RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CRACDL (Homo sapiens)

Ensembl gene IDs: ENSG00000196872

Ensembl transcript IDs: ENST00000397899.7, ENST00000415261.5, ENST00000420294.1, ENST00000423771.5, ENST00000428096.5, ENST00000462314.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTTTCAATGTTGTTCTTGTTTCTGGGCCCTCTGGCCCAGGAGTATaGCTGTGTGTTTATCCTCTTTGTTTTGCCTGGTTCCTTCCTCTT +
Preference number: 1 (lower is better)
Translates to: FFNVVLVSGPSGPGV*LCVYPLCFAWFLPL
Trigger: AAGAGGAAGGAACCAGGCAAAACAAAGAGGATAAACACACAGCCATACTCCTGGGCCAGAGGGCCCAGAAACAAGAACAACATTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR CCA 90 bp TTTCACAGTTTGTTTGCCACAATACACTGGCAGTTTTTAACTAAGTaGCTTGTCAGGGTAGTGGACATGCTTTATCAGCACACTGCCCAC +
Preference number: 1 (lower is better)
Translates to: FHSLFATIHWQFLTK*LVRVVDMLYQHTAH
Trigger: GTGGGCAGTGTGCTGATAAAGCATGTCCACTACCCTGACAAGCCACTTAGTTAAAAACTGCCAGTGTATTGTGGCAAACAAACTGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR TCA 90 bp GATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATaGATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATCCAC +
Preference number: 1 (lower is better)
Translates to: DCFIAALGNGIPVLP*MSCLVVNMKEDRIH
Trigger: GTGGATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR CCA 90 bp ATAAAATCAATCTTTAAGTTTCACAGTTTGTTTGCCACAATACACTaGCAGTTTTTAACTAAGTGGCTTGTCAGGGTAGTGGACATGCTT +
Preference number: 1 (lower is better)
Translates to: IKSIFKFHSLFATIH*QFLTKWLVRVVDML
Trigger: AAGCATGTCCACTACCCTGACAAGCCACTTAGTTAAAAACTGCCAGTGTATTGTGGCAAACAAACTGTGAAACTTAAAGATTGATTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR CAA 90 bp CCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTaGTTTCTGGGCCCTCTGGCCCAGGAGTATGGCTGTGTGTTTATC +
Preference number: 2 (lower is better)
Translates to: PLGTGTGSWTFSMLF*FLGPLAQEYGCVFI
Trigger: GATAAACACACAGCCATACTCCTGGGCCAGAGGGCCCAGAAACAAGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAAGAGCGACCAGAGACATaGGCTGATCTCAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKERPET*ADLSWK
Trigger: CTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTC...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CCA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATTGGGCTGATCTCAGCTaGAAGCACAGATGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNWADLS*KHRCPF
Trigger: GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCA...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CCA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCCAGTTTTTAACTAAGTaGCTTGTCAGGGTAGTGGAC +
Preference number: 2 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFQFLTK*LVRVVD
Trigger: GTCCACTACCCTGACAAGCCACTTAGTTAAAAACTG...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CCA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATACACATTCGTACCTTTaGGCACAGGAACTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDTHSYL*AQELVP
Trigger: AGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGT...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CCA 90 bp TCTGGCCCAGGAGTATGGCTGTGTGTTTATCCTCTTTGTTTTGCCTGGTTCCTTTTTGCCACAATACACTaGCAGTTTTTAACTAAGTGG +
Preference number: 2 (lower is better)
Translates to: SGPGVWLCVYPLCFAWFLFATIH*QFLTKW
Trigger: CCACTTAGTTAAAAACTGCCAGTGTATTGTGGCAAA...AAGGAACCAGGCAAAACAAAGAGGATAAACACACAGCCATACTCCTGGGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR GCA 90 bp GAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAAGTTTCACAGTTTGTTTaGCACAATACACTGGCAGTT +
Preference number: 2 (lower is better)
Translates to: EKTHSYLWAQELVPGLFQVSQFV*HNTLAV
Trigger: AACTGCCAGTGTATTGTGGCAAACAAACTGTGAAAC...TTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAAACAGGAACTGGTTCCTaGACTTTTTCAATGTTGTTC +
Preference number: 2 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKTGTGS*TFSMLF
Trigger: GAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGT...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR TCA 72 bp GGATCCACAGGCAAGAGAGCGACCAGAGACATGGGCTaGTCTCAGCTGGAAGCACAGATGTCCCTTCTCCTA +
Preference number: 3 (lower is better)
Translates to: GSTGKRATRDMG*SQLEAQMSLLL
Trigger: TAGGAGAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCTTGCCTGTGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CAA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTGACACATTCGTACCTTaGGGCACAGGAACTGGTTCC +
Preference number: 3 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRDTFVP*GTGTGS
Trigger: GGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTC...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CAA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCTTTAAGTTTCACAGTTaGTTTGCCACAATACACTGG +
Preference number: 3 (lower is better)
Translates to: RERPETWADLSWKHRCPFFKFHS*FATIHW
Trigger: CCAGTGTATTGTGGCAAACAAACTGTGAAACTTAAA...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR TCA 72 bp ATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATaGATGTCATGCCTCGTAGTAAACATGAAAGAAGAC +
Preference number: 3 (lower is better)
Translates to: IAALGNGIPVLP*MSCLVVNMKED
Trigger: GTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR-3UTR CAA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCAAGTTTCACAGTTTGTTaGCCACAATACACTGGCAGT +
Preference number: 3 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSSFTVC*PQYTGS
