGTACCCAGGAGGACATTaGCACAGAAAGCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKYPGGH*HRKLLS
Trigger: AGAAAGGAGCTTTCTGTGCAAATGTCCTCCTGGGTA...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGTACCCAGGAGGACATTaGCACAGAAAGCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: LLEVTTEATMASKRISNKYPGGH*HRKLLS
Trigger: AGAAAGGAGCTTTCTGTGCAAATGTCCTCCTGGGTA...CTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTACCCAGGAGGACATTaGCACAGAAAGCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLYPGGH*HRKLLS
Trigger: AGAAAGGAGCTTTCTGTGCAAATGTCCTCCTGGGTA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTTTGAAGAACATTCATaGACGTCTTCTTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHFEEHS*TSSSQW
Trigger: CCACTGCGAAGAAGACGTCAATGAATGTTCTTCAAA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAACAAATGAAAGTGTGGTaGCGATTTCACACAGGGACC +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEQMKVW*RFHTGT
Trigger: GGTCCCTGTGTGAAATCGCAACCACACTTTCATTTG...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGCAAATGAAAGTGTGGTaGCGATTTCACACAGGGACC +
Preference number: 5 (lower is better)
Translates to: SNKATVTEPIVVKMSEIKQMKVW*RFHTGT
Trigger: GGTCCCTGTGTGAAATCGCAACCACACTTTCATTTG...CTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCAAATGAAAGTGTGGTaGCGATTTCACACAGGGACC +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIQMKVW*RFHTGT
Trigger: GGTCCCTGTGTGAAATCGCAACCACACTTTCATTTG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGCAAATGAAAGTGTGGTaGCGATTTCACACAGGGACC +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKQMKVW*RFHTGT
Trigger: GGTCCCTGTGTGAAATCGCAACCACACTTTCATTTG...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCTAATTTGGGAGAGTTaGGAGTCAGCATTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNALIWES*ESALLV
Trigger: GACTAGCAATGCTGACTCCAAACTCTCCCAAATTAG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp GGATCCCCATCTCGAAGGGACACAATGCTCCTAAATCAGTCTCTCCATTGCAGGTCTTGGATACAGCCTTaGAAGAATCCACCATTAAGT +
Preference number: 5 (lower is better)
Translates to: GSPSRRDTMLLNQSLHCRSWIQP*KNPPLS
Trigger: ACTTAATGGTGGATTCTTCAAAGGCTGTATCCAAGA...CCTGCAATGGAGAGACTGATTTAGGAGCATTGTGTCCCTTCGAGATGGGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTCAGCCTTGGGTTACATaGACAAGAACTGGATTGAGA +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAQPWVT*TRTGLR
Trigger: TCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTG...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGCAGCCTTGGGTTACATaGACAAGAACTGGATTGAGA +
Preference number: 5 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGQPWVT*TRTGLR
Trigger: TCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTG...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGAATACATTCAAATCCTaGAAGCACCGGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: LETKRKVGHAYTSVNAQENTFKS*KHRLAL
Trigger: CAGTGCCAGCCGGTGCTTCAAGGATTTGAATGTATT...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp ATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAATACATTCAAATCCTaGAAGCACCGGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: ISNKATVTEPIVVKMSEINTFKS*KHRLAL
Trigger: CAGTGCCAGCCGGTGCTTCAAGGATTTGAATGTATT...GATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTGCAGGCCCTTTATATaGTCAATAGCTCTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPICRPFI*SIALSP
Trigger: GGGAGACAGAGCTATTGACAATATAAAGGGCCTGCA...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp GCTGTAGGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATTGCCTCCGATTTCTATaGTACTTAGACACCCTTGCA +
Preference number: 5 (lower is better)
Translates to: AVGSLSCPFVGGDNRSNNCLRFL*YLDTLA
Trigger: TGCAAGGGTGTCTAAGTACAATAGAAATCGGAGGCA...ATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACCTACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCAAATCAGTCTCTCCATaGCAGGGGGTGGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRKSVSP*QGVASS
Trigger: ACTTGATGCCACCCCCTGCAATGGAGAGACTGATTT...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGTCCAGAAGTGTGGGCTaGTTCTTCAATGTCACCTCT +
Preference number: 5 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMSRSVG*FFNVTS
Trigger: AGAGGTGACATTGAAGAACAAGCCCACACTTCTGGA...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTAGAAGAGCAGAGGCTTaGAAGGCAGCTCAACCTTAC +
Preference number: 5 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPRRAEA*KAAQPY
Trigger: GTAAGGTTGAGCTGCCTTCAAAGCCTCTGCTCTTCT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTGGAAGCAACCCACCCTaGACAATAGTTGGATTACTC +
Preference number: 5 (lower is better)
Translates to: YVTNTLLRPWDRTATKAAGSNPP*TIVGLL
Trigger: GAGTAATCCAACTATTGTCAAGGGTGGGTTGCTTCC...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAACAAGCATTCTCGGTCTaGGGTGGGCCAGAGTGTTCA +
Preference number: 5 (lower is better)
Translates to: FHAHIDLECLYHKEPTTEQAFSV*GGPECS
Trigger: TGAACACTCTGGCCCACCCAAGACCGAGAATGCTTG...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS TCA 90 bp GTTTTGACCAACAAAGAGGCATCAAGGTCTCACAGTGTGTCCCTGTaGATCCACTACCCGTGCAGTTACAGCTATATCTGTTTTCTCCAT +
Preference number: 5 (lower is better)
Translates to: VLTNKEASRSHSVSL*IHYPCSYSYICFLH
Trigger: ATGGAGAAAACAGATATAGCTGTAACTGCACGGGTAGTGGATTCACAGGGACACACTGTGAGACCTTGATGCCTCTTTGTTGGTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS GCA 90 bp GAGGCAAGAATAGCCATTAGTATGACTAATGCAGGTGGCTCCATTTaGACACTGGTGACTCTGGCAGTTGTCTATATCCACTTCACAGTT +
Preference number: 5 (lower is better)
Translates to: EARIAISMTNAGGSI*TLVTLAVVYIHFTV
Trigger: AACTGTGAAGTGGATATAGACAACTGCCAGAGTCACCAGTGTGCAAATGGAGCCACCTGCATTAGTCATACTAATGGCTATTCTTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTGAGAGGCACCTGGTGTaGTTTTTATTGCAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAERHLV*FLLQKE
Trigger: TTCCTTTTGCAATAAAAACAACACCAGGTGCCTCTC...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGTCGCAGTGTCTGCCTaGATATCCTGGGACACAGAA +
Preference number: 5 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPVAVSA*ISWDTE
Trigger: TTCTGTGTCCCAGGATATCAAGGCAGACACTGCGAC...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGTTTGAAGAACATTCATaGACGTCTTCTTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: IPEVQSSHSQCVDPHLEGFEEHS*TSSSQW
Trigger: CCACTGCGAAGAAGACGTCAATGAATGTTCTTCAAA...CCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGAGCAGAGCAACACCATaGCTGGTCATTCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKSRATP*LVIPTG
Trigger: ACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGCT...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCCTCACACAGCCTGCCTaGACATTTAATGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRLTQPA*TFNDEP
Trigger: TGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGAG...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGTCTGCTTTGACAAGGTaGGCTTTCACACCAATCCTT +
Preference number: 5 (lower is better)
Translates to: LLEVTTEATMASKRISNKSALTR*AFTPIL
Trigger: AAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGA...CTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATTCTGCTTTGACAAGGTaGGCTTTCACACCAATCCTT +
Preference number: 5 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNSALTR*AFTPIL
Trigger: AAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGA...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGAATTTTACTACTAATTaGGGAGAGTTTGGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: GSLSCPFVGGDNRSNNGQNFTTN*GEFGVS
Trigger: GCTGACTCCAAACTCTCCCAAATTAGTAGTAAAATT...CTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTCTTGGATACAGCCTTaGAAGAATCCACCATTAAGT +
Preference number: 5 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHSWIQP*KNPPLS
Trigger: ACTTAATGGTGGATTCTTCAAAGGCTGTATCCAAGA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTACAAAAGGTGTTTCGTaGTCCACTTCCATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: YVTNTLLRPWDRTATKAATKGVS*STSICH
Trigger: GTGGCAAATGGAAGTGGACAACGAAACACCTTTTGT...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCTGCCTCCGATTTCTATaGTACTTAGACACCCTTGCA +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLCLRFL*YLDTLA
Trigger: TGCAAGGGTGTCTAAGTACAATAGAAATCGGAGGCA...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGTGCCTCCGATTTCTATaGTACTTAGACACCCTTGCA +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKCLRFL*YLDTLA
Trigger: TGCAAGGGTGTCTAAGTACAATAGAAATCGGAGGCA...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATAAAGCATTCATCGATGTaGAGTTCACAGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTIKHSSM*SSQCFP
Trigger: AGGGAAACACTGTGAACTCAACATCGATGAATGCTT...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATACATGCACATATAGACTaGGAATGCCTGTACCACAAA +
Preference number: 5 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTIHAHID*ECLYHK
Trigger: TTTGTGGTACAGGCATTCCAAGTCTATATGTGCATG...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGAGCATCCTGACAAGTaGCACCATTTAAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKEHPDK*HHLNKA
