RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRACR2A (Homo sapiens)

Ensembl gene IDs: ENSG00000130038

Ensembl transcript IDs: ENST00000252322.1, ENST00000333750.9, ENST00000440314.7, ENST00000514026.2, ENST00000535292.1, ENST00000535507.1

Found 500 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCACCACACTGTCTTTGGCCTGCAGGAAGCCGCAAGTCGAGCCCTaGATAGTTGTCACGGCAACAGCAGTGCTGAGGCTCCTAAGGGCA +
Preference number: 1 (lower is better)
Translates to: GTTLSLACRKPQVEP*IVVTATAVLRLLRA
Trigger: TGCCCTTAGGAGCCTCAGCACTGCTGTTGCCGTGACAACTATGCAGGGCTCGACTTGCGGCTTCCTGCAGGCCAAAGACAGTGTGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 90 bp GGTAATGGATTGCTACTAGTGGCAGCTGGGGAGGCCGCGGGGTGTTaGGACGGATGCTTTGTTGGGCACCACACTGTCTTTGGCCTGCAG +
Preference number: 1 (lower is better)
Translates to: GNGLLLVAAGEAAGC*DGCFVGHHTVFGLQ
Trigger: CTGCAGGCCAAAGACAGTGTGGTGCCCAACAAAGCATCCGTCTCAACACCCCGCGGCCTCCCCAGCTGCCACTAGTAGCAATCCATTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 90 bp TCTGAGCATTTGCTCAGGGGTTGCTCAAAGCCACCATCCAGGAGCTaGGGCAGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGC +
Preference number: 1 (lower is better)
Translates to: SEHLLRGCSKPPSRS*GRGSSSTEMILRSG
Trigger: GCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCTGCCCCAGCTCCTGGATGGTGGCTTTGAGCAACCCCTGAGCAAATGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 90 bp GCTTCCTCCACGCTGCTCAGCCACCGCCGGACCGACAGGAACGACTaGTTGTCTGTGAGATCGTACATGACGATGACACCATCTGCCTTT +
Preference number: 1 (lower is better)
Translates to: ASSTLLSHRRTDRND*LSVRSYMTMTPSAF
Trigger: AAAGGCAGATGGTGTCATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGGCTGAGCAGCGTGGAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 90 bp CGGGATTTGTCCCTGTACCCCCTGGTCAGAGACCTCTTCCTCTTCTaGGCATTTGCTCAGGGGTTGCTCAAAGCCACCATCCAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: RDLSLYPLVRDLFLF*AFAQGLLKATIQEL
Trigger: CAGCTCCTGGATGGTGGCTTTGAGCAACCCCTGAGCAAATGCTCAGAAGAGGAAGAGGTCTCTGACCAGGGGGTACAGGGACAAATCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 90 bp GGAAGGATGTCTTCCCCACCGCGGAATTGCCCACGAACACAATCTTaGAGAGCCGGTCAGGGGCAGAGGGAGAGCTTTCCTCCTTACACA +
Preference number: 1 (lower is better)
Translates to: GRMSSPPRNCPRTQS*RAGQGQRESFPPYT
Trigger: TGTGTAAGGAGGAAAGCTCTCCCTCTGCCCCTGACCGGCTCTTCAAGATTGTGTTCGTGGGCAATTCCGCGGTGGGGAAGACATCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 90 bp ACGAGCCTGCGAGGGAGTAAGGCAGAGAGCACTATTTTGCAGATTTaGAAGCAGGCTCAGAACATCAAGCAGCTCCAGGTTTTGCCCAGG +
Preference number: 1 (lower is better)
Translates to: TSLRGSKAESTILQI*KQAQNIKQLQVLPR
Trigger: CCTGGGCAAAACCTGGAGCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTGCCTTACTCCCTCGCAGGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 90 bp GAACGACTGCTTGTCTGTGAGATCGTACATGACGATGACACCATCTaGCTTTCTGAAGAACTGCTGGGTGATGCACCGGTACCTCTCCTG +
Preference number: 1 (lower is better)
Translates to: ERLLVCEIVHDDDTI*LSEELLGDAPVPLL
Trigger: CAGGAGAGGTACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATGTACGATCTCACAGACAAGCAGTCGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 90 bp CCAGATGGAGCAGGGACTCTTTGGTGTTGTGACCAGAGTAGGCGCTaGATTCATAGAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCTC +
Preference number: 1 (lower is better)
Translates to: PDGAGTLWCCDQSRR*IHRRSDCSPWQAAL
Trigger: GAGAGCAGCTTGCCACGGAGAACAATCTGATCTTCTATGAATGCAGCGCCTACTCTGGTCACAACACCAAAGAGTCCCTGCTCCATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 90 bp GCAGGGAAGCATCTTTTGTGTAGAGGCGTGGAGCCCAAGTCACATTaGGTTGTTGAGCTGCCTGTGGGTAATGGATTGCTACTAGTGGCA +
Preference number: 1 (lower is better)
Translates to: AGKHLLCRGVEPKSH*VVELPVGNGLLLVA
Trigger: TGCCACTAGTAGCAATCCATTACCCACAGGCAGCTCAACAACTCAATGTGACTTGGGCTCCACGCCTCTACACAAAAGATGCTTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 90 bp TGCAGATTTGAAAGCAGGCTCAGAACATCAAGCAGCTCCAGGTTTTaGCCAGGGCCACACAACTTGTGTGCAGGTCCTTATTCTGAGCAG +
Preference number: 1 (lower is better)
Translates to: CRFESRLRTSSSSRF*PGPHNLCAGPYSEQ
Trigger: CTGCTCAGAATAAGGACCTGCACACAAGTTGTGTGGCCCTGGGCAAAACCTGGAGCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 90 bp ACCTTCACACGAGCCTGCGAGGGAGTAAGGCAGAGAGCACTATTTTaGAGATTTGAAAGCAGGCTCAGAACATCAAGCAGCTCCAGGTTT +
Preference number: 1 (lower is better)
Translates to: TFTRACEGVRQRALF*RFESRLRTSSSSRF
Trigger: AAACCTGGAGCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTGCCTTACTCCCTCGCAGGCTCGTGTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 90 bp AAACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTaGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATT +
Preference number: 1 (lower is better)
Translates to: KLDVGACVNGPNIIE*LLGGPNTALGTKGI
Trigger: AATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
3UTR GCA 90 bp ACTAAGCTCTTTCCCAGGAGTTCTCTTTTGACCTTCACACGAGCCTaGGAGGGAGTAAGGCAGAGAGCACTATTTTGCAGATTTGAAAGC +
Preference number: 1 (lower is better)
Translates to: TKLFPRSSLLTFTRA*EGVRQRALFCRFES
Trigger: GCTTTCAAATCTGCAAAATAGTGCTCTCTGCCTTACTCCCTCGCAGGCTCGTGTGAAGGTCAAAAGAGAACTCCTGGGAAAGAGCTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 90 bp GTCCACATATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACTTaGCCTGGAAGCAGCTGTGTTTGCCTTGGCTGCCTTATTTTTCTG +
Preference number: 1 (lower is better)
Translates to: VHIFAYHRARSLFPT*PGSSCVCLGCLIFL
Trigger: CAGAAAAATAAGGCAGCCAAGGCAAACACAGCTGCTTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 90 bp TCAACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTaGCCCCATCAGAGAGTAGCTGTGTCGCCTGTGGTAAATTACTTC +
Preference number: 1 (lower is better)
Translates to: STNMNRTQPSYGFPF*PHQRVAVSPVVNYF
Trigger: GAAGTAATTTACCACAGGCGACACAGCTACTCTCTGATGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
3UTR TCA 90 bp TACCTACTGTGTTTATGTACCAGGCTTGATAAATACAGAAACAAATaGGACCAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTG +
Preference number: 1 (lower is better)
Translates to: YLLCLCTRLDKYRNK*DQNYKVRTLSSVML
Trigger: CAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTGGTCTCATTTGTTTCTGTATTTATCAAGCCTGGTACATAAACACAGTAGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 90 bp CAATCAATCCATTCCATTCTGAGGAACCAACAGGCCAACCACTATTaGAGAGATTTGGCTCCCAAATTGTATCTCATTATTCAGCTATTT +
Preference number: 1 (lower is better)
Translates to: QSIHSILRNQQANHY*RDLAPKLYLIIQLF
Trigger: AAATAGCTGAATAATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
3UTR CAA 90 bp GCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCCCGCTCCTTCTCGTaGTCAAGCTTATTACCCAGCAGAAGAACAGGCACCCGGTCTCCC +
Preference number: 2 (lower is better)
Translates to: ASCSPRPRGTSRSFS*SSLLPSRRTGTRSP
Trigger: GGGAGACCGGGTGCCTGTTCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTACGGACCCCCAGGCCCTaGCTCCCCGGTTCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: HDDDTICLSEELLGDAPVRTPRP*LPGSWL
Trigger: GAGCCAGGAACCGGGGAGCCAGGGCCTGGGGGTCCG...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR TCA 90 bp TTTGTTGGGCACCACACTGTCTTTGGCCTGCAGGAAGCCGCAAGTCGAGCCCTGGGGGACCAAGGGAATTaGGGGCACTCTCTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: FVGHHTVFGLQEAASRALGDQGN*GHSLSR
Trigger: CCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCC...CAGGGCTCGACTTGCGGCTTCCTGCAGGCCAAAGACAGTGTGGTGCCCAACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR TCA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGACTTCTTCAACGGAGATaGTTCTGCGGAGCGGCCGGG +
Preference number: 2 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRLLQRR*FCGAAG
Trigger: CCCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAG...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 90 bp TCCTCCACGCTGCTCAGCCACCGCCGGACCGACAGGAACGACTGCTaGTCTGTGAGATCGTACATGACGATGACACCATCTGCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: SSTLLSHRRTDRNDC*SVRSYMTMTPSAFL
Trigger: CAGAAAGGCAGATGGTGTCATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGGCTGAGCAGCGTGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAAAGTGGCCGCCATGCCTaGGGAGAACCGGTCCTCACA +
Preference number: 2 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWESGRHA*GEPVLT
Trigger: TGTGAGGACCGGTTCTCCCCAGGCATGGCGGCCACT...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 90 bp TCCTCACAGAATCTCCTCAGGAAGGATGTCTTCCCCACCGCGGAATaGCCCACGAACACAATCTTGAAGAGCCGGTCAGGGGCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: SSQNLLRKDVFPTAE*PTNTILKSRSGAEG
Trigger: TCCCTCTGCCCCTGACCGGCTCTTCAAGATTGTGTTCGTGGGCAATTCCGCGGTGGGGAAGACATCCTTCCTGAGGAGATTCTGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR GCA 90 bp TTTGTTGGGCACCACACTGTCTTTGGCCTGCAGGAAGCCGCAAGTCGAGCCCTGACCGACAGGAACGACTaGTTGTCTGTGAGATCGTAC +
Preference number: 2 (lower is better)
Translates to: FVGHHTVFGLQEAASRALTDRND*LSVRSY
Trigger: GTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGT...CAGGGCTCGACTTGCGGCTTCCTGCAGGCCAAAGACAGTGTGGTGCCCAACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAAGGTGAGTTTCAAGGGTaGGGCCTCCGGGATTTGTCC +
Preference number: 2 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWEGEFQG*GLRDLS
Trigger: GGACAAATCCCGGAGGCCCCACCCTTGAAACTCACC...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp GGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGGATTTCTTCTTAGCAGGGAGGAACCTGGCCAGATaGAGCAGGGACTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: GAVLVGPYQPQQDFFLAGRNLAR*SRDSLV
Trigger: CACCAAAGAGTCCCTGCTCCATCTGGCCAGGTTCCT...CCCTGCTAAGAAGAAATCCTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp GGAAGCATCTTTTGTGTAGAGGCGTGGAGCCCAAGTCACATTGAGTTGTTGAGCGACAAAGAAAAGGACTaGGCGGGCCCCGGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: GSIFCVEAWSPSHIELLSDKEKD*AGPGGW
Trigger: CCACCCACCGGGGCCCGCCCAGTCCTTTTCTTTGTC...GCTCAACAACTCAATGTGACTTGGGCTCCACGCCTCTACACAAAAGATGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR TCA 90 bp AGGAGCTGGGGCAGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGGCTGCCTTATTTTTCTaGAAACATATGTCCCGTTCA +
Preference number: 2 (lower is better)
Translates to: RSWGRGSSSTEMILRSGRAALFF*KHMSRS
Trigger: TGAACGGGACATATGTTTTCAGAAAAATAAGGCAGC...CCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCTGCCCCAGCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR GCA 90 bp GAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCTGCTGTCCACATATTTaGCTATCACAGAGCCAGATC +
Preference number: 2 (lower is better)
Translates to: EDQIVLRGKLLSEAPGDFCCPHI*LSQSQI
Trigger: GATCTGGCTCTGTGATAGGCAAATATGTGGACAGCA...GAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCACGGAGAACAATCTGATCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAATGTCCCTGTACCCCCTaGTCAGAGACCTCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWECPCTP*SETSSS
Trigger: AGAGGAAGAGGTCTCTGACCAGGGGGTACAGGGACA...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGATTTCTGAAGAACTGCTaGGTGATGCACCGGTACCTC +
Preference number: 2 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRFLKNC*VMHRYL
Trigger: GAGGTACCGGTGCATCACCCAGCAGTTCTTCAGAAA...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR TCA 90 bp GGAAGCATCTTTTGTGTAGAGGCGTGGAGCCCAAGTCACATTGAGTTGTTGAGCCCACGAACACAATCTTaGAGAGCCGGTCAGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GSIFCVEAWSPSHIELLSPRTQS*RAGQGQ
Trigger: CTGCCCCTGACCGGCTCTTCAAGATTGTGTTCGTGG...GCTCAACAACTCAATGTGACTTGGGCTCCACGCCTCTACACAAAAGATGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp GGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGGATTTCTTCTTAGCAGGGTTTTCCAACTTGCCCTaGAAGCAGCTGTGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: GAVLVGPYQPQQDFFLAGFSNLP*KQLCLP
Trigger: AGGCAAACACAGCTGCTTCCAGGGCAAGTTGGAAAA...CCCTGCTAAGAAGAAATCCTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR TCA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAAGCTAGAGGAAGCCGCTaGGAGAGCCACAGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: PPSISRTLSSSQCESVLEARGSR*ESHSWV
Trigger: TACCCAGCTGTGGCTCTCTCAGCGGCTTCCTCTAGC...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAACCACCATCCAGGAGCTaGGGCAGGGGGTCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: PPSISRTLSSSQCESVLEPPSRS*GRGSSS
Trigger: TGAAGAAGACCCCCTGCCCCAGCTCCTGGATGGTGG...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp AGGCAGAGAGCACTATTTTGCAGATTTGAAAGCAGGCTCAGAACATCAAGCAGCAATCAATGCCCACAGTaGCCGCCATGCCTGGGGAGA +
Preference number: 2 (lower is better)
Translates to: RQRALFCRFESRLRTSSSNQCPQ*PPCLGR
Trigger: TCTCCCCAGGCATGGCGGCCACTGTGGGCATTGATT...GCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 90 bp TTTAGAGCCTTTCAGCTGACTAAGCTCTTTCCCAGGAGTTCTCTTTaGACCTTCACACGAGCCTGCGAGGGAGTAAGGCAGAGAGCACTA +
Preference number: 2 (lower is better)
Translates to: FRAFQLTKLFPRSSL*TFTRACEGVRQRAL
Trigger: TAGTGCTCTCTGCCTTACTCCCTCGCAGGCTCGTGTGAAGGTCAAAAGAGAACTCCTGGGAAAGAGCTTAGTCAGCTGAAAGGCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp AGGCAGAGAGCACTATTTTGCAGATTTGAAAGCAGGCTCAGAACATCAAGCAGCTCAGATTGTTCTCCGTaGCAAGCTGCTCTCCGAGGC +
Preference number: 2 (lower is better)
Translates to: RQRALFCRFESRLRTSSSSDCSP*QAALRG
Trigger: GCCTCGGAGAGCAGCTTGCCACGGAGAACAATCTGA...GCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp GGAAGCATCTTTTGTGTAGAGGCGTGGAGCCCAAGTCACATTGAGTTGTTGAGCAGACGGATGCTTTGTTaGGCACCACACTGTCTTTGG +
Preference number: 2 (lower is better)
Translates to: GSIFCVEAWSPSHIELLSRRMLC*APHCLW
Trigger: CCAAAGACAGTGTGGTGCCCAACAAAGCATCCGTCT...GCTCAACAACTCAATGTGACTTGGGCTCCACGCCTCTACACAAAAGATGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR GCA 90 bp AGGCAGAGAGCACTATTTTGCAGATTTGAAAGCAGGCTCAGAACATCAAGCAGCAGCTTCTCCTTGGGATaGCAAACACCTCCTCCTCCT +
Preference number: 2 (lower is better)
Translates to: RQRALFCRFESRLRTSSSSFSLG*QTPPPP
Trigger: AGGAGGAGGAGGTGTTTGGCATCCCAAGGAGAAGCT...GCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR GCA 90 bp GCTGAAGTCTTGACCGGACAGCAAATTCATCCATCCACCTACCTACTGTGTTTACATTTGCTCAGGGGTTaGTCAAAGCCACCATCCAGG +
Preference number: 2 (lower is better)
Translates to: AEVLTGQQIHPSTYLLCLHLLRG*SKPPSR
Trigger: CCTGGATGGTGGCTTTGAGCAACCCCTGAGCAAATG...TAAACACAGTAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR GCA 90 bp AGGCAGAGAGCACTATTTTGCAGATTTGAAAGCAGGCTCAGAACATCAAGCAGCCTCACTGTGTCTTCTTaGTCCTTGAGGAACCTGGCC +
Preference number: 2 (lower is better)
Translates to: RQRALFCRFESRLRTSSSLTVSS*SLRNLA
Trigger: GGCCAGGTTCCTCAAGGAGCAAGAAGACACAGTGAG...GCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAACAGCTGTGTTTGCCTTaGCTGCCTTATTTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWEQLCLP*LPYFSE
Trigger: TTCAGAAAAATAAGGCAGCCAAGGCAAACACAGCTG...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 90 bp TCCTCTGACTGGCTACTCCTAAGAATCCCTCTGCTGTCCACATATTaGCCTATCACAGAGCCAGATCTCTTTTTCCAACTTGCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: SSDWLLLRIPLLSTY*PITEPDLFFQLALE
Trigger: TTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAGAGGGATTCTTAGGAGTAGCCAGTCAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 90 bp TGTCCACATATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACTaGCCCTGGAAGCAGCTGTGTTTGCCTTGGCTGCCTTATTTTTCT +
Preference number: 2 (lower is better)
Translates to: CPHICLSQSQISFSN*PWKQLCLPWLPYFS
Trigger: AGAAAAATAAGGCAGCCAAGGCAAACACAGCTGCTTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR GCA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTATGTGTTTGCCTTGGCTaGCTTATTTTTCTGAAAACA +
Preference number: 2 (lower is better)
Translates to: HDDDTICLSEELLGDAPVCVCLG*LIFLKT
Trigger: TGTTTTCAGAAAAATAAGGCAGCCAAGGCAAACACA...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp GCTGAAGTCTTGACCGGACAGCAAATTCATCCATCCACCTACCTACTGTGTTTAAATAGAGTGGCTACTTaGTGGTCCAAACACTGCACT +
Preference number: 2 (lower is better)
Translates to: AEVLTGQQIHPSTYLLCLNRVAT*WSKHCT
Trigger: AGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATT...TAAACACAGTAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CCA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAATTTTGTGTAGAGGCGTaGAGCCCAAGTCACATTGAG +
Preference number: 2 (lower is better)
Translates to: PPSISRTLSSSQCESVLEFCVEA*SPSHIE
Trigger: CTCAATGTGACTTGGGCTCCACGCCTCTACACAAAA...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 90 bp TGGTCTCTTGCATGGGGAGACAGAGGACGATGTAATAACTATCATTaGTTTAGAGCCTTTCAGCTGACTAAGCTCTTTCCCAGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: WSLAWGDRGRCNNYH*FRAFQLTKLFPRSS
Trigger: AGAACTCCTGGGAAAGAGCTTAGTCAGCTGAAAGGCTCTAAACAAATGATAGTTATTACATCGTCCTCTGTCTCCCCATGCAAGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 90 bp CATATATGTAAAGGCAGGTCAATTAGGAATGTGCTAGCTGAAGTCTaGACCGGACAGCAAATTCATCCATCCACCTACCTACTGTGTTTA +
Preference number: 2 (lower is better)
Translates to: HICKGRSIRNVLAEV*TGQQIHPSTYLLCL
Trigger: TAAACACAGTAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGCTAGCACATTCCTAATTGACCTGCCTTTACATATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR GCA 90 bp AGCAAATTCATCCATCCACCTACCTACTGTGTTTATGTACCAGGCTTGATAAATGACCAGAGTAGGCGCTaGATTCATAGAAGATCAGAT +
Preference number: 2 (lower is better)
Translates to: SKFIHPPTYCVYVPGLINDQSRR*IHRRSD
Trigger: ATCTGATCTTCTATGAATGCAGCGCCTACTCTGGTC...ATTTATCAAGCCTGGTACATAAACACAGTAGGTAGGTGGATGGATGAATTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 72 bp TGGGGAGGCCGCGGGGTGTTGAGACGGATGCTTTGTTaGGCACCACACTGTCTTTGGCCTGCAGGAAGCCGC +
Preference number: 3 (lower is better)
Translates to: WGGRGVLRRMLC*APHCLWPAGSR
Trigger: GCGGCTTCCTGCAGGCCAAAGACAGTGTGGTGCCCAACAAAGCATCCGTCTCAACACCCCGCGGCCTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp CTGTCTTTGGCCTGCAGGAAGCCGCAAGTCGAGCCCTaGATAGTTGTCACGGCAACAGCAGTGCTGAGGCTC +
Preference number: 3 (lower is better)
Translates to: LSLACRKPQVEP*IVVTATAVLRL
Trigger: GAGCCTCAGCACTGCTGTTGCCGTGACAACTATGCAGGGCTCGACTTGCGGCTTCCTGCAGGCCAAAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CAA 90 bp TGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAACTGCTGTCCACATATTaGCCTATCACAGAGCCAGAT +
Preference number: 3 (lower is better)
Translates to: WQAALRGPGGLPAPSRCQLLSTY*PITEPD
Trigger: ATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAG...TTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CAA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTATGGGGCCTCCGGGATTaGTCCCTGTACCCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: HDDDTICLSEELLGDAPVWGLRD*SLYPLV
Trigger: GACCAGGGGGTACAGGGACAAATCCCGGAGGCCCCA...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 72 bp TCTTCCCCACCGCGGAATTGCCCACGAACACAATCTTaGAGAGCCGGTCAGGGGCAGAGGGAGAGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: SSPPRNCPRTQS*RAGQGQRESFP
Trigger: AGGAAAGCTCTCCCTCTGCCCCTGACCGGCTCTTCAAGATTGTGTTCGTGGGCAATTCCGCGGTGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 72 bp TTGCTACTAGTGGCAGCTGGGGAGGCCGCGGGGTGTTaGGACGGATGCTTTGTTGGGCACCACACTGTCTTT +
Preference number: 3 (lower is better)
Translates to: LLLVAAGEAAGC*DGCFVGHHTVF
Trigger: AAAGACAGTGTGGTGCCCAACAAAGCATCCGTCTCAACACCCCGCGGCCTCCCCAGCTGCCACTAGTAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp ACGCTGCTCAGCCACCGCCGGACCGACAGGAACGACTaGTTGTCTGTGAGATCGTACATGACGATGACACCA +
Preference number: 3 (lower is better)
Translates to: TLLSHRRTDRND*LSVRSYMTMTP
Trigger: TGGTGTCATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGGCTGAGCAGCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 72 bp CACACGGTAATCAATGCCCACAGTGGCCGCCATGCCTaGGGAGAACCGGTCCTCACAGAATCTCCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: HTVINAHSGRHA*GEPVLTESPQE
