RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRACR2B (Homo sapiens)

Ensembl gene IDs: ENSG00000177685

Ensembl transcript IDs: ENST00000450448.5, ENST00000525077.2, ENST00000526531.1, ENST00000527089.5, ENST00000527763.5, ENST00000528315.1, ENST00000528542.6, ENST00000528694.1, ENST00000530183.1, ENST00000530688.5, ENST00000530737.2, ENST00000533803.1, ENST00000534191.1, ENST00000534606.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCATGACAAGCCTCCTGCAAGGGCAGCTTCTAGCTCATGGTCCGTaGGTCACTCGGGGCTGGTCACCGGGCACTGGGAAGGTGGCCAGA +
Preference number: 1 (lower is better)
Translates to: PMTSLLQGQLLAHGP*VTRGWSPGTGKVAR
Trigger: TCTGGCCACCTTCCCAGTGCCCGGTGACCAGCCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGCCCTTGCAGGAGGCTTGTCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
3UTR-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTGAGCCTTCCTGCAGCTaGTGCCCGCCCGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCEPSCS*CPPAWP
Trigger: AGGCCAGGCGGGCGGGCAGCAGCTGCAGGAAGGCTC...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
3UTR-3UTR GCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGAGCCTTCCTGCAGCTaGTGCCCGCCCGCCTGGCCT +
Preference number: 2 (lower is better)
Translates to: ESLHPEWAPPTHDKPPAREPSCS*CPPAWP
Trigger: AGGCCAGGCGGGCGGGCAGCAGCTGCAGGAAGGCTC...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
3UTR-3UTR CCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTTCAGTCAGGCGAGCCTaGGGCCCACTGGGGAGAGCC +
Preference number: 2 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCSVRRA*GPLGRA
Trigger: GGCTCTCCCCAGTGGGCCCCAGGCTCGCCTGACTGA...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
3UTR-3UTR CCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGCGGGCACTGGGAAGGTaGCCAGAGCCGCGTCTGGGG +
Preference number: 2 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWRALGR*PEPRLG
Trigger: CCCCAGACGCGGCTCTGGCCACCTTCCCAGTGCCCG...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
3UTR-3UTR TCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGGGAGAGCCTGCATCCTaGGTGGGCACCCCCGACCCA +
Preference number: 2 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWGEPAS*VGTPDP
Trigger: TGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCC...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
3UTR-3UTR TCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGGCACCCCCGACCCATaGCAAGCCTCCTGCAAGGGC +
Preference number: 2 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGGTPDP*QASCKG
Trigger: GCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCC...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
3UTR-3UTR TCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGAGAGCCTGCATCCTaGGTGGGCACCCCCGACCCA +
Preference number: 2 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSGEPAS*VGTPDP
Trigger: TGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCC...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
3UTR-3UTR CCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTTCTAGCTCATaGTCCGTGAGTCACTCGGGG +
Preference number: 2 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARAASSS*SVSHSG
Trigger: CCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
3UTR-3UTR CCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGAGCCTGCATCCTGAGTaGGCACCCCCGACCCATGAC +
Preference number: 2 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGSLHPE*APPTHD
Trigger: GTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCT...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
3UTR-3UTR CAA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCAGGCAGGCGGGCTGTaGTCAGAGCCTTCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCQAGGL*SEPSCS
Trigger: GCTGCAGGAAGGCTCTGACAACAGCCCGCCTGCCTG...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
3UTR CCA 72 bp GAGATGGGGTTGATTGAACGGGGACAGAGCGAAGACTaGCAGAGGGCACACACGGGACCCTGGCCACTCCCG +
Preference number: 3 (lower is better)
Translates to: EMGLIERGQSED*QRAHTGPWPLP
Trigger: CGGGAGTGGCCAGGGTCCCGTGTGTGCCCTCTGCCAGTCTTCGCTCTGTCCCCGTTCAATCAACCCCATCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
3UTR-3UTR CAA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGGCAGGCGGGCTGTaGTCAGAGCCTTCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLQAGGL*SEPSCS
Trigger: GCTGCAGGAAGGCTCTGACAACAGCCCGCCTGCCTG...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCAGAGAGCCCGCCGTaGCCTGCACGTCGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKPESPP*PARRAR
Trigger: GCGGGCTCGACGTGCAGGGCACGGCGGGCTCTCTGG...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGGGCCAGAGCCGCGTCTaGGGGGCCGAGCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKGQSRV*GAEPSN
Trigger: GTTGCTGGGCTCGGCCCCCCAGACGCGGCTCTGGCC...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCCACGTCTCTCCCGCTaGCGCAGGCCCGCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLPRLSR*RRPARS
Trigger: GGAACGCGCGGGCCTGCGGCAGCGGGAGAGACGTGG...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCCAGAGAGCCCGCCGTaGCCTGCACGTCGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCPESPP*PARRAR
Trigger: GCGGGCTCGACGTGCAGGGCACGGCGGGCTCTCTGG...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCGCACCTCCCTCTCGTaGTCGCTCTCGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLRTSLS*SLSRLR
Trigger: GCGGAGGCGCGAGAGCGAGCACGAGAGGGAGGTGCG...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTGGCGGGCGCCGGCTCTaGTCCCGAAGCTGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCGGRRL*SRSCSV
Trigger: GACGGAGCAGCTTCGGGAGCAGAGCCGGCGCCCGCC...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTGGCGGGCGCCGGCTCTaGTCCCGAAGCTGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAAGGRRL*SRSCSV
Trigger: GACGGAGCAGCTTCGGGAGCAGAGCCGGCGCCCGCC...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCCACGTCTCTCCCGCTaGCGCAGGCCCGCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGPRLSR*RRPARS
Trigger: GGAACGCGCGGGCCTGCGGCAGCGGGAGAGACGTGG...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAGAGCCTTCCTGCAGCTaGTGCCCGCCCGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPAEPSCS*CPPAWP
Trigger: AGGCCAGGCGGGCGGGCAGCAGCTGCAGGAAGGCTC...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGTGCTCTAACTCCCGCTaGCGCAGGCCCGCGCGTTCC +
Preference number: 4 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKCSNSR*RRPARS
Trigger: GGAACGCGCGGGCCTGCGGCAGCGGGAGTTAGAGCA...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGTCCAGCCTGCGGATCTaGTCCTGCGCCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKSSLRI*SCAPSS
Trigger: GCTGGAGGGGGCGCAGGAGCAGATCCGCAGGCTGGA...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR CCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTTGCTGCCCGCCCGCCTaGCCTCGCAGGCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCCCPPA*PRRRPC
Trigger: ACAGGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCA...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCGGGCACTGGGAAGGTaGCCAGAGCCGCGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLRALGR*PEPRLG
Trigger: CCCCAGACGCGGCTCTGGCCACCTTCCCAGTGCCCG...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAGGCACCCCCGACCCATaGCAAGCCTCCTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPAGTPDP*QASCKG
Trigger: GCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCC...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTGTCCTCACAGCCCGCTaGTTGCCCAGGACCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAAVLTAR*LPRTGA
Trigger: GGCCCCGGTCCTGGGCAAGCAGCGGGCTGTGAGGAC...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGTCCTCACAGCCCGCTaGTTGCCCAGGACCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARVLTAR*LPRTGA
Trigger: GGCCCCGGTCCTGGGCAAGCAGCGGGCTGTGAGGAC...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTGTCCTCACAGCCCGCTaGTTGCCCAGGACCGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCVLTAR*LPRTGA
Trigger: GGCCCCGGTCCTGGGCAAGCAGCGGGCTGTGAGGAC...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTGAGCCTTCCTGCAGCTaGTGCCCGCCCGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAAEPSCS*CPPAWP
Trigger: AGGCCAGGCGGGCGGGCAGCAGCTGCAGGAAGGCTC...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTTGCGCCCCCTCCAGCTaGGTTCGCAGCGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCCAPSS*VRSASC
Trigger: GCACGAGGCGCTGCGAACGCAGCTGGAGGGGGCGCA...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR CCA 90 bp CCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTGCTCGCGCTGCAGCCTaGCCCAGAGCGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: PTGESLHPEWAPPTHDKPARAAA*PRASSQ
Trigger: CTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGC...AGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp CCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTGGGTGCAAGTGTGTCTaGAGGCTCAGCCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PTGESLHPEWAPPTHDKPGCKCV*RLSRGP
Trigger: GGGCCCTCGGCTGAGCCTTCAGACACACTTGCACCC...AGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTCCAGCTGCTCTGGCGTaGGGGGCAGGTCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAAPAALA*GAGRSG
Trigger: TCCAGAGCGACCTGCCCCTCACGCCAGAGCAGCTGG...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCCAGCTGCTCTGGCGTaGGGGGCAGGTCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGPAALA*GAGRSG
Trigger: TCCAGAGCGACCTGCCCCTCACGCCAGAGCAGCTGG...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGCACCCCCGACCCATaGCAAGCCTCCTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQGTPDP*QASCKG
Trigger: GCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCC...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTGGCACCCCCGACCCATaGCAAGCCTCCTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCGTPDP*QASCKG
Trigger: GCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCC...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGGGAGAGCCTGCATCCTaGGTGGGCACCCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGGEPAS*VGTPDP
Trigger: TGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCC...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGGAGAGCCTGCATCCTaGGTGGGCACCCCCGACCCA +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARGEPAS*VGTPDP