Trigger: AGCCTTGTTTAAATGGTGCAACTTGTCAGGATGCTC...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCGAGCATCCTGACAAGTaGCACCATTTAAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIEHPDK*HHLNKA
Trigger: AGCCTTGTTTAAATGGTGCAACTTGTCAGGATGCTC...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACTATTGTGACAAGGTTTaGACCAACAAAGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: LKYSHHIHSVWIPISKGHYCDKV*TNKEAS
Trigger: TGATGCCTCTTTGTTGGTCAAAACCTTGTCACAATA...GTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS TCA 90 bp TTAATTCAGTCTGGAACTCTGTGCAGTTGCCTCCATTGTAGCAAGTaGGATTTGTCTTCTCATTCCCACAGACTGTTGAGGGTAATCTGC +
Preference number: 5 (lower is better)
Translates to: LIQSGTLCSCLHCSK*DLSSHSHRLLRVIC
Trigger: GCAGATTACCCTCAACAGTCTGTGGGAATGAGAAGACAAATCTCACTTGCTACAATGGAGGCAACTGCACAGAGTTCCAGACTGAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 90 bp GCAGCTGTTGTCTCCAGCACAGCCTTGGGTTACATTGACAAGAACTaGATTGAGAGATGCATTGTTTGTTGGATTTGGAAAGAATTCCAG +
Preference number: 5 (lower is better)
Translates to: AAVVSSTALGYIDKN*IERCIVCWIWKEFQ
Trigger: CTGGAATTCTTTCCAAATCCAACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 90 bp TTTTGGCAAGGGTTTGAAGAACATTCATTGACGTCTTCTTCGCAGTaGATTCATAGAGAAGAGACAGAGCAAGGTCAGCTATGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: FWQGFEEHSLTSSSQ*IHREETEQGQLCGD
Trigger: GTCACCACATAGCTGACCTTGCTCTGTCTCTTCTCTATGAATCCACTGCGAAGAAGACGTCAATGAATGTTCTTCAAACCCTTGCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476483.1
CDS-3UTR CAA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGAGGCACCTGGTGTaGTTTTTATTGCAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: KRISNKATVTEPIVVKMSERHLV*FLLQKE
Trigger: TTCCTTTTGCAATAAAAACAACACCAGGTGCCTCTC...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGAGAGGCACCTGGTGTaGTTTTTATTGCAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEERHLV*FLLQKE
Trigger: TTCCTTTTGCAATAAAAACAACACCAGGTGCCTCTC...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGCAAGGGTCTTTCATGTaGTCACAGTCTTTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKQGSFM*SQSLSK
Trigger: TTTGGACAAAGACTGTGACAACATGAAAGACCCTTG...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATCAAGGGTCTTTCATGTaGTCACAGTCTTTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNQGSFM*SQSLSK
Trigger: TTTGGACAAAGACTGTGACAACATGAAAGACCCTTG...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTCATGTAGCCTCGTTCTaGCAGGGATCTGAAGCACAT +
Preference number: 5 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPHVASF*QGSEAH
Trigger: ATGTGCTTCAGATCCCTGCAAGAACGAGGCTACATG...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGCATGTAGCCTCGTTCTaGCAGGGATCTGAAGCACAT +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKHVASF*QGSEAH
Trigger: ATGTGCTTCAGATCCCTGCAAGAACGAGGCTACATG...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATTTACTATTGCATTCATaGAGGTCGATCTCACACTGG +
Preference number: 5 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNLLLHS*RSISHW
Trigger: CCAGTGTGAGATCGACCTCAATGAATGCAATAGTAA...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTTTTGAAGAACATTCATaGACGTCTTCTTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQAFEEHS*TSSSQW
Trigger: CCACTGCGAAGAAGACGTCAATGAATGTTCTTCAAA...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TTAGAAACCAAGAGAAAAGTGGGCCATGCCTACACCAGTGTCAATGCTCAAGAGACAAACACATCCCTGTaGCTTCGGAAAAGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: LETKRKVGHAYTSVNAQETNTSL*LRKSRR
Trigger: TCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTGT...CTCTTGAGCATTGACACTGGTGTAGGCATGGCCCACTTTTCTCTTGGTTTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCACAAACACATCCCTGTaGCTTCGGAAAAGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPITNTSL*LRKSRR
Trigger: TCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTGT...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCACAAACACATCCCTGTaGCTTCGGAAAAGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLTNTSL*LRKSRR
Trigger: TCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTGT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCAGCAGAGCAACACCATaGCTGGTCATTCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVSRATP*LVIPTG
Trigger: ACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGCT...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAGCAGCGTCCTCTGCTTaGACAAGGTTGGCTTTCACA +
Preference number: 5 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVAASSA*TRLAFT
Trigger: TGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGC...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGGCAGCGTCCTCTGCTTaGACAAGGTTGGCTTTCACA +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMAASSA*TRLAFT
Trigger: TGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGC...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCAGTTTGGAGTCAGCATaGCTAGTCTGCCGCGCTCTA +
Preference number: 5 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVSLESA*LVCRAL
Trigger: TAGAGCGCGGCAGACTAGCAATGCTGACTCCAAACT...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTAATTTGGGAGAGTTaGGAGTCAGCATTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHLIWES*ESALLV
Trigger: GACTAGCAATGCTGACTCCAAACTCTCCCAAATTAG...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCCATCAGCCTTGGGTTACATaGACAAGAACTGGATTGAGA +
Preference number: 5 (lower is better)
Translates to: FPVFSAGHRLPEAIDQLHQPWVT*TRTGLR
Trigger: TCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTG...ATGGAGTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATACAAAAGGTGTTTCGTaGTCCACTTCCATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHTKGVS*STSICH
Trigger: GTGGCAAATGGAAGTGGACAACGAAACACCTTTTGT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATAAGCATTCATCGATGTaGAGTTCACAGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNKHSSM*SSQCFP
Trigger: AGGGAAACACTGTGAACTCAACATCGATGAATGCTT...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAAAGCATTCATCGATGTaGAGTTCACAGTGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEKHSSM*SSQCFP
Trigger: AGGGAAACACTGTGAACTCAACATCGATGAATGCTT...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCCATGGATACAGGGGTTaGAAAAGCATTCATCGATGT +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLHGYRG*KSIHRC
Trigger: ACATCGATGAATGCTTTTCAAACCCCTGTATCCATG...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTCATGGATACAGGGGTTaGAAAAGCATTCATCGATGT +
Preference number: 5 (lower is better)
Translates to: KATVTEPIVVKMSEIKSSHGYRG*KSIHRC
Trigger: ACATCGATGAATGCTTTTCAAACCCCTGTATCCATG...AGATGACTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGACTCTGTCAGAGCAGTaGCCATGGATACAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKTLSEQ*PWIQGF
Trigger: AAACCCCTGTATCCATGGCAACTGCTCTGACAGAGT...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGCATTCCCACAGACTGTaGAGGGTAATCTGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKHSHRL*RVICSV
Trigger: GACAGAGCAGATTACCCTCAACAGTCTGTGGGAATG...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAACGTGTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACAATCACACGTTCAGCCTaGGATGTGAAGAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: KRVDRPFIRHSTSQPQFTITRSA*DVKKMD
Trigger: ATCCATTTTCTTCACATCCAAGGCTGAACGTGTGAT...TGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCACACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCATTGGGTCACTTTTTaGGACCATAAGTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPIHWVTF*DHKSFP
Trigger: TGGGAATGACTTATGGTCCAAAAAAGTGACCCAATG...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGCATTGGGTCACTTTTTaGGACCATAAGTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: KRISNKATVTEPIVVKMSHWVTF*DHKSFP
Trigger: TGGGAATGACTTATGGTCCAAAAAAGTGACCCAATG...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAACATTGGGTCACTTTTTaGGACCATAAGTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEHWVTF*DHKSFP
Trigger: TGGGAATGACTTATGGTCCAAAAAAGTGACCCAATG...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGACATTGGTCTGCCTCTaGCAGCTGTTGTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMTLVCL*QLLSPA
Trigger: TGCTGGAGACAACAGCTGCAAGAGGCAGACCAATGT...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS-3UTR CAA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGAGTGCCCTTCCCACATaGGTCTGCCTCTTGCAGCTG +
Preference number: 5 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQSALPT*VCLLQL
Trigger: CAGCTGCAAGAGGCAGACCAATGTGGGAAGGGCACT...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS TCA 90 bp ATTGTCAACACTGTCCTCACATGTAGCATTATTGTGACAAGGTTTTaGCCAACAAAGAGGCATCAAGGTCTCACAGTGTGTCCCTGTGAA +
Preference number: 5 (lower is better)
Translates to: IVNTVLTCSIIVTRF*PTKRHQGLTVCPCE
Trigger: TTCACAGGGACACACTGTGAGACCTTGATGCCTCTTTGTTGGTCAAAACCTTGTCACAATAATGCTACATGTGAGGACAGTGTTGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS GCA 90 bp CAGTTTCCTCCATGCAAACAGGGGTTGGAGTTGCAGACATTTAACTaGAAACAGCCAGTGACCACTGAATTGGTAGAGATTTTGAGAAAT +
Preference number: 5 (lower is better)