Trigger: ACTGCCAGTGTATTGTGGCAAACAAACTGTGAAACT...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCGGGGGCGCGGGCTGGTaGGGGAGCGTGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFGGAGW*GSVKLC
Trigger: GCAGAGCTTCACGCTCCCGCACCAGCCCGCGCCCCC...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCAGCGCGGAGGAGTGCTaGAGGCGGGCGCGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFSAEEC*RRARLA
Trigger: TGCCAGACGCGCCCGCCTGCAGCACTCCTCCGCGCT...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCTCGGGGCGGGCGCCGTaGAGGGCTCGGTCCCAATTC +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFSGRAP*RARSQF
Trigger: GAATTGGGACCGAGCCCTCCACGGCGCCCGCCCCGA...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCCGGGACACTGCGTTCTaGCCCGTCGCGAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFRDTAF*PVASRG
Trigger: CCCTCTGCTCGCGACGGGCCAGAACGCAGTGTCCCG...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TGCCTCGTAGTAAACATGAAAGAAGACAGGATCCACAGGCAAGAGAGCGACCAGGGGCGACGCAGCAGGTaGCCGCGCGGCCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: CLVVNMKEDRIHRQESDQGRRSR*PRGLQT
Trigger: TGTCTGGAGGCCGCGCGGCCACCTGCTGCGTCGCCC...CTGGTCGCTCTCTTGCCTGTGGATCCTGTCTTCTTTCATGTTTACTACGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCAGGTGGACCGGAGCTTaGCGGGGAAGGGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFRWTGA*RGRGFC
Trigger: ACAGAAACCCCTTCCCCGTCAAGCTCCGGTCCACCT...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCCCAGGACCCACGTCGTaGAGCAGAGACATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFPGPTS*SRDISG
Trigger: CCCAGAGATGTCTCTGCTGCACGACGTGGGTCCTGG...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTGGCGCCTCCCCATCCTaGTTTCCGCCGTCGGGACCG +
Preference number: 4 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRGASPS*FPPSGP
Trigger: CGGTCCCGACGGCGGAAAGCAGGATGGGGAGGCGCC...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCTTTTCTCCGCCGTCCTaGGCTCCTTCCTGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFFSPPS*APSWVP
Trigger: GGGAACCCAGGAAGGAGCCCAGGACGGCGGAGAAAA...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TGTCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGGCTGGACGCGGGCGCTaGCACTACCCTCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: CLRLLYQGNSKRHIRTFGAGRGR*HYPPAA
Trigger: GGCCGCGGGAGGGTAGTGTCAGCGCCCGCGTCCAGC...CCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTGAGAAAGGGCCCGGCTaGCCAGCGTGCCCCTCGACT +
Preference number: 4 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPREKGPG*PACPST
Trigger: AGTCGAGGGGCACGCTGGGCAGCCGGGCCCTTTCTC...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCGTGAGCGCGGAGGAGTaGTGCAGGCGGGCGCGTCTG +
Preference number: 4 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFVSAEE*CRRARL
Trigger: CAGACGCGCCCGCCTGCAGCACTCCTCCGCGCTCAC...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTCCTCCGCCTTGTCCGTaGCCGGGGCACACGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSPPPCP*PGHTGL
Trigger: CAGGCCCGTGTGCCCCGGCCACGGACAAGGCGGAGG...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp ACCCTGCCGTGTTCCTTCATCTCCTTCTCAGAGTGGCTGTCTTTAGGAAAACAGTCCTGGTTGGGTGGCTaGTCCAAGGTCCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TLPCSFISFSEWLSLGKQSWLGG*SKVPLR
Trigger: GCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGA...CTGTTTTCCTAAAGACAGCCACTCTGAGAAGGAGATGAAGGAACACGGCAGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTCCTCCTCCTCTGGGGTaGACGTCAGGTCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRPPPLG*TSGRSG
Trigger: CCCTGAGCGACCTGACGTGCACCCCAGAGGAGGAGG...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTCTGGCGCCACGTCCTaGTGCCCAGAGCTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSSGATS*CPELGR
Trigger: GCGCCCCAGCTCTGGGCAGCAGGACGTGGCGCCAGA...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCGTCGCTCACGTGGTCTaGAGACACGACAGAGACCTT +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFVAHVV*RHDRDL
Trigger: AAGGTCTCTGTCGTGTCTCCAGACCACGTGAGCGAC...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCACGGCAAGGGCGCCGGTaGCCCAGGCTCAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWARQGRR*PRLRAS
Trigger: AGAGGCCCTGAGCCTGGGCCACCGGCGCCCTTGCCG...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCAGCTCCACGCGGAGAGTaGGGGCCGACTCGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWAAPRGE*GPTRAR
Trigger: CCGAGCCCGAGTCGGCCCCCACTCTCCGCGTGGAGC...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGGCCCAGGAGTATGGCTGTGTGTTTATCCTCTTTGTTTTGCCTGGTTCCTTCCTCAGGGATGGCGGTaGGAAACGGGCTCGCGACGT +
Preference number: 4 (lower is better)
Translates to: SGPGVWLCVYPLCFAWFLPQGWR*ETGSRR
Trigger: ACGTCGCGAGCCCGTTTCCCACCGCCATCCCTGAGG...AAGGAACCAGGCAAAACAAAGAGGATAAACACACAGCCATACTCCTGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTAGGGCGCCTCTGAGGTaGCGGCGGGGTCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSRAPLR*RRGQSR
Trigger: CCGAGACTGACCCCGCCGCCACCTCAGAGGCGCCCT...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTGTTGTTTCAGGCAGCTCTTaGGCGCCGGCGGGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RTFGHRNWFLDFFNVVLVVSGSS*APAGSG
Trigger: CCCCGAGCCCGCCGGCGCCCAAGAGCTGCCTGAAAC...AACAAGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCGGCTCGGGGAGACCCTaGAGGTCGTCAAGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFGSGRP*RSSRAA