Trigger: TGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCC...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCATCTCCTCGGGAGTCCTaGAGGGGTTCGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPASPRES*RGSLPG
Trigger: CCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGA...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCTCTCCTCGGGAGTCCTaGAGGGGTTCGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLSPRES*RGSLPG
Trigger: CCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGA...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCCAGAGAGCCCGCCGTaGCCTGCACGTCGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLPESPP*PARRAR
Trigger: GCGGGCTCGACGTGCAGGGCACGGCGGGCTCTCTGG...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACGGCGGGCGCCGGCTCTaGTCCCGAAGCTGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHGGRRL*SRSCSV
Trigger: GACGGAGCAGCTTCGGGAGCAGAGCCGGCGCCCGCC...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGCCTCCAGCTGCTCTaGCGTGAGGGGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPASLQLL*REGQVA
Trigger: AGCGACCTGCCCCTCACGCCAGAGCAGCTGGAGGCT...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GCAGCTTCTAGCTCATGGTCCGTGAGTCACTCGGGGCTGGTCACCGGGCACTGGCAGGGGTTCGCTCCCTaGGCTGACGCCACCCCCACA +
Preference number: 4 (lower is better)
Translates to: AASSSWSVSHSGLVTGHWQGFAP*ADATPT
Trigger: TGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTG...CCAGTGCCCGGTGACCAGCCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCAGGGGTTCGCTCCCTaGGCTGACGCCACCCCCACA +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCQGFAP*ADATPT
Trigger: TGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTG...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GCAGCTTCTAGCTCATGGTCCGTGAGTCACTCGGGGCTGGTCACCGGGCACTGGGCTCGCGCTGCAGCCTaGCCCAGAGCGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: AASSSWSVSHSGLVTGHWARAAA*PRASSQ
Trigger: CTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGC...CCAGTGCCCGGTGACCAGCCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS-3UTR CCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGTGCTGCCCGCCCGCCTaGCCTCGCAGGCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWCCPPA*PRRRPC
Trigger: ACAGGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCA...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTTGCTGCCCGCCCGCCTaGCCTCGCAGGCGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLCCPPA*PRRRPC
Trigger: ACAGGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCA...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTGGCCAGAGCCGCGTCTaGGGGGCCGAGCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLGQSRV*GAEPSN
Trigger: GTTGCTGGGCTCGGCCCCCCAGACGCGGCTCTGGCC...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGTGCGCCCGCCACAGCTaGGAGTTCTGGGCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARCARHS*EFWACA
Trigger: GGCACAGGCCCAGAACTCCCAGCTGTGGCGGGCGCA...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR TCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTGGGTGCAAGTGTGTCTaGAGGCTCAGCCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCGCKCV*RLSRGP
Trigger: GGGCCCTCGGCTGAGCCTTCAGACACACTTGCACCC...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAGTTCGCTCCCTGGGCTaGCGCCACCCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPAVRSLG*RHPHKH
Trigger: ATGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAAC...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCCTGTGGGTACTaGCCCAGTGGGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPARACGY*PSGSGI
Trigger: GATGCCAGACCCACTGGGGCAGTACCCACAGGCCCT...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCAGCCTGCTCCAGTATTaGAGCCCGCGGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLSLLQY*SPRPCR
Trigger: TCTGCAGGGCCGCGGGCTGCAATACTGGAGCAGGCT...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACCGCACCTCCCTCTCGTaGTCGCTCTCGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHRTSLS*SLSRLR
Trigger: GCGGAGGCGCGAGAGCGAGCACGAGAGGGAGGTGCG...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACGAGCCTTCCTGCAGCTaGTGCCCGCCCGCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHEPSCS*CPPAWP
Trigger: AGGCCAGGCGGGCGGGCAGCAGCTGCAGGAAGGCTC...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGCCACTGGGGAGAGCCTaGATCCTGAGTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARPLGRA*ILSGHP
Trigger: GGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTGCCTGGGCGTGCAGCTaGTGCTCTAACTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCAWACS*CSNSRC
Trigger: GCAGCGGGAGTTAGAGCAGCAGCTGCACGCCCAGGC...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGGGAGTTCTGGGCCTGTaGCTCCAGGTGCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGGVLGL*LQVLRS
Trigger: GCTGCGGAGCACCTGGAGGCACAGGCCCAGAACTCC...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTGCCCGCCCTCCGGCTTaGCGGCTAGACCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLARPPA*RLDLRS
Trigger: GGACCTCAGGTCTAGCCGGCAAGCCGGAGGGCGGGC...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGAGAGGCCAGGGCCATTaGCTCCAGGCCACGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKRGQGH*LQATLL
Trigger: CAACAACGTGGCCTGGAGGCAATGGCCCTGGCCTCT...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS-3UTR CCA 90 bp GCAGCTTCTAGCTCATGGTCCGTGAGTCACTCGGGGCTGGTCACCGGGCACTGGGGCATCTCAGGAGGCTaGAACCCAGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AASSSWSVSHSGLVTGHWGISGG*NPGGAA
Trigger: GGCAGCCCCTCCTGGGTTCCAGCCTCCTGAGATGCC...CCAGTGCCCGGTGACCAGCCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS-3UTR CCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGAGGGGCAGGTCGCTCTaGAGACCCTGCAGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGRGRSL*RPCRSC
Trigger: GCACGACCTGCAGGGTCTCCAGAGCGACCTGCCCCT...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGAGCCTCCAGCTGCTCTaGCGTGAGGGGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARSLQLL*REGQVA
Trigger: AGCGACCTGCCCCTCACGCCAGAGCAGCTGGAGGCT...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGGCCAGAGCCGCGTCTaGGGGGCCGAGCCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGGQSRV*GAEPSN
Trigger: GTTGCTGGGCTCGGCCCCCCAGACGCGGCTCTGGCC...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCGGGCACTGGGAAGGTaGCCAGAGCCGCGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLRALGR*PEPRLG
Trigger: CCCCAGACGCGGCTCTGGCCACCTTCCCAGTGCCCG...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp CCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTGCGACCACGTCTCGTTaGGTTTGCTCCTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: PTGESLHPEWAPPTHDKPATTSR*VCSWRP
Trigger: AGGCCGCCAGGAGCAAACCCAACGAGACGTGGTCGC...AGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR TCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTAGAACTCCCTGGCGGTaGGGAAGCCAGTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAARTPWR*GSQCEP
Trigger: GGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCT...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GCAGCTTCTAGCTCATGGTCCGTGAGTCACTCGGGGCTGGTCACCGGGCACTGGAGAACTCCCTGGCGGTaGGGAAGCCAGTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: AASSSWSVSHSGLVTGHWRTPWR*GSQCEP
Trigger: GGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCT...CCAGTGCCCGGTGACCAGCCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS-3UTR TCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTAGCTCATGGTCCGTaGGTCACTCGGGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLLAHGP*VTRGWS
Trigger: TGACCAGCCCCGAGTGACTCACGGACCATGAGCTAG...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCATGGGGTCCTGAAAGCTaGGAGGAGCAGGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPAWGPES*EEQAWG
Trigger: ACCCCAAGCCTGCTCCTCTCAGCTTTCAGGACCCCA...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp CCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTAGCCTGGCCTTCAGGTaGTGTGAAGCCAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PTGESLHPEWAPPTHDKPSLAFR*CEAKGG
Trigger: CCCTCCCTTGGCTTCACAGCACCTGAAGGCCAGGCT...AGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCAGCCTGGCCTTCAGGTaGTGTGAAGCCAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLSLAFR*CEAKGG
Trigger: CCCTCCCTTGGCTTCACAGCACCTGAAGGCCAGGCT...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGAGCCTGCTCCAGTATTaGAGCCCGCGGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGSLLQY*SPRPCR
Trigger: TCTGCAGGGCCGCGGGCTGCAATACTGGAGCAGGCT...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGAACACAGCCTCCAGCTaGTCTGGCGTGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGNTASS*SGVRGR
Trigger: CCTGCCCCTCACGCCAGAGCAGCTGGAGGCTGTGTT...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTAACACAGCCTCCAGCTaGTCTGGCGTGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAANTASS*SGVRGR
Trigger: CCTGCCCCTCACGCCAGAGCAGCTGGAGGCTGTGTT...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGCGCACCTCCCTCTCGTaGTCGCTCTCGCGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGRTSLS*SLSRLR
Trigger: GCGGAGGCGCGAGAGCGAGCACGAGAGGGAGGTGCG...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGCCTGTGCCTCCAGGTaGTCCGCAGCCTGGGCGTGC +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSACASR*SAAWAC
Trigger: GCACGCCCAGGCTGCGGAGCACCTGGAGGCACAGGC...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGTTCGCAGCGCCTCGTaGGCCCGCCACAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGVRSAS*ARHSWE
Trigger: CTCCCAGCTGTGGCGGGCGCACGAGGCGCTGCGAAC...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGCTCCTGGCGGCCTCGTaGTTCGCTCTCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWLLAAS*FALQPA
Trigger: CGCAGGCTGGAGAGCGAAGCACGAGGCCGCCAGGAG...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTACTGAGCCCACAGAGTaGAGGGGCAAGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCTEPTE*RGKVPA
Trigger: GGCTGGGACCTTGCCCCTGCACTCTGTGGGCTCAGT...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR CCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCATGGGTACTGCCCCAGTaGGTCTGGCATCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPAWVLPQ*VWHLRR