Trigger: TTCCTGAGGAGATTCTGTGAGGACCGGTTCTCCCCAGGCATGGCGGCCACTGTGGGCATTGATTACCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CAA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGATTCCCCACCGCGGAATaGCCCACGAACACAATCTTG +
Preference number: 3 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRFPTAE*PTNTIL
Trigger: CAAGATTGTGTTCGTGGGCAATTCCGCGGTGGGGAA...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp TCTTCACACGGTAATCAATGCCCACAGTGGCCGCCATaGCTGGGGAGAACCGGTCCTCACAGAATCTCCTCA +
Preference number: 3 (lower is better)
Translates to: SSHGNQCPQWPP*LGRTGPHRISS
Trigger: TGAGGAGATTCTGTGAGGACCGGTTCTCCCCAGGCATGGCGGCCACTGTGGGCATTGATTACCGTGTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 72 bp TTGCTCAGGGGTTGCTCAAAGCCACCATCCAGGAGCTaGGGCAGGGGGTCTTCTTCAACGGAGATGATTCTG +
Preference number: 3 (lower is better)
Translates to: LLRGCSKPPSRS*GRGSSSTEMIL
Trigger: CAGAATCATCTCCGTTGAAGAAGACCCCCTGCCCCAGCTCCTGGATGGTGGCTTTGAGCAACCCCTGAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CAA 90 bp AGGCAGAGAGCACTATTTTGCAGATTTGAAAGCAGGCTCAGAACATCAAGCAGCGGAGGCCGCGGGGTGTaGAGACGGATGCTTTGTTGG +
Preference number: 3 (lower is better)
Translates to: RQRALFCRFESRLRTSSSGGRGV*RRMLCW
Trigger: CCAACAAAGCATCCGTCTCAACACCCCGCGGCCTCC...GCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp GAAAGCAGGCTCAGAACATCAAGCAGCTCCAGGTTTTaGCCAGGGCCACACAACTTGTGTGCAGGTCCTTAT +
Preference number: 3 (lower is better)
Translates to: ESRLRTSSSSRF*PGPHNLCAGPY
Trigger: ATAAGGACCTGCACACAAGTTGTGTGGCCCTGGGCAAAACCTGGAGCTGCTTGATGTTCTGAGCCTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 72 bp GTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTaGCTACTTGGTGGTCCAAACACTGCACTGGGGACC +
Preference number: 3 (lower is better)
Translates to: VGACVNGPNIIE*LLGGPNTALGT
Trigger: GGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
3UTR-3UTR CAA 90 bp GCTGAAGTCTTGACCGGACAGCAAATTCATCCATCCACCTACCTACTGTGTTTAGGCACCACACTGTCTTaGGCCTGCAGGAAGCCGCAA +
Preference number: 3 (lower is better)
Translates to: AEVLTGQQIHPSTYLLCLGTTLS*ACRKPQ
Trigger: TTGCGGCTTCCTGCAGGCCAAAGACAGTGTGGTGCC...TAAACACAGTAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CAA 90 bp CAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTGGAAGCAGCTGTGTTaGCCTTGGCTGCCTTATTTT +
Preference number: 3 (lower is better)
Translates to: QNYKVRTLSSVMLGPLSYWKQLC*PWLPYF
Trigger: AAAATAAGGCAGCCAAGGCAAACACAGCTGCTTCCA...GTAGGACAGGGGGCCCAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp TTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACTTaGCCTGGAAGCAGCTGTGTTTGCCTTGGCTGCCTT +
Preference number: 3 (lower is better)
Translates to: FAYHRARSLFPT*PGSSCVCLGCL
Trigger: AAGGCAGCCAAGGCAAACACAGCTGCTTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp CTTGTCTGTGAGATCGTACATGACGATGACACCATCTaGCTTTCTGAAGAACTGCTGGGTGATGCACCGGTA +
Preference number: 3 (lower is better)
Translates to: LVCEIVHDDDTI*LSEELLGDAPV
Trigger: TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATGTACGATCTCACAGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp GCAGGGACTCTTTGGTGTTGTGACCAGAGTAGGCGCTaGATTCATAGAAGATCAGATTGTTCTCCGTGGCAA +
Preference number: 3 (lower is better)
Translates to: AGTLWCCDQSRR*IHRRSDCSPWQ
Trigger: TTGCCACGGAGAACAATCTGATCTTCTATGAATGCAGCGCCTACTCTGGTCACAACACCAAAGAGTCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp TTTCCCAGGAGTTCTCTTTTGACCTTCACACGAGCCTaGGAGGGAGTAAGGCAGAGAGCACTATTTTGCAGA +
Preference number: 3 (lower is better)
Translates to: FPRSSLLTFTRA*EGVRQRALFCR
Trigger: TCTGCAAAATAGTGCTCTCTGCCTTACTCCCTCGCAGGCTCGTGTGAAGGTCAAAAGAGAACTCCTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 72 bp CATCTTTTGTGTAGAGGCGTGGAGCCCAAGTCACATTaGGTTGTTGAGCTGCCTGTGGGTAATGGATTGCTA +
Preference number: 3 (lower is better)
Translates to: HLLCRGVEPKSH*VVELPVGNGLL
Trigger: TAGCAATCCATTACCCACAGGCAGCTCAACAACTCAATGTGACTTGGGCTCCACGCCTCTACACAAAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 72 bp GCTTGTTCCTTTCCCAAACATAATAGAGTGGCTACTTaGTGGTCCAAACACTGCACTGGGGACCAAGGGAAT +
Preference number: 3 (lower is better)
Translates to: ACSFPKHNRVAT*WSKHCTGDQGN
Trigger: ATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGGAAAGGAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CCA 72 bp ATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTaGTGGTCCAAACACTGCACTGGGGACCAAGGGAAT +
Preference number: 3 (lower is better)
Translates to: MCKRTKHNRVAT*WSKHCTGDQGN
Trigger: ATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
3UTR-3UTR CAA 90 bp CATTCAACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCACTCACCTAACAGTTTaGCTGACAATGAACGAGATA +
Preference number: 3 (lower is better)
Translates to: HSTNMNRTQPSYGFPFWPTHLTV*LTMNEI
Trigger: TATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGT...GGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGTTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
3UTR-3UTR CAA 90 bp TACTGTGTTTATGTACCAGGCTTGATAAATACAGAAACAAATGAGACCAGAACTCCCAGGAGTTCTCTTTaGACCTTCACACGAGCCTGC +
Preference number: 3 (lower is better)
Translates to: YCVYVPGLINTETNETRTPRSSL*TFTRAC
Trigger: GCAGGCTCGTGTGAAGGTCAAAAGAGAACTCCTGGG...AGTTCTGGTCTCATTTGTTTCTGTATTTATCAAGCCTGGTACATAAACACAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR GCA 72 bp CAATTCAACGTCATTAAGTATATTCCCAATAGTGTGTaGAACCATCACCACCATCCATCTCCAGAACTCTGT +
Preference number: 3 (lower is better)
Translates to: QFNVIKYIPNSV*NHHHHPSPELC
Trigger: ACAGAGTTCTGGAGATGGATGGTGGTGATGGTTGCACACACTATTGGGAATATACTTAATGACGTTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR TCA 72 bp TGTTTATGTACCAGGCTTGATAAATACAGAAACAAATaGGACCAGAACTACAAGGTAAGAACCTTGTCGTCT +
Preference number: 3 (lower is better)
Translates to: CLCTRLDKYRNK*DQNYKVRTLSS
Trigger: AGACGACAAGGTTCTTACCTTGTAGTTCTGGTCTCATTTGTTTCTGTATTTATCAAGCCTGGTACATAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR-3UTR CAA 90 bp AATGGTAGGACCTCATGTCTAATTTATTTTTGGAGGCTTTACAGAACTCAAAAGGATTTGGCTCCCAAATaGTATCTCATTATTCAGCTA +
Preference number: 3 (lower is better)
Translates to: NGRTSCLIYFWRLYRTQKDLAPK*YLIIQL
Trigger: TAGCTGAATAATGAGATACAATTTGGGAGCCAAATC...CTTTTGAGTTCTGTAAAGCCTCCAAAAATAAATTAGACATGAGGTCCTACCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CCA 90 bp GTTTCAAGGGTGGGGCCTCCGGGATTTGTCCCTGTACCCCCTGGTCAGAGACCTCGGACCCCCAGGCCCTaGCTCCCCGGTTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VSRVGPPGFVPVPPGQRPRTPRP*LPGSWL
Trigger: GAGCCAGGAACCGGGGAGCCAGGGCCTGGGGGTCCG...AGGTCTCTGACCAGGGGGTACAGGGACAAATCCCGGAGGCCCCACCCTTGAAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp AGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGGGGTACGGACCCGCTACTAGTGGCAGCTaGGGAGGCCGCGGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RGSSSTEMILRSGRGYGPATSGS*GGRGVL
Trigger: CAACACCCCGCGGCCTCCCCAGCTGCCACTAGTAGC...GGGTCCGTACCCCCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp TGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGAGGCCGCGGGGTGTTaGGACGGATGCTTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: WQAALRGPGGLPAPSRCQEAAGC*DGCFVG
Trigger: CCCAACAAAGCATCCGTCTCAACACCCCGCGGCCTC...TTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 72 bp CTGGGGAGGCCGCGGGGTGTTGAGACGGATGCTTTGTaGGGCACCACACTGTCTTTGGCCTGCAGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: LGRPRGVETDAL*GTTLSLACRKP
Trigger: CGGCTTCCTGCAGGCCAAAGACAGTGTGGTGCCCAACAAAGCATCCGTCTCAACACCCCGCGGCCTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp AGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGGGGTACGGACCCGGAAATCCAGCTGCTTaGGGAGCCCGGCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: RGSSSTEMILRSGRGYGPGNPAA*GARPSH
Trigger: GTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCC...GGGTCCGTACCCCCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp AGGAGCTGGGGCAGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGCAGGCTTCTGGGAGGTaGTCTCAGCACAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSWGRGSSSTEMILRSGRQASGR*SQHRPV
Trigger: CACTGGCCTGTGCTGAGAGCACCTCCCAGAAGCCTG...CCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCTGCCCCAGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGACAGCTTCCTCCACGCTaGTCAGCCACCGCCGGACCG +
Preference number: 4 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRQLPPR*SATAGP
Trigger: CGGTCCGGCGGTGGCTGAGCAGCGTGGAGGAAGCTG...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGTTCTCCGTGGCAAGCTaGTCTCCGAGGCCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQFSVAS*SPRPRG
Trigger: CCCCCGGGGCCTCGGAGAGCAGCTTGCCACGGAGAA...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp AGGAGCTGGGGCAGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGAATCAATGCCCACAGTaGCCGCCATGCCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RSWGRGSSSTEMILRSGRNQCPQ*PPCLGR
Trigger: TCTCCCCAGGCATGGCGGCCACTGTGGGCATTGATT...CCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCTGCCCCAGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 72 bp CAGCTGGGGAGGCCGCGGGGTGTTGAGACGGATGCTTaGTTGGGCACCACACTGTCTTTGGCCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QLGRPRGVETDA*LGTTLSLACRK
Trigger: CTTCCTGCAGGCCAAAGACAGTGTGGTGCCCAACAAAGCATCCGTCTCAACACCCCGCGGCCTCCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp GTTTCAAGGGTGGGGCCTCCGGGATTTGTCCCTGTACCCCCTGGTCAGAGACCTGGGGACCAAGGGAATTaGGGGCACTCTCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VSRVGPPGFVPVPPGQRPGDQGN*GHSLSR
Trigger: CCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCC...AGGTCTCTGACCAGGGGGTACAGGGACAAATCCCGGAGGCCCCACCCTTGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGAGGCTGTCCAGGGGATaGAGGCAGGCTCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: ALGTKGIEGTLSAGTFFQRLSRG*RQAPLP
Trigger: GGGGAGTGGAGCCTGCCTGCATCCCCTGGACAGCCT...CTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp GGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCGGAAATCCAGCTGCTTaGGGAGCCCGGCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GPNTALGTKGIEGTLSAGGNPAA*GARPSH
Trigger: GTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCC...GCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR TCA 90 bp GTTTCAAGGGTGGGGCCTCCGGGATTTGTCCCTGTACCCCCTGGTCAGAGACCTCCACGAACACAATCTTaGAGAGCCGGTCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: VSRVGPPGFVPVPPGQRPPRTQS*RAGQGQ
Trigger: CTGCCCCTGACCGGCTCTTCAAGATTGTGTTCGTGG...AGGTCTCTGACCAGGGGGTACAGGGACAAATCCCGGAGGCCCCACCCTTGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp TGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGAGCCCAAGTCACATTaGGTTGTTGAGCTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: WQAALRGPGGLPAPSRCQEPKSH*VVELPV
Trigger: CACAGGCAGCTCAACAACTCAATGTGACTTGGGCTC...TTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCACGTGTAGGCTTCCCGTaGACCTGCCCGCGCCGCCCG +
Preference number: 4 (lower is better)
Translates to: VGACVNGPNIIEWLLGGPRVGFP*TCPRRP
Trigger: CGGGCGGCGCGGGCAGGTCCACGGGAAGCCTACACG...TGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
3UTR CAA 72 bp TCTCCGAGGCCCCGGGGGACTTCCCGCTCCTTCTCGTaGTCAAGCTTATTACCCAGCAGAAGAACAGGCACC +
Preference number: 4 (lower is better)
Translates to: SPRPRGTSRSFS*SSLLPSRRTGT
Trigger: GGTGCCTGTTCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGGCCTCGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCGGGGACCAAGGGAATTaGGGGCACTCTCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGGDQGN*GHSLSR
Trigger: CCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCC...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR TCA 90 bp GAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCGGGGAGGTGAGTGACTaGCAAAGAAAAGGACTGGGC +
Preference number: 4 (lower is better)
Translates to: EDQIVLRGKLLSEAPGDFGEVSD*QRKGLG
Trigger: GCCCAGTCCTTTTCTTTGTCAGTCACTCACCTCCCC...GAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCACGGAGAACAATCTGATCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCCAGGGAAATGGGAGGTaGTCTCACCCATGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPNTALGTKGIEGTLSAGQGNGR*SHPWPQ
Trigger: CTGAGGCCATGGGTGAGAGCACCTCCCATTTCCCTG...GCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCCCCAATGGCCCCAGGTaGCTCCGTGCCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GPNIIEWLLGGPNTALGTPNGPR*LRASLL
Trigger: CAGGAGGCTGGCACGGAGCCACCTGGGGCCATTGGG...GGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp GTTTCAAGGGTGGGGCCTCCGGGATTTGTCCCTGTACCCCCTGGTCAGAGACCTTTGCAGGCCTCTTGCTaGAGGCTTTCCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSRVGPPGFVPVPPGQRPLQASC*RLSNCC
Trigger: GCAGCAGTTGGAAAGCCTCCAGCAAGAGGCCTGCAA...AGGTCTCTGACCAGGGGGTACAGGGACAAATCCCGGAGGCCCCACCCTTGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCCTTTCCAACTGCTGCTaGGCATCCTGGAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGLSNCC*ASWSSQ
Trigger: CTGGGAGCTCCAGGATGCTCAGCAGCAGTTGGAAAG...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR TCA 90 bp GAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCGACCTCTTCCTCTTCTaGGCATTTGCTCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: EDQIVLRGKLLSEAPGDFDLFLF*AFAQGL
Trigger: CAACCCCTGAGCAAATGCTCAGAAGAGGAAGAGGTC...GAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCACGGAGAACAATCTGATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCAGTTTGCAGGCCTCTTaGTGGAGGCTTTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: EDQIVLRGKLLSEAPGDFSLQAS*WRLSNC
Trigger: GCAGTTGGAAAGCCTCCAGCAAGAGGCCTGCAAACT...GAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCACGGAGAACAATCTGATCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GTGACCTCAGGTTTGCTGGGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGACACTGTCTTTGGCCTaGAGGAAGCCGCAAGTCGAG +
Preference number: 4 (lower is better)
Translates to: VTSGLLGAVLVGPYQPQQTLSLA*RKPQVE
Trigger: CTCGACTTGCGGCTTCCTGCAGGCCAAAGACAGTGT...CTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCCCAGCAAACCTGAGGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp TCCTCACAGAATCTCCTCAGGAAGGATGTCTTCCCCACCGCGGAATTGCCCACGGGTGAGTTTCAAGGGTaGGGCCTCCGGGATTTGTCC +
Preference number: 4 (lower is better)
Translates to: SSQNLLRKDVFPTAELPTGEFQG*GLRDLS
Trigger: GGACAAATCCCGGAGGCCCCACCCTTGAAACTCACC...CGTGGGCAATTCCGCGGTGGGGAAGACATCCTTCCTGAGGAGATTCTGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACGACAAAGAAAAGGACTaGGCGGGCCCCGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: QNYKVRTLSSVMLGPLSYDKEKD*AGPGGW
Trigger: CCACCCACCGGGGCCCGCCCAGTCCTTTTCTTTGTC...GTAGGACAGGGGGCCCAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GTTTCAAGGGTGGGGCCTCCGGGATTTGTCCCTGTACCCCCTGGTCAGAGACCTGGAGAAGGCACGTGGTaGCTTTTCTGGAAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSRVGPPGFVPVPPGQRPGEGTW*LFWKSP
Trigger: TGGGCTTTTCCAGAAAAGCCACCACGTGCCTTCTCC...AGGTCTCTGACCAGGGGGTACAGGGACAAATCCCGGAGGCCCCACCCTTGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 72 bp ATTGCTACTAGTGGCAGCTGGGGAGGCCGCGGGGTGTaGAGACGGATGCTTTGTTGGGCACCACACTGTCTT +
Preference number: 4 (lower is better)
Translates to: IATSGSWGGRGV*RRMLCWAPHCL
Trigger: AAGACAGTGTGGTGCCCAACAAAGCATCCGTCTCAACACCCCGCGGCCTCCCCAGCTGCCACTAGTAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTGCTGTGGTCAGGGCATaGCCTTGGGCGTGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: YLVVQTLHWGPRELRALSAVVRA*PWACRL
Trigger: AAGCCTACACGCCCAAGGTCATGCCCTGACCACAGC...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp GCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGGCAGCACACCTGTGTTaGATTCTCCTGGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: ALGTKGIEGTLSAGTFFQAAHLC*ILLALL
Trigger: CAGGAGTGCCAGGAGAATTCAACACAGGTGTGCTGC...CTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp GGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGCACGTACCAGTTCCTCCAGGCTaGGCGGTAGCTCCTTATGCA +
Preference number: 4 (lower is better)
Translates to: GTKGIEGTLSAGTFFQHVPVPPG*AVAPYA
Trigger: TGCATAAGGAGCTACCGCTCAGCCTGGAGGAACTGG...TACGTGCTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp CCACCGCCGGACCGACAGGAACGACTGCTTGTCTGTGAGATCGTACATGACGATAGCTGCAGGGCCACCTaGGAGTTGTCCACATTCAAC +
Preference number: 4 (lower is better)
Translates to: PPPDRQERLLVCEIVHDDSCRAT*ELSTFN
Trigger: GTTGAATGTGGACAACTCTCAGGTGGCCCTGCAGCT...ATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp CAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACGAACCTTGTCGTCTGTaGTGCTGGGCCCCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QNYKVRTLSSVMLGPLSYEPCRL*CWAPCP
Trigger: AGGACAGGGGGCCCAGCATCACAGACGACAAGGTTC...GTAGGACAGGGGGCCCAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGTGGCAAGTTGCTGCTaGCCCACCCTTGACAAACAG +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQVASCC*PTLDKQ
Trigger: CTGTTTGTCAAGGGTGGGGCAGCAGCAACTTGCCAC...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCTCCAGCTCTTGACTaGGGGCTTGAAACCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQAPALD*GLETSL
Trigger: CAGAGAGGTTTCAAGCCCGCAGTCAAGAGCTGGAGC...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR GCA 90 bp GCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGCCTTCCAGCCTTTTCTaGTTCTGGGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALGTKGIEGTLSAGTFFQPSSLF*FWVSCS
Trigger: GGAGCAGCTCACCCAGAAGCAGAAAAGGCTGGAAGG...CTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR GCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGCTTAGGAAATCCAGCTaGTTGAGGAGCCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQLRKSS*LRSPAF
Trigger: GAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAG...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR GCA 90 bp GAGGGAGAGCTTTCCTCCTTACACAGGGCTTCTTTTCCAACAGGCTGCCCTCGGCTTAGGAAATCCAGCTaGTTGAGGAGCCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EGELSSLHRASFPTGCPRLRKSS*LRSPAF
Trigger: GAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAG...CCGAGGGCAGCCTGTTGGAAAAGAAGCCCTGTGTAAGGAGGAAAGCTCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGCCGCAAGTCGAGCCCTaGATAGTTGTCACGGCAACA +
Preference number: 4 (lower is better)
Translates to: ALGTKGIEGTLSAGTFFQPQVEP*IVVTAT
Trigger: TGTTGCCGTGACAACTATGCAGGGCTCGACTTGCGG...CTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GAGTGGGGCAGAGCCTCCCCACCAGGAGGAATAAACTGGATGTGGGCGCATGTGAGTAGTGAACTCCTGTaGGGTCAGATAGCCATTGCC +
Preference number: 4 (lower is better)
Translates to: EWGRASPPGGINWMWAHVSSELL*GQIAIA
Trigger: GGCAATGGCTATCTGACCCCACAGGAGTTCACTACT...CACATGCGCCCACATCCAGTTTATTCCTCCTGGTGGGGAGGCTCTGCCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGATCAGCATCCGGAACTaGGCTTCCTCATCTTCGCCC +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQISIRN*ASSSSP
Trigger: GGGCGAAGATGAGGAAGCCCAGTTCCGGATGCTGAT...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGAAGCCTTTTCTGCTTCTaGGTGAGCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRSLFCF*VSCSSS
Trigger: GGAGCTGGAGCAGCTCACCCAGAAGCAGAAAAGGCT...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp AGGAGCTGGGGCAGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGAATAGAGTGGCTACTTaGTGGTCCAAACACTGCACT +
Preference number: 4 (lower is better)
Translates to: RSWGRGSSSTEMILRSGRNRVAT*WSKHCT
Trigger: AGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATT...CCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCTGCCCCAGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CCACCGCCGGACCGACAGGAACGACTGCTTGTCTGTGAGATCGTACATGACGATCAGGGAGCTTCTCCTTaGGATGCCAAACACCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPPDRQERLLVCEIVHDDQGASP*DAKHLL