Trigger: GGCGGCTCTTGACGACCTCCAGGGTCTCCCCGAGCC...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATCGGCTCCTGGGCGGCTaGGCAGGGCTCTCTCGTGCC +
Preference number: 4 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDRLLGG*AGLSRA
Trigger: GGCACGAGAGAGCCCTGCCCAGCCGCCCAGGAGCCG...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCACTGCTCCCGCCGCGGTaGGCGTCTAGCCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSLLPPR*ASSPSP
Trigger: TGGGCTGGGGCTAGACGCGCACCGCGGCGGGAGCAG...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATCCCGGCTGCCCAGCGTaGCCCTCGACTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDPGCPA*PSTPPA
Trigger: AGCTGGAGGAGTCGAGGGGCACGCTGGGCAGCCGGG...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTCGTCCTCAGAGCTCATaGCGGCATCCTCTCCCCGCT +
Preference number: 4 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRRPQSS*RHPLPA
Trigger: AGCGGGGAGAGGATGCCGGCATGAGCTCTGAGGACG...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TGTCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGGGGCCAGGTTTCGCGTaGTGGGGCTCGGGGAGACCC +
Preference number: 4 (lower is better)
Translates to: CLRLLYQGNSKRHIRTFGGPGFA*WGSGRP
Trigger: GGGTCTCCCCGAGCCCCAGCACGCGAAACCTGGCCC...CCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TGTTTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAAGCTGGGACAGGAGCGTaGCCCGGGCTCGGCGAGACG +
Preference number: 4 (lower is better)
Translates to: CFAWFLPLPQVRHNLMIKAGTGA*PGLGET
Trigger: CGTCTCGCCGAGCCCGGGCCACGCTCCTGTCCCAGC...TTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGGCCCAGGAGTATGGCTGTGTGTTTATCCTCTTTGTTTTGCCTGGTTCCTTCCTTTCCTTGGTCGCTaGGGGCCCTGGTGCCTCGAA +
Preference number: 4 (lower is better)
Translates to: SGPGVWLCVYPLCFAWFLPFLGR*GPWCLE
Trigger: TTCGAGGCACCAGGGCCCCCAGCGACCAAGGAAAGG...AAGGAACCAGGCAAAACAAAGAGGATAAACACACAGCCATACTCCTGGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTTGCCAGGCTGTTGTCTaGGATCCGGGCAGAGACGGT +
Preference number: 4 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRCQAVV*DPGRDG
Trigger: ACCGTCTCTGCCCGGATCTCAGACAACAGCCTGGCA...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCACCTCCACGCTGGCCGTaGGCGCGGAGGAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSPPRWP*ARRSAA
Trigger: TGCAGCACTCCTCCGCGCTCACGGCCAGCGTGGAGG...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TGTCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCAGACAGCCCGGGTCTaGGGCCGAAGAGCTGGACGC +
Preference number: 4 (lower is better)
Translates to: CLRLLYQGNSKRHIRTFGQTARV*GRRAGR
Trigger: GCGTCCAGCTCTTCGGCCGCAGACCCGGGCTGTCTG...CCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAAGGCGCCACGTCCTGCTaGCCAGAGCTGGGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKGATSC*PELGRS
Trigger: AGAGCGCCCCAGCTCTGGGCAGCAGGACGTGGCGCC...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp ACCCTGCCGTGTTCCTTCATCTCCTTCTCAGAGTGGCTGTCTTTAGGAAAACAGTCCAGGCCCTGTTGCTaGAGGCGGCAGACTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TLPCSFISFSEWLSLGKQSRPCC*RRQTLF
Trigger: GAAAAGAGTCTGCCGCCTGCAGCAACAGGGCCTGGA...CTGTTTTCCTAAAGACAGCCACTCTGAGAAGGAGATGAAGGAACACGGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCACGGCATCCCTGTTTTaGCATGAATGTCATGCCTCG +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFTASLF*HECHAS
Trigger: CGAGGCATGACATTCATGGCAAAACAGGGATGCCGT...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTCAGCAGAGACATCTCTaGGGGGCTCCTGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSQQRHL*GAPGQP
Trigger: GGGCTGCCCAGGAGCCCCCCAGAGATGTCTCTGCTG...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp ACCCTGCCGTGTTCCTTCATCTCCTTCTCAGAGTGGCTGTCTTTAGGAAAACAGGTTTTCCTCCTCCTCTaGGGTGCACGTCAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: TLPCSFISFSEWLSLGKQVFLLL*GARQVA
Trigger: AGCGACCTGACGTGCACCCCAGAGGAGGAGGAAAAC...CTGTTTTCCTAAAGACAGCCACTCTGAGAAGGAGATGAAGGAACACGGCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATCTCAGGGCCTCTGTCTaGCGCCACGTCCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDLRASV*RHVLLP
Trigger: GGGCAGCAGGACGTGGCGCCAGACAGAGGCCCTGAG...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTGTTTGTCCCCCTCAGGGATaGCGGTGGGAAACGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RTFGHRNWFLDFFNVVLVCPPQG*RWETGS
Trigger: CGAGCCCGTTTCCCACCGCCATCCCTGAGGGGGACA...AACAAGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TCTGGCCCAGGAGTATGGCTGTGTGTTTATCCTCTTTGTTTTGCCTGGTTCCTTAGACTGAGCGCGCGATaGGAGCCGCCTCATCTTACT +
Preference number: 4 (lower is better)
Translates to: SGPGVWLCVYPLCFAWFLRLSAR*EPPHLT
Trigger: AGTAAGATGAGGCGGCTCTCATCGCGCGCTCAGTCT...AAGGAACCAGGCAAAACAAAGAGGATAAACACACAGCCATACTCCTGGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp CGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTGTTCTCAGGGATTCAGACTaGGCGCGCGATGAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: RTFGHRNWFLDFFNVVLVLRDSD*ARDESR
Trigger: GCGGCTCTCATCGCGCGCTCAGTCTGAATCCCTGAG...AACAAGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTCCGGGCAGAGACGGTaGTGTCGCTCACGTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSSGQRR*CRSRGL
Trigger: CAGACCACGTGAGCGACAGCACCGTCTCTGCCCGGA...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAGCTCCAGGCCCTGTTaGTGCAGGCGGCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFSSRPC*CRRQTL