Trigger: CCTCCTGAGATGCCAGACCCACTGGGGCAGTACCCA...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp CCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTTGGGTACTGCCCCAGTaGGTCTGGCATCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PTGESLHPEWAPPTHDKPWVLPQ*VWHLRR
Trigger: CCTCCTGAGATGCCAGACCCACTGGGGCAGTACCCA...AGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGCAGCAGGTGGGAAGGTaGGCGGAAGGCAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARQQVGR*AEGKVG
Trigger: TCCCACCTTGCCTTCCGCCCACCTTCCCACCTGCTG...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTCAGCAGGTGGGAAGGTaGGCGGAAGGCAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAAQQVGR*AEGKVG
Trigger: TCCCACCTTGCCTTCCGCCCACCTTCCCACCTGCTG...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAACAGGGGGCCTCAGCCTaGCCTTCAGGTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQQGASA*PSGAVK
Trigger: CTTCACAGCACCTGAAGGCCAGGCTGAGGCCCCCTG...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACCAGGGGTTCGCTCCCTaGGCTGACGCCACCCCCACA +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHQGFAP*ADATPT
Trigger: TGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTG...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGGCTCGCGCTGCAGCCTaGCCCAGAGCGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWARAAA*PRASSQ
Trigger: CTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGC...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCACGGGCACTGGGAAGGTaGCCAGAGCCGCGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSRALGR*PEPRLG
Trigger: CCCCAGACGCGGCTCTGGCCACCTTCCCAGTGCCCG...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGAGCCTGCATCCTGAGTaGGCACCCCCGACCCATGAC +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGSLHPE*APPTHD
Trigger: GTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCT...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp CCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTGGACAGAGCGAAGACTaGCAGAGGGCACACACGGGA +
Preference number: 4 (lower is better)
Translates to: PTGESLHPEWAPPTHDKPGQSED*QRAHTG
Trigger: TCCCGTGTGTGCCCTCTGCCAGTCTTCGCTCTGTCC...AGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAATGGCCTGGGCCTGTGTaGCCCAGCCTCATGACAGCT +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQWPGPV*PSLMTA
Trigger: AGCTGTCATGAGGCTGGGCCACACAGGCCCAGGCCA...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR TCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTGGGTGCAAGTGTGTCTaGAGGCTCAGCCGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLGCKCV*RLSRGP
Trigger: GGGCCCTCGGCTGAGCCTTCAGACACACTTGCACCC...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCGTGAGGAAGCCAGTGTaGGCCCGGTCCAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLVRKPV*ARSRLS
Trigger: TGAAAGTCTGGACCGGGCTCACACTGGCTTCCTCAC...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTAGCTCATGGTCCGTaGGTCACTCGGGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCLAHGP*VTRGWS
Trigger: TGACCAGCCCCGAGTGACTCACGGACCATGAGCTAG...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGCTAGCTCATGGTCCGTaGGTCACTCGGGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARLAHGP*VTRGWS
Trigger: TGACCAGCCCCGAGTGACTCACGGACCATGAGCTAG...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGGAACTGAGATGGGGTTaGTTGAACGGGGACAGAGCG +
Preference number: 4 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKELRWG*LNGDRA
Trigger: CGCTCTGTCCCCGTTCAATCAACCCCATCTCAGTTC...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTGAACCCAGGAGGGGCTaGCAACTTCAGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAAEPRRG*QLQERR
Trigger: CCTCCTCTCCTGAAGTTGGCAGCCCCTCCTGGGTTC...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAAGCCTGGCCTTCAGGTaGTGTGAAGCCAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQSLAFR*CEAKGG
Trigger: CCCTCCCTTGGCTTCACAGCACCTGAAGGCCAGGCT...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAACAGCTCCTCAGCCTaGTCCAGTATTGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPANSSSA*SSIAAR
Trigger: GCGGGCTGCAATACTGGAGCAGGCTGAGGAGCTGTT...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGTCTCCTCGGGAGTCCTaGAGGGGTTCGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWSPRES*RGSLPG
Trigger: CCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGA...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCAGCTACGTCTCGTTGGGTTTaGTCCTGGCGGCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: LHPEWAPPTHDKPPARAATSRWV*SWRPRA
Trigger: AGCACGAGGCCGCCAGGAGCAAACCCAACGAGACGT...AGCTGCCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR CCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACGGCATCTCAGGAGGCTaGAACCCAGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHGISGG*NPGGAA
Trigger: GGCAGCCCCTCCTGGGTTCCAGCCTCCTGAGATGCC...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGCTGCCCCAGTGGGTCTaGCATCTCAGGAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARLPQWV*HLRRLE
Trigger: TTCCAGCCTCCTGAGATGCCAGACCCACTGGGGCAG...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTTGGGTACTGCCCCAGTaGGTCTGGCATCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCWVLPQ*VWHLRR
Trigger: CCTCCTGAGATGCCAGACCCACTGGGGCAGTACCCA...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACAGGGGCAGGTCGCTCTaGAGACCCTGCAGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHRGRSL*RPCRSC
Trigger: GCACGACCTGCAGGGTCTCCAGAGCGACCTGCCCCT...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTAGCCTCCAGCTGCTCTaGCGTGAGGGGCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLSLQLL*REGQVA
Trigger: AGCGACCTGCCCCTCACGCCAGAGCAGCTGGAGGCT...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGTGCTCCAGCACAGTGTaGAATCGCTCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKCSSTV*NRSSSS
Trigger: GGAAGAGGAGGAGCGATTCCACACTGTGCTGGAGCA...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGTCAGTCAGGCGAGCCTaGGGCCCACTGGGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGSVRRA*GPLGRA
Trigger: GGCTCTCCCCAGTGGGCCCCAGGCTCGCCTGACTGA...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGACAGAGCGAAGACTaGCAGAGGGCACACACGGGA +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQGQSED*QRAHTG
Trigger: TCCCGTGTGTGCCCTCTGCCAGTCTTCGCTCTGTCC...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGGGACAGAGCGAAGACTaGCAGAGGGCACACACGGGA +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGGQSED*QRAHTG
Trigger: TCCCGTGTGTGCCCTCTGCCAGTCTTCGCTCTGTCC...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACAGGTGCTCCGCAGCCTaGGCGTGCAGCTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHRCSAA*ACSCCS
Trigger: AGAGCAGCAGCTGCACGCCCAGGCTGCGGAGCACCT...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR TCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGGTTCGCTCCCTGGGCTaGCGCCACCCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWVRSLG*RHPHKH
Trigger: ATGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAAC...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTAGGGCCTGTGGGTACTaGCCCAGTGGGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLRACGY*PSGSGI
Trigger: GATGCCAGACCCACTGGGGCAGTACCCACAGGCCCT...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGAACAGCTCCTCAGCCTaGTCCAGTATTGCAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGNSSSA*SSIAAR
Trigger: GCGGGCTGCAATACTGGAGCAGGCTGAGGAGCTGTT...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGAACACAGCCTCCAGCTaGTCTGGCGTGAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWNTASS*SGVRGR
Trigger: CCTGCCCCTCACGCCAGAGCAGCTGGAGGCTGTGTT...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGAGCAGCTCCAGTTaGCGTAGCAGGCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLLSSSS*RSRLTF
Trigger: GAAAGTCAGCCTGCTACGGCAACTGGAGCTGCTCAG...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGCCACTGGGGAGAGCCTaGATCCTGAGTGGGCACCCC +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGPLGRA*ILSGHP
Trigger: GGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCATGGGCGTGCAGCTGCTaGTCTAACTCCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSWACSC*SNSRCR
Trigger: GCGGCAGCGGGAGTTAGAGCAGCAGCTGCACGCCCA...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGCTGCGGATCTGCTCCTaGGCCCCCTCCAGCTGCGTT +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGLRICS*APSSCV
Trigger: AACGCAGCTGGAGGGGGCGCAGGAGCAGATCCGCAG...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR GCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCGAGCCCCTCACACTCTaGAACTGGAGATCTGATCCC +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLEPLTL*NWRSDP
Trigger: GGGATCAGATCTCCAGTTGCAGAGTGTGAGGGGCTC...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR CCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGGCATCTCAGGAGGCTaGAACCCAGGAGGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGGISGG*NPGGAA
Trigger: GGCAGCCCCTCCTGGGTTCCAGCCTCCTGAGATGCC...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACCAGCAGGTGGGAAGGTaGGCGGAAGGCAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHQQVGR*AEGKVG
Trigger: TCCCACCTTGCCTTCCGCCCACCTTCCCACCTGCTG...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAAGGGGCAGGTCGCTCTaGAGACCCTGCAGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSRGRSL*RPCRSC
Trigger: GCACGACCTGCAGGGTCTCCAGAGCGACCTGCCCCT...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCACTTTCTGCATGTTCCTaGAGACGGCGACCACGTCTC +
Preference number: 4 (lower is better)
Translates to: GESLHPEWAPPTHDKPPALSACS*RRRPRL
Trigger: GAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAG...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGCAGCTTCTAGCTCATaGTCCGTGAGTCACTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQAASSS*SVSHSG
Trigger: CCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTAGCCTGCATCCTGAGTaGGCACCCCCGACCCATGAC +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLSLHPE*APPTHD
Trigger: GTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCT...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGCAAGTCCTTAGCCCCTaGCCTGGGCCTGTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGQVLSP*PGPVWP