Translates to: QFPPCKQGLELQTFN*KQPVTTELVEILRN
Trigger: ATTTCTCAAAATCTCTACCAATTCAGTGGTCACTGGCTGTTTGCAGTTAAATGTCTGCAACTCCAACCCCTGTTTGCATGGAGGAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 90 bp GTACAGCTCTTCCTGCTAATACACCATTTGGTTAAAGCCATGGTCTaGCATAAAATACCAGAAAGTCAAGTCATATCCCATCTCCTTGGC +
Preference number: 5 (lower is better)
Translates to: VQLFLLIHHLVKAMV*HKIPESQVISHLLG
Trigger: GCCAAGGAGATGGGATATGACTTGACTTTCTGGTATTTTATGGCAGACCATGGCTTTAACCAAATGGTGTATTAGCAGGAAGAGCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475659.1
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCATGTTGTCACAGTCTTaGTCCAAATTATTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLMLSQS*SKLLAV
Trigger: CACAGCCAATAATTTGGACAAAGACTGTGACAACAT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTGTTGGAGGTGACAACAGAAGCAACAATGGCCAGCAAGAGGATCAGTAACAAGATGTTGTCACAGTCTTaGTCCAAATTATTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LLEVTTEATMASKRISNKMLSQS*SKLLAV
Trigger: CACAGCCAATAATTTGGACAAAGACTGTGACAACAT...CTTGTTACTGATCCTCTTGCTGGCCATTGTTGCTTCTGTTGTCACCTCCAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAATGTTGTCACAGTCTTaGTCCAAATTATTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEMLSQS*SKLLAV
Trigger: CACAGCCAATAATTTGGACAAAGACTGTGACAACAT...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTGTTGGCAGGAGTTCTaGCCACAGGAACCAATGGTA +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMCWQEF*PQEPMV
Trigger: TACCATTGGTTCCTGTGGCAAGAACTCCTGCCAACA...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTTGGCAGGAGTTCTaGCCACAGGAACCAATGGTA +
Preference number: 5 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTCWQEF*PQEPMV
Trigger: TACCATTGGTTCCTGTGGCAAGAACTCCTGCCAACA...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTATCTTCCTATTTCATaGAGGCATGTAGCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRYLPIS*RHVASF
Trigger: GAACGAGGCTACATGCCTCAATGAAATAGGAAGATA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTTTACAAACTGAGCCCTaGGTTGTCACTGAGCCACTT +
Preference number: 5 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPLQTEP*VVTEPL
Trigger: AAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAA...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATCTCCATCGCTGGTGTaGTGGGAAATGAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTSPSLV*WEMNRS
Trigger: GCTTCTGTTCATTTCCCACAACACCAGCGATGGAGA...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCTCTCCATCGCTGGTGTaGTGGGAAATGAACAGAAGC +
Preference number: 5 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVSPSLV*WEMNRS
Trigger: GCTTCTGTTCATTTCCCACAACACCAGCGATGGAGA...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTAAGCAGAGCAACACCATaGCTGGTCATTCCCACTGGT +
Preference number: 5 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLSRATP*LVIPTG
Trigger: ACCAGTGGGAATGACCAGCAATGGTGTTGCTCTGCT...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTATCAATTTTAATGTCTaGGAGACAGCCTACAAACGA +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAINFNV*ETAYKR
Trigger: TCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGAT...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAACTCACACAGCCTGCCTaGACATTTAATGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: FHAHIDLECLYHKEPTTELTQPA*TFNDEP
Trigger: TGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGAG...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCCCAGACACGGATATATaGATAAGTGCTGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLPDTDI*ISAVFQ
Trigger: TTGGAAAACAGCACTTATCAATATATCCGTGTCTGG...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTAGTTCAGTCTCTTGCTaGTCAGGTAGGCCACCAATG +
Preference number: 5 (lower is better)
Translates to: KGHLPGSTHISIILLTMLSSVSC*SGRPPM
Trigger: CATTGGTGGCCTACCTGACAAGCAAGAGACTGAACT...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGTCTTGGATACAGCCTTaGAAGAATCCACCATTAAGT +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKSWIQP*KNPPLS
Trigger: ACTTAATGGTGGATTCTTCAAAGGCTGTATCCAAGA...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGATTGAGAGATGCATaGTTTGTTGGATTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKGLRDA*FVGFGK
Trigger: CTTTCCAAATCCAACAAACAATGCATCTCTCAATCC...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGGTTGTCCACTTCCATTaGCCACCTGGAGGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLVVHFH*PPGGLG
Trigger: TCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAAC...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAATGCAGGCCCTTTATATaGTCAATAGCTCTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: FHAHIDLECLYHKEPTTECRPFI*SIALSP
Trigger: GGGAGACAGAGCTATTGACAATATAAAGGGCCTGCA...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGTGCAGGCCCTTTATATaGTCAATAGCTCTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKCRPFI*SIALSP
Trigger: GGGAGACAGAGCTATTGACAATATAAAGGGCCTGCA...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTACTCTGTCAGAGCAGTaGCCATGGATACAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: KGHLPGSTHISIILLTMLTLSEQ*PWIQGF
Trigger: AAACCCCTGTATCCATGGCAACTGCTCTGACAGAGT...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAAAATCAGTCTCTCCATaGCAGGGGGTGGCATCAAGT +
Preference number: 5 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVKSVSP*QGVASS
Trigger: ACTTGATGCCACCCCCTGCAATGGAGAGACTGATTT...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTAAACCCAGGTCCCTGTaGAATACATTGGTTGTGAAA +
Preference number: 5 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPKPRSL*NTLVVK
Trigger: TTTCACAACCAATGTATTCAACAGGGACCTGGGTTT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCCATTGGAGTGGGAAGAAATaGCAGTGGTCATTCACATAT +
Preference number: 5 (lower is better)
Translates to: FPVFSAGHRLPEAIDQLHWSGKK*QWSFTY
Trigger: ATATGTGAATGACCACTGCAATTTCTTCCCACTCCA...ATGGAGTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp CCATTAGGCAGAAAGTGTGACGTTCAACCAGGAAGCAACCCACCCTTGACAATAACAGAGGCATCAGAATaGTACACAGAAAGAAATTGT +
Preference number: 5 (lower is better)
Translates to: PLGRKCDVQPGSNPPLTITEASE*YTERNC
Trigger: ACAATTTCTTTCTGTGTACAATTCTGATGCCTCTGT...TATTGTCAAGGGTGGGTTGCTTCCTGGTTGAACGTCACACTTTCTGCCTAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTATTGTGACAAGGTTTaGACCAACAAAGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: SNKATVTEPIVVKMSEIKYCDKV*TNKEAS
Trigger: TGATGCCTCTTTGTTGGTCAAAACCTTGTCACAATA...CTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp AAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATTATTGTGACAAGGTTTaGACCAACAAAGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: KYSHHIHSVWIPISKGHNYCDKV*TNKEAS
Trigger: TGATGCCTCTTTGTTGGTCAAAACCTTGTCACAATA...ATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GCTGTAGGTTCCCTGAGTTGCCCTTTTGTTGGAGGTGACAACAGAAGCAACAATAAATTTGTTCCCAGGTaGAAAAGAGGAAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: AVGSLSCPFVGGDNRSNNKFVPR*KRGKSF
Trigger: GAAACTCTTTCCTCTTTTCAACCTGGGAACAAATTT...ATTGTTGCTTCTGTTGTCACCTCCAACAAAAGGGCAACTCAGGGAACCTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CAA 90 bp TACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGGGACACAATGCTAAATTTGTTCCCAGGTaGAAAAGAGGAAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: YSHHIHSVWIPISKGHNAKFVPR*KRGKSF
Trigger: GAAACTCTTTCCTCTTTTCAACCTGGGAACAAATTT...AGCATTGTGTCCCTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCCATTGGGTCACTTTTTaGGACCATAAGTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRHWVTF*DHKSFP
Trigger: TGGGAATGACTTATGGTCCAAAAAAGTGACCCAATG...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTGGGAAAGATTGAAATCATaGGGATGCGAATTCTATAGC +
Preference number: 5 (lower is better)
Translates to: VTEPIVVKMSEIKSSANWERLKS*GCEFYS
Trigger: GCTATAGAATTCGCATCCCAATGATTTCAATCTTTC...CCAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS GCA 90 bp ATTTTACTACTAATTTGGGAGAGTTTGGAGTCAGCATTGCTAGTCTaGCGCGCTCTAGCCAGACACGGATATATTGATAAGTGCTGTTTT +
Preference number: 5 (lower is better)
Translates to: ILLLIWESLESALLV*RALARHGYIDKCCF
Trigger: AAAACAGCACTTATCAATATATCCGTGTCTGGCTAGAGCGCGGCAGACTAGCAATGCTGACTCCAAACTCTCCCAAATTAGTAGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000480086.2
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS-3UTR CAA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTTTACAAACTGAGCCCTaGGTTGTCACTGAGCCACTT +
Preference number: 5 (lower is better)
Translates to: KGHLPGSTHISIILLTMLLQTEP*VVTEPL
Trigger: AAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAA...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATTACAAACTGAGCCCTaGGTTGTCACTGAGCCACTT +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTLQTEP*VVTEPL
Trigger: AAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGATCAATTTTAATGTCTaGGAGACAGCCTACAAACGA +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKINFNV*ETAYKR
Trigger: TCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGAT...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCATCAATTTTAATGTCTaGGAGACAGCCTACAAACGA +