Trigger: AAGAGTCTGCCGCCTGCAGCAACAGGGCCTGGAGCT...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTCATGTCAAGCTCGCTaGGACAGGAGCGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSSCQAR*DRSVAR
Trigger: CCGGGCCACGCTCCTGTCCCAGCGAGCTTGACATGA...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCTCACACACATTTTCTTaGGAAAACACCCGCACAGGC +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFSHTFS*ENTRTG
Trigger: GCCTGTGCGGGTGTTTTCCCAAGAAAATGTGTGTGA...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTGTGCTGTCGCTCACGTaGTCTGGAGACACGACAGAG +
Preference number: 4 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRVLSLT*SGDTTE
Trigger: CTCTGTCGTGTCTCCAGACCACGTGAGCGACAGCAC...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTATCTTACTCGACCGCTaGTTGCGGGGCTTGACCTGG +
Preference number: 4 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRILLDR*LRGLTW
Trigger: CCAGGTCAAGCCCCGCAACCAGCGGTCGAGTAAGAT...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAACCAGGTTTCGCGTGCTaGGGCTCGGGGAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKPGFAC*GSGRPW
Trigger: CCAGGGTCTCCCCGAGCCCCAGCACGCGAAACCTGG...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATTCCTGGGCTCCTTCCTaGGTTCCCGCTCTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNSWAPS*VPALPG
Trigger: GCCCGGGAGAGCGGGAACCCAGGAAGGAGCCCAGGA...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCAGACGGTGATCCAGGGTaGCGCAGGCTGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWADGDPG*RRLPIS
Trigger: GCTGATGGGCAGCCTGCGCCACCCTGGATCACCGTC...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp GAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAACGCCATCCCTGTATTTaGGCGAGAGGGAGGTGGACC +
Preference number: 4 (lower is better)
Translates to: EKTHSYLWAQELVPGLFQRHPCI*ARGRWT
Trigger: GGTCCACCTCCCTCTCGCTCAAATACAGGGATGGCG...TTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAAGCTGGTGCGGGAGCGTaGAGCTCTGCAGAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKAGAGA*SSAEAA
Trigger: AGCCGCTTCTGCAGAGCTTCACGCTCCCGCACCAGC...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCATCCCTGTTTTGCCATaGATGTCATGCCTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFIPVLP*MSCLVV
Trigger: TACTACGAGGCATGACATTCATGGCAAAACAGGGAT...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATCTTCCTTCGGGACACTaGGTTCTGGCCCGTCGCGAG +
Preference number: 4 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDLPSGH*VLARRE
Trigger: CTCGCGACGGGCCAGAACGCAGTGTCCCGAAGGAAG...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TGTTTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAAGGGAGCGTGAAGCTCTaGAGAAGCGGCTTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CFAWFLPLPQVRHNLMIKGSVKL*RSGFRG
Trigger: GCCCCGGAAGCCGCTTCTGCAGAGCTTCACGCTCCC...TTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCACTGCGGCCGAAGAGCTaGACGCGGGCGCTGACACTA +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSLRPKS*TRALTL
Trigger: TAGTGTCAGCGCCCGCGTCCAGCTCTTCGGCCGCAG...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCGGAGTCGTAGCCCACTaGCCCGGATTCGATGGCAAT +
Preference number: 4 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFGVVAH*PGFDGN
Trigger: ATTGCCATCGAATCCGGGCCAGTGGGCTACGACTCC...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp ACCCTGCCGTGTTCCTTCATCTCCTTCTCAGAGTGGCTGTCTTTAGGAAAACAGCCCTGGAGGAGGTGGTaGCCCCATTTTCACATTACA +
Preference number: 4 (lower is better)
Translates to: TLPCSFISFSEWLSLGKQPWRRW*PHFHIT
Trigger: TGTAATGTGAAAATGGGGCCACCACCTCCTCCAGGG...CTGTTTTCCTAAAGACAGCCACTCTGAGAAGGAGATGAAGGAACACGGCAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGGCCCAGGAGTATGGCTGTGTGTTTATCCTCTTTGTTTTGCCTGGTTCCTTCTCTCTCGGGCACCTTaGCTTGCTTTCCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: SGPGVWLCVYPLCFAWFLLSRAP*LAFLVQ
Trigger: CTGAACCAGGAAAGCAAGCCAAGGTGCCCGAGAGAG...AAGGAACCAGGCAAAACAAAGAGGATAAACACACAGCCATACTCCTGGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGGCCCAGGAGTATGGCTGTGTGTTTATCCTCTTTGTTTTGCCTGGTTCCTTGAGCGACCAGAGACATaGGCTGATCTCAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGPGVWLCVYPLCFAWFLERPET*ADLSWK
Trigger: CTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTC...AAGGAACCAGGCAAAACAAAGAGGATAAACACACAGCCATACTCCTGGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCAGTCCCCCTCCGCTTCTaGCGAGTGACGGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSVPLRF*RVTVIQ
Trigger: CTGGATCACCGTCACTCGGCAGAAGCGGAGGGGGAC...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCTTCTCTTCTGGCCTTTaGTGGGTGTCCTATTTATGT +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFFSSGL*WVSYLC
Trigger: ACATAAATAGGACACCCAGCAAAGGCCAGAAGAGAA...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TGCCTCGTAGTAAACATGAAAGAAGACAGGATCCACAGGCAAGAGAGCGACCAGAGGTGCTACTTCCTGTaGACGACGGCGATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CLVVNMKEDRIHRQESDQRCYFL*TTAILF
Trigger: GAAAAGAATCGCCGTCGTCCACAGGAAGTAGCACCT...CTGGTCGCTCTCTTGCCTGTGGATCCTGTCTTCTTTCATGTTTACTACGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTGCTGGGGCGCTCTTCTaGGCTGACTTCCAAAAGTGG +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSAGALF*ADFQKW
Trigger: CCACTTTTGGAAGTCAGCCCAGAAGAGCGCCCCAGC...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCATGCTTCACAGGCTCCTaGCCTCTCTCGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWACFTGS*PLSGTL