Trigger: GAGGAGGTGTTTGGCATCCCAAGGAGAAGCTCCCTG...ATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGAAGGAACCTGGCCAGATaGAGCAGGGACTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRRNLAR*SRDSLV
Trigger: CACCAAAGAGTCCCTGCTCCATCTGGCCAGGTTCCT...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGAGGTGGCCGACCTGAATaGTGTCCTCTCTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRGGRPE*CPLSLC
Trigger: ACACAGTGAGAGAGGACACCATTCAGGTCGGCCACC...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCTTCTGGTCTCTTGCATaGGGAGACAGAGGACGATGT +
Preference number: 4 (lower is better)
Translates to: EDQIVLRGKLLSEAPGDFFWSLA*GDRGRC
Trigger: ACATCGTCCTCTGTCTCCCCATGCAAGAGACCAGAA...GAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCACGGAGAACAATCTGATCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 72 bp CTGCTCAGCCACCGCCGGACCGACAGGAACGACTGCTaGTCTGTGAGATCGTACATGACGATGACACCATCT +
Preference number: 4 (lower is better)
Translates to: LLSHRRTDRNDC*SVRSYMTMTPS
Trigger: AGATGGTGTCATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGGCTGAGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp ACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTCCGTGCCAGCCTCCTaGAGGGCAGCTGTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TGCGRMCKRTKHNRVATWSVPAS*RAAVVR
Trigger: CCTGACCACAGCTGCCCTTCAGGAGGCTGGCACGGA...CCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp GCAGGATTTCTTCTTAGCAGGGTGGCCGACCTGAATGGTGTCCTCTCTCACTGTGCACGTAGGCAAGGATaGCCCTCAGACTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: AGFLLSRVADLNGVLSHCARRQG*PSDWSF
Trigger: GAAGGACCAGTCTGAGGGTCATCCTTGCCTACGTGC...ACAGTGAGAGAGGACACCATTCAGGTCGGCCACCCTGCTAAGAAGAAATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTGCTCCTCGGAGGACCTaGAACTCTTCACACCTGGAG +
Preference number: 4 (lower is better)
Translates to: YLVVQTLHWGPRELRALSAPRRT*NSSHLE
Trigger: CTCCAGGTGTGAAGAGTTGCAGGTCCTCCGAGGAGC...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCTCCTCCTTCTTCAGCTaGAACCAGAGCTGCTTGACA +
Preference number: 4 (lower is better)
Translates to: GPNTALGTKGIEGTLSAGSSFFS*NQSCLT
Trigger: TGTCAAGCAGCTCTGGTTGCAGCTGAAGAAGGAGGA...GCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGCATGATGCAGGGCTGTaGACTGACCTTCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQHDAGL*TDLPAF
Trigger: AAAGGCTGGAAGGTCAGTGCACAGCCCTGCATCATG...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR GCA 90 bp AGAGTAGGCGCTGCATTCATAGAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCCTCAGCACAGGCCAGTaGCCACCGACGCACCTTAGG +
Preference number: 4 (lower is better)
Translates to: RVGAAFIEDQIVLRGKLLLSTGQ*PPTHLR
Trigger: CCTAAGGTGCGTCGGTGGGCACTGGCCTGTGCTGAG...GAGCAGCTTGCCACGGAGAACAATCTGATCTTCTATGAATGCAGCGCCTACTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGTGGTGGTCCAAACACTaGACTGGGGACCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQWWSKH*TGDQGN
Trigger: ATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCA...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR GCA 90 bp GCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGGCCTTTCTGAAGAACTaGTGGGTGATGCACCGGTAC +
Preference number: 4 (lower is better)
Translates to: ALGTKGIEGTLSAGTFFQAFLKN*WVMHRY
Trigger: GTACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGC...CTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp AGGAGCTGGGGCAGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGCAGAGAGCACTATTTTaGAGATTTGAAAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RSWGRGSSSTEMILRSGRQRALF*RFESRL
Trigger: GAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTG...CCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCTGCCCCAGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GAGGGAGAGCTTTCCTCCTTACACAGGGCTTCTTTTCCAACAGGCTGCCCTCGGTGGGCTTCTTGGAGCTaGGAGATGATTCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EGELSSLHRASFPTGCPRWASWS*EMILVR
Trigger: CCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCA...CCGAGGGCAGCCTGTTGGAAAAGAAGCCCTGTGTAAGGAGGAAAGCTCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCATCTCCTTCTCTTGGTaGAGTTTGCAGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: GPNTALGTKGIEGTLSAGISFSW*SLQASC
Trigger: GCAAGAGGCCTGCAAACTCCACCAAGAGAAGGAGAT...GCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR CCA 90 bp CTCTGTGACCTCAGGTTTGCTGGGGGCAGTCCTTGTAGGACCCTATCAGCCACAGTCCAAACACTGCACTaGGGACCAAGGGAATTGAGG +
Preference number: 4 (lower is better)
Translates to: LCDLRFAGGSPCRTLSATVQTLH*GPRELR
Trigger: CCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGAC...TGTGGCTGATAGGGTCCTACAAGGACTGCCCCCAGCAAACCTGAGGTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTACCACCATCCAGGAGCTaGGGCAGGGGGTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HDDDTICLSEELLGDAPVPPSRS*GRGSSS
Trigger: TGAAGAAGACCCCCTGCCCCAGCTCCTGGATGGTGG...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGGATTTCTTCTTAGCAGGGTCAGATTGTTCTCCGTaGCAAGCTGCTCTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GAVLVGPYQPQQDFFLAGSDCSP*QAALRG
Trigger: GCCTCGGAGAGCAGCTTGCCACGGAGAACAATCTGA...CCCTGCTAAGAAGAAATCCTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAAGCGGGCCCCGGTGGGTaGCATCTGTGCAGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: PPSISRTLSSSQCESVLEAGPGG*HLCRSR
Trigger: ACGGCTCCTGCACAGATGCCACCCACCGGGGCCCGC...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAAGCACCACACTGTCTTTaGCCTGCAGGAAGCCGCAAG +
Preference number: 4 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWEAPHCL*PAGSRK
Trigger: CTTGCGGCTTCCTGCAGGCCAAAGACAGTGTGGTGC...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGAGGTGCTCTCACCCATaGCCTCAGCCTTTCCAGTTA +
Preference number: 4 (lower is better)
Translates to: ALGTKGIEGTLSAGTFFQRCSHP*PQPFQL
Trigger: TAACTGGAAAGGCTGAGGCCATGGGTGAGAGCACCT...CTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 72 bp AATCTCCTCAGGAAGGATGTCTTCCCCACCGCGGAATaGCCCACGAACACAATCTTGAAGAGCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: NLLRKDVFPTAE*PTNTILKSRSG
Trigger: CCCTGACCGGCTCTTCAAGATTGTGTTCGTGGGCAATTCCGCGGTGGGGAAGACATCCTTCCTGAGGAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp GTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCACCCGACGTTTGCTCCTaGGTCTCCTTCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VGACVNGPNIIEWLLGGPPDVCS*VSFCSR
Trigger: CCTGGAGCAGAAGGAGACTCAGGAGCAAACGTCGGG...TGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp AGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGGGGTACGGACCCGCTGCCTTATTTTTCTaGAAACATATGTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: RGSSSTEMILRSGRGYGPAALFF*KHMSRS
Trigger: TGAACGGGACATATGTTTTCAGAAAAATAAGGCAGC...GGGTCCGTACCCCCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGAGGAGAGAAAAGACTCTaGGATGCTCCAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRGEKRL*DAPRAA
Trigger: AGCTGCTCTTGGAGCATCTCAGAGTCTTTTCTCTCC...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp AGGAGGAATAAACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGCCCCAGGTGGCTCCGTaGCAGCCTCCTGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RRNKLDVGACVNGPNIIEPQVAP*QPPEGQ
Trigger: CTGCCCTTCAGGAGGCTGGCACGGAGCCACCTGGGG...CTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGTTTATTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCTTTTCTTGTGCTAAGTaGCCAGTGGAGGCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGFSCAK*PVEALA
Trigger: AGCCAGAGCCTCCACTGGGCACTTAGCACAAGAAAA...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGCACGTATCTTTTTCAGAACCTTaGAGCTCCCGGCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: GTKGIEGTLSAGTFFQHVSFSEP*SSRLLG
Trigger: TCCGAGGAGCCGGGAGCTGCAAGGTTCTGAAAAAGA...TACGTGCTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GAGTGGGGCAGAGCCTCCCCACCAGGAGGAATAAACTGGATGTGGGCGCATGTGAGCTGCAACCAGAGCTaGTTGACATCACTTTCATCT +
Preference number: 4 (lower is better)
Translates to: EWGRASPPGGINWMWAHVSCNQS*LTSLSS
Trigger: AGATGAAAGTGATGTCAAGCAGCTCTGGTTGCAGCT...CACATGCGCCCACATCCAGTTTATTCCTCCTGGTGGGGAGGCTCTGCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp ACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCATCAGCTCAGCACAGGCCAGTaGCCACCGACGCACCTTAGG +
Preference number: 4 (lower is better)
Translates to: TNMNRTQPSYGFPFWPHQLSTGQ*PPTHLR
Trigger: CCTAAGGTGCGTCGGTGGGCACTGGCCTGTGCTGAG...CTGATGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGGATTTCTTCTTAGCAGGGCATTTGCTCAGGGGTTaGTCAAAGCCACCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GAVLVGPYQPQQDFFLAGHLLRG*SKPPSR
Trigger: CCTGGATGGTGGCTTTGAGCAACCCCTGAGCAAATG...CCCTGCTAAGAAGAAATCCTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp CCACCGCCGGACCGACAGGAACGACTGCTTGTCTGTGAGATCGTACATGACGATACCGACAGGAACGACTaGTTGTCTGTGAGATCGTAC +
Preference number: 4 (lower is better)
Translates to: PPPDRQERLLVCEIVHDDTDRND*LSVRSY
Trigger: GTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGT...ATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGAGACGGATGCTTTGTTaGGCACCACACTGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: ALGTKGIEGTLSAGTFFQRRMLC*APHCLW
Trigger: CCAAAGACAGTGTGGTGCCCAACAAAGCATCCGTCT...CTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCTACTTTGGCCACTGGTaGCTTGAATTCCACCATCAG +
Preference number: 4 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGYFGHW*LEFHHQ
Trigger: CTGATGGTGGAATTCAAGTCACCAGTGGCCAAAGTA...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp GTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAGCACGTAGGCAAGGATaGCCCTCAGACTGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VGACVNGPNIIEWLLGGPARRQG*PSDWSF
Trigger: GAAGGACCAGTCTGAGGGTCATCCTTGCCTACGTGC...TGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTAGAGTGGCAAGTTGCTaGTGCCCCACCCTTGACAAA +
Preference number: 4 (lower is better)
Translates to: YLVVQTLHWGPRELRALSRVASC*CPTLDK
Trigger: TTTGTCAAGGGTGGGGCAGCAGCAACTTGCCACTCT...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCATCAGCAAGACTCCTGTaGAGCCACACACCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VGACVNGPNIIEWLLGGPSARLL*SHTPGR
Trigger: CCTGCCAGGTGTGTGGCTGCACAGGAGTCTTGCTGA...TGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTGGCCACCTGTTCACCTaGATCTTCCTGACTTGGGTT +
Preference number: 4 (lower is better)
Translates to: YLVVQTLHWGPRELRALSGHLFT*IFLTWV
Trigger: AACCCAAGTCAGGAAGATGCAGGTGAACAGGTGGCC...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGAGCTGCTCCAGCTCCTaGTCCTTACATAACAGTTTC +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQSCSSS*SLHNSF
Trigger: GAAACTGTTATGTAAGGAGCAGGAGCTGGAGCAGCT...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR GCA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTACCTTCCAGCCTTTTCTaGTTCTGGGTGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HDDDTICLSEELLGDAPVPSSLF*FWVSCS
Trigger: GGAGCAGCTCACCCAGAAGCAGAAAAGGCTGGAAGG...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAATCTCCTGATGGGATGTaGTTCCCTTCCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWESPDGM*FPSFWG
Trigger: CCCCCAAAAGGAAGGGAAGCACATCCCATCAGGAGA...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTGCAACTCTTCACACCTaGAGGGTACTTTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: YLVVQTLHWGPRELRALSATLHT*RVLWPL
Trigger: CAGTGGCCAAAGTACCCTCCAGGTGTGAAGAGTTGC...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGTCTTCCAACACCTTTTaGGCTCCAAGTCTGTCCATC +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQSSNTF*APSLSI
Trigger: GATGGACAGACTTGGAGCCCAAAAGGTGTTGGAAGA...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTATCCCGGGCCAGCTCCTaGTTAGTGAGTTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HDDDTICLSEELLGDAPVSRASS*LVSFSL
Trigger: CAAGCTGAAACTCACTAACCAGGAGCTGGCCCGGGA...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCTTTTCCAACTTGCCCTaGAAGCAGCTGTGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGFSNLP*KQLCLP
Trigger: AGGCAAACACAGCTGCTTCCAGGGCAAGTTGGAAAA...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTGGTGGCTTTTCTaGAAAAGCCCATCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GPNTALGTKGIEGTLSAGTWWLF*KSPSVS
Trigger: AGAAACAGATGGGCTTTTCCAGAAAAGCCACCACGT...GCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACCGTGGAGAAGGCACGTaGTGGCTTTTCTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QNYKVRTLSSVMLGPLSYRGEGT*WLFWKS
Trigger: GCTTTTCCAGAAAAGCCACCACGTGCCTTCTCCACG...GTAGGACAGGGGGCCCAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CCACCGCCGGACCGACAGGAACGACTGCTTGTCTGTGAGATCGTACATGACGATTTTTGTGTAGAGGCGTaGAGCCCAAGTCACATTGAG +
Preference number: 4 (lower is better)
Translates to: PPPDRQERLLVCEIVHDDFCVEA*SPSHIE
Trigger: CTCAATGTGACTTGGGCTCCACGCCTCTACACAAAA...ATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp AGGAGGAATAAACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGCTGCTGCCCCACCCTTaGCAAACAGCCCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: RRNKLDVGACVNGPNIIELLPHP*QTAQWP
Trigger: GGGCCATTGGGCTGTTTGTCAAGGGTGGGGCAGCAG...CTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGTTTATTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTACTCCTCCTCCTCCTCTaGCTGGCTACTCCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: HDDDTICLSEELLGDAPVLLLLL*LATPKN
Trigger: ATTCTTAGGAGTAGCCAGTCAGAGGAGGAGGAGGAG...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp TCCCTCTGCTGTCCACATATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACCTTCTTCAACGGAGATaGTTCTGCGGAGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SLCCPHICLSQSQISFSNLLQRR*FCGAAG
Trigger: CCCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAG...GTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTTCCTTATGCAGCCTCTaGATATCCTTCCTGGCGATG +
Preference number: 4 (lower is better)
Translates to: YLVVQTLHWGPRELRALSSLCSL*ISFLAM
Trigger: CATCGCCAGGAAGGATATGCAGAGGCTGCATAAGGA...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp GGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGCACGTAGACGATGACACCATCTaGCTTTCTGAAGAACTGCTG +
Preference number: 4 (lower is better)
Translates to: GTKGIEGTLSAGTFFQHVDDDTI*LSEELL
Trigger: CAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTC...TACGTGCTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp CCACCGCCGGACCGACAGGAACGACTGCTTGTCTGTGAGATCGTACATGACGATGACCAGAGTAGGCGCTaGATTCATAGAAGATCAGAT +
Preference number: 4 (lower is better)
Translates to: PPPDRQERLLVCEIVHDDDQSRR*IHRRSD
Trigger: ATCTGATCTTCTATGAATGCAGCGCCTACTCTGGTC...ATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCATTCCCAATAGTGTGTaGAACCATCACCACCATCCA +
Preference number: 4 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGIPNSV*NHHHHP
Trigger: TGGATGGTGGTGATGGTTGCACACACTATTGGGAAT...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp TTCAACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCACCTGAAGGGCAGCTGTaGTCAGGGCATGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: FNKHEQNTAELRISILAPPEGQL*SGHDLG
Trigger: CCCAAGGTCATGCCCTGACCACAGCTGCCCTTCAGG...TGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGCTCATGGAGGAAGAGTaGCAAGTTGCTGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVLMEEE*QVAAAP
Trigger: TGGGGCAGCAGCAACTTGCCACTCTTCCTCCATGAG...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp ACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCATCAGAGTGGAGGCTCTGGCTaGGCTCATGGAGGAAGAGTG +
Preference number: 4 (lower is better)
Translates to: TNMNRTQPSYGFPFWPHQSGGSG*AHGGRV
Trigger: CACTCTTCCTCCATGAGCCCAGCCAGAGCCTCCACT...CTGATGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp ACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCATCAGCAAGTCTCTGGGGTCTaGAGACTACCCTCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: TNMNRTQPSYGFPFWPHQQVSGV*RLPSRQ
Trigger: CTGACGGGAGGGTAGTCTCCAGACCCCAGAGACTTG...CTGATGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGTTCTCTTCATGGCGCTaGGCCACCTGTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVFSSWR*ATCSPA
Trigger: TGCAGGTGAACAGGTGGCCCAGCGCCATGAAGAGAA...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGAGCCTTTTCTGCTTCTaGGTGAGCTGCTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVSLFCF*VSCSSS
Trigger: GGAGCTGGAGCAGCTCACCCAGAAGCAGAAAAGGCT...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp GTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCATCCCGGGCCAGCTCCTaGTTAGTGAGTTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: VGACVNGPNIIEWLLGGPSRASS*LVSFSL
Trigger: CAAGCTGAAACTCACTAACCAGGAGCTGGCCCGGGA...TGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAATTTCTGAAGAACTGCTaGGTGATGCACCGGTACCTC +
Preference number: 4 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWEFLKNC*VMHRYL
Trigger: GAGGTACCGGTGCATCACCCAGCAGTTCTTCAGAAA...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTAGGAGCAGGGACTCTTTaGTGTTGTGACCAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: HDDDTICLSEELLGDAPVGAGTL*CCDQSR
Trigger: CCTACTCTGGTCACAACACCAAAGAGTCCCTGCTCC...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp TGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAAACACTGCATCCTGGCACTCCTGCTaGATCCCAGCGCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: CVNGPNIIEWLLGGPNTASWHSC*IPALWI
Trigger: GATCCAGAGCGCTGGGATTCAGCAGGAGTGCCAGGA...TGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp GGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCTGGCCACTGGTGACTTaGATTCCACCATCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GPNIIEWLLGGPNTALGTWPLVT*IPPSAR
Trigger: TCTTGCTGATGGTGGAATTCAAGTCACCAGTGGCCA...GGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp CAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACAGCTGCTCCAGCTCCTaGTCCTTACATAACAGTTTC +
Preference number: 4 (lower is better)
Translates to: QNYKVRTLSSVMLGPLSYSCSSS*SLHNSF
Trigger: GAAACTGTTATGTAAGGAGCAGGAGCTGGAGCAGCT...GTAGGACAGGGGGCCCAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp CAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACCGTTCATCCCGAAGGTaGTTGTTCCTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: QNYKVRTLSSVMLGPLSYRSSRR*LFLSQT
Trigger: TGTTTGGGAAAGGAACAAGCACCTTCGGGATGAACG...GTAGGACAGGGGGCCCAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GGAAGCATCTTTTGTGTAGAGGCGTGGAGCCCAAGTCACATTGAGTTGTTGAGCCTCACTGTGTCTTCTTaGTCCTTGAGGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSIFCVEAWSPSHIELLSLTVSS*SLRNLA
Trigger: GGCCAGGTTCCTCAAGGAGCAAGAAGACACAGTGAG...GCTCAACAACTCAATGTGACTTGGGCTCCACGCCTCTACACAAAAGATGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGTGCATCTTCCTGACTTaGGTTATTCTGGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQCIFLT*VILAEE
Trigger: TTCTTCAGCCAGAATAACCCAAGTCAGGAAGATGCA...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp GTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCATACACCTTCTCTTCATaGCGCTGGGCCACCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VGACVNGPNIIEWLLGGPYTFSS*RWATCS
Trigger: TGAACAGGTGGCCCAGCGCCATGAAGAGAAGGTGTA...TGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp CCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAAGCTTATTACCCAGCAGAAGATGGTATTCTCAGCCTTaGTCTCATGCTTGTCATGAT +
Preference number: 4 (lower is better)
Translates to: PRGTSRSFSLSSLLPSRRWYSQP*SHACHD
Trigger: ATCATGACAAGCATGAGACCAAGGCTGAGAATACCA...TCTTCTGCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp ACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTTGCAGGCCTCTTGCTaGAGGCTTTCCAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGCGRMCKRTKHNRVATWLQASC*RLSNCC