Trigger: GGGCCACACAGGCCCAGGCCAGGGGCTAAGGACTTG...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR CCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCAAAGAGGGCAAGTCTaGGCGGGTGAGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCQRGQV*AGERRG
Trigger: TCCCCTTCTCTCACCCGCCCAGACTTGCCCTCTTTG...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS-3UTR TCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGAGAACTCCCTGGCGGTaGGGAAGCCAGTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGRTPWR*GSQCEP
Trigger: GGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCT...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp GAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGAACTGAGATGGGGTTaGTTGAACGGGGACAGAGCG +
Preference number: 4 (lower is better)
Translates to: ESLHPEWAPPTHDKPPARELRWG*LNGDRA
Trigger: CGCTCTGTCCCCGTTCAATCAACCCCATCTCAGTTC...CCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACGAACCCAGGAGGGGCTaGCAACTTCAGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHEPRRG*QLQERR
Trigger: CCTCCTCTCCTGAAGTTGGCAGCCCCTCCTGGGTTC...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAAGCCTGCTCCAGTATTaGAGCCCGCGGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSSLLQY*SPRPCR
Trigger: TCTGCAGGGCCGCGGGCTGCAATACTGGAGCAGGCT...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAACTGAGCAGCTCCAGTTaGCGTAGCAGGCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQLSSSS*RSRLTF
Trigger: GAAAGTCAGCCTGCTACGGCAACTGGAGCTGCTCAG...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTGAGCAGCTCCAGTTaGCGTAGCAGGCTGACTTTC +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCLSSSS*RSRLTF
Trigger: GAAAGTCAGCCTGCTACGGCAACTGGAGCTGCTCAG...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCTGCCCCAGTGGGTCTaGCATCTCAGGAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLLPQWV*HLRRLE
Trigger: TTCCAGCCTCCTGAGATGCCAGACCCACTGGGGCAG...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGCAGGGGGCCTCAGCCTaGCCTTCAGGTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGQGASA*PSGAVK
Trigger: CTTCACAGCACCTGAAGGCCAGGCTGAGGCCCCCTG...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCACAGGGGGCCTCAGCCTaGCCTTCAGGTGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSQGASA*PSGAVK
Trigger: CTTCACAGCACCTGAAGGCCAGGCTGAGGCCCCCTG...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAACTTTCTGCATGTTCCTaGAGACGGCGACCACGTCTC +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQLSACS*RRRPRL
Trigger: GAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAG...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp AGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAGGGCTTTCTGCATGTTCCTaGAGACGGCGACCACGTCTC +
Preference number: 4 (lower is better)
Translates to: RACILSGHPRPMTSLLQGLSACS*RRRPRL
Trigger: GAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAG...CCCTTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAAGCCTGCATCCTGAGTaGGCACCCCCGACCCATGAC +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSSLHPE*APPTHD
Trigger: GTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCT...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTGTGAGGAAGCCAGTGTaGGCCCGGTCCAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLVRKPV*ARSRLS
Trigger: TGAAAGTCTGGACCGGGCTCACACTGGCTTCCTCAC...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCGTTGCCGTAGCAGGCTaGCTTTCTCTTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLVAVAG*LSLSAC
Trigger: ACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAAC...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGAACCCAGGAGGGGCTaGCAACTTCAGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSEPRRG*QLQERR
Trigger: CCTCCTCTCCTGAAGTTGGCAGCCCCTCCTGGGTTC...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTAGACCCTGCAGGTCGTaGTTGGTGATGAAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCRPCRS*LVMKPL
Trigger: TAAGGGCTTCATCACCAAGCACGACCTGCAGGGTCT...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCG +
Preference number: 4 (lower is better)
Translates to: PLGRACILSGHPRPMTSLLTFSF*MFLETA
Trigger: CGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAG...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACCAGGAGGGGAGCGGATaGGGTGCAAGTGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHQEGSG*GASVSE
Trigger: TTCAGACACACTTGCACCCCATCCGCTCCCCTCCTG...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTGCAGCTTCTAGCTCATaGTCCGTGAGTCACTCGGGG +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLAASSS*SVSHSG
Trigger: CCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTGAACTGAGATGGGGTTaGTTGAACGGGGACAGAGCG +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLELRWG*LNGDRA
Trigger: CGCTCTGTCCCCGTTCAATCAACCCCATCTCAGTTC...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGCAGGAGGGGAGCGGATaGGGTGCAAGTGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGQEGSG*GASVSE
Trigger: TTCAGACACACTTGCACCCCATCCGCTCCCCTCCTG...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCACAGGAGGGGAGCGGATaGGGTGCAAGTGTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSQEGSG*GASVSE
Trigger: TTCAGACACACTTGCACCCCATCCGCTCCCCTCCTG...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTTGCTCCAGCACAGTGTaGAATCGCTCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLCSSTV*NRSSSS
Trigger: GGAAGAGGAGGAGCGATTCCACACTGTGCTGGAGCA...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGCTCCAGCACAGTGTaGAATCGCTCCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHCSSTV*NRSSSS
Trigger: GGAAGAGGAGGAGCGATTCCACACTGTGCTGGAGCA...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCAGCTTCTAGCTCATaGTCCGTGAGTCACTCGGGG +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGAASSS*SVSHSG
Trigger: CCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CCA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAAATCTCAGGGGCCAGTaGAGAAGACCTGGTGATAAG +
Preference number: 4 (lower is better)
Translates to: GRACILSGHPRPMTSLLQNLRGQ*RRPGDK
Trigger: CTTATCACCAGGTCTTCTCCACTGGCCCCTGAGATT...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS-3UTR TCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGGTTGCCGTAGCAGGCTaGCTTTCTCTTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWVAVAG*LSLSAC
Trigger: ACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAAC...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGAGACCCTGCAGGTCGTaGTTGGTGATGAAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGRPCRS*LVMKPL
Trigger: TAAGGGCTTCATCACCAAGCACGACCTGCAGGGTCT...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAAGACCCTGCAGGTCGTaGTTGGTGATGAAGCCCTTA +
Preference number: 4 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSRPCRS*LVMKPL
Trigger: TAAGGGCTTCATCACCAAGCACGACCTGCAGGGTCT...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCG +
Preference number: 4 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWLTFSF*MFLETA
Trigger: CGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAG...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR TCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGTTGCCGTAGCAGGCTaGCTTTCTCTTTCTGCATGT +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGVAVAG*LSLSAC
Trigger: ACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAAC...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR GCA 90 bp ACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCG +
Preference number: 4 (lower is better)
Translates to: TLTTPRLGPSCLQSGEPGLTFSF*MFLETA
Trigger: CGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAG...CCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS GCA 90 bp GGGCGCTCGCGCTGCAGCCTGGCCCAGAGCGTCCTCACAGCCCGCTaGCTGGAGGGCGGGCGGGAATTGCCCAGGACCGGGGCCACCCCC +
Preference number: 5 (lower is better)
Translates to: GRSRCSLAQSVLTAR*LEGGRELPRTGATP
Trigger: GGGGGTGGCCCCGGTCCTGGGCAATTCCCGCCCGCCCTCCAGGCAGCGGGCTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGCGCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530688.5
CDS GCA 90 bp TCCCGCTGCCGCAGGCCCGCGCGTTCCAGGTCCTGCTCGCGGCTCTaGAGCTCCAGCTCCAGACGGCTTCTCCGCTCCCCGCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SRCRRPARSRSCSRL*SSSSRRLLRSPRAK
Trigger: CTTCGCCCGCGGGGAGCGGAGAAGCCGTCTGGAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGCGGGCCTGCGGCAGCGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528542.6
ENST00000528694.1
ENST00000530688.5
CDS CCA 90 bp GCCCCCTCCAGCTGCGTTCGCAGCGCCTCGTGCGCCCGCCACAGCTaGGAGTTCTGGGCCTGTGCCTCCAGGTGCTCCGCAGCCTGGGCG +
Preference number: 5 (lower is better)
Translates to: APSSCVRSASCARHS*EFWACASRCSAAWA
Trigger: CGCCCAGGCTGCGGAGCACCTGGAGGCACAGGCCCAGAACTCCCAGCTGTGGCGGGCGCACGAGGCGCTGCGAACGCAGCTGGAGGGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS CCA 90 bp CATCCTCGAAAGAGCCCAGCAGCTCGGGGCGCTCGCGCTGCAGCCTaGCCCAGAGCGTCCTCACAGCCCGCTGCCTGGAGGGCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: HPRKSPAARGARAAA*PRASSQPAAWRAGG
Trigger: CCCGCCCGCCCTCCAGGCAGCGGGCTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGCGCCCCGAGCTGCTGGGCTCTTTCGAGGATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS GCA 90 bp CGACCACGTCTCTCCCGCTGCCGCAGGCCCGCGCGTTCCAGGTCCTaGTCGCGGCTCTGCAGCTCCAGCTCCAGACGGCTTCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: RPRLSRCRRPARSRS*SRLCSSSSRRLLRS
Trigger: GGAGCGGAGAAGCCGTCTGGAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGCGGGCCTGCGGCAGCGGGAGAGACGTGGTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS GCA 90 bp AGGTGGGCCCAGGCAGGCGGGCTGTTGTCAGAGCCTTCCTGCAGCTaGTGCCCGCCCGCCTGGCCTCGCAGGCGTCCCTGTCATCCCGCA +
Preference number: 5 (lower is better)
Translates to: RWAQAGGLLSEPSCS*CPPAWPRRRPCHPA
Trigger: TGCGGGATGACAGGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCAGCTGCAGGAAGGCTCTGACAACAGCCCGCCTGCCTGGGCCCACCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528542.6
ENST00000528694.1
ENST00000530688.5
CDS GCA 90 bp TGGGACGCACGGAGGACCACTGAGCCTCCGCCGGCCGCTCGGCCATaGAAAAGAGGTACACGGAGGGCCAGGGGCTGGGAGTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: WDARRTTEPPPAARP*KRGTRRARGWEWAR