Trigger: CAAGGTGCCCGAGAGAGGCCAGGAGCCTGTGAAGCA...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTATGAAAATACTGTCGTaGGAAAGGGCCCGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSMKILS*ERARLP
Trigger: GGGCAGCCGGGCCCTTTCTCACGACAGTATTTTCAT...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTGTTCTGATGGGACAATaGGATTCCTCTTTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRVLMGQ*DSSLQP
Trigger: GGGCTGCAAAGAGGAATCTCATTGTCCCATCAGAAC...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTACCAGAGACATGGGCTaGTCTCAGCTGGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSTRDMG*SQLEAQ
Trigger: CTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGT...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp CGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTGTTCTCCCCAAGGCCTTCTaGAGCCTCCCGAAGCTTAAT +
Preference number: 4 (lower is better)
Translates to: RTFGHRNWFLDFFNVVLVLPKAF*SLPKLN
Trigger: ATTAAGCTTCGGGAGGCTGCAGAAGGCCTTGGGGAG...AACAAGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp GAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAACTTGAAGTTGAGCTTTaGCCCCTGCTTCCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: EKTHSYLWAQELVPGLFQLEVEL*PLLPVH
Trigger: GTGGACCGGAAGCAGGGGGCAAAGCTCAACTTCAAG...TTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp GAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATTGCGGGGCTTGACCTaGAGCTTGTGCTTAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EKTHSYLWAQELVPGLFQLRGLT*SLCLAA
Trigger: TGCAGCTAAGCACAAGCTCCAGGTCAAGCCCCGCAA...TTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCAGCTTGTCTTCCTGGTTaGGTGGCTGGTCCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWAACLPG*VAGPRS
Trigger: GGACCTTGGACCAGCCACCCAACCAGGAAGACAAGC...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TGCCTCGTAGTAAACATGAAAGAAGACAGGATCCACAGGCAAGAGAGCGACCAGACACATTCGTACCTTTaGGCACAGGAACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: CLVVNMKEDRIHRQESDQTHSYL*AQELVP
Trigger: AGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGT...CTGGTCGCTCTCTTGCCTGTGGATCCTGTCTTCTTTCATGTTTACTACGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAAACACCCTTCACCTCCTaGGAGGCGCCATCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKTPFTS*EAPSLY
Trigger: ATACAGGGATGGCGCCTCTCAGGAGGTGAAGGGTGT...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp CGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTGTTGAGCTTGTGCTTAGCTaGAGAGTTGTCCAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: RTFGHRNWFLDFFNVVLVELVLS*RVVQAG
Trigger: TCCTGCCTGGACAACTCTGCAGCTAAGCACAAGCTC...AACAAGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAAAGACTTCAGGGTCCGTaGCCCAGGCTTGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKRLQGP*PRLVFL
Trigger: CAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCT...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTCAGAGACCTTTATGGTaGTACCAGGACCCACGTCGT +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSQRPLW*YQDPRR
Trigger: ACGACGTGGGTCCTGGTACCACCATAAAGGTCTCTG...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTCGACAGAGACCTTTATaGTGGTACCAGGACCCACGT +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSRQRPL*WYQDPR
Trigger: ACGTGGGTCCTGGTACCACCATAAAGGTCTCTGTCG...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAACCAGGCTTGTCTTCCTaGTTGGGTGGCTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKPGLSS*LGGWSK
Trigger: CTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGG...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCTTTGCCACAATACACTaGCAGTTTTTAACTAAGTGG +
Preference number: 4 (lower is better)
Translates to: RERPETWADLSWKHRCPFFATIH*QFLTKW
Trigger: CCACTTAGTTAAAAACTGCCAGTGTATTGTGGCAAA...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGGCGCTCTTCTGGGCTaGCTTCCAAAAGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNGALLG*LPKVAS
Trigger: AGAAGCCACTTTTGGAAGTCAGCCCAGAAGAGCGCC...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TCTGGCCCAGGAGTATGGCTGTGTGTTTATCCTCTTTGTTTTGCCTGGTTCCTTAATGAGATTCCTCTTTaGAGCCCCTCCTTGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SGPGVWLCVYPLCFAWFLNEIPL*SPSLKL
Trigger: CAACTTCAAGGAGGGGCTGCAAAGAGGAATCTCATT...AAGGAACCAGGCAAAACAAAGAGGATAAACACACAGCCATACTCCTGGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCTGTCCATCACCCTTGTaGAAATCATGTCAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFCPSPL*KSCQAR
Trigger: GCGAGCTTGACATGATTTCCACAAGGGTGATGGACA...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCACTTGGCTTGCTTTCCTaGTTCAGACTTCAGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWALGLLS*FRLQGP
Trigger: CGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAG...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATGAAGGGCTTCTCTTCTaGCCTTTGCTGGGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDEGLLF*PLLGVL
Trigger: TAGGACACCCAGCAAAGGCCAGAAGAGAAGCCCTTC...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TGTTTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAACGGATTCGATGGCAATaGCCTCATTCCTCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: CFAWFLPLPQVRHNLMIKRIRWQ*PHSSSD