Trigger: GCAGCAGTTGGAAAGCCTCCAGCAAGAGGCCTGCAA...CCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp GAGGGAGAGCTTTCCTCCTTACACAGGGCTTCTTTTCCAACAGGCTGCCCTCGGCCAAACATAATAGAGTaGCTACTTGGTGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: EGELSSLHRASFPTGCPRPNIIE*LLGGPN
Trigger: GTTTGGACCACCAAGTAGCCACTCTATTATGTTTGG...CCGAGGGCAGCCTGTTGGAAAAGAAGCCCTGTGTAAGGAGGAAAGCTCTCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 72 bp TTTCAGCTGACTAAGCTCTTTCCCAGGAGTTCTCTTTaGACCTTCACACGAGCCTGCGAGGGAGTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FQLTKLFPRSSL*TFTRACEGVRQ
Trigger: CTGCCTTACTCCCTCGCAGGCTCGTGTGAAGGTCAAAAGAGAACTCCTGGGAAAGAGCTTAGTCAGCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGTCACCTGCATCTTCCTaGCTTGGGTTATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVSPASS*LGLFWL
Trigger: CAGCCAGAATAACCCAAGTCAGGAAGATGCAGGTGA...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGACTATTTTGCAGATTTaGAAGCAGGCTCAGAACATC +
Preference number: 4 (lower is better)
Translates to: VVQTLHWGPRELRALSQQTILQI*KQAQNI
Trigger: GATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGT...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGAGCGGTAGCTCCTTATaGAGCCTCTGCATATCCTTC +
Preference number: 4 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVSGSSL*SLCISF
Trigger: GAAGGATATGCAGAGGCTGCATAAGGAGCTACCGCT...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAAGGAAGCAGCTGTGTTTaGCTTGGCTGCCTTATTTTT +
Preference number: 4 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWEGSSCV*LGCLIF
Trigger: AAAAATAAGGCAGCCAAGGCAAACACAGCTGCTTCC...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp ACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTCAAAACAGAGTGGGAATGCTGTCCACATATTTaGCTATCACAGAGCCAGATC +
Preference number: 4 (lower is better)
Translates to: TLSSVMLGPLSYFKTEWECCPHI*LSQSQI
Trigger: GATCTGGCTCTGTGATAGGCAAATATGTGGACAGCA...TTCCCACTCTGTTTTGAAGTAGGACAGGGGGCCCAGCATCACAGACGACAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp CCACATATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACTTGCCCTGGAAGAGCAGCTCCAGGTTTTaGCCAGGGCCACACAACTTG +
Preference number: 4 (lower is better)
Translates to: PHICLSQSQISFSNLPWKSSSRF*PGPHNL
Trigger: CAAGTTGTGTGGCCCTGGGCAAAACCTGGAGCTGCT...CTTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCGAGAAAGCTTTTTCTTaGTGCTCTGTTTGTGATTCA +
Preference number: 4 (lower is better)
Translates to: GPNTALGTKGIEGTLSAGEKAFS*CSVCDS
Trigger: TGAATCACAAACAGAGCACCAAGAAAAAGCTTTCTC...GCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp GGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGGCACGTTTTTCCAGCACGTACAGCTGTGTTTGCCTTaGCTGCCTTATTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: GTKGIEGTLSAGTFFQHVQLCLP*LPYFSE
Trigger: TTCAGAAAAATAAGGCAGCCAAGGCAAACACAGCTG...TACGTGCTGGAAAAACGTGCCTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 72 bp ATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACTaGCCCTGGAAGCAGCTGTGTTTGCCTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ICLSQSQISFSN*PWKQLCLPWLP
Trigger: AGGCAGCCAAGGCAAACACAGCTGCTTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp CATTCAACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCTATCCTTCCTGGCGATaGAGCCCTTGCCTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HSTNMNRTQPSYGFPFWPYPSWR*SPCLQH
Trigger: ATGCTGAAGGCAAGGGCTTCATCGCCAGGAAGGATA...GGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGTTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp GGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGGATTTCTTCTTAGCAGGGGTCATCATCCCAGTGTaGAAGTGTTTTAGAAACCAT +
Preference number: 4 (lower is better)
Translates to: GAVLVGPYQPQQDFFLAGVIIPV*KCFRNH
Trigger: ATGGTTTCTAAAACACTTTCACACTGGGATGATGAC...CCCTGCTAAGAAGAAATCCTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp AGGAGGAATAAACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGGCTCCAGCTCTTGACTaGGGGCTTGAAACCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RRNKLDVGACVNGPNIIEAPALD*GLETSL
Trigger: CAGAGAGGTTTCAAGCCCGCAGTCAAGAGCTGGAGC...CTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGTTTATTCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp TCCCTCTGCTGTCCACATATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACCATGATGCAGGGCTGTaGACTGACCTTCCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: SLCCPHICLSQSQISFSNHDAGL*TDLPAF
Trigger: AAAGGCTGGAAGGTCAGTGCACAGCCCTGCATCATG...GTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp TTCAACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCAAGTTTGCAGGCCTCTTaGTGGAGGCTTTCCAACTGC +
Preference number: 4 (lower is better)
Translates to: FNKHEQNTAELRISILAPSLQAS*WRLSNC
Trigger: GCAGTTGGAAAGCCTCCAGCAAGAGGCCTGCAAACT...TGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp TCAATCAATCCATTCCATTCTGAGGAACCAACAGGCCAACCACTATTGCAGAGACTTAGGAAATCCAGCTaGTTGAGGAGCCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SINPFHSEEPTGQPLLQRLRKSS*LRSPAF
Trigger: GAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAG...TCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR GCA 90 bp GAGGGAGAGCTTTCCTCCTTACACAGGGCTTCTTTTCCAACAGGCTGCCCTCGGTGTGTTTGCCTTGGCTaGCTTATTTTTCTGAAAACA +
Preference number: 4 (lower is better)
Translates to: EGELSSLHRASFPTGCPRCVCLG*LIFLKT
Trigger: TGTTTTCAGAAAAATAAGGCAGCCAAGGCAAACACA...CCGAGGGCAGCCTGTTGGAAAAGAAGCCCTGTGTAAGGAGGAAAGCTCTCCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp GCTGAAGTCTTGACCGGACAGCAAATTCATCCATCCACCTACCTACTGTGTTTAAGCTTCTCCTTGGGATaGCAAACACCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AEVLTGQQIHPSTYLLCLSFSLG*QTPPPP
Trigger: AGGAGGAGGAGGTGTTTGGCATCCCAAGGAGAAGCT...TAAACACAGTAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp GTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAGATCCTCATCCCCTCTaGACAGATACACCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: VGACVNGPNIIEWLLGGPDPHPL*TDTPSL
Trigger: AAGAGAAGGTGTATCTGTCCAGAGGGGATGAGGATC...TGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp TTCAACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCACTTGGAGCTGGGAGATaGTTCTGGTCAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: FNKHEQNTAELRISILAPLGAGR*FWSGSL
Trigger: AAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAG...TGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp CCACATATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACTTGCCCTGGAAGCTTGGAGCTGGGAGATaGTTCTGGTCAGGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: PHICLSQSQISFSNLPWKLGAGR*FWSGSL
Trigger: AAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAG...CTTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp TGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAAACACTGCACCAGCTCTGCTCGCATaGGATCAAGTACCAAGCACA +
Preference number: 4 (lower is better)
Translates to: CVNGPNIIEWLLGGPNTAPALLA*DQVPST
Trigger: TGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGG...TGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp AGCAAATTCATCCATCCACCTACCTACTGTGTTTATGTACCAGGCTTGATAAATGCTAGAGGAAGCCGCTaGGAGAGCCACAGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SKFIHPPTYCVYVPGLINARGSR*ESHSWV
Trigger: TACCCAGCTGTGGCTCTCTCAGCGGCTTCCTCTAGC...ATTTATCAAGCCTGGTACATAAACACAGTAGGTAGGTGGATGGATGAATTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTTCCTTCAGGAGAAACTaGTCCTTCTCACTTTTGATT +
Preference number: 4 (lower is better)
Translates to: YLVVQTLHWGPRELRALSSFRRN*SFSLLI
Trigger: AATCAAAAGTGAGAAGGAGCAGTTTCTCCTGAAGGA...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR GCA 90 bp TGCCCTACTCACCTAACAGTTTTGCTGACAATGAACGAGATAATATTTCTAGCACAGGCTTCTGGGAGGTaGTCTCAGCACAGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: CPTHLTVLLTMNEIIFLAQASGR*SQHRPV
Trigger: CACTGGCCTGTGCTGAGAGCACCTCCCAGAAGCCTG...TGCTAGAAATATTATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGTAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp AGCAAATTCATCCATCCACCTACCTACTGTGTTTATGTACCAGGCTTGATAAATGGTGGGTGGCATCTGTaGAGGAGCCGTGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SKFIHPPTYCVYVPGLINGGWHL*RSRVQD
Trigger: ATCCTGCACACGGCTCCTGCACAGATGCCACCCACC...ATTTATCAAGCCTGGTACATAAACACAGTAGGTAGGTGGATGGATGAATTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp AGGAGGAATAAACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGGCTTCTTGGAGCTaGGAGATGATTCTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RRNKLDVGACVNGPNIIEWASWS*EMILVR
Trigger: CCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCA...CTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGTTTATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp AGGAGGAATAAACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGGTCCAAACACTGCACTaGGGACCAAGGGAATTGAGG +
Preference number: 4 (lower is better)
Translates to: RRNKLDVGACVNGPNIIEVQTLH*GPRELR
Trigger: CCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGAC...CTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGTTTATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp TGCCCTACTCACCTAACAGTTTTGCTGACAATGAACGAGATAATATTTCTAGCAGTGCCTTCCTCAGCATaGCTAGCTGGCCCGACGTTT +
Preference number: 4 (lower is better)
Translates to: CPTHLTVLLTMNEIIFLAVPSSA*LAGPTF
Trigger: AAACGTCGGGCCAGCTAGTCATGCTGAGGAAGGCAC...TGCTAGAAATATTATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp TGCCCTACTCACCTAACAGTTTTGCTGACAATGAACGAGATAATATTTCTAGCAGGAAGAGTGGCAAGTTaGTGCTGCCCCACCCTTGAC +
Preference number: 4 (lower is better)
Translates to: CPTHLTVLLTMNEIIFLAGRVAS*CCPTLD
Trigger: GTCAAGGGTGGGGCAGCAGCAACTTGCCACTCTTCC...TGCTAGAAATATTATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGTAGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp AGGAGGAATAAACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTCTGGATCCGGCTCCTaGAGGGTTTTTCTTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RRNKLDVGACVNGPNIIESGSGS*RVFLVL
Trigger: TAGCACAAGAAAAACCCTGCAGGAGCCGGATCCAGA...CTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGTTTATTCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp CAATCAATCCATTCCATTCTGAGGAACCAACAGGCCAACCACTATTGCAGAGATCGTTCATCCCGAAGGTaGTTGTTCCTTTCCCTTAGG +
Preference number: 4 (lower is better)
Translates to: QSIHSILRNQQANHYCRDRSSRR*LFLSLR
Trigger: CCTAAGGGAAAGGAACAAGCACCTTCGGGATGAACG...ATCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CCA 90 bp ACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGAATAGAGTGGCTACTTaGTGGTCCAAACACTGCACT +
Preference number: 4 (lower is better)
Translates to: TGCGRMCKRTKHNRVATWNRVAT*WSKHCT
Trigger: AGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATT...CCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGCCAAACATAATAGAGTaGCTACTTGGTGGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVPNIIE*LLGGPN
Trigger: GTTTGGACCACCAAGTAGCCACTCTATTATGTTTGG...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAATCCTCCTCCTCTGACTaGCTACTCCTAAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: PPSISRTLSSSQCESVLESSSSD*LLLRIP
Trigger: AGGGATTCTTAGGAGTAGCCAGTCAGAGGAGGAGGA...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp TACTGTGTTTATGTACCAGGCTTGATAAATACAGAAACAAATGAGACCAGAACTAGTGGCCGCCATGCCTaGGGAGAACCGGTCCTCACA +
Preference number: 4 (lower is better)
Translates to: YCVYVPGLINTETNETRTSGRHA*GEPVLT
Trigger: TGTGAGGACCGGTTCTCCCCAGGCATGGCGGCCACT...AGTTCTGGTCTCATTTGTTTCTGTATTTATCAAGCCTGGTACATAAACACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp ACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCATCAGTGGCTGAAGAAGAAGTaGCTAAATCCAGTAGTGAAC +
Preference number: 4 (lower is better)
Translates to: TNMNRTQPSYGFPFWPHQWLKKK*LNPVVN
Trigger: GTTCACTACTGGATTTAGTCACTTCTTCTTCAGCCA...CTGATGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR TCA 90 bp CACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATTATTCAGCTATTTAGAGGAAATCCAGCTGCTTaGGGAGCCCGGCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: HYCRDLAPKLYLIIQLFRGNPAA*GARPSH
Trigger: GTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCC...TCTAAATAGCTGAATAATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR GCA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGTCCTTCAGGAGAAACTaGTCCTTCTCACTTTTGATT +
Preference number: 4 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVSFRRN*SFSLLI
Trigger: AATCAAAAGTGAGAAGGAGCAGTTTCTCCTGAAGGA...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp CAATCAATCCATTCCATTCTGAGGAACCAACAGGCCAACCACTATTGCAGAGATCAGGCCAACCACTATTaGAGAGATTTGGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: QSIHSILRNQQANHYCRDQANHY*RDLAPK
Trigger: TTTGGGAGCCAAATCTCTGCAATAGTGGTTGGCCTG...ATCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CCA 90 bp ACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCATCAGTGGTATTCTCAGCCTTaGTCTCATGCTTGTCATGAT +
Preference number: 4 (lower is better)
Translates to: TNMNRTQPSYGFPFWPHQWYSQP*SHACHD
Trigger: ATCATGACAAGCATGAGACCAAGGCTGAGAATACCA...CTGATGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp AGCAAATTCATCCATCCACCTACCTACTGTGTTTATGTACCAGGCTTGATAAATTGTCCCTGTACCCCCTaGTCAGAGACCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SKFIHPPTYCVYVPGLINCPCTP*SETSSS
Trigger: AGAGGAAGAGGTCTCTGACCAGGGGGTACAGGGACA...ATTTATCAAGCCTGGTACATAAACACAGTAGGTAGGTGGATGGATGAATTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
3UTR CAA 72 bp AAAGGCAGGTCAATTAGGAATGTGCTAGCTGAAGTCTaGACCGGACAGCAAATTCATCCATCCACCTACCTA +
Preference number: 4 (lower is better)
Translates to: KGRSIRNVLAEV*TGQQIHPSTYL
Trigger: TAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGCTAGCACATTCCTAATTGACCTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp TACTGTGTTTATGTACCAGGCTTGATAAATACAGAAACAAATGAGACCAGAACTCTTTCCAACTGCTGCTaGGCATCCTGGAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YCVYVPGLINTETNETRTLSNCC*ASWSSQ
Trigger: CTGGGAGCTCCAGGATGCTCAGCAGCAGTTGGAAAG...AGTTCTGGTCTCATTTGTTTCTGTATTTATCAAGCCTGGTACATAAACACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR TCA 90 bp TGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAAACACTGCAATTGCTGGGGGTCTTTaGAGGCTGAGAAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: CVNGPNIIEWLLGGPNTAIAGGL*RLRKLF
Trigger: AAAAAGCTTTCTCAGCCTTCAAAGACCCCCAGCAAT...TGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp TGCCCTACTCACCTAACAGTTTTGCTGACAATGAACGAGATAATATTTCTAGCAGGGTCAGATAGCCATTaGCATCAGCATCCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: CPTHLTVLLTMNEIIFLAGSDSH*HQHPGH
Trigger: ATGCCCTGGATGCTGATGGCAATGGCTATCTGACCC...TGCTAGAAATATTATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp TGCCCTACTCACCTAACAGTTTTGCTGACAATGAACGAGATAATATTTCTAGCATGGTGGTCCAAACACTaGACTGGGGACCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: CPTHLTVLLTMNEIIFLAWWSKH*TGDQGN
Trigger: ATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCA...TGCTAGAAATATTATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGTAGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR GCA 90 bp CAATCAATCCATTCCATTCTGAGGAACCAACAGGCCAACCACTATTGCAGAGATTGCTGTCCACATATTTaGCTATCACAGAGCCAGATC +
Preference number: 4 (lower is better)
Translates to: QSIHSILRNQQANHYCRDCCPHI*LSQSQI
Trigger: GATCTGGCTCTGTGATAGGCAAATATGTGGACAGCA...ATCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
3UTR CAA 72 bp GCATGGGGAGACAGAGGACGATGTAATAACTATCATTaGTTTAGAGCCTTTCAGCTGACTAAGCTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: AWGDRGRCNNYH*FRAFQLTKLFP
Trigger: GGGAAAGAGCTTAGTCAGCTGAAAGGCTCTAAACAAATGATAGTTATTACATCGTCCTCTGTCTCCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CCA 90 bp AGCAAATTCATCCATCCACCTACCTACTGTGTTTATGTACCAGGCTTGATAAATATCTCCTTCTCTTGGTaGAGTTTGCAGGCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SKFIHPPTYCVYVPGLINISFSW*SLQASC
Trigger: GCAAGAGGCCTGCAAACTCCACCAAGAGAAGGAGAT...ATTTATCAAGCCTGGTACATAAACACAGTAGGTAGGTGGATGGATGAATTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR GCA 90 bp AATGGTAGGACCTCATGTCTAATTTATTTTTGGAGGCTTTACAGAACTCAAAAGACTGAAGAGTCGGGATaGCTCTATCTCTCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NGRTSCLIYFWRLYRTQKTEESG*LYLSVA
Trigger: GGCCACAGAGAGATAGAGGCATCCCGACTCTTCAGT...CTTTTGAGTTCTGTAAAGCCTCCAAAAATAAATTAGACATGAGGTCCTACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CCA 90 bp TGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAAACACTGCAGGAAGTCTTCAAAGTTaGACAGTAAATGAGGTTCCT +
Preference number: 4 (lower is better)
Translates to: CVNGPNIIEWLLGGPNTAGSLQS*TVNEVP
Trigger: AGGAACCTCATTTACTGTCCAACTTTGAAGACTTCC...TGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
3UTR CAA 72 bp CTGAGGAACCAACAGGCCAACCACTATTGCAGAGATTaGGCTCCCAAATTGTATCTCATTATTCAGCTATTT +
Preference number: 4 (lower is better)
Translates to: LRNQQANHYCRD*APKLYLIIQLF
Trigger: AAATAGCTGAATAATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR TCA 90 bp TTCAGCTATTTAGAACAAGAATTCATGATGATCAGGCCCAAAGGTTTTACTGATCAATCCATTCCATTCTaGGGAACCAACAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: FSYLEQEFMMIRPKGFTDQSIPF*GTNRPT
Trigger: GGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTG...ATCAGTAAAACCTTTGGGCCTGATCATCATGAATTCTTGTTCTAAATAGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR GCA 90 bp GAACCAACAGGCCAACCACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATTGTGTTTGCCTTGGCTaGCTTATTTTTCTGAAAACA +
Preference number: 4 (lower is better)
Translates to: EPTGQPLLQRFGSQIVSHCVCLG*LIFLKT
Trigger: TGTTTTCAGAAAAATAAGGCAGCCAAGGCAAACACA...ATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTGGTTGGCCTGTTGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR GCA 90 bp CAATCAATCCATTCCATTCTGAGGAACCAACAGGCCAACCACTATTGCAGAGATTTTTCATTTCATGCTTaGAGTCTTCAAGGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: QSIHSILRNQQANHYCRDFSFHA*SLQGLS
Trigger: AGAGAGACCTTGAAGACTGCAAGCATGAAATGAAAA...ATCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CCA 90 bp AATGGTAGGACCTCATGTCTAATTTATTTTTGGAGGCTTTACAGAACTCAAAAGGCCTCTATCTCTCTGTaGCCATCTCCTAAGAATCCC +
Preference number: 4 (lower is better)
Translates to: NGRTSCLIYFWRLYRTQKASISL*PSPKNP
Trigger: GGGATTCTTAGGAGATGGCCACAGAGAGATAGAGGC...CTTTTGAGTTCTGTAAAGCCTCCAAAAATAAATTAGACATGAGGTCCTACCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR TCA 90 bp TGCCCTACTCACCTAACAGTTTTGCTGACAATGAACGAGATAATATTTCTAGCACTCATTCAACAAACATaGACAGAACACAGCCGAGTT +
Preference number: 4 (lower is better)
Translates to: CPTHLTVLLTMNEIIFLALIQQT*TEHSRV
Trigger: AACTCGGCTGTGTTCTGTTCATGTTTGTTGAATGAG...TGCTAGAAATATTATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGTAGGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CCA 90 bp ACCACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATTATTCAGCTATTTATTTTCCAACTTGCCCTaGAAGCAGCTGTGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: TTIAEIWLPNCISLFSYLFSNLP*KQLCLP
Trigger: AGGCAAACACAGCTGCTTCCAGGGCAAGTTGGAAAA...TAAATAGCTGAATAATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR GCA 90 bp TTCAGCTATTTAGAACAAGAATTCATGATGATCAGGCCCAAAGGTTTTACTGATGGAAGCAGCTGTGTTTaGCTTGGCTGCCTTATTTTT +
Preference number: 4 (lower is better)
Translates to: FSYLEQEFMMIRPKGFTDGSSCV*LGCLIF
Trigger: AAAAATAAGGCAGCCAAGGCAAACACAGCTGCTTCC...ATCAGTAAAACCTTTGGGCCTGATCATCATGAATTCTTGTTCTAAATAGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CCA 90 bp AATGGTAGGACCTCATGTCTAATTTATTTTTGGAGGCTTTACAGAACTCAAAAGCAGCTGTGTTTGCCTTaGCTGCCTTATTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: NGRTSCLIYFWRLYRTQKQLCLP*LPYFSE