Preference number: 5 (lower is better)
Translates to: SEIPEVQSSHSQCVDPHLINFNV*ETAYKR
Trigger: TCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGAT...GAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACTCACACAGCCTGCCTaGACATTTAATGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTLTQPA*TFNDEP
Trigger: TGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGAG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCTCACACAGCCTGCCTaGACATTTAATGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVLTQPA*TFNDEP
Trigger: TGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGAG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCCAGACACGGATATATaGATAAGTGCTGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPPDTDI*ISAVFQ
Trigger: TTGGAAAACAGCACTTATCAATATATCCGTGTCTGG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCCAGACACGGATATATaGATAAGTGCTGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHPDTDI*ISAVFQ
Trigger: TTGGAAAACAGCACTTATCAATATATCCGTGTCTGG...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCCTAATTTGGGAGAGTTaGGAGTCAGCATTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTLIWES*ESALLV
Trigger: GACTAGCAATGCTGACTCCAAACTCTCCCAAATTAG...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAAATACATTCAAATCCTaGAAGCACCGGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTNTFKS*KHRLAL
Trigger: CAGTGCCAGCCGGTGCTTCAAGGATTTGAATGTATT...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp GTGGATAGGCCCTTTATACGTCACTCAACCTCTCAGCCTCAGTTTACACATATGTCACTGACTGCAAACTaGTCAGACTTAGCATATAAA +
Preference number: 5 (lower is better)
Translates to: VDRPFIRHSTSQPQFTHMSLTAN*SDLAYK
Trigger: TTTATATGCTAAGTCTGACAAGTTTGCAGTCAGTGA...CATATGTGTAAACTGAGGCTGAGAGGTTGAGTGACGTATAAAGGGCCTATCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCACTGACTGCAAACTaGTCAGACTTAGCATATAAA +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPISLTAN*SDLAYK
Trigger: TTTATATGCTAAGTCTGACAAGTTTGCAGTCAGTGA...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCACTGACTGCAAACTaGTCAGACTTAGCATATAAA +
Preference number: 5 (lower is better)
Translates to: SNKATVTEPIVVKMSEIKSLTAN*SDLAYK
Trigger: TTTATATGCTAAGTCTGACAAGTTTGCAGTCAGTGA...CTTGATCTCCGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTTATCCTTCAAAAAGTaGAGGCTTCCAGTAGCAATT +
Preference number: 5 (lower is better)
Translates to: CQRYLKYSHHIHSVWIPILSFKK*RLPVAI
Trigger: AATTGCTACTGGAAGCCTCAACTTTTTGAAGGATAA...GATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TTTCATGCACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAATGCCTCCGATTTCTATaGTACTTAGACACCCTTGCA +
Preference number: 5 (lower is better)
Translates to: FHAHIDLECLYHKEPTTECLRFL*YLDTLA
Trigger: TGCAAGGGTGTCTAAGTACAATAGAAATCGGAGGCA...TTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGTGCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTATCAGCAGGTCACAGATaGCCTGAAGCCATTGACCAA +
Preference number: 5 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLSAGHR*PEAIDQ
Trigger: TTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGA...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTATCTCAGTTAATAAGTaGCAGAACCAAAATTGGTGC +
Preference number: 5 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQAISVNK*QNQNWC
Trigger: GCACCAATTTTGGTTCTGCAACTTATTAACTGAGAT...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTATGGGAAGAAAAAGTTaGCCTTATCTCTCTGGAACA +
Preference number: 5 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPMGRKS*PYLSGT
Trigger: TGTTCCAGAGAGATAAGGCAAACTTTTTCTTCCCAT...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TATGTGACAAACACTCTGCTAAGACCTTGGGATAGAACAGCAACTAAGGCGGCTCAAATAACGTCTTCTTaGGAAGGGTATATCTACACA +
Preference number: 5 (lower is better)
Translates to: YVTNTLLRPWDRTATKAAQITSS*EGYIYT
Trigger: TGTGTAGATATACCCTTCCAAAGAAGACGTTATTTG...AGCCGCCTTAGTTGCTGTTCTATCCCAAGGTCTTAGCAGAGTGTTTGTCACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp ACATATAGACTTGGAATGCCTGTACCACAAAGAACCAACCACAGAAGGCAGGCTGAGAACATATTACATTaGGAACAGCCTGTAAGTACA +
Preference number: 5 (lower is better)
Translates to: TYRLGMPVPQRTNHRRQAENILH*EQPVST
Trigger: TGTACTTACAGGCTGTTCCAAATGTAATATGTTCTC...AGCCTGCCTTCTGTGGTTGGTTCTTTGTGGTACAGGCATTCCAAGTCTATATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATTATTGTGACAAGGTTTaGACCAACAAAGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHYCDKV*TNKEAS
Trigger: TGATGCCTCTTTGTTGGTCAAAACCTTGTCACAATA...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAGAGTTGCAGATTAACATaGTCAGGTATGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: RYLKYSHHIHSVWIPISKSCRLT*SGMSEI
Trigger: TATCTCTGACATACCTGACAATGTTAATCTGCAACT...CTTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAGAGGATCAGTAACAAGGCGACAGTCACTGAGCCAATAGTGGTGAAAATGTCGAAATTTGTTCCCAGGTaGAAAAGAGGAAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: KRISNKATVTEPIVVKMSKFVPR*KRGKSF
Trigger: GAAACTCTTTCCTCTTTTCAACCTGGGAACAAATTT...CGACATTTTCACCACTATTGGCTCAGTGACTGTCGCCTTGTTACTGATCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000448952.1
ENST00000484075.5
CDS-3UTR CAA 90 bp GAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATCTCGAAAAATTTGTTCCCAGGTaGAAAAGAGGAAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: EIPEVQSSHSQCVDPHLEKFVPR*KRGKSF
Trigger: GAAACTCTTTCCTCTTTTCAACCTGGGAACAAATTT...TTCGAGATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS CCA 90 bp AGAACAGTCCCTTCCTCCATAAAAAGTTCTAGAAAGGTTATCAAATaGGCAATGGCAAGTATAATTCCCAGGCAAGTTCTCACAAGTACC +
Preference number: 5 (lower is better)
Translates to: RTVPSSIKSSRKVIK*AMASIIPRQVLTST
Trigger: GGTACTTGTGAGAACTTGCCTGGGAATTATACTTGCCATTGCCCATTTGATAACCTTTCTAGAACTTTTTATGGAGGAAGGGACTGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS-3UTR CAA 90 bp CCCAGAGCTTTCTCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTCTTTGTCCAAATTATaGGCTGTGTCTGAACAAGAA +
Preference number: 5 (lower is better)
Translates to: PRAFSESMNEGQKYTSHRSLSKL*AVSEQE
Trigger: TTCTTGTTCAGACACAGCCAATAATTTGGACAAAGA...GCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGAGAAAGCTCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGCAAGGGTCTTTCATGTaGTCACAGTCTTTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKQGSFM*SQSLSK
Trigger: TTTGGACAAAGACTGTGACAACATGAAAGACCCTTG...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGACAAGTGGCACTTCCTaGACAGGGATTGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQTSGTS*TGIGEA
Trigger: TGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGT...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGTGTTGGCAGGAGTTCTaGCCACAGGAACCAATGGTA +
Preference number: 5 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLCWQEF*PQEPMV
Trigger: TACCATTGGTTCCTGTGGCAAGAACTCCTGCCAACA...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGCATGTAGCCTCGTTCTaGCAGGGATCTGAAGCACAT +
Preference number: 5 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLHVASF*QGSEAH
Trigger: ATGTGCTTCAGATCCCTGCAAGAACGAGGCTACATG...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTCCAGTGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTACAAACACATCCCTGTaGCTTCGGAAAAGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: FQCNPSCRLTLSGMSEIPTNTSL*LRKSRR
Trigger: TCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTGT...AGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACACTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAACTCCATATCAATTTTAATGTCTaGGAGACAGCCTACAAACGA +
Preference number: 5 (lower is better)
Translates to: FPVFSAGHRLPEAIDQLHINFNV*ETAYKR
Trigger: TCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGAT...ATGGAGTTGGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTCTGCTTTGACAAGGTaGGCTTTCACACCAATCCTT +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMSALTR*AFTPIL
Trigger: AAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGA...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTCTAATTTGGGAGAGTTaGGAGTCAGCATTGCTAGTC +
Preference number: 5 (lower is better)
Translates to: EPIVVKMSEIKSSANLIILIWES*ESALLV
Trigger: GACTAGCAATGCTGACTCCAAACTCTCCCAAATTAG...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGAGTTCAGTCTCTTGCTaGTCAGGTAGGCCACCAATG +
Preference number: 5 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLSSVSC*SGRPPM
Trigger: CATTGGTGGCCTACCTGACAAGCAAGAGACTGAACT...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGCATTCCCACAGACTGTaGAGGGTAATCTGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQHSHRL*RVICSV
Trigger: GACAGAGCAGATTACCCTCAACAGTCTGTGGGAATG...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGATGGCATCCAATGGATAAACTGTCCTCATGTTTTCAAACCAGGACAGCTCCTCGACAGCAACCATATTaGCATCATGTATTAGAGTTA +
Preference number: 5 (lower is better)
Translates to: RWHPMDKLSSCFQTRTAPRQQPY*HHVLEL
Trigger: TAACTCTAATACATGATGCAAATATGGTTGCTGTCG...AGGAGCTGTCCTGGTTTGAAAACATGAGGACAGTTTATCCATTGGATGCCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTGAGCATCCTGACAAGTaGCACCATTTAAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: EPIVVKMSEIKSSANLIIEHPDK*HHLNKA