Trigger: CCGGGCCCACTCCCAGCCCCTGGCCCTCCGTGTACCTCTTTTGCATGGCCGAGCGGCCGGCGGAGGCTCAGTGGTCCTCCGTGCGTCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
CDS CCA 90 bp CATCCTCGAAAGAGCCCAGCAGCTCGGGGCGCTCGCGCTGCAGCCTaGCCCAGAGCGTCCTCACAGCCCGCTGCTTGCCCAGGACCGGGG +
Preference number: 5 (lower is better)
Translates to: HPRKSPAARGARAAA*PRASSQPAACPGPG
Trigger: CCCCGGTCCTGGGCAAGCAGCGGGCTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGCGCCCCGAGCTGCTGGGCTCTTTCGAGGATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527763.5
ENST00000528542.6
CDS CCA 90 bp AGCTCCAGCTCCAGACGGCTTCTCCGCTCCCCGCGGGCGAAGTTCTaGGACGCACGGAGGACCACTGAGCCTCCGCCGGCCGCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: SSSSRRLLRSPRAKF*DARRTTEPPPAARP
Trigger: TGGCCGAGCGGCCGGCGGAGGCTCAGTGGTCCTCCGTGCGTCCCAGAACTTCGCCCGCGGGGAGCGGAGAAGCCGTCTGGAGCTGGAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
CDS GCA 90 bp AGCAGCAGGTGGGCCCAGGCAGGCGGGCTGTTGTCAGAGCCTTCCTaGAGCTGCTGCCCGCCCGCCTGGCCTCGCAGGCGTCCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: SSRWAQAGGLLSEPS*SCCPPAWPRRRPCH
Trigger: ATGACAGGGACGCCTGCGAGGCCAGGCGGGCGGGCAGCAGCTGCAGGAAGGCTCTGACAACAGCCCGCCTGCCTGGGCCCACCTGCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528542.6
ENST00000528694.1
ENST00000530688.5
CDS GCA 90 bp GCTTCGCTCTCCAGCCTGCGGATCTGCTCCTGCGCCCCCTCCAGCTaGGTTCGCAGCGCCTCGTGCGCCCGCCACAGCTGGGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: ASLSSLRICSCAPSS*VRSASCARHSWEFW
Trigger: CCAGAACTCCCAGCTGTGGCGGGCGCACGAGGCGCTGCGAACGCAGCTGGAGGGGGCGCAGGAGCAGATCCGCAGGCTGGAGAGCGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 90 bp GTTTGCTCCTGGCGGCCTCGTGCTTCGCTCTCCAGCCTGCGGATCTaGTCCTGCGCCCCCTCCAGCTGCGTTCGCAGCGCCTCGTGCGCC +
Preference number: 5 (lower is better)
Translates to: VCSWRPRASLSSLRI*SCAPSSCVRSASCA
Trigger: GGCGCACGAGGCGCTGCGAACGCAGCTGGAGGGGGCGCAGGAGCAGATCCGCAGGCTGGAGAGCGAAGCACGAGGCCGCCAGGAGCAAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 90 bp CAGCCCCGTCCCACGGCACCGTTGGGTTTGCTCCTGGCGGCCTCGTaGTTCGCTCTCCAGCCTGCGGATCTGCTCCTGCGCCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: QPRPTAPLGLLLAAS*FALQPADLLLRPLQ
Trigger: CTGGAGGGGGCGCAGGAGCAGATCCGCAGGCTGGAGAGCGAAGCACGAGGCCGCCAGGAGCAAACCCAACGGTGCCGTGGGACGGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS CCA 90 bp GGGTCGGGTGGAGAAGACCGGACGGGGGTGATACGTGAGGCCCAGTaGGATCTCCTCGGGCTGAGGGCAGCCTGGACCCGCGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: GSGGEDRTGVIREAQ*DLLGLRAAWTRGGG
Trigger: CCCACCTCCGCGGGTCCAGGCTGCCCTCAGCCCGAGGAGATCCCACTGGGCCTCACGTATCACCCCCGTCCGGTCTTCTCCACCCGACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527763.5
ENST00000528694.1
CDS-3UTR CAA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCTCACAGCCCGCTGCTaGCCCAGGACCGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKLTARC*PRTGAT
Trigger: GGTGGCCCCGGTCCTGGGCAAGCAGCGGGCTGTGAG...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CAA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCGCCCGCCCTCCGGCTaGCCGGCTAGACCTGAGGTC +
Preference number: 5 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKRPPSG*PARPEV
Trigger: GACCTCAGGTCTAGCCGGCAAGCCGGAGGGCGGGCG...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS GCA 90 bp TGCTGCTCTAACTCCCGCTGCCGCAGGCCCGCGCGTTCCAGGTCCTaGTCGCGGCTCTGCAGCTCCAGCTCCAGACGGCTTCTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: CCSNSRCRRPARSRS*SRLCSSSSRRLLRS
Trigger: GGAGCGGAGAAGCCGTCTGGAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGCGGGCCTGCGGCAGCGGGAGTTAGAGCAGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
CDS GCA 90 bp TCGTGCGCCCGCCACAGCTGGGAGTTCTGGGCCTGTGCCTCCAGGTaGTCCGCAGCCTGGGCGTGCAGCTGCTGCTCTAACTCCCGCTGC +
Preference number: 5 (lower is better)
Translates to: SCARHSWEFWACASR*SAAWACSCCSNSRC
Trigger: GCAGCGGGAGTTAGAGCAGCAGCTGCACGCCCAGGCTGCGGAGCACCTGGAGGCACAGGCCCAGAACTCCCAGCTGTGGCGGGCGCACGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
CDS CCA 90 bp CAGGGCATCCCTCCCGTGAGCGCTTTCGCCCCTGCCCGGCGTGCGTaGTCGGTGAGGTGTGTGTACCCTGGGCAGTGCCGGTATGTGGCC +
Preference number: 5 (lower is better)
Translates to: QGIPPVSAFAPARRA*SVRCVYPGQCRYVA
Trigger: GGCCACATACCGGCACTGCCCAGGGTACACACACCTCACCGACCACGCACGCCGGGCAGGGGCGAAAGCGCTCACGGGAGGGATGCCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 90 bp GGAGACGGCGACCACGTCTCGTTGGGTTTGCTCCTGGCGGCCTCGTaGTTCGCTCTCCAGCCTGCGGATCTGCTCCTGCGCCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GDGDHVSLGLLLAAS*FALQPADLLLRPLQ
Trigger: CTGGAGGGGGCGCAGGAGCAGATCCGCAGGCTGGAGAGCGAAGCACGAGGCCGCCAGGAGCAAACCCAACGAGACGTGGTCGCCGTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525077.2
ENST00000526531.1
CDS GCA 90 bp CGTGCAGGGCATCCCTCCCGTGAGCGCTTTCGCCCCTGCCCGGCGTaGGTGGTCGGTGAGGTGTGTGTACCCTGGGCAGTGCCGGTATGT +
Preference number: 5 (lower is better)
Translates to: RAGHPSRERFRPCPA*VVGEVCVPWAVPVC
Trigger: ACATACCGGCACTGCCCAGGGTACACACACCTCACCGACCACGCACGCCGGGCAGGGGCGAAAGCGCTCACGGGAGGGATGCCCTGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 90 bp ATCAGAACATCCTCGAAAGAGCCCAGCAGCTCGGGGCGCTCGCGCTaGAGCCTGGCCCAGAGCGTCCTCACAGCCCGCTGCCTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: IRTSSKEPSSSGRSR*SLAQSVLTARCLEG
Trigger: GCCCTCCAGGCAGCGGGCTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGCGCCCCGAGCTGCTGGGCTCTTTCGAGGATGTTCTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS GCA 90 bp TCGTGCGCCCGCCACAGCTGGGAGTTCTGGGCCTGTGCCTCCAGGTaGTCCGCAGCCTGGGCGTGCAGCTGCTGCTCTAACTGGAGGGTG +
Preference number: 5 (lower is better)
Translates to: SCARHSWEFWACASR*SAAWACSCCSNWRV
Trigger: CACCCTCCAGTTAGAGCAGCAGCTGCACGCCCAGGCTGCGGAGCACCTGGAGGCACAGGCCCAGAACTCCCAGCTGTGGCGGGCGCACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS CCA 90 bp CCAGTGGGATCTCCTCGGGCTGAGGGCAGCCTGGACCCGCGGAGGTaGGGCCGTCGGGGAGGGATTAATTCAGAGAAGGCGGAGCCAGGG +
Preference number: 5 (lower is better)
Translates to: PVGSPRAEGSLDPRR*GRRGGINSEKAEPG
Trigger: CCCTGGCTCCGCCTTCTCTGAATTAATCCCTCCCCGACGGCCCCACCTCCGCGGGTCCAGGCTGCCCTCAGCCCGAGGAGATCCCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527763.5
ENST00000528694.1
CDS-3UTR CAA 90 bp GGGCCCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGTGCCTCCAGGCCACGTaGTTGTCTCGCCCGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GPTGESLHPEWAPPTHDKCLQAT*LSRPPS
Trigger: GGAGGGCGGGCGAGACAACAACGTGGCCTGGAGGCA...CTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS GCA 90 bp ATCAGAACATCCTCGAAAGAGCCCAGCAGCTCGGGGCGCTCGCGCTaGAGCCTGGCCCAGAGCGTCCTCACAGCCCGCTGCTTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: IRTSSKEPSSSGRSR*SLAQSVLTARCLPR
Trigger: CCTGGGCAAGCAGCGGGCTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGCGCCCCGAGCTGCTGGGCTCTTTCGAGGATGTTCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527763.5
ENST00000528542.6
CDS GCA 90 bp CCCTTAGGAGACTTCTTCGCCCCTGGGCAGGACAGGAGCACTTGCTaGGTGCAGGGCATCCCTCCCGTGAGCGCTTTCGCCCCTGCCCGG +
Preference number: 5 (lower is better)
Translates to: PLGDFFAPGQDRSTC*VQGIPPVSAFAPAR
Trigger: CCGGGCAGGGGCGAAAGCGCTCACGGGAGGGATGCCCTGCACGCAGCAAGTGCTCCTGTCCTGCCCAGGGGCGAAGAAGTCTCCTAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 90 bp TGGGCCTGTGCCTCCAGGTGCTCCGCAGCCTGGGCGTGCAGCTGCTaGTCTAACTGGAGGGTGGAAGGATGGAGACCGGCGAGGAACGCC +
Preference number: 5 (lower is better)
Translates to: WACASRCSAAWACSC*SNWRVEGWRPARNA
Trigger: GGCGTTCCTCGCCGGTCTCCATCCTTCCACCCTCCAGTTAGAGCAGCAGCTGCACGCCCAGGCTGCGGAGCACCTGGAGGCACAGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS CCA 90 bp ACAAGGGCAGACAGCATGCAGGCAGAGAAACAGCAGAGCGGGCAGTaGGAGCGGGGCCAGCGCCGACTCACTTGCCCAGGACCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: TRADSMQAEKQQSGQ*ERGQRRLTCPGPGP
Trigger: TGGCCCCGGTCCTGGGCAAGTGAGTCGGCGCTGGCCCCGCTCCCACTGCCCGCTCTGCTGTTTCTCTGCCTGCATGCTGTCTGCCCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS-3UTR CAA 90 bp CCACTGGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCGGCGACCACGTCTCGTaGGGTTTGCTCCTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PLGRACILSGHPRPMTSLGDHVS*GLLLAA
Trigger: GGCCGCCAGGAGCAAACCCAACGAGACGTGGTCGCC...GAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCCAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS TCA 90 bp TGCCGGGTCCCTCCCAGGGAATCGCAGCTGACGCTAGGCTGGGCCTaGCCCGGCCTAGAGACCCTGTGCAGAACCAGCACTCGGGTGACA +
Preference number: 5 (lower is better)
Translates to: CRVPPRESQLTLGWA*PGLETLCRTSTRVT
Trigger: TGTCACCCGAGTGCTGGTTCTGCACAGGGTCTCTAGGCCGGGTCAGGCCCAGCCTAGCGTCAGCTGCGATTCCCTGGGAGGGACCCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS CCA 90 bp CCCGACTCAAAGGTCTCCTCGGGAGTCCTGCAGGGGTTCGCTCCCTaGGCTGACGCCACCCCCACAAACATCCCTGCGGGCATGGAGCGA +
Preference number: 5 (lower is better)
Translates to: PDSKVSSGVLQGFAP*ADATPTNIPAGMER
Trigger: TCGCTCCATGCCCGCAGGGATGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGACCTTTGAGTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS TCA 90 bp CTCAAAGGTCTCCTCGGGAGTCCTGCAGGGGTTCGCTCCCTGGGCTaGCGCCACCCCCACAAACATCCCTGCGGGCATGGAGCGAGCGAT +
Preference number: 5 (lower is better)
Translates to: LKGLLGSPAGVRSLG*RHPHKHPCGHGASD
Trigger: ATCGCTCGCTCCATGCCCGCAGGGATGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGACCTTTGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 90 bp TTCTGGGCCTGTGCCTCCAGGTGCTCCGCAGCCTGGGCGTGCAGCTaGTGCTCTAACTGGAGGGTGGAAGGATGGAGACCGGCGAGGAAC +
Preference number: 5 (lower is better)
Translates to: FWACASRCSAAWACS*CSNWRVEGWRPARN
Trigger: GTTCCTCGCCGGTCTCCATCCTTCCACCCTCCAGTTAGAGCAGCAGCTGCACGCCCAGGCTGCGGAGCACCTGGAGGCACAGGCCCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS CCA 90 bp GTGATACGTGAGGCCCAGTGGGATCTCCTCGGGCTGAGGGCAGCCTaGACCCGCGGAGGTGGGGCCGTCGGGGAGGGATTAATTCAGAGA +
Preference number: 5 (lower is better)
Translates to: VIREAQWDLLGLRAA*TRGGGAVGEGLIQR
Trigger: TCTCTGAATTAATCCCTCCCCGACGGCCCCACCTCCGCGGGTCCAGGCTGCCCTCAGCCCGAGGAGATCCCACTGGGCCTCACGTATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527763.5
ENST00000528694.1
CDS-3UTR CAA 90 bp GGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAACACGTCTCGTTGGGTTaGCTCCTGGCGGCCTCGTGC +
Preference number: 5 (lower is better)