Trigger: TTCAGAAAAATAAGGCAGCCAAGGCAAACACAGCTG...CTTTTGAGTTCTGTAAAGCCTCCAAAAATAAATTAGACATGAGGTCCTACCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR TCA 90 bp AATGGTAGGACCTCATGTCTAATTTATTTTTGGAGGCTTTACAGAACTCAAAAGGCTGCCTTATTTTTCTaGAAACATATGTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: NGRTSCLIYFWRLYRTQKAALFF*KHMSRS
Trigger: TGAACGGGACATATGTTTTCAGAAAAATAAGGCAGC...CTTTTGAGTTCTGTAAAGCCTCCAAAAATAAATTAGACATGAGGTCCTACCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CCA 90 bp CACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATTATTCAGCTATTTAGAACTATTGCAGAGATTTaGCTCCCAAATTGTATCTCA +
Preference number: 4 (lower is better)
Translates to: HYCRDLAPKLYLIIQLFRTIAEI*LPNCIS
Trigger: TGAGATACAATTTGGGAGCCAAATCTCTGCAATAGT...TCTAAATAGCTGAATAATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR GCA 90 bp CACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATTATTCAGCTATTTAGAATCTTTTTCATTTCATaGTTGCAGTCTTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: HYCRDLAPKLYLIIQLFRIFFIS*LQSSRS
Trigger: AGACCTTGAAGACTGCAAGCATGAAATGAAAAAGAT...TCTAAATAGCTGAATAATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS TCA 90 bp TTTCCGCTCCGAGCCGCGCGGGCTGGACCAGCCCCTCAGCGGAGCTaGACGGGAAGCGGCGCCCCCTGGACGCCCTCCGGGACGTGCGCG +
Preference number: 5 (lower is better)
Translates to: FPLRAARAGPAPQRS*TGSGAPWTPSGTCA
Trigger: CGCGCACGTCCCGGAGGGCGTCCAGGGGGCGCCGCTTCCCGTTCAGCTCCGCTGAGGGGCTGGTCCAGCCCGCGCGGCTCGGAGCGGAAA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535507.1
CDS GCA 90 bp CCTGCCCGCGCCGCCCGCTCGGCTCTCAGCTGTCAAGCAGCCGCCTaGTCCGCCCGACTCTTTCCGCTCCGAGCCGCGCGGGCTGGACCA +
Preference number: 5 (lower is better)
Translates to: PARAARSALSCQAAA*SARLFPLRAARAGP
Trigger: TGGTCCAGCCCGCGCGGCTCGGAGCGGAAAGAGTCGGGCGGAGCAGGCGGCTGCTTGACAGCTGAGAGCCGAGCGGGCGGCGCGGGCAGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535507.1
CDS CCA 90 bp AGCCGCCTGCTCCGCCCGACTCTTTCCGCTCCGAGCCGCGCGGGCTaGACCAGCCCCTCAGCGGAGCTGAACGGGAAGCGGCGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: SRLLRPTLSAPSRAG*TSPSAELNGKRRPL
Trigger: CAGGGGGCGCCGCTTCCCGTTCAGCTCCGCTGAGGGGCTGGTCCAGCCCGCGCGGCTCGGAGCGGAAAGAGTCGGGCGGAGCAGGCGGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535507.1
CDS GCA 90 bp CTGTGGTCAGGGCATGACCTTGGGCGTGTAGGCTTCCCGTGGACCTaGCCGCGCCGCCCGCTCGGCTCTCAGCTGTCAAGCAGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: LWSGHDLGRVGFPWT*PRRPLGSQLSSSRL
Trigger: CAGGCGGCTGCTTGACAGCTGAGAGCCGAGCGGGCGGCGCGGGCAGGTCCACGGGAAGCCTACACGCCCAAGGTCATGCCCTGACCACAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000440314.7
ENST00000535507.1
CDS GCA 90 bp CCTTCCGACCCCAGGCTTCTGGGAGGTGCTCTCAGCACAGGCCAGTaGCCACCGACGCACCTTAGGAAATCCAGCTGCTTGAGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: PSDPRLLGGALSTGQ*PPTHLRKSSCLRSP
Trigger: CGGGCTCCTCAAGCAGCTGGATTTCCTAAGGTGCGTCGGTGGGCACTGGCCTGTGCTGAGAGCACCTCCCAGAAGCCTGGGGTCGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS CCA 90 bp AGTTGCTGCTGCCCCACCCTTGACAAACAGCCCAATGGCCCCAGGTaGCTCCGTGCCAGCCTCCTGAAGGGCAGCTGTGGTCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: SCCCPTLDKQPNGPR*LRASLLKGSCGQGM
Trigger: CATGCCCTGACCACAGCTGCCCTTCAGGAGGCTGGCACGGAGCCACCTGGGGCCATTGGGCTGTTTGTCAAGGGTGGGGCAGCAGCAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252322.1
ENST00000440314.7
ENST00000514026.2
ENST00000535507.1
CDS TCA 90 bp GCACAGGCCAGTGCCCACCGACGCACCTTAGGAAATCCAGCTGCTTaGGGAGCCCGGCCTTCTCACGCTGTAGACTCTCCGTCACACGGT +
Preference number: 5 (lower is better)
Translates to: AQASAHRRTLGNPAA*GARPSHAVDSPSHG
Trigger: ACCGTGTGACGGAGAGTCTACAGCGTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAGGTGCGTCGGTGGGCACTGGCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS CCA 90 bp CTGGCATGGAGCCCACACTTCTTGCCCACTGCGGACACCCACTCCTaGCCAGAATTGTCTGCCACCCCTGGTGAAGCCGCTCCCATCAGT +
Preference number: 5 (lower is better)
Translates to: LAWSPHFLPTADTHS*PELSATPGEAAPIS
Trigger: ACTGATGGGAGCGGCTTCACCAGGGGTGGCAGACAATTCTGGCCAGGAGTGGGTGTCCGCAGTGGGCAAGAAGTGTGGGCTCCATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS-3UTR CAA 90 bp GTGACCTCAGGTTTGCTGGGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGTGGGGCCTCCGGGATTaGTCCCTGTACCCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VTSGLLGAVLVGPYQPQQWGLRD*SLYPLV
Trigger: GACCAGGGGGTACAGGGACAAATCCCGGAGGCCCCA...CTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCCCAGCAAACCTGAGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp GGGCACTCTCTCAGCAGGCACGTTTTTCCAGCACGTAGGCAAGGATaGCCCTCAGACTGGTCCTTCCGACCCCAGGCTTCTGGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: GHSLSRHVFPARRQG*PSDWSFRPQASGRC
Trigger: GCACCTCCCAGAAGCCTGGGGTCGGAAGGACCAGTCTGAGGGTCATCCTTGCCTACGTGCTGGAAAAACGTGCCTGCTGAGAGAGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS GCA 90 bp CTCAGCACAGGCCAGTGCCCACCGACGCACCTTAGGAAATCCAGCTaGTTGAGGAGCCCGGCCTTCTCACGCTGTAGACTCTCCGTCACA +
Preference number: 5 (lower is better)
Translates to: LSTGQCPPTHLRKSS*LRSPAFSRCRLSVT
Trigger: TGTGACGGAGAGTCTACAGCGTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAGGTGCGTCGGTGGGCACTGGCCTGTGCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS GCA 90 bp TCTAGAAGCTGTCGCCACTGCTCCTGGCATGGAGCCCACACTTCTTaGCCACTGCGGACACCCACTCCTGGCCAGAATTGTCTGCCACCC +
Preference number: 5 (lower is better)
Translates to: SRSCRHCSWHGAHTS*PLRTPTPGQNCLPP
Trigger: GGGTGGCAGACAATTCTGGCCAGGAGTGGGTGTCCGCAGTGGGCAAGAAGTGTGGGCTCCATGCCAGGAGCAGTGGCGACAGCTTCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS-3UTR CAA 90 bp TGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCCCGCTCCTTCTCGTTGTCAACCTGTGGGTAATGGATaGCTACTAGTGGCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: WQAALRGPGGLPAPSRCQPVGNG*LLVAAG
Trigger: CCCAGCTGCCACTAGTAGCAATCCATTACCCACAGG...TTGACAACGAGAAGGAGCGGGAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS GCA 90 bp TCTCCTGGCACTCCTGCTGAATCCCAGCGCTCTGGATCCGGCTCCTaGAGGGTTTTTCTTGTGCTAAGTGCCCAGTGGAGGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SPGTPAESQRSGSGS*RVFLVLSAQWRLWL
Trigger: CAGCCAGAGCCTCCACTGGGCACTTAGCACAAGAAAAACCCTGCAGGAGCCGGATCCAGAGCGCTGGGATTCAGCAGGAGTGCCAGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252322.1
ENST00000440314.7
ENST00000514026.2
ENST00000535507.1
CDS GCA 90 bp GGTTCCTTTGGCCCACCTTTCAACCCCGAGTGGCCTCCAGAGAGCTaGCAGTTGTGGTCATGTTCATCCTGGGCTGCGGGCAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: GSFGPPFNPEWPPES*QLWSCSSWAAGRRM
Trigger: CATCCTTCTGCCCGCAGCCCAGGATGAACATGACCACAACTGGCAGCTCTCTGGAGGCCACTCGGGGTTGAAAGGTGGGCCAAAGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 90 bp GGCCCACCTTTCAACCCCGAGTGGCCTCCAGAGAGCTGCCAGTTGTaGTCATGTTCATCCTGGGCTGCGGGCAGAAGGATGGCTCAATAC +
Preference number: 5 (lower is better)
Translates to: GPPFNPEWPPESCQL*SCSSWAAGRRMAQY
Trigger: GTATTGAGCCATCCTTCTGCCCGCAGCCCAGGATGAACATGACCACAACTGGCAGCTCTCTGGAGGCCACTCGGGGTTGAAAGGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp AGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGGGGTACGGACCCTCCCGCTCCTTCTCGTaGTCAAGCTTATTACCCAGC +
Preference number: 5 (lower is better)
Translates to: RGSSSTEMILRSGRGYGPSRSFS*SSLLPS
Trigger: GCTGGGTAATAAGCTTGACAACGAGAAGGAGCGGGA...GGGTCCGTACCCCCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp GAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCTCCGAGGCCCCGGGGGACTTCGCAGGGAAGCATCTTTaGTGTAGAGGCGTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: EDQIVLRGKLLSEAPGDFAGKHL*CRGVEP
Trigger: GGGCTCCACGCCTCTACACAAAAGATGCTTCCCTGC...GAAGTCCCCCGGGGCCTCGGAGAGCAGCTTGCCACGGAGAACAATCTGATCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp TGTGTCCAGCTGGGCCCCAGCTCAGCACACCTCTCTAGTGAATGCTaGGAACAGAGGACATGCTCCCCTGCTGACACTGCTGCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: CVQLGPSSAHLSSEC*EQRTCSPADTAASH
Trigger: GTGACTGGCAGCAGTGTCAGCAGGGGAGCATGTCCTCTGTTCTCAGCATTCACTAGAGAGGTGTGCTGAGCTGGGGCCCAGCTGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 90 bp GGGCTTCCTCATCTTCGCCCATGTCGCCCAGATCCTCATCCCCTCTaGACAGATACACCTTCTCTTCATGGCGCTGGGCCACCTGTTCAC +
Preference number: 5 (lower is better)
Translates to: GLPHLRPCRPDPHPL*TDTPSLHGAGPPVH
Trigger: GTGAACAGGTGGCCCAGCGCCATGAAGAGAAGGTGTATCTGTCCAGAGGGGATGAGGATCTGGGCGACATGGGCGAAGATGAGGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 90 bp GCCTCCGCCACCTCCAGGGGGAAAGTGATGCACTCCCAGCCTCTCTaGAAGAGACTGCTCCAAAACTCAACTTCCCGGGAAACTGAGGAG +
Preference number: 5 (lower is better)
Translates to: ASATSRGKVMHSQPL*KRLLQNSTSRETEE
Trigger: CTCCTCAGTTTCCCGGGAAGTTGAGTTTTGGAGCAGTCTCTTCCAGAGAGGCTGGGAGTGCATCACTTTCCCCCTGGAGGTGGCGGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 90 bp AGCAAAGGGAGGGAGGGTTCCTTTGGCCCACCTTTCAACCCCGAGTaGCCTCCAGAGAGCTGCCAGTTGTGGTCATGTTCATCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SKGREGSFGPPFNPE*PPESCQLWSCSSWA
Trigger: AGCCCAGGATGAACATGACCACAACTGGCAGCTCTCTGGAGGCCACTCGGGGTTGAAAGGTGGGCCAAAGGAACCCTCCCTCCCTTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 90 bp TGTTCAGTATCTGGTGTCTGGAACTCTCTCTGGATTGCCTGGCAATaGGCTAGTTGGGCCCAGCAGCCTCCGCCACCTCCAGGGGGAAAG +
Preference number: 5 (lower is better)
Translates to: CSVSGVWNSLWIAWQ*ASWAQQPPPPPGGK
Trigger: CTTTCCCCCTGGAGGTGGCGGAGGCTGCTGGGCCCAACTAGCTCATTGCCAGGCAATCCAGAGAGAGTTCCAGACACCAGATACTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 90 bp CTGAGGAGCTCCAGGGTCACCAGGTGCTGGGCAGACAGAATTTCCTaGCATTCCTCGATAGTTAAGGCTGCCTGGAACCCCAGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LRSSRVTRCWADRIS*HSSIVKAAWNPSGV
Trigger: CACACCACTGGGGTTCCAGGCAGCCTTAACTATCGAGGAATGGCAGGAAATTCTGTCTGCCCAGCACCTGGTGACCCTGGAGCTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS-3UTR CAA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCGTCTTTTTCAGAACCTaGCAGCTCCCGGCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGVFFRT*QLPAPR
Trigger: CCGAGGAGCCGGGAGCTGCAAGGTTCTGAAAAAGAC...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp CTCTGTGACCTCAGGTTTGCTGGGGGCAGTCCTTGTAGGACCCTATCAGCCACAAGGAAATCCAGCTGCTaGAGGAGCCCGGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LCDLRFAGGSPCRTLSATRKSSC*RSPAFS
Trigger: TGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCT...TGTGGCTGATAGGGTCCTACAAGGACTGCCCCCAGCAAACCTGAGGTCACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp AGGAGCTGGGGCAGGGGGTCTTCTTCAACGGAGATGATTCTGCGGAGCGGCCGGCTGCTGTCCACATATTaGCCTATCACAGAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: RSWGRGSSSTEMILRSGRLLSTY*PITEPD
Trigger: ATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAG...CCGGCCGCTCCGCAGAATCATCTCCGTTGAAGAAGACCCCCTGCCCCAGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp CCACCGCCGGACCGACAGGAACGACTGCTTGTCTGTGAGATCGTACATGACGATCCCACGAACACAATCTaGAAGAGCCGGTCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: PPPDRQERLLVCEIVHDDPTNTI*KSRSGA
Trigger: TGCCCCTGACCGGCTCTTCAAGATTGTGTTCGTGGG...ATCGTCATGTACGATCTCACAGACAAGCAGTCGTTCCTGTCGGTCCGGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp GAGAGGAGGCAGCACACCTGTGTTGAATTCTCCTGGCACTCCTGCTaGATCCCAGCGCTCTGGATCCGGCTCCTGCAGGGTTTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: ERRQHTCVEFSWHSC*IPALWIRLLQGFSC
Trigger: ACAAGAAAAACCCTGCAGGAGCCGGATCCAGAGCGCTGGGATTCAGCAGGAGTGCCAGGAGAATTCAACACAGGTGTGCTGCCTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252322.1
ENST00000440314.7
ENST00000514026.2
ENST00000535507.1
CDS TCA 90 bp CATGGTGACGAGAAGCCTTGGCGGGCAAGTCCCGTTGCTGAGGTGTaGCTTCAGAGATCAAGTGGAATGTGCCCTCTTGGTCCCATCCTC +
Preference number: 5 (lower is better)
Translates to: HGDEKPWRASPVAEV*LQRSSGMCPLGPIL
Trigger: GAGGATGGGACCAAGAGGGCACATTCCACTTGATCTCTGAAGTCACACCTCAGCAACGGGACTTGCCCGCCAAGGCTTCTCGTCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 90 bp TCCAACACCTTTTGGGCTCCAAGTCTGTCCATCAGCATCCGGAACTaGGCTTCCTCATCTTCGCCCATGTCGCCCAGATCCTCATCCCCT +
Preference number: 5 (lower is better)
Translates to: SNTFWAPSLSISIRN*ASSSSPMSPRSSSP
Trigger: AGGGGATGAGGATCTGGGCGACATGGGCGAAGATGAGGAAGCCCAGTTCCGGATGCTGATGGACAGACTTGGAGCCCAAAAGGTGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS-3UTR CAA 90 bp TCCTCACAGAATCTCCTCAGGAAGGATGTCTTCCCCACCGCGGAATTGCCCACGCCCAGGAGTTCTCTTTaGACCTTCACACGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSQNLLRKDVFPTAELPTPRSSL*TFTRAC
Trigger: GCAGGCTCGTGTGAAGGTCAAAAGAGAACTCCTGGG...CGTGGGCAATTCCGCGGTGGGGAAGACATCCTTCCTGAGGAGATTCTGTGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp GCCTCTCTGGAAGAGACTGCTCCAAAACTCAACTTCCCGGGAAACTaGGGAGCTCCAGGGTCACCAGGTGCTGGGCAGACAGAATTTCCT +
Preference number: 5 (lower is better)
Translates to: ASLEETAPKLNFPGN*GAPGSPGAGQTEFP
Trigger: AGGAAATTCTGTCTGCCCAGCACCTGGTGACCCTGGAGCTCCTCAGTTTCCCGGGAAGTTGAGTTTTGGAGCAGTCTCTTCCAGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 90 bp ACTCAGCAACCTCAGGCCAACTCGGGTGGCAAAAGTACCCGCCATTaGTCCTTCTCAGCAGGTGCCCAACAGATACTGGTGACAACACTG +
Preference number: 5 (lower is better)
Translates to: TQQPQANSGGKSTRH*SFSAGAQQILVTTL
Trigger: CAGTGTTGTCACCAGTATCTGTTGGGCACCTGCTGAGAAGGAGCAATGGCGGGTACTTTTGCCACCCGAGTTGGCCTGAGGTTGCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 90 bp GACTTGAATTCCACCATCAGCAAGACTCCTGTGCAGCCACACACCTaGCAGGAGAGGAGGCAGCACACCTGTGTTGAATTCTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: DLNSTISKTPVQPHT*QERRQHTCVEFSWH
Trigger: GTGCCAGGAGAATTCAACACAGGTGTGCTGCCTCCTCTCCTGCCAGGTGTGTGGCTGCACAGGAGTCTTGCTGATGGTGGAATTCAAGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 90 bp ACTCCGATTCTTACCATCAGCAAGACTCCTGTGCAGCCACACACCTaGCAGGAGAGGAGGCAGCACACCTGTGTTGAATTCTCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: TPILTISKTPVQPHT*QERRQHTCVEFSWH
Trigger: GTGCCAGGAGAATTCAACACAGGTGTGCTGCCTCCTCTCCTGCCAGGTGTGTGGCTGCACAGGAGTCTTGCTGATGGTAAGAATCGGAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 90 bp AGCCCTAGGAAACTCATACACTCAGCAACCTCAGGCCAACTCGGGTaGCAAAAGTACCCGCCATTGCTCCTTCTCAGCAGGTGCCCAACA +
Preference number: 5 (lower is better)
Translates to: SPRKLIHSATSGQLG*QKYPPLLLLSRCPT
Trigger: TGTTGGGCACCTGCTGAGAAGGAGCAATGGCGGGTACTTTTGCCACCCGAGTTGGCCTGAGGTTGCTGAGTGTATGAGTTTCCTAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 90 bp GCTGCCAGTTGTGGTCATGTTCATCCTGGGCTGCGGGCAGAAGGATaGCTCAATACCTTAGCTCATAGCCACCACTTCTGGGTCCCACTT +
Preference number: 5 (lower is better)
Translates to: AASCGHVHPGLRAEG*LNTLAHSHHFWVPL
Trigger: AAGTGGGACCCAGAAGTGGTGGCTATGAGCTAAGGTATTGAGCCATCCTTCTGCCCGCAGCCCAGGATGAACATGACCACAACTGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGGCTGCTGCCCCACCCTaGACAAACAGCCCAATGGCC +
Preference number: 5 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVAAAPP*TNSPMA
Trigger: GGCCATTGGGCTGTTTGTCAAGGGTGGGGCAGCAGC...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCCACCTGGAGGGTACTTaGGCCACTGGTGACTTGAAT +
Preference number: 5 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGHLEGT*ATGDLN
Trigger: ATTCAAGTCACCAGTGGCCAAAGTACCCTCCAGGTG...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp GAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCTTTCTGCTCCAGCTCTaGACTGCGGGCTTGAAACCT +
Preference number: 5 (lower is better)
Translates to: EWLLGGPNTALGTKGIEGFLLQL*TAGLKP
Trigger: AGGTTTCAAGCCCGCAGTCAAGAGCTGGAGCAGAAA...GCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR CAA 90 bp TCCTCACAGAATCTCCTCAGGAAGGATGTCTTCCCCACCGCGGAATTGCCCACGTTCCATCTCCTTCTCTaGGTGGAGTTTGCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: SSQNLLRKDVFPTAELPTFHLLL*VEFAGL
Trigger: GAGGCCTGCAAACTCCACCAAGAGAAGGAGATGGAA...CGTGGGCAATTCCGCGGTGGGGAAGACATCCTTCCTGAGGAGATTCTGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp GCAGGATTTCTTCTTAGCAGGGTGGCCGACCTGAATGGTGTCCTCTCTCACTGTCCAGGGAGCTTCTCCTaGGGATGCCAAACACCTCCT +
Preference number: 5 (lower is better)
Translates to: AGFLLSRVADLNGVLSHCPGSFS*GCQTPP
Trigger: AGGAGGTGTTTGGCATCCCAAGGAGAAGCTCCCTGG...ACAGTGAGAGAGGACACCATTCAGGTCGGCCACCCTGCTAAGAAGAAATCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp CTTCAGCATCACAGGTCTGAAAGAACTCCTGTGCCTTCCTCAGCATaGCTAGCTGGCCCGACGTTTGCTCCTGAGTCTCCTTCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: LQHHRSERTPVPSSA*LAGPTFAPESPSAP
Trigger: TGGAGCAGAAGGAGACTCAGGAGCAAACGTCGGGCCAGCTAGTCATGCTGAGGAAGGCACAGGAGTTCTTTCAGACCTGTGATGCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS TCA 90 bp ATATCCTTCCTGGCGATGAAGCCCTTGCCTTCAGCATCACAGGTCTaGAAGAACTCCTGTGCCTTCCTCAGCATGACTAGCTGGCCCGAC +
Preference number: 5 (lower is better)
Translates to: ISFLAMKPLPSASQV*KNSCAFLSMTSWPD
Trigger: GTCGGGCCAGCTAGTCATGCTGAGGAAGGCACAGGAGTTCTTTCAGACCTGTGATGCTGAAGGCAAGGGCTTCATCGCCAGGAAGGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS TCA 90 bp CCTCCTGAAGGGCAGCTGTGGTCAGGGCATGACAAGATCAGAAGATaGAGTCCCACAATAGACCGTCTGGAAGCTAGGGAGCAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: PPEGQLWSGHDKIRR*SPTIDRLEAREQGS
Trigger: GCTTCCTTGCTCCCTAGCTTCCAGACGGTCTATTGTGGGACTTCATCTTCTGATCTTGTCATGCCCTGACCACAGCTGCCCTTCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 90 bp GAGAGAAACAGCACAATGTTGCTAGATGGCAGTCAACGCTCAGGCTaGACGCAAGAGGGTCAGCAAGAGGTGGTGGGGAAGATGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ERNSTMLLDGSQRSG*TQEGQQEVVGKMPE
Trigger: CTCTGGCATCTTCCCCACCACCTCTTGCTGACCCTCTTGCGTTCAGCCTGAGCGTTGACTGCCATCTAGCAACATTGTGCTGTTTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 90 bp TCTCCGTCACACGGTACACTTCCATCTCCTTCTCTTGGTGGAGTTTaGAGGCCTCTTGCTGGAGGCTTTCCAACTGCTGCTGAGCATCCT +
Preference number: 5 (lower is better)
Translates to: SPSHGTLPSPSLGGV*RPLAGGFPTAAEHP
Trigger: AGGATGCTCAGCAGCAGTTGGAAAGCCTCCAGCAAGAGGCCTGCAAACTCCACCAAGAGAAGGAGATGGAAGTGTACCGTGTGACGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000333750.9
ENST00000440314.7
CDS CCA 90 bp TGCTCCCCTGCTGACACTGCTGCCAGTCACTTTCAGGCAGCACCATaGAACACCATTCATATTCACCCCGGCCCTTTGTATGTCCCTAGT +
Preference number: 5 (lower is better)
Translates to: CSPADTAASHFQAAP*NTIHIHPGPLYVPS
Trigger: ACTAGGGACATACAAAGGGCCGGGGTGAATATGAATGGTGTTCCATGGTGCTGCCTGAAAGTGACTGGCAGCAGTGTCAGCAGGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS-3UTR CAA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTGGCAGCACACCTGTGTaGAATTCTCCTGGCACTCCT +
Preference number: 5 (lower is better)
Translates to: YLVVQTLHWGPRELRALSGSTPV*NSPGTP
Trigger: AGGAGTGCCAGGAGAATTCAACACAGGTGTGCTGCC...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp GGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGGATTTCTTCTTAGCAGGGCTCTTGACTGCGGGCTaGAAACCTCTCTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: GAVLVGPYQPQQDFFLAGLLTAG*KPLCVL
Trigger: AAGGACACAGAGAGGTTTCAAGCCCGCAGTCAAGAG...CCCTGCTAAGAAGAAATCCTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp GAATTGTCTGCCACCCCTGGTGAAGCCGCTCCCATCAGTTTCTTATaGGCGCTTTTGTCCCAGTCAGAGAAGCAGACCCTGTGGGATGTT +
Preference number: 5 (lower is better)
Translates to: ELSATPGEAAPISFL*ALLSQSEKQTLWDV
Trigger: AACATCCCACAGGGTCTGCTTCTCTGACTGGGACAAAAGCGCTCATAAGAAACTGATGGGAGCGGCTTCACCAGGGGTGGCAGACAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 90 bp CTGTGCTCCCAGCTGGATTCAACCTTCTACTGCATCTCATTTCGCTaGTCCCTGCATGTGTCTGGAAGAACCGCTTTTCCAGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LCSQLDSTFYCISFR*SLHVSGRTAFPALQ
Trigger: CTGGAGAGCTGGAAAAGCGGTTCTTCCAGACACATGCAGGGAGCAGCGAAATGAGATGCAGTAGAAGGTTGAATCCAGCTGGGAGCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 90 bp CAGCACAGAGCAGCACACATACCTGTCTGTGGCCCTAGACGTGCCTaGTGTCTGTATTCCATCAGGACTCTGGAGTCTCCTTTTCAACCT +