Trigger: AGCCTTGTTTAAATGGTGCAACTTGTCAGGATGCTC...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCGAGCATCCTGACAAGTaGCACCATTTAAACAAGGCT +
Preference number: 5 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVEHPDK*HHLNKA
Trigger: AGCCTTGTTTAAATGGTGCAACTTGTCAGGATGCTC...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ATGTCAGAGATACCTGAAGTACAGTCATCACATTCACAGTGTGTGGATCCCCATAGTTGCAGATTAACATaGTCAGGTATGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: MSEIPEVQSSHSQCVDPHSCRLT*SGMSEI
Trigger: TATCTCTGACATACCTGACAATGTTAATCTGCAACT...ATGGGGATCCACACACTGTGAATGTGATGACTGTACTTCAGGTATCTCTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp CAAGTCATCTGCCAACTGGAAAGATTGAAATCATTGGGATGCGAATTCTATAGCTGCCAACTGGAAAGATaGAAATCATTGGGATGCGAA +
Preference number: 5 (lower is better)
Translates to: QVICQLERLKSLGCEFYSCQLER*KSLGCE
Trigger: TTCGCATCCCAATGATTTCAATCTTTCCAGTTGGCA...GCTATAGAATTCGCATCCCAATGATTTCAATCTTTCCAGTTGGCAGATGACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS GCA 90 bp TCCAGCACAGCCTTGGGTTACATTGACAAGAACTGGATTGAGAGATaGATTGTTTGTTGGATTTGGAAAGAATTCCAGATTTTGGTTGTT +
Preference number: 5 (lower is better)
Translates to: SSTALGYIDKNWIER*IVCWIWKEFQILVV
Trigger: AACAACCAAAATCTGGAATTCTTTCCAAATCCAACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 90 bp ATCAATTTTAATGTCTTGGAGACAGCCTACAAACGAAGGTGTGGATaGCATATTATAGAAGTTAAGCAGAGCAACACCATTGCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: INFNVLETAYKRRCG*HIIEVKQSNTIAGH
Trigger: ATGACCAGCAATGGTGTTGCTCTGCTTAACTTCTATAATATGCCATCCACACCTTCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAGAGAGGCACCTGGTGTaGTTTTTATTGCAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTERHLV*FLLQKE
Trigger: TTCCTTTTGCAATAAAAACAACACCAGGTGCCTCTC...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCTATCTTCCTATTTCATaGAGGCATGTAGCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVYLPIS*RHVASF
Trigger: GAACGAGGCTACATGCCTCAATGAAATAGGAAGATA...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATATCTTCCTATTTCATaGAGGCATGTAGCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTYLPIS*RHVASF
Trigger: GAACGAGGCTACATGCCTCAATGAAATAGGAAGATA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAGCCAATAGTGGTGAAAATGTCGGAGATCAAGTCATCTGCCAACTTAATTATTTTACTATTGCATTCATaGAGGTCGATCTCACACTGG +
Preference number: 5 (lower is better)
Translates to: EPIVVKMSEIKSSANLIILLLHS*RSISHW
Trigger: CCAGTGTGAGATCGACCTCAATGAATGCAATAGTAA...AATAATTAAGTTGGCAGATGACTTGATCTCCGACATTTTCACCACTATTGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484075.5
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATTACTATTGCATTCATaGAGGTCGATCTCACACTGG +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTLLLHS*RSISHW
Trigger: CCAGTGTGAGATCGACCTCAATGAATGCAATAGTAA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTATTTGAAGAACATTCATaGACGTCTTCTTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVFEEHS*TSSSQW
Trigger: CCACTGCGAAGAAGACGTCAATGAATGTTCTTCAAA...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATTTGAAGAACATTCATaGACGTCTTCTTCGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTFEEHS*TSSSQW
Trigger: CCACTGCGAAGAAGACGTCAATGAATGTTCTTCAAA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGTTACAAACTGAGCCCTaGGTTGTCACTGAGCCACTT +
Preference number: 5 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLLQTEP*VVTEPL
Trigger: AAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAA...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGACAAACACATCCCTGTaGCTTCGGAAAAGTAGAAGA +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMTNTSL*LRKSRR
Trigger: TCTTCTACTTTTCCGAAGCAACAGGGATGTGTTTGT...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGCTCACACAGCCTGCCTaGACATTTAATGATGAGCCA +
Preference number: 5 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLLTQPA*TFNDEP
Trigger: TGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGAG...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGGGATTGAGAGATGCATaGTTTGTTGGATTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKGLRDA*FVGFGK
Trigger: CTTTCCAAATCCAACAAACAATGCATCTCTCAATCC...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTACATGGATACAGGGGTTaGAAAAGCATTCATCGATGT +
Preference number: 5 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVHGYRG*KSIHRC
Trigger: ACATCGATGAATGCTTTTCAAACCCCTGTATCCATG...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACACATTGGGTCACTTTTTaGGACCATAAGTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTHWVTF*DHKSFP
Trigger: TGGGAATGACTTATGGTCCAAAAAAGTGACCCAATG...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAATGTTGTCACAGTCTTaGTCCAAATTATTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTMLSQS*SKLLAV
Trigger: CACAGCCAATAATTTGGACAAAGACTGTGACAACAT...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGTCTGCTTTGACAAGGTaGGCTTTCACACCAATCCTT +
Preference number: 5 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLSALTR*AFTPIL
Trigger: AAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGA...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCCCAGACACGGATATATaGATAAGTGCTGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVPDTDI*ISAVFQ
Trigger: TTGGAAAACAGCACTTATCAATATATCCGTGTCTGG...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCGAGATGCATTGTTTGTaGGATTTGGAAAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTEMHCL*DLERIP
Trigger: TGGAATTCTTTCCAAATCCAACAAACAATGCATCTC...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAGGATTGAGAGATGCATaGTTTGTTGGATTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTGLRDA*FVGFGK
Trigger: CTTTCCAAATCCAACAAACAATGCATCTCTCAATCC...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp ATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACAAAAGGTGTTTCGTaGTCCACTTCCATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: MNEGQKYTSHRWYTTITLTKGVS*STSICH
Trigger: GTGGCAAATGGAAGTGGACAACGAAACACCTTTTGT...CAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTACATGGATACAGGGGTTaGAAAAGCATTCATCGATGT +
Preference number: 5 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLHGYRG*KSIHRC
Trigger: ACATCGATGAATGCTTTTCAAACCCCTGTATCCATG...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp ATTCTAATTTTCCTGTATTTTCAGCAGGTCACAGATTGCCTGAAGCCATTGACCAGAGCATTAGTGTGGTaGCCACCTTATATAAATGTT +
Preference number: 5 (lower is better)
Translates to: ILIFLYFQQVTDCLKPLTRALVW*PPYINV
Trigger: AACATTTATATAAGGTGGCAACCACACTAATGCTCT...GGTCAATGGCTTCAGGCAATCTGTGACCTGCTGAAAATACAGGAAAATTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp GAAAGAGTTTCAGTGATAGCCACTAAAGCCACAGAAGACTTTATTCTCTGGAAGAGTTGCAGATTAACATaGTCAGGTATGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: ERVSVIATKATEDFILWKSCRLT*SGMSEI
Trigger: TATCTCTGACATACCTGACAATGTTAATCTGCAACT...CTTCCAGAGAATAAAGTCTTCTGTGGCTTTAGTGGCTATCACTGAAACTCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS CCA 90 bp GGATTTGGAAAGAATTCCAGATTTTGGTTGTTTAGTCTTACATCTTaGATACAGCCTTTGAAGAATCCACCATTAAGTTCAGTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: GFGKNSRFWLFSLTS*IQPLKNPPLSSVSC
Trigger: GCAAGAGACTGAACTTAATGGTGGATTCTTCAAAGGCTGTATCCAAGATGTAAGACTAAACAACCAAAATCTGGAATTCTTTCCAAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS-3UTR CAA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGTATCTTCCTATTTCATaGAGGCATGTAGCCTCGTTC +
Preference number: 5 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQYLPIS*RHVASF
Trigger: GAACGAGGCTACATGCCTCAATGAAATAGGAAGATA...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGTTACTATTGCATTCATaGAGGTCGATCTCACACTGG +
Preference number: 5 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQLLLHS*RSISHW
Trigger: CCAGTGTGAGATCGACCTCAATGAATGCAATAGTAA...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATCAATTTTAATGTCTaGGAGACAGCCTACAAACGA +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTINFNV*ETAYKR
Trigger: TCGTTTGTAGGCTGTCTCCAAGACATTAAAATTGAT...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTAATTTTACTACTAATTaGGGAGAGTTTGGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: KGHLPGSTHISIILLTMLNFTTN*GEFGVS
Trigger: GCTGACTCCAAACTCTCCCAAATTAGTAGTAAAATT...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGAATTTTACTACTAATTaGGGAGAGTTTGGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMNFTTN*GEFGVS
Trigger: GCTGACTCCAAACTCTCCCAAATTAGTAGTAAAATT...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TATAATAAAACAATGGTGTCGAGCGGAACCACTGTGAAAGTTTTTAAGGTGGTCAATTTTACTACTAATTaGGGAGAGTTTGGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: YNKTMVSSGTTVKVFKVVNFTTN*GEFGVS
Trigger: GCTGACTCCAAACTCTCCCAAATTAGTAGTAAAATT...GACCACCTTAAAAACTTTCACAGTGGTTCCGCTCGACACCATTGTTTTATTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp GAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACAGAGATGCATTGTTTGTaGGATTTGGAAAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: EGQKYTSHRWYTTITLTTEMHCL*DLERIP