Trigger: GTCAGACGAGGAATGAGGTCATTGCCATCGAATCCG...TTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCAGCAGGAGGAGGATTCTaGAGGATAACTGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWAAGGGF*RITEVS
Trigger: GCTGACTTCAGTTATCCTGCAGAATCCTCCTCCTGC...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATTCGGGCACCTTGGCTTaGTTTCCTGGTTCAGACTTC +
Preference number: 4 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNSGTLA*FPGSDF
Trigger: GAAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGA...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAAGTTCCATCCAGGATaGCTGATCTGTACTGGCATA +
Preference number: 4 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFKFHPG*LICTGI
Trigger: TATGCCAGTACAGATCAGCCATCCTGGATGGAACTT...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCATGTTGTTCTTGTTTCTaGGCCCTCTGGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSCCSCF*ALWPRS
Trigger: ACTCCTGGGCCAGAGGGCCCAGAAACAAGAACAACA...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCATGGGCTGATCTCAGCTaGAAGCACAGATGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSWADLS*KHRCPF
Trigger: GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCA...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TGTCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGACCTCATTCCTCGTCTaGCTTTGTTTCCAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: CLRLLYQGNSKRHIRTFGTSFLV*LCFQVL
Trigger: TAGCACCTGGAAACAAAGTCAGACGAGGAATGAGGT...CCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTGTCCGGACTCAGGAATaGAAATACTGTCGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSVRTQE*KYCREK
Trigger: TTTCTCACGACAGTATTTTCATTCCTGAGTCCGGAC...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TTAAACAGGCAATGCATTGTGCAGTGGTTAAAGACACAGATGCCTAGTGGAAAAATTCTGCAGGATAACTaGAGTCAGCCACTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LNRQCIVQWLKTQMPSGKILQDN*SQPLVP
Trigger: TGGCACCAGTGGCTGACTTCAGTTATCCTGCAGAAT...TTTTCCACTAGGCATCTGTGTCTTTAACCACTGCACAATGCATTGCCTGTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCTTTGGAAACAGTCTATaGATTGATGAACCCTGCCGT +
Preference number: 4 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFFGNSL*IDEPCR
Trigger: ACGGCAGGGTTCATCAATTCATAGACTGTTTCCAAA...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGACTTTGTTTCCAGGTaGTACTTCCTGTGGACGACG +
Preference number: 4 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNDFVSR*YFLWTT
Trigger: CGTCGTCCACAGGAAGTAGCACCTGGAAACAAAGTC...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCATTGACCTGGAGCTTGTaGTTAGCTGCAGAGTTGTCC +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSLTWSL*LAAELS
Trigger: GGACAACTCTGCAGCTAAGCACAAGCTCCAGGTCAA...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCACTTCTCCATCATCACTaGAGACTGAGCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWALLHHH*RLSQVL
Trigger: CAGAACTTGGCTCAGTCTGCAGTGATGATGGAGAAG...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TGCCTCGTAGTAAACATGAAAGAAGACAGGATCCACAGGCAAGAGAGCGACCAGCACTGTATTTTTAACTaGAGAGCTTTAATCCGATCA +
Preference number: 4 (lower is better)
Translates to: CLVVNMKEDRIHRQESDQHCIFN*RALIRS
Trigger: TGATCGGATTAAAGCTCTGCAGTTAAAAATACAGTG...CTGGTCGCTCTCTTGCCTGTGGATCCTGTCTTCTTTCATGTTTACTACGAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATCTGTACTGGCATAACTaGCTCTCTTCAGCTGATGCA +
Preference number: 4 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNLYWHN*LSSADA
Trigger: TGCATCAGCTGAAGAGAGCCAGTTATGCCAGTACAG...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp GAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATTTGGGCACAGGAACTaGTTCCTGGACTTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: EKTHSYLWAQELVPGLFQFGHRN*FLDFFN
Trigger: ATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAA...TTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR TCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCAATGTCACTCCAAGCTTaGGATTTCTTTCTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWAMSLQA*DFFLAS
Trigger: ACTTGCCAGAAAGAAATCTCAAGCTTGGAGTGACAT...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCATCAGGAAAGACTTGCTaGGAACAAAGTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSSGKTC*EQSQLA
Trigger: AGCAAGCTGACTTTGTTCGCAGCAAGTCTTTCCTGA...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCAATGGCTGATCTGTACTaGCATAACTGGCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSMADLY*HNWLSS
Trigger: TGAAGAGAGCCAGTTATGCCAGTACAGATCAGCCAT...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATCAGTTTTTAACTAAGTaGCTTGTCAGGGTAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDQFLTK*LVRVVD
Trigger: GTCCACTACCCTGACAAGCCACTTAGTTAAAAACTG...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATTCTTCTGGCCTTTGCTaGGTGTCCTATTTATGTGTC +
Preference number: 4 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNSSGLC*VSYLCV
Trigger: GACACATAAATAGGACACCCAGCAAAGGCCAGAAGA...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
3UTR CAA 72 bp TTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTaGGGCACAGGAACTGGTTCCTGGACTTTTTCAATG +
Preference number: 4 (lower is better)
Translates to: FIKGIRKDTFVP*GTGTGSWTFSM
Trigger: CATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TGTTTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAAAGATTGTTTTATAGCTaGTCTTGGAAACGGCATCCC +
Preference number: 4 (lower is better)
Translates to: CFAWFLPLPQVRHNLMIKRLFYS*SWKRHP