Preference number: 5 (lower is better)
Translates to: QHRAAHIPVCGPRRA*CLYSIRTLESPFQP
Trigger: AGGTTGAAAAGGAGACTCCAGAGTCCTGATGGAATACAGACAGCAGGCACGTCTAGGGCCACAGACAGGTATGTGTGCTGCTCTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 90 bp AGGGCAAGGAGGGTATGGGATACTTCTTTTGTATCTGCACACAGCTaGCAGCACAGAGCAGCACACATACCTGTCTGTGGCCCTAGACGT +
Preference number: 5 (lower is better)
Translates to: RARRVWDTSFVSAHS*QHRAAHIPVCGPRR
Trigger: ACGTCTAGGGCCACAGACAGGTATGTGTGCTGCTCTGTGCTGGCAGCTGTGTGCAGATACAAAAGAAGTATCCCATACCCTCCTTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp CAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACTTTCTGCTCCAGCTCTaGACTGCGGGCTTGAAACCT +
Preference number: 5 (lower is better)
Translates to: QNYKVRTLSSVMLGPLSYFLLQL*TAGLKP
Trigger: AGGTTTCAAGCCCGCAGTCAAGAGCTGGAGCAGAAA...GTAGGACAGGGGGCCCAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp GGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCTTCTCTTGGTGGAGTTaGCAGGCCTCTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GPNIIEWLLGGPNTALGTFSWWS*QASCWR
Trigger: CCTCCAGCAAGAGGCCTGCAAACTCCACCAAGAGAA...GGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp TACTTGGTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTTTCCATCTCCTTCTCTaGGTGGAGTTTGCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: YLVVQTLHWGPRELRALSFHLLL*VEFAGL
Trigger: GAGGCCTGCAAACTCCACCAAGAGAAGGAGATGGAA...AGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCACCAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS-3UTR CAA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTAGCATTTGCTCAGGGGTaGCTCAAAGCCACCATCCAG +
Preference number: 5 (lower is better)
Translates to: HDDDTICLSEELLGDAPVAFAQG*LKATIQ
Trigger: CTGGATGGTGGCTTTGAGCAACCCCTGAGCAAATGC...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTAGTGTCTTCTTGCTCCTaGAGGAACCTGGCCAGATGG +
Preference number: 5 (lower is better)
Translates to: HDDDTICLSEELLGDAPVVSSCS*RNLARW
Trigger: CCATCTGGCCAGGTTCCTCAAGGAGCAAGAAGACAC...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp TTCTCAGCAGGTGCCCAACAGATACTGGTGACAACACTGCTCCTATaGATGAAGATCCCAGGACCTGGCCCGGTCAAGTGTATTGTGTCG +
Preference number: 5 (lower is better)
Translates to: FSAGAQQILVTTLLL*MKIPGPGPVKCIVS
Trigger: CGACACAATACACTTGACCGGGCCAGGTCCTGGGATCTTCATTCATAGGAGCAGTGTTGTCACCAGTATCTGTTGGGCACCTGCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 90 bp CCCAGCTGGATTCAACCTTCTACTGCATCTCATTTCGCTGCTCCCTaGATGTGTCTGGAAGAACCGCTTTTCCAGCTCTCCAGGACATTC +
Preference number: 5 (lower is better)
Translates to: PSWIQPSTASHFAAP*MCLEEPLFQLSRTF
Trigger: GAATGTCCTGGAGAGCTGGAAAAGCGGTTCTTCCAGACACATGCAGGGAGCAGCGAAATGAGATGCAGTAGAAGGTTGAATCCAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS-3UTR CAA 90 bp GAGTGGGGCAGAGCCTCCCCACCAGGAGGAATAAACTGGATGTGGGCGCATGTGCTCACTTTTGATTTGTaGTTCCATCTCCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: EWGRASPPGGINWMWAHVLTFDL*FHLLIE
Trigger: CTCTATGAGGAGATGGAACAACAAATCAAAAGTGAG...CACATGCGCCCACATCCAGTTTATTCCTCCTGGTGGGGAGGCTCTGCCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp ACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGTGGCTACTTGGAGGAAATCCAGCTGCTaGAGGAGCCCGGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: TGCGRMCKRTKHNRVATWRKSSC*RSPAFS
Trigger: TGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCT...CCAAGTAGCCACTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp CAGAACTACAAGGTAAGAACCTTGTCGTCTGTGATGCTGGGCCCCCTGTCCTACGACAGGAACGACTGCTaGTCTGTGAGATCGTACATG +
Preference number: 5 (lower is better)
Translates to: QNYKVRTLSSVMLGPLSYDRNDC*SVRSYM
Trigger: CATGTACGATCTCACAGACAAGCAGTCGTTCCTGTC...GTAGGACAGGGGGCCCAGCATCACAGACGACAAGGTTCTTACCTTGTAGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp TCCCTCTGCTGTCCACATATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACGGCACCACACTGTCTTaGGCCTGCAGGAAGCCGCAA +
Preference number: 5 (lower is better)
Translates to: SLCCPHICLSQSQISFSNGTTLS*ACRKPQ
Trigger: TTGCGGCTTCCTGCAGGCCAAAGACAGTGTGGTGCC...GTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp CATGACGATGACACCATCTGCCTTTCTGAAGAACTGCTGGGTGATGCACCGGTAGAGACGGATGCTTTGTaGGGCACCACACTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: HDDDTICLSEELLGDAPVETDAL*GTTLSL
Trigger: CAAAGACAGTGTGGTGCCCAACAAAGCATCCGTCTC...TACCGGTGCATCACCCAGCAGTTCTTCAGAAAGGCAGATGGTGTCATCGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAAGGAGGCCGCGGGGTGTaGAGACGGATGCTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: PPSISRTLSSSQCESVLEGGRGV*RRMLCW
Trigger: CCAACAAAGCATCCGTCTCAACACCCCGCGGCCTCC...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp GCATACAGAAGATTAACAGAAATGGGCCGAGTGGGCAGGGGCCGATaGAGAAGAATCGCTTTCATATTAAGTCTGCCCTCCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: AYRRLTEMGRVGRGR*RRIAFILSLPSSLC
Trigger: GCAGAGGGAGGAGGGCAGACTTAATATGAAAGCGATTCTTCTTCATCGGCCCCTGCCCACTCGGCCCATTTCTGTTAATCTTCTGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 90 bp GGACAGATACACCTTCTCTTCATGGCGCTGGGCCACCTGTTCACCTaGATCTTCCTGACTTGGGTTATTCTGGCTGAAGAAGAAGTGACT +
Preference number: 5 (lower is better)
Translates to: GQIHLLFMALGHLFT*IFLTWVILAEEEVT
Trigger: AGTCACTTCTTCTTCAGCCAGAATAACCCAAGTCAGGAAGATGCAGGTGAACAGGTGGCCCAGCGCCATGAAGAGAAGGTGTATCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS GCA 90 bp CAACTCGGGTGGCAAAAGTACCCGCCATTGCTCCTTCTCAGCAGGTaGCCAACAGATACTGGTGACAACACTGCTCCTATGAATGAAGAT +
Preference number: 5 (lower is better)
Translates to: QLGWQKYPPLLLLSR*PTDTGDNTAPMNED
Trigger: ATCTTCATTCATAGGAGCAGTGTTGTCACCAGTATCTGTTGGGCACCTGCTGAGAAGGAGCAATGGCGGGTACTTTTGCCACCCGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 90 bp CACCAGCTACTGGGAAGAAAACACATCTACAGGCTACGAACAGCCTaGAGGCTTCTGGGTTGCACCTTCACATTAAGGGCTCCAAAACTG +
Preference number: 5 (lower is better)
Translates to: HQLLGRKHIYRLRTA*RLLGCTFTLRAPKL
Trigger: CAGTTTTGGAGCCCTTAATGTGAAGGTGCAACCCAGAAGCCTGCAGGCTGTTCGTAGCCTGTAGATGTGTTTTCTTCCCAGTAGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 90 bp GAGGACCCAAGACAGCTGGAAGCCACTCGCCTTGTTGTCCATGGTTaGTCCATGGCGTATTTGTCTCTTTTGTCACATTCTGGACACAAC +
Preference number: 5 (lower is better)
Translates to: EDPRQLEATRLVVHG*SMAYLSLLSHSGHN
Trigger: GTTGTGTCCAGAATGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAGCTGTCTTGGGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 90 bp AAGTTCCTTGAGGGCAAGGAGGGTATGGGATACTTCTTTTGTATCTaGACACAGCTGCCAGCACAGAGCAGCACACATACCTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: KFLEGKEGMGYFFCI*TQLPAQSSTHTCLW
Trigger: CCACAGACAGGTATGTGTGCTGCTCTGTGCTGGCAGCTGTGTGCAGATACAAAAGAAGTATCCCATACCCTCCTTGCCCTCAAGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp GTGGTCCAAACACTGCACTGGGGACCAAGGGAATTGAGGGCACTCTCTCAGCAGTGCTCCTTCTCACTTTaGATTTGTTGTTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: VVQTLHWGPRELRALSQQCSFSL*ICCSIS
Trigger: GGAGATGGAACAACAAATCAAAAGTGAGAAGGAGCA...CTGCTGAGAGAGTGCCCTCAATTCCCTTGGTCCCCAGTGCAGTGTTTGGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS CCA 90 bp CATCGGCTGGATGAAGTCTCAGATTTCCTGTTACAGACCTGCGCATaGGTTCCTTGCTTTGCGGTCACTGCATATTGTACTGTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: HRLDEVSDFLLQTCA*VPCFAVTAYCTVPF
Trigger: AAAGGGCACAGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAGGTCTGTAACAGGAAATCTGAGACTTCATCCAGCCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp GGACCAAACATAATAGAGTGGCTACTTGGTGGTCCAAACACTGCACTGGGGACCATCTTCCAACACCTTTaGGGCTCCAAGTCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: GPNIIEWLLGGPNTALGTIFQHL*GSKSVH
Trigger: ATGGACAGACTTGGAGCCCAAAAGGTGTTGGAAGAT...GGTCCCCAGTGCAGTGTTTGGACCACCAAGTAGCCACTCTATTATGTTTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp GAACCAACAGGCCAACCACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATAGGAAATCCAGCTGCTaGAGGAGCCCGGCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: EPTGQPLLQRFGSQIVSHRKSSC*RSPAFS
Trigger: TGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCT...ATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTGGTTGGCCTGTTGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CAA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAAATTCTGAGCAGGCCTTaGGGGCTAGAGGAAGCCGCT +
Preference number: 5 (lower is better)
Translates to: PPSISRTLSSSQCESVLEILSRP*GLEEAA
Trigger: AGCGGCTTCCTCTAGCCCCAAAGGCCTGCTCAGAAT...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp GGAAGCATCTTTTGTGTAGAGGCGTGGAGCCCAAGTCACATTGAGTTGTTGAGCTTTTGTTCTGGTCTCTaGCATGGGGAGACAGAGGAC +
Preference number: 5 (lower is better)
Translates to: GSIFCVEAWSPSHIELLSFCSGL*HGETED
Trigger: GTCCTCTGTCTCCCCATGCAAGAGACCAGAACAAAA...GCTCAACAACTCAATGTGACTTGGGCTCCACGCCTCTACACAAAAGATGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAATTCTCTTGGTGGAGTTaGCAGGCCTCTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: PPSISRTLSSSQCESVLEFSWWS*QASCWR
Trigger: CCTCCAGCAAGAGGCCTGCAAACTCCACCAAGAGAA...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp GCTGAAGTCTTGACCGGACAGCAAATTCATCCATCCACCTACCTACTGTGTTTAGTTGAGACGGATGCTTaGTTGGGCACCACACTGTCT +
Preference number: 5 (lower is better)
Translates to: AEVLTGQQIHPSTYLLCLVETDA*LGTTLS
Trigger: AGACAGTGTGGTGCCCAACAAAGCATCCGTCTCAAC...TAAACACAGTAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS GCA 90 bp GATGAAGTCTCAGATTTCCTGTTACAGACCTGCGCATGGGTTCCTTaGTTTGCGGTCACTGCATATTGTACTGTGCCCTTTTCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: DEVSDFLLQTCAWVP*FAVTAYCTVPFSVQ
Trigger: CTGAACTGAAAAGGGCACAGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAGGTCTGTAACAGGAAATCTGAGACTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 90 bp ATTCTACATCGGCTGGATGAAGTCTCAGATTTCCTGTTACAGACCTaGGCATGGGTTCCTTGCTTTGCGGTCACTGCATATTGTACTGTG +
Preference number: 5 (lower is better)
Translates to: ILHRLDEVSDFLLQT*AWVPCFAVTAYCTV
Trigger: CACAGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAGGTCTGTAACAGGAAATCTGAGACTTCATCCAGCCGATGTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 90 bp AGGGCACACTCCAGTTCATTCTTCTCCTCATGGGCTTCTTGGAGCTaGGAGATGATTCTGGTCAGGAAGTCTTCAAAGTTGGACAGTAAA +
Preference number: 5 (lower is better)
Translates to: RAHSSSFFSSWASWS*EMILVRKSSKLDSK
Trigger: TTTACTGTCCAACTTTGAAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATGAACTGGAGTGTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 90 bp CTTTTTAGGGCACACTCCAGTTCATTCTTCTCCTCATGGGCTTCTTaGAGCTGGGAGATGATTCTGGTCAGGAAGTCTTCAAAGTTGGAC +
Preference number: 5 (lower is better)
Translates to: LFRAHSSSFFSSWAS*SWEMILVRKSSKLD
Trigger: GTCCAACTTTGAAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATGAACTGGAGTGTGCCCTAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 90 bp TTCAACCTTCTACTGCATCTCATTTCGCTGCTCCCTGCATGTGTCTaGAAGAACCGCTTTTCCAGCTCTCCAGGACATTCTTTAGGATGT +
Preference number: 5 (lower is better)
Translates to: FNLLLHLISLLPACV*KNRFSSSPGHSLGC
Trigger: ACATCCTAAAGAATGTCCTGGAGAGCTGGAAAAGCGGTTCTTCCAGACACATGCAGGGAGCAGCGAAATGAGATGCAGTAGAAGGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 90 bp ATGCCACAGAAGTCACTCTTAACTAAATTGCACTGTGCTCCCAGCTaGATTCAACCTTCTACTGCATCTCATTTCGCTGCTCCCTGCATG +
Preference number: 5 (lower is better)
Translates to: MPQKSLLTKLHCAPS*IQPSTASHFAAPCM
Trigger: CATGCAGGGAGCAGCGAAATGAGATGCAGTAGAAGGTTGAATCCAGCTGGGAGCACAGTGCAATTTAGTTAAGAGTGACTTCTGTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 90 bp GATACTGGTGACAACACTGCTCCTATGAATGAAGATCCCAGGACCTaGCCCGGTCAAGTGTATTGTGTCGGAATGCATCAAATAGTCAAC +
Preference number: 5 (lower is better)
Translates to: DTGDNTAPMNEDPRT*PGQVYCVGMHQIVN
Trigger: GTTGACTATTTGATGCATTCCGACACAATACACTTGACCGGGCCAGGTCCTGGGATCTTCATTCATAGGAGCAGTGTTGTCACCAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 90 bp TGCACCTTCACATTAAGGGCTCCAAAACTGGAGAGGCAGAAAAGTTaGCAGCATTGGATCCAAGCTTTACTAGGTGTGGAGACAAGTAGG +
Preference number: 5 (lower is better)
Translates to: CTFTLRAPKLERQKS*QHWIQALLGVETSR
Trigger: CCTACTTGTCTCCACACCTAGTAAAGCTTGGATCCAATGCTGCCAACTTTTCTGCCTCTCCAGTTTTGGAGCCCTTAATGTGAAGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS-3UTR CAA 90 bp GGGGCAGTCCTTGTAGGACCCTATCAGCCACAGCAGGATTTCTTCTTAGCAGGGCTTCTCACTTTTGATTaGTTGTTCCATCTCCTCATA +
Preference number: 5 (lower is better)
Translates to: GAVLVGPYQPQQDFFLAGLLTFD*LFHLLI
Trigger: TATGAGGAGATGGAACAACAAATCAAAAGTGAGAAG...CCCTGCTAAGAAGAAATCCTGCTGTGGCTGATAGGGTCCTACAAGGACTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp AGGAGGAATAAACTGGATGTGGGCGCATGTGTAAACGGACCAAACATAATAGAGCTCTTGACTGCGGGCTaGAAACCTCTCTGTGTCCTT +
Preference number: 5 (lower is better)
Translates to: RRNKLDVGACVNGPNIIELLTAG*KPLCVL
Trigger: AAGGACACAGAGAGGTTTCAAGCCCGCAGTCAAGAG...CTCTATTATGTTTGGTCCGTTTACACATGCGCCCACATCCAGTTTATTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp AGGCAGAGAGCACTATTTTGCAGATTTGAAAGCAGGCTCAGAACATCAAGCAGCTACAAGGTAAGAACCTaGTCGTCTGTGATGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RQRALFCRFESRLRTSSSYKVRT*SSVMLG
Trigger: GCCCAGCATCACAGACGACAAGGTTCTTACCTTGTA...GCTGCTTGATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTGCTCTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp TGGGAGATGATTCTGGTCAGGAAGTCTTCAAAGTTGGACAGTAAATaGGGTTCCTCCTTCTTCAGCTGCAACCAGAGCTGCTTGACATCA +
Preference number: 5 (lower is better)
Translates to: WEMILVRKSSKLDSK*GSSFFSCNQSCLTS
Trigger: TGATGTCAAGCAGCTCTGGTTGCAGCTGAAGAAGGAGGAACCTCATTTACTGTCCAACTTTGAAGACTTCCTGACCAGAATCATCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS GCA 90 bp TTCTTCTGTGTGCGAGTTATGAGTCTTGGTGAAGCCACTTCACTCTaGTACTGTTTCCTTGTCTGGAAAAGTGAGCTAGTGCTACCACTG +
Preference number: 5 (lower is better)
Translates to: FFCVRVMSLGEATSL*YCFLVWKSELVLPL
Trigger: CAGTGGTAGCACTAGCTCACTTTTCCAGACAAGGAAACAGTAGCAGAGTGAAGTGGCTTCACCAAGACTCATAACTCGCACACAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 90 bp GCAATTTTCCTTTTTAGGGCACACTCCAGTTCATTCTTCTCCTCATaGGCTTCTTGGAGCTGGGAGATGATTCTGGTCAGGAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: AIFLFRAHSSSFFSS*ASWSWEMILVRKSS
Trigger: TGAAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATGAACTGGAGTGTGCCCTAAAAAGGAAAATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 90 bp TGTCCATGGTTGCTCCATGGCGTATTTGTCTCTTTTGTCACATTCTaGACACAACCCAACGCATCCATGTCACCAATACCACATGTAGCT +
Preference number: 5 (lower is better)
Translates to: CPWLLHGVFVSFVTF*TQPNASMSPIPHVA
Trigger: AGCTACATGTGGTATTGGTGACATGGATGCGTTGGGTTGTGTCCAGAATGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp CCACATATTTGCCTATCACAGAGCCAGATCTCTTTTTCCAACTTGCCCTGGAAGAGTCACATTGAGTTGTaGAGCTGCCTGTGGGTAATG +
Preference number: 5 (lower is better)
Translates to: PHICLSQSQISFSNLPWKSHIEL*SCLWVM
Trigger: CATTACCCACAGGCAGCTCAACAACTCAATGTGACT...CTTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS TCA 90 bp ACTCCAGTTCATTCTTCTCCTCATGGGCTTCTTGGAGCTGGGAGATaGTTCTGGTCAGGAAGTCTTCAAAGTTGGACAGTAAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: TPVHSSPHGLLGAGR*FWSGSLQSWTVNEV
Trigger: AACCTCATTTACTGTCCAACTTTGAAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATGAACTGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS TCA 90 bp CAGAAAAACCTGGGTTCTGATCCTAGTTCTTCTGTGTGCGAGTTATaGGTCTTGGTGAAGCCACTTCACTCTGCTACTGTTTCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: QKNLGSDPSSSVCEL*VLVKPLHSATVSLS
Trigger: AGACAAGGAAACAGTAGCAGAGTGAAGTGGCTTCACCAAGACTCATAACTCGCACACAGAAGAACTAGGATCAGAACCCAGGTTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 90 bp TCTCCAGAGTCACTTCCGCTTTGCATATCTTTTTCATTTCATGCTTaGAGTCTTCAAGGTCTCTCTGGGTCTGATACTGAAGAGTCGGGA +
Preference number: 5 (lower is better)
Translates to: SPESLPLCISFSFHA*SLQGLSGSDTEESG
Trigger: TCCCGACTCTTCAGTATCAGACCCAGAGAGACCTTGAAGACTGCAAGCATGAAATGAAAAAGATATGCAAAGCGGAAGTGACTCTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CAA 90 bp CTCATTAAACCCAGCTCTGCTCGCATGAGATCAAGTACCAAGCACAGTCCTGTGACTCACCTAACAGTTTaGCTGACAATGAACGAGATA +
Preference number: 5 (lower is better)
Translates to: LIKPSSARMRSSTKHSPVTHLTV*LTMNEI
Trigger: TATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGT...CACAGGACTGTGCTTGGTACTTGATCTCATGCGAGCAGAGCTGGGTTTAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp CAATCAATCCATTCCATTCTGAGGAACCAACAGGCCAACCACTATTGCAGAGATCTGCTGTCCACATATTaGCCTATCACAGAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: QSIHSILRNQQANHYCRDLLSTY*PITEPD
Trigger: ATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAG...ATCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTGATTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CAA 90 bp AGAGTAGGCGCTGCATTCATAGAAGATCAGATTGTTCTCCGTGGCAAGCTGCTCCACTATTTTGCAGATTaGAAAGCAGGCTCAGAACAT +
Preference number: 5 (lower is better)
Translates to: RVGAAFIEDQIVLRGKLLHYFAD*KAGSEH
Trigger: ATGTTCTGAGCCTGCTTTCAAATCTGCAAAATAGTG...GAGCAGCTTGCCACGGAGAACAATCTGATCTTCTATGAATGCAGCGCCTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAAGTGCTAGCTGAAGTCTaGACCGGACAGCAAATTCAT +
Preference number: 5 (lower is better)
Translates to: PPSISRTLSSSQCESVLEVLAEV*TGQQIH
Trigger: ATGAATTTGCTGTCCGGTCAAGACTTCAGCTAGCAC...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp GAACCAACAGGCCAACCACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATTCATCCCGAAGGTGCTaGTTCCTTTCCCTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: EPTGQPLLQRFGSQIVSHSSRRC*FLSLRK
Trigger: TTTCCTAAGGGAAAGGAACAAGCACCTTCGGGATGA...ATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTGGTTGGCCTGTTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS GCA 90 bp CTTATAAAAATGGGAAAATTTGGAAACACACACACACAGGGAGAATaGCATGTGATGATAAAGGCAGGGATTGGAGTGACGCAGCTGCAA +
Preference number: 5 (lower is better)
Translates to: LIKMGKFGNTHTQGE*HVMIKAGIGVTQLQ
Trigger: TTGCAGCTGCGTCACTCCAATCCCTGCCTTTATCATCACATGGCATTCTCCCTGTGTGTGTGTGTTTCCAAATTTTCCCATTTTTATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS-3UTR CAA 90 bp GCTGAAGTCTTGACCGGACAGCAAATTCATCCATCCACCTACCTACTGTGTTTACTCACTTTTGATTTGTaGTTCCATCTCCTCATAGAG +
Preference number: 5 (lower is better)
Translates to: AEVLTGQQIHPSTYLLCLLTFDL*FHLLIE
Trigger: CTCTATGAGGAGATGGAACAACAAATCAAAAGTGAG...TAAACACAGTAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp CCACCATCCATCTCCAGAACTCTGTCATCATCCCAGTGTGAAAGTGTTTTAGAATGCTCCTTCTCACTTTaGATTTGTTGTTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: PPSISRTLSSSQCESVLECSFSL*ICCSIS
Trigger: GGAGATGGAACAACAAATCAAAAGTGAGAAGGAGCA...TTCTAAAACACTTTCACACTGGGATGATGACAGAGTTCTGGAGATGGATGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp TACTGTGTTTATGTACCAGGCTTGATAAATACAGAAACAAATGAGACCAGAACTTTCCCCACCGCGGAATaGCCCACGAACACAATCTTG +
Preference number: 5 (lower is better)
Translates to: YCVYVPGLINTETNETRTFPTAE*PTNTIL
Trigger: CAAGATTGTGTTCGTGGGCAATTCCGCGGTGGGGAA...AGTTCTGGTCTCATTTGTTTCTGTATTTATCAAGCCTGGTACATAAACACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS CCA 90 bp TATATATACGTATATACACAGAGAGAGAGAGAGCGAGCACACACTTaGCATGTCATCTTGTGCAGGAGCCATGCTAATCTTCTTTGTATC +
Preference number: 5 (lower is better)
Translates to: YIYVYTQRERERAHT*HVILCRSHANLLCI
Trigger: GATACAAAGAAGATTAGCATGGCTCCTGCACAAGATGACATGCCAAGTGTGTGCTCGCTCTCTCTCTCTCTGTGTATATACGTATATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp TTCAACAAACATGAACAGAACACAGCCGAGTTACGGATTTCCATTCTGGCCCCACTTCTCACTTTTGATTaGTTGTTCCATCTCCTCATA +
Preference number: 5 (lower is better)
Translates to: FNKHEQNTAELRISILAPLLTFD*LFHLLI