Trigger: TGGAATTCTTTCCAAATCCAACAAACAATGCATCTC...TGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TGTAATCCCAGTTGCAGATTAACATTGTCAGGTATGTCAGAGATACCTGAAGTAGAGATGCATTGTTTGTaGGATTTGGAAAGAATTCCA +
Preference number: 5 (lower is better)
Translates to: CNPSCRLTLSGMSEIPEVEMHCL*DLERIP
Trigger: TGGAATTCTTTCCAAATCCAACAAACAATGCATCTC...TACTTCAGGTATCTCTGACATACCTGACAATGTTAATCTGCAACTGGGATTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAAGGATTGAGAGATGCATaGTTTGTTGGATTTGGAAAG +
Preference number: 5 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIEGLRDA*FVGFGK
Trigger: CTTTCCAAATCCAACAAACAATGCATCTCTCAATCC...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AAAGGGCACTTGCCAGGGAGCACTCACATATCCATTATTTTATTAACTATGCTTTTATCCTTCAAAAAGTaGAGGCTTCCAGTAGCAATT +
Preference number: 5 (lower is better)
Translates to: KGHLPGSTHISIILLTMLLSFKK*RLPVAI
Trigger: AATTGCTACTGGAAGCCTCAACTTTTTGAAGGATAA...AAGCATAGTTAATAAAATAATGGATATGTGAGTGCTCCCTGGCAAGTGCCCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGTTATCCTTCAAAAAGTaGAGGCTTCCAGTAGCAATT +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMLSFKK*RLPVAI
Trigger: AATTGCTACTGGAAGCCTCAACTTTTTGAAGGATAA...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACATTATCCTTCAAAAAGTaGAGGCTTCCAGTAGCAATT +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTLSFKK*RLPVAI
Trigger: AATTGCTACTGGAAGCCTCAACTTTTTGAAGGATAA...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS-3UTR CAA 90 bp AAAATACCCAGAAATGGAGTGGGAAGAAATTGCAGTGGTCATTCACATATAGAACAAGTCTCAGGTAAATaGAAGTTTTCTTCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: KIPRNGVGRNCSGHSHIEQVSGK*KFSSSW
Trigger: CCAGGAAGAAGAAAACTTCAATTTACCTGAGACTTG...TTCTATATGTGAATGACCACTGCAATTTCTTCCCACTCCATTTCTGGGTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp AGGACAAAAGTATACATCCCATCGCTGGTATACAACAATAACTTTGACCACATGAGTTGCAGATTAACATaGTCAGGTATGTCAGAGATA +
Preference number: 5 (lower is better)
Translates to: RTKVYIPSLVYNNNFDHMSCRLT*SGMSEI
Trigger: TATCTCTGACATACCTGACAATGTTAATCTGCAACT...CATGTGGTCAAAGTTATTGTTGTATACCAGCGATGGGATGTATACTTTTGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp TCTGAATCCATGAATGAAGGACAAAAGTATACATCCCATCGCTGGTATACAACAAAATTTGTTCCCAGGTaGAAAAGAGGAAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SESMNEGQKYTSHRWYTTKFVPR*KRGKSF
Trigger: GAAACTCTTTCCTCTTTTCAACCTGGGAACAAATTT...TGTTGTATACCAGCGATGGGATGTATACTTTTGTCCTTCATTCATGGATTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000367400.8
ENST00000448952.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
CDS-3UTR CAA 90 bp AGTTGCTCCCAGTTTGAAATGATTGTCACTACTCCAAAGGATATGAATTTGCTACTGAAATTAGTCCATTaGATAGAAAAGTCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: SCSQFEMIVTTPKDMNLLLKLVH*IEKSRS
Trigger: GCTCCTTGACTTTTCTATCAAATGGACTAATTTCAG...TAGCAAATTCATATCCTTTGGAGTAGTGACAATCATTTCAAACTGGGAGCAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367397.1
CDS-3UTR CAA 90 bp TGTAGTTTCCATGTAAACATATGGCAGTTTACACAGAAACTACAGAAAGTACAGTCACTGACTGCAAACTaGTCAGACTTAGCATATAAA +
Preference number: 5 (lower is better)
Translates to: CSFHVNIWQFTQKLQKVQSLTAN*SDLAYK
Trigger: TTTATATGCTAAGTCTGACAAGTTTGCAGTCAGTGA...CTGTACTTTCTGTAGTTTCTGTGTAAACTGCCATATGTTTACATGGAAACTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
CDS TCA 72 bp GCACCGGCTGGCACTGGGCTCCGTGAGGACACGGGCTaGATCCACACCACTGAACCTCCTCACAGGCTTTCC +
Preference number: 6 (lower is better)
Translates to: APAGTGLREDTG*IHTTEPPHRLS
Trigger: GGAAAGCCTGTGAGGAGGTTCAGTGGTGTGGATTCAGCCCGTGTCCTCACGGAGCCCAGTGCCAGCCGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 72 bp AACAGCAGGGCCTCCTTTCAGCAGATGCGGGGCAGTTaGCAGCATGCAACCATTTCATGCTGCAGCAGAAGA +
Preference number: 6 (lower is better)
Translates to: NSRASFQQMRGS*QHATISCCSRR
Trigger: TCTTCTGCTGCAGCATGAAATGGTTGCATGCTGCCAACTGCCCCGCATCTGCTGAAAGGAGGCCCTGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476483.1
CDS CAA 72 bp CCCACAGGAAGCCATCGCCCTCAAATGAAAGTGTGGTaGCGATTTCACACAGGGACCCGGTGTAGCCAGATG +
Preference number: 6 (lower is better)
Translates to: PTGSHRPQMKVW*RFHTGTRCSQM
Trigger: CATCTGGCTACACCGGGTCCCTGTGTGAAATCGCAACCACACTTTCATTTGAGGGCGATGGCTTCCTGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp TACTTAGGTCCTCTGGATCCCAACTCAGTGAGTGCCCTTCCCACATaGGTCTGCCTCTTGCAGCTGTTGTCTCCAGCACAGCCTTGGGTT +
Preference number: 6 (lower is better)
Translates to: YLGPLDPNSVSALPT*VCLLQLLSPAQPWV
Trigger: AACCCAAGGCTGTGCTGGAGACAACAGCTGCAAGAGGCAGACCAATGTGGGAAGGGCACTCACTGAGTTGGGATCCAGAGGACCTAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS TCA 72 bp GCCACTTTTGACCCACAGGAAGCCATCGCCCTCAAATaGAAGTGTGGTTGCGATTTCACACAGGGACCCGGT +
Preference number: 6 (lower is better)
Translates to: ATFDPQEAIALK*KCGCDFTQGPG
Trigger: ACCGGGTCCCTGTGTGAAATCGCAACCACACTTTCATTTGAGGGCGATGGCTTCCTGTGGGTCAAAAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 72 bp AAGTCATCCCACCGGGAATGGCAAACACCTCCATTGTaGCAGGGGTTGGACTTGCAGCTGTTGTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: KSSHREWQTPPL*QGLDLQLLSPA
Trigger: TGCTGGAGACAACAGCTGCAAGTCCAACCCCTGTCACAATGGAGGTGTTTGCCATTCCCGGTGGGATGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp ACCAGTGTATCCAGGCTCACATGTGCAGTGGTAGGCTaGAACTCTGTCAGAGCAGTTGCCATGGATACAGGG +
Preference number: 6 (lower is better)
Translates to: TSVSRLTCAVVG*NSVRAVAMDTG
Trigger: CCCTGTATCCATGGCAACTGCTCTGACAGAGTTGCAGCCTACCACTGCACATGTGAGCCTGGATACACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 72 bp GTCTTATTTAGAGAACATCCTCTGGTGTGTTGCTGGTaGTCTGGTCCCAGTCCGGCTCCTGATCCCTGTCTG +
Preference number: 6 (lower is better)
Translates to: VLFREHPLVCCW*SGPSPAPDPCL
Trigger: CAGACAGGGATCAGGAGCCGGACTGGGACCAGACCACCAGCAACACACCAGAGGATGTTCTCTAAATAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS TCA 72 bp GCCTGTGGCAGTCACACTGGTAACTCAGCCACAAGTTaGTGCAGCGTCCTCTGCTTTGACAAGGTTGGCTTT +
Preference number: 6 (lower is better)
Translates to: ACGSHTGNSATS*CSVLCFDKVGF
Trigger: AAAGCCAACCTTGTCAAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTTACCAGTGTGACTGCCACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp CTGGTCACAAAAGGTGTTTCGTTGTCCACTTCCATTTaGCACCTGGAGGTCTGGGACAGTGGGTCTGTCATG +
Preference number: 6 (lower is better)
Translates to: LVTKGVSLSTSI*HLEVWDSGSVM
Trigger: CATGACAGACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAACGAAACACCTTTTGTGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp CTTCACAGTTCACACCAGTGTATCCAGGCTCACATGTaGAGTGGTAGGCTGCAACTCTGTCAGAGCAGTTGC +
Preference number: 6 (lower is better)
Translates to: LHSSHQCIQAHM*SGRLQLCQSSC
Trigger: GCAACTGCTCTGACAGAGTTGCAGCCTACCACTGCACATGTGAGCCTGGATACACTGGTGTGAACTGTGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 72 bp ATGGTCTTATTTAGAGAACATCCTCTGGTGTGTTGCTaGTGGTCTGGTCCCAGTCCGGCTCCTGATCCCTGT +
Preference number: 6 (lower is better)
Translates to: MVLFREHPLVCC*WSGPSPAPDPC
Trigger: ACAGGGATCAGGAGCCGGACTGGGACCAGACCACCAGCAACACACCAGAGGATGTTCTCTAAATAAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 72 bp GCTGGTCACAAAAGGTGTTTCGTTGTCCACTTCCATTaGCCACCTGGAGGTCTGGGACAGTGGGTCTGTCAT +
Preference number: 6 (lower is better)
Translates to: AGHKRCFVVHFH*PPGGLGQWVCH
Trigger: ATGACAGACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAACGAAACACCTTTTGTGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp AGTGCCCTTCCCACATTGGTCTGCCTCTTGCAGCTGTaGTCTCCAGCACAGCCTTGGGTTACATTGACAAGA +
Preference number: 6 (lower is better)
Translates to: SALPTLVCLLQL*SPAQPWVTLTR
Trigger: TCTTGTCAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGCAAGAGGCAGACCAATGTGGGAAGGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS CAA 90 bp AGGGCTATGTTACAAACTGAGCCCTTGGTTGTCACTGAGCCACTTTaGACCCACAGGAAGCCATCGCCCTCAAATGAAAGTGTGGTTGCG +
Preference number: 6 (lower is better)
Translates to: RAMLQTEPLVVTEPL*THRKPSPSNESVVA
Trigger: CGCAACCACACTTTCATTTGAGGGCGATGGCTTCCTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAACATAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp GTCACACTGGTAACTCAGCCACAAGTTGATGCAGCGTCCTCTGCTTaGACAAGGTTGGCTTTCACACCAATCCTTTCTCACACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: VTLVTQPQVDAASSA*TRLAFTPILSHTAC
Trigger: GCAGGCTGTGTGAGAAAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTTACCAGTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp AGCAATTGTGCTGGTCACAAAAGGTGTTTCGTTGTCCACTTCCATTaGCCACCTGGAGGTCTGGGACAGTGGGTCTGTCATGGAAAGGGT +
Preference number: 6 (lower is better)
Translates to: SNCAGHKRCFVVHFH*PPGGLGQWVCHGKG
Trigger: ACCCTTTCCATGACAGACCCACTGTCCCAGACCTCCAGGTGGCAAATGGAAGTGGACAACGAAACACCTTTTGTGACCAGCACAATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp CAGGGGCACAGTCGCAGAAATAGGCCCCCAGAGCATCCTGACAAGTaGCACCATTTAAACAAGGCTGGGACCAACATTCGTCAATTTCCA +
Preference number: 6 (lower is better)
Translates to: QGHSRRNRPPEHPDK*HHLNKAGTNIRQFP