Translates to: GRACILSGHPRPMTSLLQHVSLG*LLAASC
Trigger: GCACGAGGCCGCCAGGAGCAAACCCAACGAGACGTG...TTGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS TCA 90 bp GGCAGGCCACAGGCTCACCCAGGCCCAGGCAGAACTCCCTGGCGGTaGGGAAGCCAGTGTGAGCCCGGTCCAGACTTTCAAACACAGCCT +
Preference number: 5 (lower is better)
Translates to: GRPQAHPGPGRTPWR*GSQCEPGPDFQTQP
Trigger: AGGCTGTGTTTGAAAGTCTGGACCGGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCTGCCTGGGCCTGGGTGAGCCTGTGGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530737.2
ENST00000534191.1
ENST00000534606.1
CDS GCA 90 bp AAACCCTTAGGAGACTTCTTCGCCCCTGGGCAGGACAGGAGCACTTaGTGCGTGCAGGGCATCCCTCCCGTGAGCGCTTTCGCCCCTGCC +
Preference number: 5 (lower is better)
Translates to: KPLGDFFAPGQDRST*CVQGIPPVSAFAPA
Trigger: GGCAGGGGCGAAAGCGCTCACGGGAGGGATGCCCTGCACGCAGCAAGTGCTCCTGTCCTGCCCAGGGGCGAAGAAGTCTCCTAAGGGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS CCA 90 bp AGGGCCTGTGGGTACTGCCCCAGTGGGTCTGGCATCTCAGGAGGCTaGAACCCAGGAGGGGCTGCCAACTTCAGGAGAGGAGGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: RACGYCPSGSGISGG*NPGGAANFRRGGAG
Trigger: TCCAGCTCCTCCTCTCCTGAAGTTGGCAGCCCCTCCTGGGTTCCAGCCTCCTGAGATGCCAGACCCACTGGGGCAGTACCCACAGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528315.1
ENST00000528542.6
ENST00000530183.1
ENST00000533803.1
ENST00000534191.1
CDS CCA 90 bp CACAGCTGGGAGTTCTGGGCCTGTGCCTCCAGGTGCTCCGCAGCCTaGGCGTGCAGCTGCTGCTCTAACTGGAGGGTGGAAGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: HSWEFWACASRCSAA*ACSCCSNWRVEGWR
Trigger: TCTCCATCCTTCCACCCTCCAGTTAGAGCAGCAGCTGCACGCCCAGGCTGCGGAGCACCTGGAGGCACAGGCCCAGAACTCCCAGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS CCA 90 bp CCCGACTCAAAGGTCTCCTCGGGAGTCCTGCAGGGGTTCGCTCCCTaGGCTGACGCCACCCCCACAAACATCCCGGAGCTTAGCACAGGA +
Preference number: 5 (lower is better)
Translates to: PDSKVSSGVLQGFAP*ADATPTNIPELSTG
Trigger: TCCTGTGCTAAGCTCCGGGATGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGACCTTTGAGTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530737.2
CDS-3UTR CAA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCACTCCAGGCCACGTTGTaGTCTCGCCCGCCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSLQATL*SRPPSG
Trigger: GCCGGAGGGCGGGCGAGACAACAACGTGGCCTGGAG...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS GCA 90 bp CCAGGGCTGGCCATGAGAGCAGGGGGCCTCAGCCTGGCCTTCAGGTaGTGTGAAGCCAAGGGAGGGTCAGAAGAAATTCAGGAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: PGLAMRAGGLSLAFR*CEAKGGSEEIQEGS
Trigger: GCTCCCCTCCTGAATTTCTTCTGACCCTCCCTTGGCTTCACAGCACCTGAAGGCCAGGCTGAGGCCCCCTGCTCTCATGGCCAGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528315.1
ENST00000528542.6
ENST00000530183.1
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
CDS-3UTR CAA 90 bp GCAGCTTCTAGCTCATGGTCCGTGAGTCACTCGGGGCTGGTCACCGGGCACTGGCCCTGCAGGTCGTGCTaGGTGATGAAGCCCTTAGCC +
Preference number: 5 (lower is better)
Translates to: AASSSWSVSHSGLVTGHWPCRSC*VMKPLA
Trigger: GGCTAAGGGCTTCATCACCAAGCACGACCTGCAGGG...CCAGTGCCCGGTGACCAGCCCCGAGTGACTCACGGACCATGAGCTAGAAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS-3UTR CAA 90 bp GGGACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCCCTGCAGGTCGTGCTaGGTGATGAAGCCCTTAGCC +
Preference number: 5 (lower is better)
Translates to: GTLATPGTLTTPRLGPSCPCRSC*VMKPLA
Trigger: GGCTAAGGGCTTCATCACCAAGCACGACCTGCAGGG...ACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CAA 90 bp ACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACCAGGCAGGCGGGCTGTaGTCAGAGCCTTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TTPRLGPSCLQSGEPGAHQAGGL*SEPSCS
Trigger: GCTGCAGGAAGGCTCTGACAACAGCCCGCCTGCCTG...GTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS TCA 90 bp GTCAGAAGAAATTCAGGAGGGGAGCGGATGGGGTGCAAGTGTGTCTaGAGGCTCAGCCGAGGGCCCTCCCTGCAGCAGGTGGGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: VRRNSGGERMGCKCV*RLSRGPSLQQVGRW
Trigger: CCACCTTCCCACCTGCTGCAGGGAGGGCCCTCGGCTGAGCCTTCAGACACACTTGCACCCCATCCGCTCCCCTCCTGAATTTCTTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528315.1
ENST00000528542.6
ENST00000530183.1
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
CDS TCA 90 bp GCTGGCCATGAGAGCAGGGGGCCTCAGCCTGGCCTTCAGGTGCTGTaGAGCCAAGGGAGGGTCAGAAGAAATTCAGGAGGGGAGCGGATG +
Preference number: 5 (lower is better)
Translates to: AGHESRGPQPGLQVL*SQGRVRRNSGGERM
Trigger: CATCCGCTCCCCTCCTGAATTTCTTCTGACCCTCCCTTGGCTTCACAGCACCTGAAGGCCAGGCTGAGGCCCCCTGCTCTCATGGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528315.1
ENST00000528542.6
ENST00000530183.1
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
CDS TCA 90 bp CCACCCCCACAAACATCCCCAGGCCCAGGCAGAACTCCCTGGCGGTaGGGAAGCCAGTGTGAGCCCGGTCCAGACTTTCAAACACAGCCT +
Preference number: 5 (lower is better)
Translates to: PPPQTSPGPGRTPWR*GSQCEPGPDFQTQP
Trigger: AGGCTGTGTTTGAAAGTCTGGACCGGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCTGCCTGGGCCTGGGGATGTTTGTGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CAA 90 bp GCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCACAGGCAGGCGGGCTGTaGTCAGAGCCTTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ATPGTLTTPRLGPSCLQSQAGGL*SEPSCS
Trigger: GCTGCAGGAAGGCTCTGACAACAGCCCGCCTGCCTG...TGACTGAAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS GCA 90 bp TCCCTGAGCAGCTCCAGTTGCCGTAGCAGGCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCGACCACGTCTCTCCCGCTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: SLSSSSCRSRLTFSF*MFLETATTSLPLPQ
Trigger: CTGCGGCAGCGGGAGAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAACTGGAGCTGCTCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS GCA 90 bp AGCCCTGGCTGCTGCCTCATGAAATGCAAATTCTGCGGGAAATCATaGCGGGTCCCTCCCAGGGAATCGCAGCTGACGCTAGGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SPGCCLMKCKFCGKS*RVPPRESQLTLGWA
Trigger: GGCCCAGCCTAGCGTCAGCTGCGATTCCCTGGGAGGGACCCGGCATGATTTCCCGCAGAATTTGCATTTCATGAGGCAGCAGCCAGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 90 bp CCTCCTCCCTGCAGCCCTGGCTGCTGCCTCATGAAATGCAAATTCTaGGGGAAATCATGCCGGGTCCCTCCCAGGGAATCGCAGCTGACG +
Preference number: 5 (lower is better)
Translates to: PPPCSPGCCLMKCKF*GKSCRVPPRESQLT
Trigger: CGTCAGCTGCGATTCCCTGGGAGGGACCCGGCATGATTTCCCGCAGAATTTGCATTTCATGAGGCAGCAGCCAGGGCTGCAGGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS CCA 90 bp TGTGAAGCCAAGGGAGGGTCAGAAGAAATTCAGGAGGGGAGCGGATaGGGTGCAAGTGTGTCTGAAGGCTCAGCCGAGGGCCCTCCCTGC +
Preference number: 5 (lower is better)
Translates to: CEAKGGSEEIQEGSG*GASVSEGSAEGPPC
Trigger: GCAGGGAGGGCCCTCGGCTGAGCCTTCAGACACACTTGCACCCCATCCGCTCCCCTCCTGAATTTCTTCTGACCCTCCCTTGGCTTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528315.1
ENST00000528542.6
ENST00000530183.1
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
CDS-3UTR CAA 90 bp GGGGAGAGCCTGCATCCTGAGTGGGCACCCCCGACCCATGACAAGCCTCCTGCAAAGCCCTTAGCCTCCTaGTCACACAGCAGAAACAGC +
Preference number: 5 (lower is better)
Translates to: GESLHPEWAPPTHDKPPAKPLAS*SHSRNS
Trigger: GCTGTTTCTGCTGTGTGACAAGGAGGCTAAGGGCTT...TGCAGGAGGCTTGTCATGGGTCGGGGGTGCCCACTCAGGATGCAGGCTCTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS GCA 90 bp TCCCTGAGCAGCTCCAGTTGCCGTAGCAGGCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCGACCACGTCTCGTTGGGTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: SLSSSSCRSRLTFSF*MFLETATTSRWVCS
Trigger: GGAGCAAACCCAACGAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAACTGGAGCTGCTCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525077.2
ENST00000526531.1
CDS GCA 90 bp TCCCTGAGCAGCTCCAGTTGCCGTAGCAGGCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCGACCACGTCTCTGTGGATGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SLSSSSCRSRLTFSF*MFLETATTSLWMGG
Trigger: ACCTCCCATCCACAGAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAACTGGAGCTGCTCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS-3UTR CAA 90 bp ACTCCTAGGCTAGGTCCTTCATGTCTTCAGTCAGGCGAGCCTGGGGCCCACTGGAAGCCCTTAGCCTCCTaGTCACACAGCAGAAACAGC +
Preference number: 5 (lower is better)
Translates to: TPRLGPSCLQSGEPGAHWKPLAS*SHSRNS
Trigger: GCTGTTTCTGCTGTGTGACAAGGAGGCTAAGGGCTT...CCAGTGGGCCCCAGGCTCGCCTGACTGAAGACATGAAGGACCTAGCCTAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS-3UTR CAA 90 bp ACCCTGGCCACTCCCGGGACCCTGACCACTCCTAGGCTAGGTCCTTCATGTCTTAAGCCCTTAGCCTCCTaGTCACACAGCAGAAACAGC +
Preference number: 5 (lower is better)
Translates to: TLATPGTLTTPRLGPSCLKPLAS*SHSRNS
Trigger: GCTGTTTCTGCTGTGTGACAAGGAGGCTAAGGGCTT...AAGACATGAAGGACCTAGCCTAGGAGTGGTCAGGGTCCCGGGAGTGGCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS TCA 90 bp TGTTTTCCTTCCTTATTCTGGTCCTATTGGCCTGGAAACAAGAGGTaGCAGGCCAGCTCCCAGCCCTACCGGAGCTTAGCACAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: CFPSLFWSYWPGNKR*QASSQPYRSLAQER
Trigger: CCTCTCCTGTGCTAAGCTCCGGTAGGGCTGGGAGCTGGCCTGTCACCTCTTGTTTCCAGGCCAATAGGACCAGAATAAGGAAGGAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534191.1
CDS CCA 72 bp GGGGTAACCGGAGTTCCCGACCGAGACGCTCAGGTTTaGCGCGGGCCACGGCGGCCCGGAGGGGGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: GVTGVPDRDAQV*RGPRRPGGGAG
Trigger: CCCGGCACCCCCTCCGGGCCGCCGTGGCCCGCGCCAAACCTGAGCGTCTCGGTCGGGAACTCCGGTTACCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527089.5
ENST00000534606.1
CDS CAA 72 bp GGGGGTAACCGGAGTTCCCGACCGAGACGCTCAGGTTaGGCGCGGGCCACGGCGGCCCGGAGGGGGTGCCGG +
Preference number: 6 (lower is better)
Translates to: GGNRSSRPRRSG*ARATAARRGCR
Trigger: CCGGCACCCCCTCCGGGCCGCCGTGGCCCGCGCCAAACCTGAGCGTCTCGGTCGGGAACTCCGGTTACCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000527089.5
ENST00000534606.1
CDS GCA 72 bp CGCAGGCCCGCGCGTTCCAGGTCCTGCTCGCGGCTCTaGAGCTCCAGCTCCAGACGGCTTCTCCGCTCCCCG +
Preference number: 6 (lower is better)
Translates to: RRPARSRSCSRL*SSSSRRLLRSP
Trigger: CGGGGAGCGGAGAAGCCGTCTGGAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGCGGGCCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528542.6
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp TCCTGCGCCCCCTCCAGCTGCGTTCGCAGCGCCTCGTaGGCCCGCCACAGCTGGGAGTTCTGGGCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: SCAPSSCVRSAS*ARHSWEFWACA