Trigger: GGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCT...TTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATACAGGAACTGGTTCCTaGACTTTTTCAATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDTGTGS*TFSMLF
Trigger: GAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGT...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CCA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATCAATGCATTGTGCAGTaGTTAAAGACACAGATGCCT +
Preference number: 4 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNQCIVQ*LKTQMP
Trigger: AGGCATCTGTGTCTTTAACCACTGCACAATGCATTG...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCAGTTTCACAGTTTGTTTaGCACAATACACTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSVSQFV*HNTLAV
Trigger: AACTGCCAGTGTATTGTGGCAAACAAACTGTGAAAC...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR GCA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCATTATTAAACAGGCAATaGATTGTGCAGTGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: SEASLSREFEKTHSYLWALLNRQ*IVQWLK
Trigger: CTTTAACCACTGCACAATGCATTGCCTGTTTAATAA...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 90 bp GCCCGGGCTCGGCGAGACGCGCAGAGAAGGGCACCTTCCGCGGGGTaGGGCGAGCCGGGGCTGCTCCCGCCGCGGTGCGCGTCTAGCCCC +
Preference number: 5 (lower is better)
Translates to: ARARRDAQRRAPSAG*GEPGLLPPRCASSP
Trigger: GGGGCTAGACGCGCACCGCGGCGGGAGCAGCCCCGGCTCGCCGCACCCCGCGGAAGGTGCCCTTCTCTGCGCGTCTCGCCGAGCCCGGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397899.7
ENST00000420294.1
ENST00000428096.5
ENST00000462314.1
CDS CCA 90 bp GTGGCCGCGCGGCCTCCAGACAGCCCGGGTCTGCGGCCGAAGAGCTaGACGCGGGCGCTGACACTACCCTCCCGCGGCCGGCCCGGCCCT +
Preference number: 5 (lower is better)
Translates to: VAARPPDSPGLRPKS*TRALTLPSRGRPGP
Trigger: AGGGCCGGGCCGGCCGCGGGAGGGTAGTGTCAGCGCCCGCGTCCAGCTCTTCGGCCGCAGACCCGGGCTGTCTGGAGGCCGCGCGGCCAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397899.7
ENST00000420294.1
ENST00000428096.5
ENST00000462314.1
CDS CCA 90 bp GGAGGAGTGCTGCAGGCGGGCGCGTCTGGCACGGGCCCCTCCGGGTaGCGGCAAGGGCGCCGGTGGCCCAGGCTCAGGGCCTCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GGVLQAGASGTGPSG*RQGRRWPRLRASVW
Trigger: CCAGACAGAGGCCCTGAGCCTGGGCCACCGGCGCCCTTGCCGCCACCCGGAGGGGCCCGTGCCAGACGCGCCCGCCTGCAGCACTCCTCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp CGGTGCGCGTCTAGCCCCAGCCCAAAGCCGGGGCGACGCAGCAGGTaGCCGCGCGGCCTCCAGACAGCCCGGGTCTGCGGCCGAAGAGCT +
Preference number: 5 (lower is better)
Translates to: RCASSPSPKPGRRSR*PRGLQTARVCGRRA
Trigger: AGCTCTTCGGCCGCAGACCCGGGCTGTCTGGAGGCCGCGCGGCCACCTGCTGCGTCGCCCCGGCTTTGGGCTGGGGCTAGACGCGCACCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397899.7
ENST00000420294.1
ENST00000428096.5
ENST00000462314.1
CDS GCA 90 bp CATCCGGGAGCACGGGCGGCGTCGGCTCCGCTTCCTTCGGGACACTaGGTTCTGGCCCGTCGCGAGCAGAGGGCGCCTCTGAGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: HPGARAASAPLPSGH*VLARREQRAPLRWR
Trigger: CCGCCACCTCAGAGGCGCCCTCTGCTCGCGACGGGCCAGAACGCAGTGTCCCGAAGGAAGCGGAGCCGACGCCGCCCGTGCTCCCGGATG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp AGCTTCCGAGGGCCAGGTTTCGCGTGCTGGGGCTCGGGGAGACCCTaGAGGTCGTCAAGAGCCGCCTCGCTCCTCCAGACCGGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: SFRGPGFACWGSGRP*RSSRAASLLQTGPL
Trigger: GAGCGGCCCGGTCTGGAGGAGCGAGGCGGCTCTTGACGACCTCCAGGGTCTCCCCGAGCCCCAGCACGCGAAACCTGGCCCTCGGAAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 90 bp GCCGGTGGCCCAGGCTCAGGGCCTCTGTCTGGCGCCACGTCCTGCTaGCCAGAGCTGGGGCGCTCTTCTGGGCTGACTTCCAAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: AGGPGSGPLSGATSC*PELGRSSGLTSKSG
Trigger: GCCACTTTTGGAAGTCAGCCCAGAAGAGCGCCCCAGCTCTGGGCAGCAGGACGTGGCGCCAGACAGAGGCCCTGAGCCTGGGCCACCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 90 bp GGCGCCGGTGGCCCAGGCTCAGGGCCTCTGTCTGGCGCCACGTCCTaGTGCCCAGAGCTGGGGCGCTCTTCTGGGCTGACTTCCAAAAGT +
Preference number: 5 (lower is better)
Translates to: GAGGPGSGPLSGATS*CPELGRSSGLTSKS
Trigger: ACTTTTGGAAGTCAGCCCAGAAGAGCGCCCCAGCTCTGGGCAGCAGGACGTGGCGCCAGACAGAGGCCCTGAGCCTGGGCCACCGGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 90 bp TTGTCTTCCTGGTTGGGTGGCTGGTCCAAGGTCCCCCTCCGCTTCTaGCGAGTGACGGTGATCCAGGGTGGCGCAGGCTGCCCATCAGCT +
Preference number: 5 (lower is better)
Translates to: LSSWLGGWSKVPLRF*RVTVIQGGAGCPSA
Trigger: AGCTGATGGGCAGCCTGCGCCACCCTGGATCACCGTCACTCGGCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp GACTTCAGGGTCCGTGCCCCAGGCTTGTCTTCCTGGTTGGGTGGCTaGTCCAAGGTCCCCCTCCGCTTCTGCCGAGTGACGGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: DFRVRAPGLSSWLGG*SKVPLRFCRVTVIQ
Trigger: CTGGATCACCGTCACTCGGCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 90 bp CTCGGGCACCTTGGCTTGCTTTCCTGGTTCAGACTTCAGGGTCCGTaGCCCAGGCTTGTCTTCCTGGTTGGGTGGCTGGTCCAAGGTCCC +
Preference number: 5 (lower is better)
Translates to: LGHLGLLSWFRLQGP*PRLVFLVGWLVQGP
Trigger: GGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp TTCAGACTTCAGGGTCCGTGCCCCAGGCTTGTCTTCCTGGTTGGGTaGCTGGTCCAAGGTCCCCCTCCGCTTCTGCCGAGTGACGGTGAT +
Preference number: 5 (lower is better)
Translates to: FRLQGPCPRLVFLVG*LVQGPPPLLPSDGD
Trigger: ATCACCGTCACTCGGCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp TTTCCTGGTTCAGACTTCAGGGTCCGTGCCCCAGGCTTGTCTTCCTaGTTGGGTGGCTGGTCCAAGGTCCCCCTCCGCTTCTGCCGAGTG +
Preference number: 5 (lower is better)