Trigger: TGGAAATTGACGAATGTTGGTCCCAGCCTTGTTTAAATGGTGCAACTTGTCAGGATGCTCTGGGGGCCTATTTCTGCGACTGTGCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 90 bp AACTCAGTGAGTGCCCTTCCCACATTGGTCTGCCTCTTGCAGCTGTaGTCTCCAGCACAGCCTTGGGTTACATTGACAAGAACTGGATTG +
Preference number: 6 (lower is better)
Translates to: NSVSALPTLVCLLQL*SPAQPWVTLTRTGL
Trigger: CAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGCAAGAGGCAGACCAATGTGGGAAGGGCACTCACTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS TCA 72 bp AGAAGGCAGTCCAGTGATGCGTCCATATTGTTTCTCTaGGGACAGCTCCACACATTCCCCATTGGACTGGCA +
Preference number: 6 (lower is better)
Translates to: RRQSSDASILFL*GQLHTFPIGLA
Trigger: TGCCAGTCCAATGGGGAATGTGTGGAGCTGTCCTCAGAGAAACAATATGGACGCATCACTGGACTGCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS GCA 72 bp TGGGACAGTGGGTCTGTCATGGAAAGGGTCACTTCGTaGCATGTGCCATCATTCACTGACTGCAAACTTGTC +
Preference number: 6 (lower is better)
Translates to: WDSGSVMERVTS*HVPSFTDCKLV
Trigger: GACAAGTTTGCAGTCAGTGAATGATGGCACATGGCACGAAGTGACCCTTTCCATGACAGACCCACTGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 72 bp ACAGAAAGCTCCTTTCTCCTGGGGTGTTCACACAAGTaGCACTTCCTTGACAGGGATTGGAGAAGCAAGGGT +
Preference number: 6 (lower is better)
Translates to: TESSFLLGCSHK*HFLDRDWRSKG
Trigger: ACCCTTGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCCCAGGAGAAAGGAGCTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 72 bp CCACAAGTTGATGCAGCGTCCTCTGCTTTGACAAGGTaGGCTTTCACACCAATCCTTTCTCACACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: PQVDAASSALTR*AFTPILSHTAC
Trigger: GCAGGCTGTGTGAGAAAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGCATCAACTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp CAGAAAGCTCCTTTCTCCTGGGGTGTTCACACAAGTGGCACTTCCTaGACAGGGATTGGAGAAGCAAGGGTCTTTCATGTTGTCACAGTC +
Preference number: 6 (lower is better)
Translates to: QKAPFSWGVHTSGTS*TGIGEARVFHVVTV
Trigger: GACTGTGACAACATGAAAGACCCTTGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCCCAGGAGAAAGGAGCTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 90 bp CCAATGGTAGTTTCACAGATTGTCCCACTGTACCCAGGAGGACATTaGCACAGAAAGCTCCTTTCTCCTGGGGTGTTCACACAAGTGGCA +
Preference number: 6 (lower is better)
Translates to: PMVVSQIVPLYPGGH*HRKLLSPGVFTQVA
Trigger: TGCCACTTGTGTGAACACCCCAGGAGAAAGGAGCTTTCTGTGCAAATGTCCTCCTGGGTACAGTGGGACAATCTGTGAAACTACCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS TCA 72 bp CTTTCTCCTGGGGTGTTCACACAAGTGGCACTTCCTTaGCAGGGATTGGAGAAGCAAGGGTCTTTCATGTTG +
Preference number: 6 (lower is better)
Translates to: LSPGVFTQVALP*QGLEKQGSFML
Trigger: CAACATGAAAGACCCTTGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCCCAGGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS TCA 72 bp TACAAACTGAGCCCTTGGTTGTCACTGAGCCACTTTTaGCCCACAGGAAGCCATCGCCCTCAAATGAAAGTG +
Preference number: 6 (lower is better)
Translates to: YKLSPWLSLSHF*PTGSHRPQMKV
Trigger: CACTTTCATTTGAGGGCGATGGCTTCCTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp AGGGTCACAGCCTCTGCAAATATTACCTCCACGAAATaGCACTCTCCATCGCTGGTGTTGTGGGAAATGAAC +
Preference number: 6 (lower is better)
Translates to: RVTASANITSTK*HSPSLVLWEMN
Trigger: GTTCATTTCCCACAACACCAGCGATGGAGAGTGGCATTTCGTGGAGGTAATATTTGCAGAGGCTGTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp CCTTTCTCCTGGGGTGTTCACACAAGTGGCACTTCCTaGACAGGGATTGGAGAAGCAAGGGTCTTTCATGTT +
Preference number: 6 (lower is better)
Translates to: PFSWGVHTSGTS*TGIGEARVFHV
Trigger: AACATGAAAGACCCTTGCTTCTCCAATCCCTGTCAAGGAAGTGCCACTTGTGTGAACACCCCAGGAGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 72 bp AGTCGCAGAAATAGGCCCCCAGAGCATCCTGACAAGTaGCACCATTTAAACAAGGCTGGGACCAACATTCGT +
Preference number: 6 (lower is better)
Translates to: SRRNRPPEHPDK*HHLNKAGTNIR
Trigger: ACGAATGTTGGTCCCAGCCTTGTTTAAATGGTGCAACTTGTCAGGATGCTCTGGGGGCCTATTTCTGCGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 90 bp GTAACTCAGCCACAAGTTGATGCAGCGTCCTCTGCTTTGACAAGGTaGGCTTTCACACCAATCCTTTCTCACACAGCCTGCCTTGACATT +
Preference number: 6 (lower is better)
Translates to: VTQPQVDAASSALTR*AFTPILSHTACLDI
Trigger: AATGTCAAGGCAGGCTGTGTGAGAAAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp GAGCAGTTGCCATGGATACAGGGGTTTGAAAAGCATTCATCGATGTaGAGTTCACAGTGTTTCCCTGACCATCCCAAGGGACAGGAGCAA +
Preference number: 6 (lower is better)
Translates to: EQLPWIQGFEKHSSM*SSQCFPDHPKGQEQ
Trigger: TTGCTCCTGTCCCTTGGGATGGTCAGGGAAACACTGTGAACTCAACATCGATGAATGCTTTTCAAACCCCTGTATCCATGGCAACTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 72 bp TTCATTGAGGCATGTAGCCTCGTTCTTGCAGGGATCTaGAGCACATTCATCCACTTCCAAGTCGCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: FIEACSLVLAGI*STFIHFQVAVS
Trigger: AGACACTGCGACTTGGAAGTGGATGAATGTGCTTCAGATCCCTGCAAGAACGAGGCTACATGCCTCAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS TCA 72 bp GTGCTGTTTTCCAAAGCTAGAAGTAAGCCTGATGGTTaGAGCGTTCGGACAAACATGGAGAGGCTGATGGTG +
Preference number: 6 (lower is better)
Translates to: VLFSKARSKPDG*SVRTNMERLMV
Trigger: CACCATCAGCCTCTCCATGTTTGTCCGAACGCTTCAACCATCAGGCTTACTTCTAGCTTTGGAAAACAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000480086.2
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 72 bp AAGTCAAGTCATATCCCATCTCCTTGGCCTCACCTGTaGATCCAGGCTGACAGATACAGACATAACCTGAGG +
Preference number: 6 (lower is better)
Translates to: KSSHIPSPWPHL*IQADRYRHNLR
Trigger: CCTCAGGTTATGTCTGTATCTGTCAGCCTGGATTCACAGGTGAGGCCAAGGAGATGGGATATGACTTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475659.1
CDS TCA 72 bp TCCAGTTGCCCAAGATCCTACACAGAAGCGAAACAGTaGAACTTGGTACTTAGGTCCTCTGGATCCCAACTC +
Preference number: 6 (lower is better)
Translates to: SSCPRSYTEAKQ*NLVLRSSGSQL
Trigger: GAGTTGGGATCCAGAGGACCTAAGTACCAAGTTTCACTGTTTCGCTTCTGTGTAGGATCTTGGGCAACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS GCA 72 bp GTGGGTCTGTCATGGAAAGGGTCACTTCGTGCCATGTaGCATCATTCACTGACTGCAAACTTGTCAGACTTA +
Preference number: 6 (lower is better)
Translates to: VGLSWKGSLRAM*HHSLTANLSDL
Trigger: TAAGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACATGGCACGAAGTGACCCTTTCCATGACAGACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp ATGTGCAGTGGTAGGCTGCAACTCTGTCAGAGCAGTTaGCATGGATACAGGGGTTTGAAAAGCATTCATCGA +
Preference number: 6 (lower is better)
Translates to: MCSGRLQLCQSS*HGYRGLKSIHR
Trigger: TCGATGAATGCTTTTCAAACCCCTGTATCCATGGCAACTGCTCTGACAGAGTTGCAGCCTACCACTGCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp AACAAGATACTTTTCATGCCCACAAGGGGGACCCTTTaGACCACAGCAGCAGAGTTTACACAGTACAGCTCT +
Preference number: 6 (lower is better)
Translates to: NKILFMPTRGTL*TTAAEFTQYSS
Trigger: AGAGCTGTACTGTGTAAACTCTGCTGCTGTGGTGCAAAGGGTCCCCCTTGTGGGCATGAAAAGTATCTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475659.1
CDS CAA 72 bp TTACAAACTGAGCCCTTGGTTGTCACTGAGCCACTTTaGACCCACAGGAAGCCATCGCCCTCAAATGAAAGT +
Preference number: 6 (lower is better)
Translates to: LQTEPLVVTEPL*THRKPSPSNES
Trigger: ACTTTCATTTGAGGGCGATGGCTTCCTGTGGGTCAAAAGTGGCTCAGTGACAACCAAGGGCTCAGTTTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp GTAACTCAGCCACAAGTTGATGCAGCGTCCTCTGCTTaGACAAGGTTGGCTTTCACACCAATCCTTTCTCAC +
Preference number: 6 (lower is better)
Translates to: VTQPQVDAASSA*TRLAFTPILSH
Trigger: GTGAGAAAGGATTGGTGTGAAAGCCAACCTTGTCAAAGCAGAGGACGCTGCATCAACTTGTGGCTGAGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp TCCCACATTGGTCTGCCTCTTGCAGCTGTTGTCTCCAGCACAGCCTaGGGTTACATTGACAAGAACTGGATTGAGAGATGCATTGTTTGT +
Preference number: 6 (lower is better)
Translates to: SHIGLPLAAVVSSTA*GYIDKNWIERCIVC
Trigger: ACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGCAAGAGGCAGACCAATGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS CAA 90 bp GGGTTGGACTTGCAGCTGTTGTCTCCAGCACAGCCTTGGGTTACATaGACAAGAACTGGATTGAGAGATGCATTGTTTGTTGGATTTGGA +
Preference number: 6 (lower is better)
Translates to: GLDLQLLSPAQPWVT*TRTGLRDALFVGFG
Trigger: TCCAAATCCAACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGCAAGTCCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp ATTGTGACAGGGGTTGGACTTGCAGCTGTTGTCTCCAGCACAGCCTaGGGTTACATTGACAAGAACTGGATTGAGAGATGCATTGTTTGT +
Preference number: 6 (lower is better)
Translates to: IVTGVGLAAVVSSTA*GYIDKNWIERCIVC
Trigger: ACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGCAAGTCCAACCCCTGTCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp GTCTGCCTCTTGCAGCTGTTGTCTCCAGCACAGCCTTGGGTTACATaGACAAGAACTGGATTGAGAGATGCATTGTTTGTTGGATTTGGA +
Preference number: 6 (lower is better)
Translates to: VCLLQLLSPAQPWVT*TRTGLRDALFVGFG
Trigger: TCCAAATCCAACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGCAAGAGGCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS TCA 72 bp GGCTTTCACACCAATCCTTTCTCACACAGCCTGCCTTaGCATTTAATGATGAGCCAGACGAGATGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: GFHTNPFSHSLP*HLMMSQTRCSP
Trigger: TGGAGAACATCTCGTCTGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGAGAAAGGATTGGTGTGAAAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 72 bp TCTGGAACTCTGTGCAGTTGCCTCCATTGTAGCAAGTaGGATTTGTCTTCTCATTCCCACAGACTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: SGTLCSCLHCSK*DLSSHSHRLLR