Trigger: TATGAGGAGATGGAACAACAAATCAAAAGTGAGAAG...TGGGGCCAGAATGGAAATCCGTAACTCGGCTGTGTTCTGTTCATGTTTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp GCTGAAGTCTTGACCGGACAGCAAATTCATCCATCCACCTACCTACTGTGTTTACTTTTGTATATTGTTTaGTTCTGGTCTCTTGCATGG +
Preference number: 5 (lower is better)
Translates to: AEVLTGQQIHPSTYLLCLLLYIV*FWSLAW
Trigger: CCATGCAAGAGACCAGAACAAAACAATATACAAAAG...TAAACACAGTAGGTAGGTGGATGGATGAATTTGCTGTCCGGTCAAGACTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp TCAATCAATCCATTCCATTCTGAGGAACCAACAGGCCAACCACTATTGCAGAGATTTTTCATTTCATGCTaGCAGTCTTCAAGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SINPFHSEEPTGQPLLQRFFISC*QSSRSL
Trigger: GAGAGACCTTGAAGACTGCAAGCATGAAATGAAAAA...TCTCTGCAATAGTGGTTGGCCTGTTGGTTCCTCAGAATGGAATGGATTGATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS CCA 90 bp TGTTGCACAAAGAATGTCAGAGACCTTGGAGATCATTTAACCCAGTaGTGCTCCACCCTATCCAATCAATGCCCTATTTTTGTAACAAAT +
Preference number: 5 (lower is better)
Translates to: CCTKNVRDLGDHLTQ*CSTLSNQCPIFVTN
Trigger: ATTTGTTACAAAAATAGGGCATTGATTGGATAGGGTGGAGCACCACTGGGTTAAATGATCTCCAAGGTCTCTGACATTCTTTGTGCAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp TGCCCTACTCACCTAACAGTTTTGCTGACAATGAACGAGATAATATTTCTAGCATTAGTGAGTTTCAGCTaGGTATTCTCAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: CPTHLTVLLTMNEIIFLALVSFS*VFSALV
Trigger: GACCAAGGCTGAGAATACCAAGCTGAAACTCACTAA...TGCTAGAAATATTATCTCGTTCATTGTCAGCAAAACTGTTAGGTGAGTAGGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252322.1
CDS-3UTR CAA 90 bp AGCAAATTCATCCATCCACCTACCTACTGTGTTTATGTACCAGGCTTGATAAATTTAGTGAGTTTCAGCTaGGTATTCTCAGCCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SKFIHPPTYCVYVPGLINLVSFS*VFSALV
Trigger: GACCAAGGCTGAGAATACCAAGCTGAAACTCACTAA...ATTTATCAAGCCTGGTACATAAACACAGTAGGTAGGTGGATGGATGAATTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp TACTGTGTTTATGTACCAGGCTTGATAAATACAGAAACAAATGAGACCAGAACTCCAAGTCACATTGAGTaGTTGAGCTGCCTGTGGGTA +
Preference number: 5 (lower is better)
Translates to: YCVYVPGLINTETNETRTPSHIE*LSCLWV
Trigger: TACCCACAGGCAGCTCAACAACTCAATGTGACTTGG...AGTTCTGGTCTCATTTGTTTCTGTATTTATCAAGCCTGGTACATAAACACAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333750.9
CDS-3UTR CAA 90 bp GAACCAACAGGCCAACCACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATGATTTGGCTCCCAAATaGTATCTCATTATTCAGCTA +
Preference number: 5 (lower is better)
Translates to: EPTGQPLLQRFGSQIVSHDLAPK*YLIIQL
Trigger: TAGCTGAATAATGAGATACAATTTGGGAGCCAAATC...ATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTGGTTGGCCTGTTGGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CAA 90 bp ACCACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATTATTCAGCTATTTAACAGGCCAACCACTATaGCAGAGATTTGGCTCCCAA +
Preference number: 5 (lower is better)
Translates to: TTIAEIWLPNCISLFSYLTGQPL*QRFGSQ
Trigger: TTGGGAGCCAAATCTCTGCAATAGTGGTTGGCCTGT...TAAATAGCTGAATAATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS GCA 90 bp TGCACAAAGAATGTCAGAGACCTTGGAGATCATTTAACCCAGTGGTaGTCCACCCTATCCAATCAATGCCCTATTTTTGTAACAAATATT +
Preference number: 5 (lower is better)
Translates to: CTKNVRDLGDHLTQW*STLSNQCPIFVTNI
Trigger: AATATTTGTTACAAAAATAGGGCATTGATTGGATAGGGTGGAGCACCACTGGGTTAAATGATCTCCAAGGTCTCTGACATTCTTTGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 90 bp ATAGTATGGGCGGTGAGAAGAAGAGGATGGATTGGGAAAAGTTGTTaGGTAAATCTTGAAGGAGAATATCAGAGTAAGAAGGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: IVWAVRRRGWIGKSC*VNLEGEYQSKKEEQ
Trigger: TTGTTCTTCCTTCTTACTCTGATATTCTCCTTCAAGATTTACCCAACAACTTTTCCCAATCCATCCTCTTCTTCTCACCGCCCATACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS-3UTR CAA 90 bp CACTATTGCAGAGATTTGGCTCCCAAATTGTATCTCATTATTCAGCTATTTAGATGGAAGCAGCTGTGTTaGCCTTGGCTGCCTTATTTT +
Preference number: 5 (lower is better)
Translates to: HYCRDLAPKLYLIIQLFRWKQLC*PWLPYF
Trigger: AAAATAAGGCAGCCAAGGCAAACACAGCTGCTTCCA...TCTAAATAGCTGAATAATGAGATACAATTTGGGAGCCAAATCTCTGCAATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS TCA 90 bp GTATTGTGTCGGAATGCATCAAATAGTCAACCAATAAACAATGGCTaGGTACCCGACCTTGTGAAGAATGCAAAAGACATAAAATATTCC +
Preference number: 5 (lower is better)
Translates to: VLCRNASNSQPINNG*VPDLVKNAKDIKYS
Trigger: GGAATATTTTATGTCTTTTGCATTCTTCACAAGGTCGGGTACTCAGCCATTGTTTATTGGTTGACTATTTGATGCATTCCGACACAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS-3UTR CAA 90 bp TTCAGCTATTTAGAACAAGAATTCATGATGATCAGGCCCAAAGGTTTTACTGATCACTATTGCAGAGATTaGGCTCCCAAATTGTATCTC +
Preference number: 5 (lower is better)
Translates to: FSYLEQEFMMIRPKGFTDHYCRD*APKLYL
Trigger: GAGATACAATTTGGGAGCCAAATCTCTGCAATAGTG...ATCAGTAAAACCTTTGGGCCTGATCATCATGAATTCTTGTTCTAAATAGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS-3UTR CAA 90 bp AATGGTAGGACCTCATGTCTAATTTATTTTTGGAGGCTTTACAGAACTCAAAAGAGAGTCACTTCCGCTTaGCATATCTTTTTCATTTCA +
Preference number: 5 (lower is better)
Translates to: NGRTSCLIYFWRLYRTQKRVTSA*HIFFIS
Trigger: TGAAATGAAAAAGATATGCAAAGCGGAAGTGACTCT...CTTTTGAGTTCTGTAAAGCCTCCAAAAATAAATTAGACATGAGGTCCTACCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS TCA 72 bp CGAGCCGCGCGGGCTGGACCAGCCCCTCAGCGGAGCTaGACGGGAAGCGGCGCCCCCTGGACGCCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: RAARAGPAPQRS*TGSGAPWTPSG
Trigger: CCCGGAGGGCGTCCAGGGGGCGCCGCTTCCCGTTCAGCTCCGCTGAGGGGCTGGTCCAGCCCGCGCGGCTCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535507.1
CDS GCA 72 bp GCCGCCCGCTCGGCTCTCAGCTGTCAAGCAGCCGCCTaGTCCGCCCGACTCTTTCCGCTCCGAGCCGCGCGG +
Preference number: 6 (lower is better)
Translates to: AARSALSCQAAA*SARLFPLRAAR
Trigger: CCGCGCGGCTCGGAGCGGAAAGAGTCGGGCGGAGCAGGCGGCTGCTTGACAGCTGAGAGCCGAGCGGGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535507.1
CDS CCA 72 bp CTCCGCCCGACTCTTTCCGCTCCGAGCCGCGCGGGCTaGACCAGCCCCTCAGCGGAGCTGAACGGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: LRPTLSAPSRAG*TSPSAELNGKR
Trigger: CCGCTTCCCGTTCAGCTCCGCTGAGGGGCTGGTCCAGCCCGCGCGGCTCGGAGCGGAAAGAGTCGGGCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535507.1
CDS GCA 72 bp GGGCATGACCTTGGGCGTGTAGGCTTCCCGTGGACCTaGCCGCGCCGCCCGCTCGGCTCTCAGCTGTCAAGC +
Preference number: 6 (lower is better)
Translates to: GHDLGRVGFPWT*PRRPLGSQLSS
Trigger: GCTTGACAGCTGAGAGCCGAGCGGGCGGCGCGGGCAGGTCCACGGGAAGCCTACACGCCCAAGGTCATGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000440314.7
ENST00000535507.1
CDS GCA 72 bp GGCCCACCTTTCAACCCCGAGTGGCCTCCAGAGAGCTaGCAGTTGTGGTCATGTTCATCCTGGGCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: GPPFNPEWPPES*QLWSCSSWAAG
Trigger: GCCCGCAGCCCAGGATGAACATGACCACAACTGGCAGCTCTCTGGAGGCCACTCGGGGTTGAAAGGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp AGCACAGGCCAGTGCCCACCGACGCACCTTAGGAAATCCAGCTGCTaGAGGAGCCCGGCCTTCTCACGCTGTAGACTCTCCGTCACACGG +
Preference number: 6 (lower is better)
Translates to: STGQCPPTHLRKSSC*RSPAFSRCRLSVTR
Trigger: CCGTGTGACGGAGAGTCTACAGCGTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAGGTGCGTCGGTGGGCACTGGCCTGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS GCA 72 bp GGCCAGTGCCCACCGACGCACCTTAGGAAATCCAGCTaGTTGAGGAGCCCGGCCTTCTCACGCTGTAGACTC +
Preference number: 6 (lower is better)
Translates to: GQCPPTHLRKSS*LRSPAFSRCRL
Trigger: GAGTCTACAGCGTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAGGTGCGTCGGTGGGCACTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS CCA 72 bp AGCCCACACTTCTTGCCCACTGCGGACACCCACTCCTaGCCAGAATTGTCTGCCACCCCTGGTGAAGCCGCT +
Preference number: 6 (lower is better)
Translates to: SPHFLPTADTHS*PELSATPGEAA
Trigger: AGCGGCTTCACCAGGGGTGGCAGACAATTCTGGCCAGGAGTGGGTGTCCGCAGTGGGCAAGAAGTGTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS TCA 72 bp TTGCAGGCCTCTTGCTGGAGGCTTTCCAACTGCTGCTaGGCATCCTGGAGCTCCCAGGAAGTCCGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LQASCWRLSNCC*ASWSSQEVRSS
Trigger: GCTGGAGCGGACTTCCTGGGAGCTCCAGGATGCTCAGCAGCAGTTGGAAAGCCTCCAGCAAGAGGCCTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000333750.9
ENST00000440314.7
CDS TCA 72 bp AGTGCCCACCGACGCACCTTAGGAAATCCAGCTGCTTaGGGAGCCCGGCCTTCTCACGCTGTAGACTCTCCG +
Preference number: 6 (lower is better)
Translates to: SAHRRTLGNPAA*GARPSHAVDSP
Trigger: CGGAGAGTCTACAGCGTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAGGTGCGTCGGTGGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS GCA 72 bp GGCTCTGGCTGGGCTCATGGAGGAAGAGTGGCAAGTTaGTGCTGCCCCACCCTTGACAAACAGCCCAATGGC +
Preference number: 6 (lower is better)
Translates to: GSGWAHGGRVAS*CCPTLDKQPNG
Trigger: GCCATTGGGCTGTTTGTCAAGGGTGGGGCAGCAGCAACTTGCCACTCTTCCTCCATGAGCCCAGCCAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252322.1
ENST00000440314.7
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp TTCTTGCCCACTGCGGACACCCACTCCTGGCCAGAATaGTCTGCCACCCCTGGTGAAGCCGCTCCCATCAGT +
Preference number: 6 (lower is better)
Translates to: FLPTADTHSWPE*SATPGEAAPIS
Trigger: ACTGATGGGAGCGGCTTCACCAGGGGTGGCAGACAATTCTGGCCAGGAGTGGGTGTCCGCAGTGGGCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp CCTTTCAACCCCGAGTGGCCTCCAGAGAGCTGCCAGTaGTGGTCATGTTCATCCTGGGCTGCGGGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: PFNPEWPPESCQ*WSCSSWAAGRR
Trigger: CCTTCTGCCCGCAGCCCAGGATGAACATGACCACAACTGGCAGCTCTCTGGAGGCCACTCGGGGTTGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp CAGCACACCTGTGTTGAATTCTCCTGGCACTCCTGCTaGATCCCAGCGCTCTGGATCCGGCTCCTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: QHTCVEFSWHSC*IPALWIRLLQG
Trigger: ACCCTGCAGGAGCCGGATCCAGAGCGCTGGGATTCAGCAGGAGTGCCAGGAGAATTCAACACAGGTGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252322.1
ENST00000440314.7
ENST00000514026.2
ENST00000535507.1
CDS GCA 72 bp GATATCCACTCAGGCCCAGGGAGCTTCTCCTTGGGATaGCAAACACCTCCTCCTCCTCCTCTGACTGGCTCC +
Preference number: 6 (lower is better)
Translates to: DIHSGPGSFSLG*QTPPPPPLTGS
Trigger: GGAGCCAGTCAGAGGAGGAGGAGGAGGTGTTTGGCATCCCAAGGAGAAGCTCCCTGGGCCTGAGTGGATATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440314.7
CDS CCA 72 bp GGCTCCTGCAGGGTTTTTCTTGTGCTAAGTGCCCAGTaGAGGCTCTGGCTGGGCTCATGGAGGAAGAGTGGC +
Preference number: 6 (lower is better)
Translates to: GSCRVFLVLSAQ*RLWLGSWRKSG
Trigger: GCCACTCTTCCTCCATGAGCCCAGCCAGAGCCTCCACTGGGCACTTAGCACAAGAAAAACCCTGCAGGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252322.1
ENST00000440314.7
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp TTCAACCCCGAGTGGCCTCCAGAGAGCTGCCAGTTGTaGTCATGTTCATCCTGGGCTGCGGGCAGAAGGATG +
Preference number: 6 (lower is better)
Translates to: FNPEWPPESCQL*SCSSWAAGRRM
Trigger: CATCCTTCTGCCCGCAGCCCAGGATGAACATGACCACAACTGGCAGCTCTCTGGAGGCCACTCGGGGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp TTTGGCCCACCTTTCAACCCCGAGTGGCCTCCAGAGAGCTGCCAGTaGTGGTCATGTTCATCCTGGGCTGCGGGCAGAAGGATGGCTCAA +
Preference number: 6 (lower is better)
Translates to: FGPPFNPEWPPESCQ*WSCSSWAAGRRMAQ
Trigger: TTGAGCCATCCTTCTGCCCGCAGCCCAGGATGAACATGACCACAACTGGCAGCTCTCTGGAGGCCACTCGGGGTTGAAAGGTGGGCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp CTCAGCAGGCACGTTTTTCCAGCACGTAGGCAAGGATaGCCCTCAGACTGGTCCTTCCGACCCCAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: LSRHVFPARRQG*PSDWSFRPQAS
Trigger: AGAAGCCTGGGGTCGGAAGGACCAGTCTGAGGGTCATCCTTGCCTACGTGCTGGAAAAACGTGCCTGCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000333750.9
CDS TCA 72 bp CTGGGCCCCAGCTCAGCACACCTCTCTAGTGAATGCTaGGAACAGAGGACATGCTCCCCTGCTGACACTGCT +
Preference number: 6 (lower is better)
Translates to: LGPSSAHLSSEC*EQRTCSPADTA
Trigger: AGCAGTGTCAGCAGGGGAGCATGTCCTCTGTTCTCAGCATTCACTAGAGAGGTGTGCTGAGCTGGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 72 bp CCTCAGGCCAACTCGGGTGGCAAAAGTACCCGCCATTaGTCCTTCTCAGCAGGTGCCCAACAGATACTGGTG +
Preference number: 6 (lower is better)
Translates to: PQANSGGKSTRH*SFSAGAQQILV
Trigger: CACCAGTATCTGTTGGGCACCTGCTGAGAAGGAGCAATGGCGGGTACTTTTGCCACCCGAGTTGGCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp CATCTTCGCCCATGTCGCCCAGATCCTCATCCCCTCTaGACAGATACACCTTCTCTTCATGGCGCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: HLRPCRPDPHPL*TDTPSLHGAGP
Trigger: TGGCCCAGCGCCATGAAGAGAAGGTGTATCTGTCCAGAGGGGATGAGGATCTGGGCGACATGGGCGAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 72 bp TCCCAGGAAGTCCGCTCCAGCTCCCGGGCCAGCTCCTaGTTAGTGAGTTTCAGCTTGGTATTCTCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: SQEVRSSSRASS*LVSFSLVFSAL
Trigger: CAAGGCTGAGAATACCAAGCTGAAACTCACTAACCAGGAGCTGGCCCGGGAGCTGGAGCGGACTTCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000333750.9
ENST00000440314.7
CDS CCA 72 bp AGGGAGGGTTCCTTTGGCCCACCTTTCAACCCCGAGTaGCCTCCAGAGAGCTGCCAGTTGTGGTCATGTTCA +
Preference number: 6 (lower is better)
Translates to: REGSFGPPFNPE*PPESCQLWSCS
Trigger: TGAACATGACCACAACTGGCAGCTCTCTGGAGGCCACTCGGGGTTGAAAGGTGGGCCAAAGGAACCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp AGGGGCCTCCTATACACCACAGAGGGGTCAGGCCCTGCTGATACCTaGGTTGCAGACCTCTCGCCTCTAGAACTGGGAGACCTGACATTT +
Preference number: 6 (lower is better)
Translates to: RGLLYTTEGSGPADT*VADLSPLELGDLTF
Trigger: AAATGTCAGGTCTCCCAGTTCTAGAGGCGAGAGGTCTGCAACCAAGGTATCAGCAGGGCCTGACCCCTCTGTGGTGTATAGGAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS TCA 72 bp GGTGCTTGTTCCTTTCCCTTAGGAAATCCAGCTGCTTaGGGAGCCCGGCCTTCTCACGCTGTAGACTCTCCG +
Preference number: 6 (lower is better)
Translates to: GACSFPLGNPAA*GARPSHAVDSP
Trigger: CGGAGAGTCTACAGCGTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAGGGAAAGGAACAAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440314.7
ENST00000535292.1
CDS TCA 72 bp GCCACCCCTGGTGAAGCCGCTCCCATCAGTTTCTTATaGGCGCTTTTGTCCCAGTCAGAGAAGCAGACCCTG +
Preference number: 6 (lower is better)
Translates to: ATPGEAAPISFL*ALLSQSEKQTL
Trigger: CAGGGTCTGCTTCTCTGACTGGGACAAAAGCGCTCATAAGAAACTGATGGGAGCGGCTTCACCAGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 72 bp TCCAGGGTCACCAGGTGCTGGGCAGACAGAATTTCCTaGCATTCCTCGATAGTTAAGGCTGCCTGGAACCCC +
Preference number: 6 (lower is better)
Translates to: SRVTRCWADRIS*HSSIVKAAWNP
Trigger: GGGGTTCCAGGCAGCCTTAACTATCGAGGAATGGCAGGAAATTCTGTCTGCCCAGCACCTGGTGACCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp TTTTGGGCTCCAAGTCTGTCCATCAGCATCCGGAACTaGGCTTCCTCATCTTCGCCCATGTCGCCCAGATCC +
Preference number: 6 (lower is better)
Translates to: FWAPSLSISIRN*ASSSSPMSPRS
Trigger: GGATCTGGGCGACATGGGCGAAGATGAGGAAGCCCAGTTCCGGATGCTGATGGACAGACTTGGAGCCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 72 bp TTCCTCCTCTGGAGCACAGCATCCAATGTGTCCAGCTaGGCCCCAGCTCAGCACACCTCTCTAGTGAATGCT +
Preference number: 6 (lower is better)
Translates to: FLLWSTASNVSS*APAQHTSLVNA
Trigger: AGCATTCACTAGAGAGGTGTGCTGAGCTGGGGCCCAGCTGGACACATTGGATGCTGTGCTCCAGAGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp CCTCCAGAGAGCTGCCAGTTGTGGTCATGTTCATCCTaGGCTGCGGGCAGAAGGATGGCTCAATACCTTAGC +
Preference number: 6 (lower is better)
Translates to: PPESCQLWSCSS*AAGRRMAQYLS
Trigger: GCTAAGGTATTGAGCCATCCTTCTGCCCGCAGCCCAGGATGAACATGACCACAACTGGCAGCTCTCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp ACCTCAGGCCAACTCGGGTGGCAAAAGTACCCGCCATaGCTCCTTCTCAGCAGGTGCCCAACAGATACTGGT +
Preference number: 6 (lower is better)
Translates to: TSGQLGWQKYPP*LLLSRCPTDTG
Trigger: ACCAGTATCTGTTGGGCACCTGCTGAGAAGGAGCAATGGCGGGTACTTTTGCCACCCGAGTTGGCCTGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp CTATACACCACAGAGGGGTCAGGCCCTGCTGATACCTaGGTTGCAGACCTCTCGCCTCTAGAACTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: LYTTEGSGPADT*VADLSPLELGD
Trigger: GTCTCCCAGTTCTAGAGGCGAGAGGTCTGCAACCAAGGTATCAGCAGGGCCTGACCCCTCTGTGGTGTATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 90 bp ACGGTACACTTCCATCTCCTTCTCTTGGTGGAGTTTGCAGGCCTCTaGCTGGAGGCTTTCCAACTGCTGCTGAGCATCCTGGAGCTCCCA +
Preference number: 6 (lower is better)
Translates to: TVHFHLLLLVEFAGL*LEAFQLLLSILELP
Trigger: TGGGAGCTCCAGGATGCTCAGCAGCAGTTGGAAAGCCTCCAGCAAGAGGCCTGCAAACTCCACCAAGAGAAGGAGATGGAAGTGTACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000333750.9
ENST00000440314.7
CDS CAA 90 bp CACTCAGCAACCTCAGGCCAACTCGGGTGGCAAAAGTACCCGCCATaGCTCCTTCTCAGCAGGTGCCCAACAGATACTGGTGACAACACT +
Preference number: 6 (lower is better)
Translates to: HSATSGQLGWQKYPP*LLLSRCPTDTGDNT
Trigger: AGTGTTGTCACCAGTATCTGTTGGGCACCTGCTGAGAAGGAGCAATGGCGGGTACTTTTGCCACCCGAGTTGGCCTGAGGTTGCTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS TCA 72 bp AGCACAATGTTGCTAGATGGCAGTCAACGCTCAGGCTaGACGCAAGAGGGTCAGCAAGAGGTGGTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: STMLLDGSQRSG*TQEGQQEVVGK
Trigger: CTTCCCCACCACCTCTTGCTGACCCTCTTGCGTTCAGCCTGAGCGTTGACTGCCATCTAGCAACATTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 72 bp CGAAGGTGCTTGTTCCTTTCCCTTAGGAAATCCAGCTaGTTGAGGAGCCCGGCCTTCTCACGCTGTAGACTC +
Preference number: 6 (lower is better)
Translates to: RRCLFLSLRKSS*LRSPAFSRCRL
Trigger: GAGTCTACAGCGTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAGGGAAAGGAACAAGCACCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440314.7
ENST00000535292.1
CDS GCA 72 bp GCAGCACACATACCTGTCTGTGGCCCTAGACGTGCCTaGTGTCTGTATTCCATCAGGACTCTGGAGTCTCCT +
Preference number: 6 (lower is better)
Translates to: AAHIPVCGPRRA*CLYSIRTLESP
Trigger: AGGAGACTCCAGAGTCCTGATGGAATACAGACAGCAGGCACGTCTAGGGCCACAGACAGGTATGTGTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 72 bp ACCTCCAGGGGGAAAGTGATGCACTCCCAGCCTCTCTaGAAGAGACTGCTCCAAAACTCAACTTCCCGGGAA +
Preference number: 6 (lower is better)
Translates to: TSRGKVMHSQPL*KRLLQNSTSRE
Trigger: TTCCCGGGAAGTTGAGTTTTGGAGCAGTCTCTTCCAGAGAGGCTGGGAGTGCATCACTTTCCCCCTGGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp AGGTGCTTGTTCCTTTCCCTTAGGAAATCCAGCTGCTaGAGGAGCCCGGCCTTCTCACGCTGTAGACTCTCC +
Preference number: 6 (lower is better)
Translates to: RCLFLSLRKSSC*RSPAFSRCRLS
Trigger: GGAGAGTCTACAGCGTGAGAAGGCCGGGCTCCTCAAGCAGCTGGATTTCCTAAGGGAAAGGAACAAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440314.7
ENST00000535292.1
CDS TCA 72 bp GGGCAGCTGTGGTCAGGGCATGACAAGATCAGAAGATaGAGTCCCACAATAGACCGTCTGGAAGCTAGGGAG +
Preference number: 6 (lower is better)
Translates to: GQLWSGHDKIRR*SPTIDRLEARE
Trigger: CTCCCTAGCTTCCAGACGGTCTATTGTGGGACTTCATCTTCTGATCTTGTCATGCCCTGACCACAGCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp GGTGCCCAACAGATACTGGTGACAACACTGCTCCTATaGATGAAGATCCCAGGACCTGGCCCGGTCAAGTGT +
Preference number: 6 (lower is better)
Translates to: GAQQILVTTLLL*MKIPGPGPVKC
Trigger: ACACTTGACCGGGCCAGGTCCTGGGATCTTCATTCATAGGAGCAGTGTTGTCACCAGTATCTGTTGGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 72 bp TCCAGGCACCAGGCTTGTCACTCACACCGAGCGCAGTaGCTGGCATTCAGAAGGTGCTCAATACATGTTCTT +
Preference number: 6 (lower is better)
Translates to: SRHQACHSHRAQ*LAFRRCSIHVL
Trigger: AAGAACATGTATTGAGCACCTTCTGAATGCCAGGCACTGCGCTCGGTGTGAGTGACAAGCCTGGTGCCTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 72 bp TCCGTCACACGGTACACTTCCATCTCCTTCTCTTGGTaGAGTTTGCAGGCCTCTTGCTGGAGGCTTTCCAAC +
Preference number: 6 (lower is better)
Translates to: SVTRYTSISFSW*SLQASCWRLSN
Trigger: GTTGGAAAGCCTCCAGCAAGAGGCCTGCAAACTCCACCAAGAGAAGGAGATGGAAGTGTACCGTGTGACGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000333750.9
ENST00000440314.7
CDS CCA 72 bp AAACTCATACACTCAGCAACCTCAGGCCAACTCGGGTaGCAAAAGTACCCGCCATTGCTCCTTCTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: KLIHSATSGQLG*QKYPPLLLLSR
Trigger: CCTGCTGAGAAGGAGCAATGGCGGGTACTTTTGCCACCCGAGTTGGCCTGAGGTTGCTGAGTGTATGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp TGTGGTCATGTTCATCCTGGGCTGCGGGCAGAAGGATaGCTCAATACCTTAGCTCATAGCCACCACTTCTGG +
Preference number: 6 (lower is better)
Translates to: CGHVHPGLRAEG*LNTLAHSHHFW