Trigger: GGCACAGGCCCAGAACTCCCAGCTGTGGCGGGCGCACGAGGCGCTGCGAACGCAGCTGGAGGGGGCGCAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp TCCAGCCTGCGGATCTGCTCCTGCGCCCCCTCCAGCTaGGTTCGCAGCGCCTCGTGCGCCCGCCACAGCTGG +
Preference number: 6 (lower is better)
Translates to: SSLRICSCAPSS*VRSASCARHSW
Trigger: CCAGCTGTGGCGGGCGCACGAGGCGCTGCGAACGCAGCTGGAGGGGGCGCAGGAGCAGATCCGCAGGCTGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp CGTGCGTGGTCGGTGAGGTGTGTGTACCCTGGGCAGTaGCGGTATGTGGCCCCGCGCCCGGCGCTGCCCCTC +
Preference number: 6 (lower is better)
Translates to: RAWSVRCVYPGQ*RYVAPRPALPL
Trigger: GAGGGGCAGCGCCGGGCGCGGGGCCACATACCGGCACTGCCCAGGGTACACACACCTCACCGACCACGCACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS CCA 72 bp AAGAGCCCAGCAGCTCGGGGCGCTCGCGCTGCAGCCTaGCCCAGAGCGTCCTCACAGCCCGCTGCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: KSPAARGARAAA*PRASSQPAAWR
Trigger: CCTCCAGGCAGCGGGCTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGCGCCCCGAGCTGCTGGGCTCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp TCCTCGAAAGAGCCCAGCAGCTCGGGGCGCTCGCGCTaGAGCCTGGCCCAGAGCGTCCTCACAGCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: SSKEPSSSGRSR*SLAQSVLTARC
Trigger: GCAGCGGGCTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGCGCCCCGAGCTGCTGGGCTCTTTCGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527763.5
ENST00000528542.6
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp CTCTCCCGCTGCCGCAGGCCCGCGCGTTCCAGGTCCTaGTCGCGGCTCTGCAGCTCCAGCTCCAGACGGCTT +
Preference number: 6 (lower is better)
Translates to: LSRCRRPARSRS*SRLCSSSSRRL
Trigger: AAGCCGTCTGGAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGCGGGCCTGCGGCAGCGGGAGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS GCA 72 bp CTCGTGCGCCCGCCACAGCTGGGAGTTCTGGGCCTGTaGCTCCAGGTGCTCCGCAGCCTGGGCGTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LVRPPQLGVLGL*LQVLRSLGVQL
Trigger: CAGCTGCACGCCCAGGCTGCGGAGCACCTGGAGGCACAGGCCCAGAACTCCCAGCTGTGGCGGGCGCACGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp TGGCGGCCTCGTGCTTCGCTCTCCAGCCTGCGGATCTaGTCCTGCGCCCCCTCCAGCTGCGTTCGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: WRPRASLSSLRI*SCAPSSCVRSA
Trigger: GGCGCTGCGAACGCAGCTGGAGGGGGCGCAGGAGCAGATCCGCAGGCTGGAGAGCGAAGCACGAGGCCGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp ACCTCCCGCTGCCGCAGGCCCGCGCGTTCCAGGTCCTaGTCGCGGCTCTGCAGCTCCAGCTCCAGACGGCTT +
Preference number: 6 (lower is better)
Translates to: TSRCRRPARSRS*SRLCSSSSRRL
Trigger: AAGCCGTCTGGAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGCGGGCCTGCGGCAGCGGGAGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS CCA 72 bp AAGAGCCCAGCAGCTCGGGGCGCTCGCGCTGCAGCCTaGCCCAGAGCGTCCTCACAGCCCGCTGCTTGCCCA +
Preference number: 6 (lower is better)
Translates to: KSPAARGARAAA*PRASSQPAACP
Trigger: TGGGCAAGCAGCGGGCTGTGAGGACGCTCTGGGCCAGGCTGCAGCGCGAGCGCCCCGAGCTGCTGGGCTCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527763.5
ENST00000528542.6
CDS CCA 72 bp TCCAGACGGCTTCTCCGCTCCCCGCGGGCGAAGTTCTaGGACGCACGGAGGACCACTGAGCCTCCGCCGGCC +
Preference number: 6 (lower is better)
Translates to: SRRLLRSPRAKF*DARRTTEPPPA
Trigger: GGCCGGCGGAGGCTCAGTGGTCCTCCGTGCGTCCCAGAACTTCGCCCGCGGGGAGCGGAGAAGCCGTCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
CDS CCA 72 bp CCTCCCGTGAGCGCTTTCGCCCCTGCCCGGCGTGCGTaGTCGGTGAGGTGTGTGTACCCTGGGCAGTGCCGG +
Preference number: 6 (lower is better)
Translates to: PPVSAFAPARRA*SVRCVYPGQCR
Trigger: CCGGCACTGCCCAGGGTACACACACCTCACCGACCACGCACGCCGGGCAGGGGCGAAAGCGCTCACGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS TCA 72 bp ACAGGAGCACTTGCTGCGTGCAGGGCATCCCTCCCGTaGGCGCTTTCGCCCCTGCCCGGCGTGCGTGGTCGG +
Preference number: 6 (lower is better)
Translates to: TGALAACRASLP*ALSPLPGVRGR
Trigger: CCGACCACGCACGCCGGGCAGGGGCGAAAGCGCTCACGGGAGGGATGCCCTGCACGCAGCAAGTGCTCCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 72 bp CGAGCCCGCCCGACTCAAAGGTCTCCTCGGGAGTCCTaGAGGGGTTCGCTCCCTGGGCTGACGCCACCCCCA +
Preference number: 6 (lower is better)
Translates to: RARPTQRSPRES*RGSLPGLTPPP
Trigger: TGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGACCTTTGAGTCGGGCGGGCTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527763.5
ENST00000528542.6
ENST00000528694.1
ENST00000530688.5
ENST00000530737.2
CDS GCA 72 bp AACTCCCGCTGCCGCAGGCCCGCGCGTTCCAGGTCCTaGTCGCGGCTCTGCAGCTCCAGCTCCAGACGGCTT +
Preference number: 6 (lower is better)
Translates to: NSRCRRPARSRS*SRLCSSSSRRL
Trigger: AAGCCGTCTGGAGCTGGAGCTGCAGAGCCGCGAGCAGGACCTGGAACGCGCGGGCCTGCGGCAGCGGGAGTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
CDS GCA 72 bp CGTGCAGGGCATCCCTCCCGTGAGCGCTTTCGCCCCTaGCCGGCGTGCGTGGTCGGTGAGGTGTGTGTACCC +
Preference number: 6 (lower is better)
Translates to: RAGHPSRERFRP*PACVVGEVCVP
Trigger: GGGTACACACACCTCACCGACCACGCACGCCGGGCAGGGGCGAAAGCGCTCACGGGAGGGATGCCCTGCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 72 bp CTTGCCAGCGCTACAGCCCCCTGGCACCGCCTCTGCTaGTGCCCTGAGGCCCTCCATTGGCCCCCATACCCC +
Preference number: 6 (lower is better)
Translates to: LASATAPWHRLC*CPEALHWPPYP
Trigger: GGGGTATGGGGGCCAATGGAGGGCCTCAGGGCAGCAGCAGAGGCGGTGCCAGGGGGCTGTAGCGCTGGCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS CCA 72 bp AGCTGCGTTCGCAGCGCCTCGTGCGCCCGCCACAGCTaGGAGTTCTGGGCCTGTGCCTCCAGGTGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: SCVRSASCARHS*EFWACASRCSA
Trigger: TGCGGAGCACCTGGAGGCACAGGCCCAGAACTCCCAGCTGTGGCGGGCGCACGAGGCGCTGCGAACGCAGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS CCA 72 bp CCCAGCCCCGTCCCACGGCACCGTTGGGTTTGCTCCTaGCGGCCTCGTGCTTCGCTCTCCAGCCTGCGGATC +
Preference number: 6 (lower is better)
Translates to: PSPVPRHRWVCS*RPRASLSSLRI
Trigger: GATCCGCAGGCTGGAGAGCGAAGCACGAGGCCGCCAGGAGCAAACCCAACGGTGCCGTGGGACGGGGCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS TCA 72 bp GGGGTCGGGTGGAGAAGACCGGACGGGGGTGATACGTaGGGCCCAGTGGGATCTCCTCGGGCTGAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: GVGWRRPDGGDT*GPVGSPRAEGS
Trigger: GCTGCCCTCAGCCCGAGGAGATCCCACTGGGCCTCACGTATCACCCCCGTCCGGTCTTCTCCACCCGACCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527763.5
ENST00000528694.1
CDS GCA 72 bp CCCACGGCACCGTTGGGTTTGCTCCTGGCGGCCTCGTaGTTCGCTCTCCAGCCTGCGGATCTGCTCCTGCGC +
Preference number: 6 (lower is better)
Translates to: PTAPLGLLLAAS*FALQPADLLLR
Trigger: GCGCAGGAGCAGATCCGCAGGCTGGAGAGCGAAGCACGAGGCCGCCAGGAGCAAACCCAACGGTGCCGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp CATCCCTCCCGTGAGCGCTTTCGCCCCTGCCCGGCGTaGGTGGTCGGTGAGGTGTGTGTACCCTGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: HPSRERFRPCPA*VVGEVCVPWAV
Trigger: CACTGCCCAGGGTACACACACCTCACCGACCACGCACGCCGGGCAGGGGCGAAAGCGCTCACGGGAGGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS TCA 72 bp CTCCTCGGGAGTCCTGCAGGGGTTCGCTCCCTGGGCTaGCGCCACCCCCACAAACATCCCTGCGGGCATGGA +
Preference number: 6 (lower is better)
Translates to: LLGSPAGVRSLG*RHPHKHPCGHG
Trigger: TCCATGCCCGCAGGGATGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp CGGGTGAGAGAAGGGGACACGAGAGGCCAGGGCCATTaGCTCCAGGCCACGTTGTTGTCTCGCCCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RVREGDTRGQGH*LQATLLSRPPS
Trigger: GGAGGGCGGGCGAGACAACAACGTGGCCTGGAGGCAATGGCCCTGGCCTCTCGTGTCCCCTTCTCTCACCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS GCA 72 bp GAACTTGCCAGCGCTACAGCCCCCTGGCACCGCCTCTaGTGCTGCCCTGAGGCCCTCCATTGGCCCCCATAC +
Preference number: 6 (lower is better)
Translates to: ELASATAPWHRL*CCPEALHWPPY
Trigger: GTATGGGGGCCAATGGAGGGCCTCAGGGCAGCAGCAGAGGCGGTGCCAGGGGGCTGTAGCGCTGGCAAGTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 72 bp GGGCGGGAATTGCCCAGGACCGGGGCCACCCCCAGCTaGTCCAGCACAGTGTGGAATCGCTCCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: GRELPRTGATPS*SSTVWNRSSSS
Trigger: GGAAGAGGAGGAGCGATTCCACACTGTGCTGGAGCAGCTGGGGGTGGCCCCGGTCCTGGGCAATTCCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530688.5
CDS CCA 72 bp GGGCTGACGCCACCCCCACAAACATCCCTGCGGGCATaGAGCGAGCGATTACCAGGGCTGTGGGTCGCCACC +
Preference number: 6 (lower is better)
Translates to: GLTPPPQTSLRA*SERLPGLWVAT
Trigger: GGTGGCGACCCACAGCCCTGGTAATCGCTCGCTCCATGCCCGCAGGGATGTTTGTGGGGGTGGCGTCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS CCA 72 bp AAGGTCTCCTCGGGAGTCCTGCAGGGGTTCGCTCCCTaGGCTGACGCCACCCCCACAAACATCCCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: KVSSGVLQGFAP*ADATPTNIPAG
Trigger: GCCCGCAGGGATGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGACCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS CCA 72 bp GCGTGCAGCTGCTGCTCTAACTGGAGGGTGGAAGGATaGAGACCGGCGAGGAACGCCCCCTCTTCCCCGGGG +
Preference number: 6 (lower is better)
Translates to: ACSCCSNWRVEG*RPARNAPSSPG
Trigger: CCCCGGGGAAGAGGGGGCGTTCCTCGCCGGTCTCCATCCTTCCACCCTCCAGTTAGAGCAGCAGCTGCACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS CAA 72 bp ACGAGAGGCCAGGGCCATTGCCTCCAGGCCACGTTGTaGTCTCGCCCGCCCTCCGGCTTGCCGGCTAGACCT +
Preference number: 6 (lower is better)
Translates to: TRGQGHCLQATL*SRPPSGLPARP
Trigger: AGGTCTAGCCGGCAAGCCGGAGGGCGGGCGAGACAACAACGTGGCCTGGAGGCAATGGCCCTGGCCTCTCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS CAA 72 bp GACACGAGAGGCCAGGGCCATTGCCTCCAGGCCACGTaGTTGTCTCGCCCGCCCTCCGGCTTGCCGGCTAGA +
Preference number: 6 (lower is better)
Translates to: DTRGQGHCLQAT*LSRPPSGLPAR
Trigger: TCTAGCCGGCAAGCCGGAGGGCGGGCGAGACAACAACGTGGCCTGGAGGCAATGGCCCTGGCCTCTCGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS CAA 90 bp AGAGAAGGGGACACGAGAGGCCAGGGCCATTGCCTCCAGGCCACGTaGTTGTCTCGCCCGCCCTCCGGCTTGCCGGCTAGACCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: REGDTRGQGHCLQAT*LSRPPSGLPARPEV
Trigger: GACCTCAGGTCTAGCCGGCAAGCCGGAGGGCGGGCGAGACAACAACGTGGCCTGGAGGCAATGGCCCTGGCCTCTCGTGTCCCCTTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528542.6
CDS GCA 72 bp TCTTCCTCCTCCTCATCCAGAGAGCCCGCCGTGCCCTaGACGTCGAGCCCGCCCGACTCAAAGGTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SSSSSSREPAVP*TSSPPDSKVSS
Trigger: CGAGGAGACCTTTGAGTCGGGCGGGCTCGACGTGCAGGGCACGGCGGGCTCTCTGGATGAGGAGGAGGAAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527763.5
ENST00000528542.6
ENST00000528694.1
ENST00000530688.5
ENST00000530737.2