Trigger: CCTCAACAGTCTGTGGGAATGAGAAGACAAATCTCACTTGCTACAATGGAGGCAACTGCACAGAGTTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp CTAATTTGGGAGAGTTTGGAGTCAGCATTGCTAGTCTaGCGCGCTCTAGCCAGACACGGATATATTGATAAG +
Preference number: 6 (lower is better)
Translates to: LIWESLESALLV*RALARHGYIDK
Trigger: CTTATCAATATATCCGTGTCTGGCTAGAGCGCGGCAGACTAGCAATGCTGACTCCAAACTCTCCCAAATTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000480086.2
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp TGGCTTTCACACCAATCCTTTCTCACACAGCCTGCCTaGACATTTAATGATGAGCCAGACGAGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: WLSHQSFLTQPA*TFNDEPDEMFS
Trigger: GGAGAACATCTCGTCTGGCTCATCATTAAATGTCAAGGCAGGCTGTGTGAGAAAGGATTGGTGTGAAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp CCATGGATACAGGGGTTTGAAAAGCATTCATCGATGTaGAGTTCACAGTGTTTCCCTGACCATCCCAAGGGA +
Preference number: 6 (lower is better)
Translates to: PWIQGFEKHSSM*SSQCFPDHPKG
Trigger: TCCCTTGGGATGGTCAGGGAAACACTGTGAACTCAACATCGATGAATGCTTTTCAAACCCCTGTATCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 72 bp AAAGTAGAAGAGCCATTGGCTGAACAGTCTGAAACCTaGGGGCTATGTTACAAACTGAGCCCTTGGTTGTCA +
Preference number: 6 (lower is better)
Translates to: KVEEPLAEQSET*GLCYKLSPWLS
Trigger: TGACAACCAAGGGCTCAGTTTGTAACATAGCCCTCAGGTTTCAGACTGTTCAGCCAATGGCTCTTCTACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS TCA 72 bp AAGTCATCCCACCGGGAATGGCAAACACCTCCATTGTaGCAGGGGTTGGATCCTGGTTTTATAGATGATAAA +
Preference number: 6 (lower is better)
Translates to: KSSHREWQTPPL*QGLDPGFIDDK
Trigger: TTTATCATCTATAAAACCAGGATCCAACCCCTGTCACAATGGAGGTGTTTGCCATTCCCGGTGGGATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535699.5
CDS GCA 72 bp CCATGCAAACAGGGGTTGGAGTTGCAGACATTTAACTaGAAACAGCCAGTGACCACTGAATTGGTAGAGATT +
Preference number: 6 (lower is better)
Translates to: PCKQGLELQTFN*KQPVTTELVEI
Trigger: AATCTCTACCAATTCAGTGGTCACTGGCTGTTTGCAGTTAAATGTCTGCAACTCCAACCCCTGTTTGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp ATAGCCATTAGTATGACTAATGCAGGTGGCTCCATTTaGACACTGGTGACTCTGGCAGTTGTCTATATCCAC +
Preference number: 6 (lower is better)
Translates to: IAISMTNAGGSI*TLVTLAVVYIH
Trigger: GTGGATATAGACAACTGCCAGAGTCACCAGTGTGCAAATGGAGCCACCTGCATTAGTCATACTAATGGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp ATTTTACTACTAATTTGGGAGAGTTTGGAGTCAGCATaGCTAGTCTGCCGCGCTCTAGCCAGACACGGATAT +
Preference number: 6 (lower is better)
Translates to: ILLLIWESLESA*LVCRALARHGY
Trigger: ATATCCGTGTCTGGCTAGAGCGCGGCAGACTAGCAATGCTGACTCCAAACTCTCCCAAATTAGTAGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000480086.2
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp TATCTTCCTATTTCATTGAGGCATGTAGCCTCGTTCTaGCAGGGATCTGAAGCACATTCATCCACTTCCAAG +
Preference number: 6 (lower is better)
Translates to: YLPISLRHVASF*QGSEAHSSTSK
Trigger: CTTGGAAGTGGATGAATGTGCTTCAGATCCCTGCAAGAACGAGGCTACATGCCTCAATGAAATAGGAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 72 bp TTGCAGCTGTTGTCTCCAGCACAGCCTTGGGTTACATaGACAAGAACTGGATTGAGAGATGCATTGTTTGTT +
Preference number: 6 (lower is better)
Translates to: LQLLSPAQPWVT*TRTGLRDALFV
Trigger: AACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGACAACAGCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp ATACAAGTATATCTTCCTATTTCATTGAGGCATGTAGCCTCGTTCTaGCAGGGATCTGAAGCACATTCATCCACTTCCAAGTCGCAGTGT +
Preference number: 6 (lower is better)
Translates to: IQVYLPISLRHVASF*QGSEAHSSTSKSQC
Trigger: ACACTGCGACTTGGAAGTGGATGAATGTGCTTCAGATCCCTGCAAGAACGAGGCTACATGCCTCAATGAAATAGGAAGATATACTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CCA 72 bp GTCTCCAGCACAGCCTTGGGTTACATTGACAAGAACTaGATTGAGAGATGCATTGTTTGTTGGATTTGGAAA +
Preference number: 6 (lower is better)
Translates to: VSSTALGYIDKN*IERCIVCWIWK
Trigger: TTTCCAAATCCAACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGCTGTGCTGGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp CTTCGTGCCATGTGCCATCATTCACTGACTGCAAACTaGTCAGACTTAGCATATAAAAGCTGTTGCCACTTT +
Preference number: 6 (lower is better)
Translates to: LRAMCHHSLTAN*SDLAYKSCCHF
Trigger: AAAGTGGCAACAGCTTTTATATGCTAAGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACATGGCACGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp AAAGGGTCACTTCGTGCCATGTGCCATCATTCACTGACTGCAAACTaGTCAGACTTAGCATATAAAAGCTGTTGCCACTTTGCAATTGAA +
Preference number: 6 (lower is better)
Translates to: KGSLRAMCHHSLTAN*SDLAYKSCCHFAIE
Trigger: TTCAATTGCAAAGTGGCAACAGCTTTTATATGCTAAGTCTGACAAGTTTGCAGTCAGTGAATGATGGCACATGGCACGAAGTGACCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 90 bp AGCAGCAGAGTTTACACAGTACAGCTCTTCCTGCTAATACACCATTaGGTTAAAGCCATGGTCTGCCATAAAATACCAGAAAGTCAAGTC +
Preference number: 6 (lower is better)
Translates to: SSRVYTVQLFLLIHH*VKAMVCHKIPESQV
Trigger: GACTTGACTTTCTGGTATTTTATGGCAGACCATGGCTTTAACCAAATGGTGTATTAGCAGGAAGAGCTGTACTGTGTAAACTCTGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475659.1
CDS TCA 72 bp CAAATAAATATTCAGGACAATGGAACTACTCAGGAATaGAGACCAACCAGAGCAAGCTGGTACCACTCAGTA +
Preference number: 6 (lower is better)
Translates to: QINIQDNGTTQE*RPTRASWYHSV
Trigger: TACTGAGTGGTACCAGCTTGCTCTGGTTGGTCTTCATTCCTGAGTAGTTCCATTGTCCTGAATATTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448952.1
CDS CCA 72 bp AATGTCTTGGAGACAGCCTACAAACGAAGGTGTGGATaGCATATTATAGAAGTTAAGCAGAGCAACACCATT +
Preference number: 6 (lower is better)
Translates to: NVLETAYKRRCG*HIIEVKQSNTI
Trigger: AATGGTGTTGCTCTGCTTAACTTCTATAATATGCCATCCACACCTTCGTTTGTAGGCTGTCTCCAAGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 72 bp CCTTCCTCCATAAAAAGTTCTAGAAAGGTTATCAAATaGGCAATGGCAAGTATAATTCCCAGGCAAGTTCTC +
Preference number: 6 (lower is better)
Translates to: PSSIKSSRKVIK*AMASIIPRQVL
Trigger: GAGAACTTGCCTGGGAATTATACTTGCCATTGCCCATTTGATAACCTTTCTAGAACTTTTTATGGAGGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000476483.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp TTGGAGAAGCAAGGGTCTTTCATGTTGTCACAGTCTTaGTCCAAATTATTGGCTGTGTCTGAACAAGAACAA +
Preference number: 6 (lower is better)
Translates to: LEKQGSFMLSQS*SKLLAVSEQEQ
Trigger: TTGTTCTTGTTCAGACACAGCCAATAATTTGGACAAAGACTGTGACAACATGAAAGACCCTTGCTTCTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 72 bp GTTTACACAGTACAGCTCTTCCTGCTAATACACCATTaGGTTAAAGCCATGGTCTGCCATAAAATACCAGAA +
Preference number: 6 (lower is better)
Translates to: VYTVQLFLLIHH*VKAMVCHKIPE
Trigger: TTCTGGTATTTTATGGCAGACCATGGCTTTAACCAAATGGTGTATTAGCAGGAAGAGCTGTACTGTGTAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475659.1
CDS CAA 90 bp AATTCCAGATTTTGGTTGTTTAGTCTTACATCTTGGATACAGCCTTaGAAGAATCCACCATTAAGTTCAGTCTCTTGCTTGTCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: NSRFWLFSLTSWIQP*KNPPLSSVSCLSGR
Trigger: CCTACCTGACAAGCAAGAGACTGAACTTAATGGTGGATTCTTCAAAGGCTGTATCCAAGATGTAAGACTAAACAACCAAAATCTGGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS GCA 72 bp GCCTTGGGTTACATTGACAAGAACTGGATTGAGAGATaGATTGTTTGTTGGATTTGGAAAGAATTCCAGATT +
Preference number: 6 (lower is better)
Translates to: ALGYIDKNWIER*IVCWIWKEFQI
Trigger: AATCTGGAATTCTTTCCAAATCCAACAAACAATGCATCTCTCAATCCAGTTCTTGTCAATGTAACCCAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CCA 72 bp GGTCTTTCATGTTGTCACAGTCTTTGTCCAAATTATTaGCTGTGTCTGAACAAGAACAATCATTGTCTTTTG +
Preference number: 6 (lower is better)
Translates to: GLSCCHSLCPNY*LCLNKNNHCLL
Trigger: CAAAAGACAATGATTGTTCTTGTTCAGACACAGCCAATAATTTGGACAAAGACTGTGACAACATGAAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 72 bp GGGTCTTTCATGTTGTCACAGTCTTTGTCCAAATTATaGGCTGTGTCTGAACAAGAACAATCATTGTCTTTT +
Preference number: 6 (lower is better)
Translates to: GSFMLSQSLSKL*AVSEQEQSLSF
Trigger: AAAAGACAATGATTGTTCTTGTTCAGACACAGCCAATAATTTGGACAAAGACTGTGACAACATGAAAGACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000367399.6
ENST00000367400.8
ENST00000475659.1
ENST00000484075.5
ENST00000535699.5
ENST00000538660.5
ENST00000638467.1
CDS CAA 72 bp TTTTGGTTGTTTAGTCTTACATCTTGGATACAGCCTTaGAAGAATCCACCATTAAGTTCAGTCTCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: FWLFSLTSWIQP*KNPPLSSVSCL
Trigger: CAAGCAAGAGACTGAACTTAATGGTGGATTCTTCAAAGGCTGTATCCAAGATGTAAGACTAAACAACCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000367397.1
ENST00000367399.6
ENST00000367400.8
ENST00000484075.5
ENST00000535699.5
ENST00000638467.1
ENST00000681519.1
CDS CAA 72 bp GGTTTTCTCAGTGATATCAATGCAATTGTAGGTAAATaGCTAGCCATTAATGAATTGGGGAATGCCTCAATA +
Preference number: 6 (lower is better)
Translates to: GFLSDINAIVGK*LAINELGNASI
Trigger: TATTGAGGCATTCCCCAATTCATTAATGGCTAGCAATTTACCTACAATTGCATTGATATCACTGAGAAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475659.1
CDS CAA 72 bp AATGACTTTAGCTACAGAATCGTTGAGGAAGATTACTaGAGACTAGGTCATTTTTCCCAGTGTAAATATAAG +
Preference number: 6 (lower is better)
Translates to: NDFSYRIVEEDY*RLGHFSQCKYK
Trigger: CTTATATTTACACTGGGAAAAATGACCTAGTCTCAAGTAATCTTCCTCAACGATTCTGTAGCTAAAGTCATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475659.1