Trigger: CCAGAAGTGGTGGCTATGAGCTAAGGTATTGAGCCATCCTTCTGCCCGCAGCCCAGGATGAACATGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp ACACGGTACACTTCCATCTCCTTCTCTTGGTGGAGTTaGCAGGCCTCTTGCTGGAGGCTTTCCAACTGCTGC +
Preference number: 6 (lower is better)
Translates to: TRYTSISFSWWS*QASCWRLSNCC
Trigger: GCAGCAGTTGGAAAGCCTCCAGCAAGAGGCCTGCAAACTCCACCAAGAGAAGGAGATGGAAGTGTACCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000333750.9
ENST00000440314.7
CDS CAA 72 bp GTTGTTCAGTATCTGGTGTCTGGAACTCTCTCTGGATaGCCTGGCAATGAGCTAGTTGGGCCCAGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: VVQYLVSGTLSG*PGNELVGPSSL
Trigger: GAGGCTGCTGGGCCCAACTAGCTCATTGCCAGGCAATCCAGAGAGAGTTCCAGACACCAGATACTGAACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp ATGACGAGGACCCAAGACAGCTGGAAGCCACTCGCCTaGTTGTCCATGGTTGCTCCATGGCGTATTTGTCTC +
Preference number: 6 (lower is better)
Translates to: MTRTQDSWKPLA*LSMVAPWRICL
Trigger: GAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAGCTGTCTTGGGTCCTCGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp AGCATGGTGACGAGAAGCCTTGGCGGGCAAGTCCCGTaGCTGAGGTGTGACTTCAGAGATCAAGTGGAATGT +
Preference number: 6 (lower is better)
Translates to: SMVTRSLGGQVP*LRCDFRDQVEC
Trigger: ACATTCCACTTGATCTCTGAAGTCACACCTCAGCAACGGGACTTGCCCGCCAAGGCTTCTCGTCACCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp ATCCAACAAAGCATGGTGACGAGAAGCCTTGGCGGGCAAGTCCCGTaGCTGAGGTGTGACTTCAGAGATCAAGTGGAATGTGCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: IQQSMVTRSLGGQVP*LRCDFRDQVECALL
Trigger: CAAGAGGGCACATTCCACTTGATCTCTGAAGTCACACCTCAGCAACGGGACTTGCCCGCCAAGGCTTCTCGTCACCATGCTTTGTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp GCTCCTTATGCAGCCTCTGCATATCCTTCCTGGCGATaGAGCCCTTGCCTTCAGCATCACAGGTCTGAAAGA +
Preference number: 6 (lower is better)
Translates to: APYAASAYPSWR*SPCLQHHRSER
Trigger: TCTTTCAGACCTGTGATGCTGAAGGCAAGGGCTTCATCGCCAGGAAGGATATGCAGAGGCTGCATAAGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS TCA 72 bp CTGTCCCACTTGTCCCATACAAAGGAGAGCGATAGGTaGGTGCAGTTCCTCCTCTGGAGCACAGCATCCAAT +
Preference number: 6 (lower is better)
Translates to: LSHLSHTKESDR*VQFLLWSTASN
Trigger: ATTGGATGCTGTGCTCCAGAGGAGGAACTGCACTCACCTATCGCTCTCCTTTGTATGGGACAAGTGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS TCA 72 bp GGGTCCCACTTCCTTCCTTCATCAAGTAGTGTAAAATaGCGAGGACCCAAGACAGCTGGAAGCCACTCGCCT +
Preference number: 6 (lower is better)
Translates to: GSHFLPSSSSVK*RGPKTAGSHSP
Trigger: AGGCGAGTGGCTTCCAGCTGTCTTGGGTCCTCGTCATTTTACACTACTTGATGAAGGAAGGAAGTGGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 72 bp ATCTACAGGCTACGAACAGCCTGCAGGCTTCTGGGTTaGACCTTCACATTAAGGGCTCCAAAACTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: IYRLRTACRLLG*TFTLRAPKLER
Trigger: CCTCTCCAGTTTTGGAGCCCTTAATGTGAAGGTGCAACCCAGAAGCCTGCAGGCTGTTCGTAGCCTGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 72 bp GAGGGCAAGGAGGGTATGGGATACTTCTTTTGTATCTaGACACAGCTGCCAGCACAGAGCAGCACACATACC +
Preference number: 6 (lower is better)
Translates to: EGKEGMGYFFCI*TQLPAQSSTHT
Trigger: GGTATGTGTGCTGCTCTGTGCTGGCAGCTGTGTGCAGATACAAAAGAAGTATCCCATACCCTCCTTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 72 bp GCTGACACTGCTGCCAGTCACTTTCAGGCAGCACCATaGAACACCATTCATATTCACCCCGGCCCTTTGTAT +
Preference number: 6 (lower is better)
Translates to: ADTAASHFQAAP*NTIHIHPGPLY
Trigger: ATACAAAGGGCCGGGGTGAATATGAATGGTGTTCCATGGTGCTGCCTGAAAGTGACTGGCAGCAGTGTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp ACCCAACGCATCCATGTCACCAATACCACATGTAGCTaGTGGCACTGCAGCTTTCTGTTGACCTGCCTGAAC +
Preference number: 6 (lower is better)
Translates to: TQRIHVTNTTCS*WHCSFLLTCLN
Trigger: GTTCAGGCAGGTCAACAGAAAGCTGCAGTGCCACCAGCTACATGTGGTATTGGTGACATGGATGCGTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp ACGAGGACCCAAGACAGCTGGAAGCCACTCGCCTTGTaGTCCATGGTTGCTCCATGGCGTATTTGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: TRTQDSWKPLAL*SMVAPWRICLF
Trigger: AAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAGCTGTCTTGGGTCCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp CGAGGACCCAAGACAGCTGGAAGCCACTCGCCTTGTTGTCCATGGTaGCTCCATGGCGTATTTGTCTCTTTTGTCACATTCTGGACACAA +
Preference number: 6 (lower is better)
Translates to: RGPKTAGSHSPCCPW*LHGVFVSFVTFWTQ
Trigger: TTGTGTCCAGAATGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAGCTGTCTTGGGTCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp CAACTCTTCACACCTGGAGGGTACTTTGGCCACTGGTaGCTTGAATTCCACCATCAGCAAGACTCCTGTGCA +
Preference number: 6 (lower is better)
Translates to: QLFTPGGYFGHW*LEFHHQQDSCA
Trigger: TGCACAGGAGTCTTGCTGATGGTGGAATTCAAGTCACCAGTGGCCAAAGTACCCTCCAGGTGTGAAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS GCA 72 bp ATTGCACTGTGCTCCCAGCTGGATTCAACCTTCTACTaGATCTCATTTCGCTGCTCCCTGCATGTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: IALCSQLDSTFY*ISFRCSLHVSG
Trigger: TCCAGACACATGCAGGGAGCAGCGAAATGAGATGCAGTAGAAGGTTGAATCCAGCTGGGAGCACAGTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp CTACTGCATCTCATTTCGCTGCTCCCTGCATGTGTCTaGAAGAACCGCTTTTCCAGCTCTCCAGGACATTCT +
Preference number: 6 (lower is better)
Translates to: LLHLISLLPACV*KNRFSSSPGHS
Trigger: AGAATGTCCTGGAGAGCTGGAAAAGCGGTTCTTCCAGACACATGCAGGGAGCAGCGAAATGAGATGCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp TTCCACTTTTCAGCTCCCGAGATGAAAGCCTGGACATaGCAAGGCAGGGGCTGCAATCTCAAGCATACAGAA +
Preference number: 6 (lower is better)
Translates to: FHFSAPEMKAWT*QGRGCNLKHTE
Trigger: TTCTGTATGCTTGAGATTGCAGCCCCTGCCTTGCCATGTCCAGGCTTTCATCTCGGGAGCTGAAAAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 72 bp CCCAAGACAGCTGGAAGCCACTCGCCTTGTTGTCCATaGTTGCTCCATGGCGTATTTGTCTCTTTTGTCACA +
Preference number: 6 (lower is better)
Translates to: PKTAGSHSPCCP*LLHGVFVSFVT
Trigger: TGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAGCTGTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp GGCACACTCCAGTTCATTCTTCTCCTCATGGGCTTCTaGGAGCTGGGAGATGATTCTGGTCAGGAAGTCTTC +
Preference number: 6 (lower is better)
Translates to: GTLQFILLLMGF*ELGDDSGQEVF
Trigger: GAAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATGAACTGGAGTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CAA 72 bp GCTGGAAGAATGCTAACTCTCAGGATGAGTGATACTTaGGGAGACCCCCAGCCCCCAGCTTACAGGATAAAC +
Preference number: 6 (lower is better)
Translates to: AGRMLTLRMSDT*GDPQPPAYRIN
Trigger: GTTTATCCTGTAAGCTGGGGGCTGGGGGTCTCCCAAAGTATCACTCATCCTGAGAGTTAGCATTCTTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp CTGGAAGCCACTCGCCTTGTTGTCCATGGTTGCTCCATGGCGTATTaGTCTCTTTTGTCACATTCTGGACACAACCCAACGCATCCATGT +
Preference number: 6 (lower is better)
Translates to: LEATRLVVHGCSMAY*SLLSHSGHNPTHPC
Trigger: ACATGGATGCGTTGGGTTGTGTCCAGAATGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp AGATTAACAGAAATGGGCCGAGTGGGCAGGGGCCGATaGAGAAGAATCGCTTTCATATTAAGTCTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RLTEMGRVGRGR*RRIAFILSLPS
Trigger: GGAGGGCAGACTTAATATGAAAGCGATTCTTCTTCATCGGCCCCTGCCCACTCGGCCCATTTCTGTTAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 72 bp GCTCCTTACATAACAGTTTCTGCTCCAGCTCTTGACTaGGGGCTTGAAACCTCTCTGTGTCCTTCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: APYITVSAPALD*GLETSLCPSGE
Trigger: TTCTCCTGAAGGACACAGAGAGGTTTCAAGCCCGCAGTCAAGAGCTGGAGCAGAAACTGTTATGTAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000333750.9
ENST00000440314.7
CDS GCA 72 bp ATTCAACCTTCTACTGCATCTCATTTCGCTGCTCCCTaGATGTGTCTGGAAGAACCGCTTTTCCAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: IQPSTASHFAAP*MCLEEPLFQLS
Trigger: GGAGAGCTGGAAAAGCGGTTCTTCCAGACACATGCAGGGAGCAGCGAAATGAGATGCAGTAGAAGGTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp GCACACTCCAGTTCATTCTTCTCCTCATGGGCTTCTTaGAGCTGGGAGATGATTCTGGTCAGGAAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: AHSSSFFSSWAS*SWEMILVRKSS
Trigger: TGAAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATGAACTGGAGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 72 bp CTTTTTAGGGCACACTCCAGTTCATTCTTCTCCTCATaGGCTTCTTGGAGCTGGGAGATGATTCTGGTCAGG +
Preference number: 6 (lower is better)
Translates to: LFRAHSSSFFSS*ASWSWEMILVR
Trigger: CCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATGAACTGGAGTGTGCCCTAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252322.1
ENST00000333750.9
ENST00000440314.7
CDS CCA 72 bp GACAACACTGCTCCTATGAATGAAGATCCCAGGACCTaGCCCGGTCAAGTGTATTGTGTCGGAATGCATCAA +
Preference number: 6 (lower is better)
Translates to: DNTAPMNEDPRT*PGQVYCVGMHQ
Trigger: TTGATGCATTCCGACACAATACACTTGACCGGGCCAGGTCCTGGGATCTTCATTCATAGGAGCAGTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp GCACCATGGAACACCATTCATATTCACCCCGGCCCTTaGTATGTCCCTAGTCTTGTCACTGTGAATGAGCTC +
Preference number: 6 (lower is better)
Translates to: APWNTIHIHPGP*YVPSLVTVNEL
Trigger: GAGCTCATTCACAGTGACAAGACTAGGGACATACAAAGGGCCGGGGTGAATATGAATGGTGTTCCATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp CTCAGATTTCCTGTTACAGACCTGCGCATGGGTTCCTaGCTTTGCGGTCACTGCATATTGTACTGTGCCCTT +
Preference number: 6 (lower is better)
Translates to: LRFPVTDLRMGS*LCGHCILYCAL
Trigger: AAGGGCACAGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAGGTCTGTAACAGGAAATCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp TCCTCCTCTGACTGGCTCCTAAGAATCCCTCTGCTGTCCACATATTaGCCTATCACAGAGCCAGATCTCTTTTTCCAACTTGCCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SSSDWLLRIPLLSTY*PITEPDLFFQLALE
Trigger: TTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAGAGGGATTCTTAGGAGCCAGTCAGAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440314.7
CDS CAA 90 bp AGACCCTCAGGAGAAATGCTGTTTTCTTATCCTCATTCAGAACATTaGTTTGTTTGGCCCAGCCTTCTCACAGGCGGCTGCTCCCAGTAC +
Preference number: 6 (lower is better)
Translates to: RPSGEMLFSYPHSEH*FVWPSLLTGGCSQY
Trigger: GTACTGGGAGCAGCCGCCTGTGAGAAGGCTGGGCCAAACAAACAAATGTTCTGAATGAGGATAAGAAAACAGCATTTCTCCTGAGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 90 bp CTCACCCACGACCAGCAGATGCCACAGAAGTCACTCTTAACTAAATaGCACTGTGCTCCCAGCTGGATTCAACCTTCTACTGCATCTCAT +
Preference number: 6 (lower is better)
Translates to: LTHDQQMPQKSLLTK*HCAPSWIQPSTASH
Trigger: ATGAGATGCAGTAGAAGGTTGAATCCAGCTGGGAGCACAGTGCAATTTAGTTAAGAGTGACTTCTGTGGCATCTGCTGGTCGTGGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 90 bp TGGCAGCATTGGATCCAAGCTTTACTAGGTGTGGAGACAAGTAGGTaGTTCAGTATCTGGTGTCTGGAACTCTCTCTGGATTGCCTGGCA +
Preference number: 6 (lower is better)
Translates to: WQHWIQALLGVETSR*FSIWCLELSLDCLA
Trigger: TGCCAGGCAATCCAGAGAGAGTTCCAGACACCAGATACTGAACAACCTACTTGTCTCCACACCTAGTAAAGCTTGGATCCAATGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 72 bp AGACAGCTGGAAGCCACTCGCCTTGTTGTCCATGGTTaGTCCATGGCGTATTTGTCTCTTTTGTCACATTCT +
Preference number: 6 (lower is better)
Translates to: RQLEATRLVVHG*SMAYLSLLSHS
Trigger: AGAATGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAGCTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 72 bp TCAGATTTCCTGTTACAGACCTGCGCATGGGTTCCTTaGTTTGCGGTCACTGCATATTGTACTGTGCCCTTT +
Preference number: 6 (lower is better)
Translates to: SDFLLQTCAWVP*FAVTAYCTVPF
Trigger: AAAGGGCACAGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAGGTCTGTAACAGGAAATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp ACTCGCCTTGTTGTCCATGGTTGCTCCATGGCGTATTaGTCTCTTTTGTCACATTCTGGACACAACCCAACG +
Preference number: 6 (lower is better)
Translates to: TRLVVHGCSMAY*SLLSHSGHNPT
Trigger: CGTTGGGTTGTGTCCAGAATGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp AAGACAGCTGGAAGCCACTCGCCTTGTTGTCCATGGTaGCTCCATGGCGTATTTGTCTCTTTTGTCACATTC +
Preference number: 6 (lower is better)
Translates to: KTAGSHSPCCPW*LHGVFVSFVTF
Trigger: GAATGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAGCTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp ATTTCCTGTTACAGACCTGCGCATGGGTTCCTTGCTTaGCGGTCACTGCATATTGTACTGTGCCCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: ISCYRPAHGFLA*RSLHIVLCPFQ
Trigger: CTGAAAAGGGCACAGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAGGTCTGTAACAGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp TGTAAAATGACGAGGACCCAAGACAGCTGGAAGCCACTCGCCTTGTaGTCCATGGTTGCTCCATGGCGTATTTGTCTCTTTTGTCACATT +
Preference number: 6 (lower is better)
Translates to: CKMTRTQDSWKPLAL*SMVAPWRICLFCHI
Trigger: AATGTGACAAAAGAGACAAATACGCCATGGAGCAACCATGGACAACAAGGCGAGTGGCTTCCAGCTGTCTTGGGTCCTCGTCATTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp TCTCTCTGTGGCCATCTCCTAAGAATCCCTCTGCTGTCCACATATTaGCCTATCACAGAGCCAGATCTCTTTTTCCAACTTGCCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SLCGHLLRIPLLSTY*PITEPDLFFQLALE
Trigger: TTCCAGGGCAAGTTGGAAAAAGAGATCTGGCTCTGTGATAGGCAAATATGTGGACAGCAGAGGGATTCTTAGGAGATGGCCACAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535292.1
CDS CAA 90 bp GTCACGTTAGTTATGAGACCACAGACGCATTGTCACCCACCTTTTTaGCAGTATGTAGCCATCTGGCCCATTTTCAGAGCTGCTCTTATC +
Preference number: 6 (lower is better)
Translates to: VTLVMRPQTHCHPPF*QYVAIWPIFRAALI
Trigger: GATAAGAGCAGCTCTGAAAATGGGCCAGATGGCTACATACTGCAAAAAAGGTGGGTGACAATGCGTCTGTGGTCTCATAACTAACGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp CATTCTTCTCCTCATGGGCTTCTTGGAGCTGGGAGATaGTTCTGGTCAGGAAGTCTTCAAAGTTGGACAGTA +
Preference number: 6 (lower is better)
Translates to: HSSPHGLLGAGR*FWSGSLQSWTV
Trigger: TACTGTCCAACTTTGAAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS TCA 72 bp TTTGTCCCAGTCAGAGAAGCAGACCCTGTGGGATGTTaGGCCTATTCTGCAGCAATCAATGAATCTGACAAG +
Preference number: 6 (lower is better)
Translates to: FVPVREADPVGC*AYSAAINESDK
Trigger: CTTGTCAGATTCATTGATTGCTGCAGAATAGGCTCAACATCCCACAGGGTCTGCTTCTCTGACTGGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS TCA 72 bp CTGGGTTCTGATCCTAGTTCTTCTGTGTGCGAGTTATaGGTCTTGGTGAAGCCACTTCACTCTGCTACTGTT +
Preference number: 6 (lower is better)
Translates to: LGSDPSSSVCEL*VLVKPLHSATV
Trigger: AACAGTAGCAGAGTGAAGTGGCTTCACCAAGACTCATAACTCGCACACAGAAGAACTAGGATCAGAACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 72 bp GAGAGAGAGCGAGCACACACTTGGCATGTCATCTTGTaGAGGAGCCATGCTAATCTTCTTTGTATCATTCCA +
Preference number: 6 (lower is better)
Translates to: ERERAHTWHVIL*RSHANLLCIIP
Trigger: TGGAATGATACAAAGAAGATTAGCATGGCTCCTGCACAAGATGACATGCCAAGTGTGTGCTCGCTCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 72 bp TCCAGTTCATTCTTCTCCTCATGGGCTTCTTGGAGCTaGGAGATGATTCTGGTCAGGAAGTCTTCAAAGTTG +
Preference number: 6 (lower is better)
Translates to: SSSFFSSWASWS*EMILVRKSSKL
Trigger: CAACTTTGAAGACTTCCTGACCAGAATCATCTCCCAGCTCCAAGAAGCCCATGAGGAGAAGAATGAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252322.1
ENST00000440314.7
CDS CCA 72 bp TTACTAGGTGTGGAGACAAGTAGGTTGTTCAGTATCTaGTGTCTGGAACTCTCTCTGGATTGCCTGGCAATG +
Preference number: 6 (lower is better)
Translates to: LLGVETSRLFSI*CLELSLDCLAM
Trigger: CATTGCCAGGCAATCCAGAGAGAGTTCCAGACACCAGATACTGAACAACCTACTTGTCTCCACACCTAGTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp ACATTAAGGGCTCCAAAACTGGAGAGGCAGAAAAGTTaGCAGCATTGGATCCAAGCTTTACTAGGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: TLRAPKLERQKS*QHWIQALLGVE
Trigger: CTCCACACCTAGTAAAGCTTGGATCCAATGCTGCCAACTTTTCTGCCTCTCCAGTTTTGGAGCCCTTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CCA 72 bp GATGAAGTCTCAGATTTCCTGTTACAGACCTGCGCATaGGTTCCTTGCTTTGCGGTCACTGCATATTGTACT +
Preference number: 6 (lower is better)
Translates to: DEVSDFLLQTCA*VPCFAVTAYCT
Trigger: AGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAGGTCTGTAACAGGAAATCTGAGACTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp GGAGAAATGCTGTTTTCTTATCCTCATTCAGAACATTaGTTTGTTTGGCCCAGCCTTCTCACAGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: GEMLFSYPHSEH*FVWPSLLTGGC
Trigger: GCAGCCGCCTGTGAGAAGGCTGGGCCAAACAAACAAATGTTCTGAATGAGGATAAGAAAACAGCATTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp CACATTAAGGGCTCCAAAACTGGAGAGGCAGAAAAGTaGGCAGCATTGGATCCAAGCTTTACTAGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: HIKGSKTGEAEK*AALDPSFTRCG
Trigger: TCCACACCTAGTAAAGCTTGGATCCAATGCTGCCAACTTTTCTGCCTCTCCAGTTTTGGAGCCCTTAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS CAA 72 bp CTGCGCATGGGTTCCTTGCTTTGCGGTCACTGCATATaGTACTGTGCCCTTTTCAGTTCAGTGTATATTTGG +
Preference number: 6 (lower is better)
Translates to: LRMGSLLCGHCI*YCALFSSVYIW
Trigger: CCAAATATACACTGAACTGAAAAGGGCACAGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp GTTACAGACCTGCGCATGGGTTCCTTGCTTTGCGGTCACTGCATATaGTACTGTGCCCTTTTCAGTTCAGTGTATATTTGGAAATGCTCT +
Preference number: 6 (lower is better)
Translates to: VTDLRMGSLLCGHCI*YCALFSSVYIWKCS
Trigger: AGAGCATTTCCAAATATACACTGAACTGAAAAGGGCACAGTACAATATGCAGTGACCGCAAAGCAAGGAACCCATGCGCAGGTCTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp ATCCTAGTTCTTCTGTGTGCGAGTTATGAGTCTTGGTaGAGCCACTTCACTCTGCTACTGTTTCCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: ILVLLCASYESW*SHFTLLLFPCL
Trigger: CAGACAAGGAAACAGTAGCAGAGTGAAGTGGCTTCACCAAGACTCATAACTCGCACACAGAAGAACTAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 72 bp TTTGCAGTATGTAGCCATCTGGCCCATTTTCAGAGCTaGTCTTATCTTTGTCACGACTATCATCTCCACAGC +
Preference number: 6 (lower is better)
Translates to: FAVCSHLAHFQS*SYLCHDYHLHS
Trigger: GCTGTGGAGATGATAGTCGTGACAAAGATAAGAGCAGCTCTGAAAATGGGCCAGATGGCTACATACTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 72 bp AGAGAGAGAGAGCGAGCACACACTTGGCATGTCATCTaGTGCAGGAGCCATGCTAATCTTCTTTGTATCATT +
Preference number: 6 (lower is better)
Translates to: RERERAHTWHVI*CRSHANLLCII
Trigger: AATGATACAAAGAAGATTAGCATGGCTCCTGCACAAGATGACATGCCAAGTGTGTGCTCGCTCTCTCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 72 bp AAGTCACTCTTAACTAAATTGCACTGTGCTCCCAGCTaGATTCAACCTTCTACTGCATCTCATTTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: KSLLTKLHCAPS*IQPSTASHFAA
Trigger: AGCAGCGAAATGAGATGCAGTAGAAGGTTGAATCCAGCTGGGAGCACAGTGCAATTTAGTTAAGAGTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000514026.2
ENST00000535507.1
CDS GCA 72 bp AATGTCAGAGACCTTGGAGATCATTTAACCCAGTGGTaGTCCACCCTATCCAATCAATGCCCTATTTTTGTA +
Preference number: 6 (lower is better)
Translates to: NVRDLGDHLTQW*STLSNQCPIFV
Trigger: TACAAAAATAGGGCATTGATTGGATAGGGTGGAGCACCACTGGGTTAAATGATCTCCAAGGTCTCTGACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CCA 72 bp AAGAATGTCAGAGACCTTGGAGATCATTTAACCCAGTaGTGCTCCACCCTATCCAATCAATGCCCTATTTTT +
Preference number: 6 (lower is better)
Translates to: KNVRDLGDHLTQ*CSTLSNQCPIF
Trigger: AAAAATAGGGCATTGATTGGATAGGGTGGAGCACCACTGGGTTAAATGATCTCCAAGGTCTCTGACATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS CAA 90 bp TATACACAGAGAGAGAGAGAGCGAGCACACACTTGGCATGTCATCTaGTGCAGGAGCCATGCTAATCTTCTTTGTATCATTCCAATTTTA +
Preference number: 6 (lower is better)
Translates to: YTQRERERAHTWHVI*CRSHANLLCIIPIL
Trigger: TAAAATTGGAATGATACAAAGAAGATTAGCATGGCTCCTGCACAAGATGACATGCCAAGTGTGTGCTCGCTCTCTCTCTCTCTGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS GCA 72 bp AATATGTCTGTCAATATGTACGTGCTCATGCATGCCTaGACTGGAACACATAATGAAGTAGTCAACACTTCC +
Preference number: 6 (lower is better)
Translates to: NMSVNMYVLMHA*TGTHNEVVNTS
Trigger: GGAAGTGTTGACTACTTCATTATGTGTTCCAGTGCAGGCATGCATGAGCACGTACATATTGACAGACATATT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2
CDS TCA 72 bp AACATGTTTCCAGTCTGGAAATCCCACCCACTGTGTTaGGGCATATATTCGGTCTTTAGCAGTAAAGAAAAA +
Preference number: 6 (lower is better)
Translates to: NMFPVWKSHPLC*GIYSVFSSKEK
Trigger: TTTTTCTTTACTGCTAAAGACCGAATATATGCCTCAACACAGTGGGTGGGATTTCCAGACTGGAAACATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514026.2