CDS GCA 72 bp GACCACGTCTCGTTGGGTTTGCTCCTGGCGGCCTCGTaGTTCGCTCTCCAGCCTGCGGATCTGCTCCTGCGC +
Preference number: 6 (lower is better)
Translates to: DHVSLGLLLAAS*FALQPADLLLR
Trigger: GCGCAGGAGCAGATCCGCAGGCTGGAGAGCGAAGCACGAGGCCGCCAGGAGCAAACCCAACGAGACGTGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525077.2
ENST00000526531.1
CDS GCA 72 bp CCGACTCACTTGCCCAGGACCGGGGCCACCCCCAGCTaGTCCAGCACAGTGTGGAATCGCTCCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PTHLPRTGATPS*SSTVWNRSSSS
Trigger: GGAAGAGGAGGAGCGATTCCACACTGTGCTGGAGCAGCTGGGGGTGGCCCCGGTCCTGGGCAAGTGAGTCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530737.2
CDS CCA 72 bp CTGGAGACGGCGACCACGTCTCGTTGGGTTTGCTCCTaGCGGCCTCGTGCTTCGCTCTCCAGCCTGCGGATC +
Preference number: 6 (lower is better)
Translates to: LETATTSRWVCS*RPRASLSSLRI
Trigger: GATCCGCAGGCTGGAGAGCGAAGCACGAGGCCGCCAGGAGCAAACCCAACGAGACGTGGTCGCCGTCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525077.2
ENST00000526531.1
CDS CCA 72 bp GACAGCATGCAGGCAGAGAAACAGCAGAGCGGGCAGTaGGAGCGGGGCCAGCGCCGACTCACTTGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: DSMQAEKQQSGQ*ERGQRRLTCPG
Trigger: TCCTGGGCAAGTGAGTCGGCGCTGGCCCCGCTCCCACTGCCCGCTCTGCTGTTTCTCTGCCTGCATGCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS TCA 72 bp CCTCCCAGGGAATCGCAGCTGACGCTAGGCTGGGCCTaGCCCGGCCTAGAGACCCTGTGCAGAACCAGCACT +
Preference number: 6 (lower is better)
Translates to: PPRESQLTLGWA*PGLETLCRTST
Trigger: AGTGCTGGTTCTGCACAGGGTCTCTAGGCCGGGTCAGGCCCAGCCTAGCGTCAGCTGCGATTCCCTGGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 72 bp GGAGACTTCTTCGCCCCTGGGCAGGACAGGAGCACTTaGTGCGTGCAGGGCATCCCTCCCGTGAGCGCTTTC +
Preference number: 6 (lower is better)
Translates to: GDFFAPGQDRST*CVQGIPPVSAF
Trigger: GAAAGCGCTCACGGGAGGGATGCCCTGCACGCAGCAAGTGCTCCTGTCCTGCCCAGGGGCGAAGAAGTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 72 bp TGTGCCTCCAGGTGCTCCGCAGCCTGGGCGTGCAGCTaGTGCTCTAACTGGAGGGTGGAAGGATGGAGACCG +
Preference number: 6 (lower is better)
Translates to: CASRCSAAWACS*CSNWRVEGWRP
Trigger: CGGTCTCCATCCTTCCACCCTCCAGTTAGAGCAGCAGCTGCACGCCCAGGCTGCGGAGCACCTGGAGGCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528694.1
ENST00000530688.5
CDS CCA 72 bp GAGGGCTCAGCCAGTCCTGACCAAGTCCTTAGCCCCTaGCCTGGGCCTGTGTGGCCCAGCCTCATGACAGCT +
Preference number: 6 (lower is better)
Translates to: EGSASPDQVLSP*PGPVWPSLMTA
Trigger: AGCTGTCATGAGGCTGGGCCACACAGGCCCAGGCCAGGGGCTAAGGACTTGGTCAGGACTGGCTGAGCCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525077.2
CDS CCA 72 bp GGAGCGAGCGATTACCAGGGCTGTGGGTCGCCACCGTaGCTGTGTCCCCGTTCACCCTCCCAACGAGTATCC +
Preference number: 6 (lower is better)
Translates to: GASDYQGCGSPP*LCPRSPSQRVS
Trigger: GGATACTCGTTGGGAGGGTGAACGGGGACACAGCCACGGTGGCGACCCACAGCCCTGGTAATCGCTCGCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534191.1
CDS CCA 72 bp AAGGTCTCCTCGGGAGTCCTGCAGGGGTTCGCTCCCTaGGCTGACGCCACCCCCACAAACATCCCGGAGCTT +
Preference number: 6 (lower is better)
Translates to: KVSSGVLQGFAP*ADATPTNIPEL
Trigger: AAGCTCCGGGATGTTTGTGGGGGTGGCGTCAGCCCAGGGAGCGAACCCCTGCAGGACTCCCGAGGAGACCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530737.2
CDS CAA 90 bp CAAACCCTTAGGAGACTTCTTCGCCCCTGGGCAGGACAGGAGCACTaGCTGCGTGCAGGGCATCCCTCCCGTGAGCGCTTTCGCCCCTGC +
Preference number: 6 (lower is better)
Translates to: QTLRRLLRPWAGQEH*LRAGHPSRERFRPC
Trigger: GCAGGGGCGAAAGCGCTCACGGGAGGGATGCCCTGCACGCAGCAAGTGCTCCTGTCCTGCCCAGGGGCGAAGAAGTCTCCTAAGGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS TCA 72 bp AATTCAGGAGGGGAGCGGATGGGGTGCAAGTGTGTCTaGAGGCTCAGCCGAGGGCCCTCCCTGCAGCAGGTG +
Preference number: 6 (lower is better)
Translates to: NSGGERMGCKCV*RLSRGPSLQQV
Trigger: CACCTGCTGCAGGGAGGGCCCTCGGCTGAGCCTTCAGACACACTTGCACCCCATCCGCTCCCCTCCTGAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528315.1
ENST00000528542.6
ENST00000530183.1
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
CDS TCA 72 bp CAGGCTCACCCAGGCCCAGGCAGAACTCCCTGGCGGTaGGGAAGCCAGTGTGAGCCCGGTCCAGACTTTCAA +
Preference number: 6 (lower is better)
Translates to: QAHPGPGRTPWR*GSQCEPGPDFQ
Trigger: TTGAAAGTCTGGACCGGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCTGCCTGGGCCTGGGTGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530737.2
ENST00000534191.1
ENST00000534606.1
CDS GCA 72 bp GCCTCCTTGTCACACAGCAGAAACAGCTCCTCAGCCTaGTCCAGTATTGCAGCCCGCGGCCCTGCAGAGCCC +
Preference number: 6 (lower is better)
Translates to: ASLSHSRNSSSA*SSIAARGPAEP
Trigger: GGGCTCTGCAGGGCCGCGGGCTGCAATACTGGAGCAGGCTGAGGAGCTGTTTCTGCTGTGTGACAAGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528542.6
ENST00000530183.1
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
ENST00000534606.1
CDS CCA 72 bp GGGTACTGCCCCAGTGGGTCTGGCATCTCAGGAGGCTaGAACCCAGGAGGGGCTGCCAACTTCAGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: GYCPSGSGISGG*NPGGAANFRRG
Trigger: TCCTCTCCTGAAGTTGGCAGCCCCTCCTGGGTTCCAGCCTCCTGAGATGCCAGACCCACTGGGGCAGTACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528315.1
ENST00000528542.6
ENST00000530183.1
ENST00000533803.1
ENST00000534191.1
CDS CAA 72 bp AGGAGACTTCTTCGCCCCTGGGCAGGACAGGAGCACTaGCTGCGTGCAGGGCATCCCTCCCGTGAGCGCTTT +
Preference number: 6 (lower is better)
Translates to: RRLLRPWAGQEH*LRAGHPSRERF
Trigger: AAAGCGCTCACGGGAGGGATGCCCTGCACGCAGCAAGTGCTCCTGTCCTGCCCAGGGGCGAAGAAGTCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS TCA 72 bp CCAGACTTTCAAACACAGCCTCCAGCTGCTCTGGCGTaGGGGGCAGGTCGCTCTGGAGACCCTGCAGGTCGT +
Preference number: 6 (lower is better)
Translates to: PDFQTQPPAALA*GAGRSGDPAGR
Trigger: ACGACCTGCAGGGTCTCCAGAGCGACCTGCCCCTCACGCCAGAGCAGCTGGAGGCTGTGTTTGAAAGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528542.6
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
ENST00000534606.1
CDS TCA 72 bp CCCAGGCAGAACTCCCTGGCGGTGAGGAAGCCAGTGTaGGCCCGGTCCAGACTTTCAAACACAGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PRQNSLAVRKPV*ARSRLSNTASS
Trigger: GCTGGAGGCTGTGTTTGAAAGTCTGGACCGGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCTGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
ENST00000530737.2
ENST00000534191.1
ENST00000534606.1
CDS CCA 72 bp CTGAAGGGCTGGAATCACTGTCCCGCCCGGCAACCCTaGGGGGTACAAGGCCTCTGCTTTTCAAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: LKGWNHCPARQP*GVQGLCFSRKG
Trigger: CCCCTTCCTTGAAAAGCAGAGGCCTTGTACCCCCCAGGGTTGCCGGGCGGGACAGTGATTCCAGCCCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528315.1
ENST00000533803.1
ENST00000534191.1
CDS TCA 72 bp CAAACATCCCCAGGCCCAGGCAGAACTCCCTGGCGGTaGGGAAGCCAGTGTGAGCCCGGTCCAGACTTTCAA +
Preference number: 6 (lower is better)
Translates to: QTSPGPGRTPWR*GSQCEPGPDFQ
Trigger: TTGAAAGTCTGGACCGGGCTCACACTGGCTTCCTCACCGCCAGGGAGTTCTGCCTGGGCCTGGGGATGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000528542.6
CDS CCA 72 bp GGAGGAGCTGGAGGTGATGGCAATCTCAGGGGCCAGTaGAGAAGACCTGGTGATAAGGAAGGTGGGGTCCTG +
Preference number: 6 (lower is better)
Translates to: GGAGGDGNLRGQ*RRPGDKEGGVL
Trigger: CAGGACCCCACCTTCCTTATCACCAGGTCTTCTCCACTGGCCCCTGAGATTGCCATCACCTCCAGCTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525077.2
ENST00000533803.1
ENST00000534191.1
CDS GCA 72 bp AGCTCCAGTTGCCGTAGCAGGCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCGACCACGTCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: SSSCRSRLTFSF*MFLETATTSLP
Trigger: CGGGAGAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAACTGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450448.5
ENST00000528542.6
CDS GCA 72 bp TGCAGCCCTGGCTGCTGCCTCATGAAATGCAAATTCTaGGGGAAATCATGCCGGGTCCCTCCCAGGGAATCG +
Preference number: 6 (lower is better)
Translates to: CSPGCCLMKCKF*GKSCRVPPRES
Trigger: CGATTCCCTGGGAGGGACCCGGCATGATTTCCCGCAGAATTTGCATTTCATGAGGCAGCAGCCAGGGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528694.1
CDS GCA 72 bp AGCTCCAGTTGCCGTAGCAGGCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCGACCACGTCTCGTTGG +
Preference number: 6 (lower is better)
Translates to: SSSCRSRLTFSF*MFLETATTSRW
Trigger: CCAACGAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAACTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525077.2
ENST00000526531.1
CDS GCA 72 bp AGCTCCAGTTGCCGTAGCAGGCTGACTTTCTCTTTCTaGATGTTCCTGGAGACGGCGACCACGTCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: SSSCRSRLTFSF*MFLETATTSLW
Trigger: CCACAGAGACGTGGTCGCCGTCTCCAGGAACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAACTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000527763.5
ENST00000528694.1
ENST00000530688.5
CDS CAA 72 bp TGCAGGTCGTGCTTGGTGATGAAGCCCTTAGCCTCCTaGTCACACAGCAGAAACAGCTCCTCAGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: CRSCLVMKPLAS*SHSRNSSSACS
Trigger: GGAGCAGGCTGAGGAGCTGTTTCTGCTGTGTGACAAGGAGGCTAAGGGCTTCATCACCAAGCACGACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528542.6
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
ENST00000534606.1
CDS CAA 90 bp TGGAGACCCTGCAGGTCGTGCTTGGTGATGAAGCCCTTAGCCTCCTaGTCACACAGCAGAAACAGCTCCTCAGCCTGCTCCAGTATTGCA +
Preference number: 6 (lower is better)
Translates to: WRPCRSCLVMKPLAS*SHSRNSSSACSSIA
Trigger: TGCAATACTGGAGCAGGCTGAGGAGCTGTTTCTGCTGTGTGACAAGGAGGCTAAGGGCTTCATCACCAAGCACGACCTGCAGGGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000527089.5
ENST00000528542.6
ENST00000530737.2
ENST00000533803.1
ENST00000534191.1
ENST00000534606.1
CDS GCA 72 bp CGCAGCCGTGTATTCAGCTCCCTGAGCAGCTCCAGTTaGCGTAGCAGGCTGACTTTCTCTTTCTGCATGTTC +
Preference number: 6 (lower is better)
Translates to: RSRVFSSLSSSS*RSRLTFSFCMF
Trigger: GAACATGCAGAAAGAGAAAGTCAGCCTGCTACGGCAACTGGAGCTGCTCAGGGAGCTGAATACACGGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450448.5
ENST00000525077.2
ENST00000526531.1
ENST00000527763.5
ENST00000528542.6
ENST00000528694.1
ENST00000530688.5
CDS GCA 72 bp TGCTGCCTCATGAAATGCAAATTCTGCGGGAAATCATaGCGGGTCCCTCCCAGGGAATCGCAGCTGACGCTA +
Preference number: 6 (lower is better)
Translates to: CCLMKCKFCGKS*RVPPRESQLTL
Trigger: TAGCGTCAGCTGCGATTCCCTGGGAGGGACCCGGCATGATTTCCCGCAGAATTTGCATTTCATGAGGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528694.1