Translates to: FPGSDFRVRAPGLSS*LGGWSKVPLRFCRV
Trigger: CACTCGGCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS TCA 90 bp CACCCACTTGGCATCAGTCAATGGCCAGGGGTCCGTCCTTGGGCCTaGCGGTGGAATCCGGGGGTGGATCTGAGACCTCTATCCGCTTTC +
Preference number: 5 (lower is better)
Translates to: HPLGISQWPGVRPWA*RWNPGVDLRPLSAF
Trigger: GAAAGCGGATAGAGGTCTCAGATCCACCCCCGGATTCCACCGTCAGGCCCAAGGACGGACCCCTGGCCATTGACTGATGCCAAGTGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420294.1
CDS GCA 90 bp CAGCCACTGGTGCCAGGCTGTTGTCTGAGATCCGGGCAGAGACGGTaGTGTCGCTCACGTGGTCTGGAGACACGACAGAGACCTTTATGG +
Preference number: 5 (lower is better)
Translates to: QPLVPGCCLRSGQRR*CRSRGLETRQRPLW
Trigger: CCATAAAGGTCTCTGTCGTGTCTCCAGACCACGTGAGCGACAGCACCGTCTCTGCCCGGATCTCAGACAACAGCCTGGCACCAGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397899.7
ENST00000423771.5
ENST00000462314.1
CDS GCA 90 bp TCAGCTTGCTTCACAGGCTCCTGGCCTCTCTCGGGCACCTTGGCTTaGTTTCCTGGTTCAGACTTCAGGGTCCGTGCCCCAGGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: SACFTGSWPLSGTLA*FPGSDFRVRAPGLS
Trigger: AGACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGAGAGAGGCCAGGAGCCTGTGAAGCAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp CGTGCCCCTCGACTCCTCCAGCTCATCCTCGGAGTCGTAGCCCACTaGCCCGGATTCGATGGCAATGACCTCATTCCTCGTCTGACTTTG +
Preference number: 5 (lower is better)
Translates to: RAPRLLQLILGVVAH*PGFDGNDLIPRLTL
Trigger: CAAAGTCAGACGAGGAATGAGGTCATTGCCATCGAATCCGGGCCAGTGGGCTACGACTCCGAGGATGAGCTGGAGGAGTCGAGGGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
CDS CCA 90 bp CTTCACAGGCTCCTGGCCTCTCTCGGGCACCTTGGCTTGCTTTCCTaGTTCAGACTTCAGGGTCCGTGCCCCAGGCTTGTCTTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: LHRLLASLGHLGLLS*FRLQGPCPRLVFLV
Trigger: AACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGAGAGAGGCCAGGAGCCTGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp GGGCCTCCCTTTCCTCTGAGTGGCCTAGGGCCCACGGGTCACCACTaGTTGCTGATCAAGAGCCCTTGTCCCCATCTCTCACAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: GPPFPLSGLGPTGHH*LLIKSPCPHLSQKY
Trigger: GTACTTCTGTGAGAGATGGGGACAAGGGCTCTTGATCAGCAACCAGTGGTGACCCGTGGGCCCTAGGCCACTCAGAGGAAAGGGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423771.5
CDS CCA 90 bp AGGCTGTTGTCTGAGATCCGGGCAGAGACGGTGCTGTCGCTCACGTaGTCTGGAGACACGACAGAGACCTTTATGGTGGTACCAGGACCC +
Preference number: 5 (lower is better)
Translates to: RLLSEIRAETVLSLT*SGDTTETFMVVPGP
Trigger: GGGTCCTGGTACCACCATAAAGGTCTCTGTCGTGTCTCCAGACCACGTGAGCGACAGCACCGTCTCTGCCCGGATCTCAGACAACAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397899.7
ENST00000423771.5
ENST00000462314.1
CDS CCA 90 bp TGGGCTGACTTCCAAAAGTGGCTTCTCCTCGTTTTCCTCCTCCTCTaGGGTGCACGTCAGGTCGCTCAGGGATTCAGACTGAGCGCGCGA +
Preference number: 5 (lower is better)
Translates to: WADFQKWLLLVFLLL*GARQVAQGFRLSAR
Trigger: TCGCGCGCTCAGTCTGAATCCCTGAGCGACCTGACGTGCACCCCAGAGGAGGAGGAAAACGAGGAGAAGCCACTTTTGGAAGTCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS TCA 90 bp TTCTGCAGGATAACTGAAGTCAGCCACTGGTGCCAGGCTGTTGTCTaGGATCCGGGCAGAGACGGTGCTGTCGCTCACGTGGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: FCRITEVSHWCQAVV*DPGRDGAVAHVVWR
Trigger: TCTCCAGACCACGTGAGCGACAGCACCGTCTCTGCCCGGATCTCAGACAACAGCCTGGCACCAGTGGCTGACTTCAGTTATCCTGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397899.7
ENST00000423771.5
ENST00000462314.1
CDS GCA 90 bp GCTTCCGGTCCACAGCGGGCTTCACAGGGGTTATCAGGAAAGACTTaGTGCGAACAAAGTCAGCTTGCTTCACAGGCTCCTGGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: ASGPQRASQGLSGKT*CEQSQLASQAPGLS
Trigger: AGAGAGGCCAGGAGCCTGTGAAGCAAGCTGACTTTGTTCGCAGCAAGTCTTTCCTGATAACCCCTGTGAAGCCCGCTGTGGACCGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCACCACCTCCTCCGCCTaGTCCGTGGCCGGGGCACAC +
Preference number: 5 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFTTSSA*SVAGAH
Trigger: GTGTGCCCCGGCCACGGACAAGGCGGAGGAGGTGGT...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS TCA 90 bp GCTCATCCTCGGAGTCGTAGCCCACTGGCCCGGATTCGATGGCAATaGCCTCATTCCTCGTCTGACTTTGTTTCCAGGTGCTACTTCCTG +
Preference number: 5 (lower is better)
Translates to: AHPRSRSPLARIRWQ*PHSSSDFVSRCYFL
Trigger: CAGGAAGTAGCACCTGGAAACAAAGTCAGACGAGGAATGAGGTCATTGCCATCGAATCCGGGCCAGTGGGCTACGACTCCGAGGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
ENST00000462314.1
CDS-3UTR CAA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTGTTTCAGGCAGCTCTaGGGCGCCGGCGGGCTCGGG +
Preference number: 5 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSCFRQL*GAGGLG
Trigger: CCCGAGCCCGCCGGCGCCCAAGAGCTGCCTGAAACA...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp GAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATTACTCGACCGCTGGTaGCGGGGCTTGACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: EKTHSYLWAQELVPGLFQLLDRW*RGLTWS
Trigger: GCTCCAGGTCAAGCCCCGCAACCAGCGGTCGAGTAA...TTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTAGCCCCTCCTTGAAGTaGAGCTTTGCCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRSPSLK*SFAPCF
Trigger: GAAGCAGGGGGCAAAGCTCAACTTCAAGGAGGGGCT...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 90 bp CACAGGTGTCCTTATCTCAGCATACCAGATTCATTACATGGAGTATaGAGAAAATCAGTGACTTCTGCTGGGACAGGAGCGTGGCCCGGG +
Preference number: 5 (lower is better)
Translates to: HRCPYLSIPDSLHGV*RKSVTSAGTGAWPG
Trigger: CCCGGGCCACGCTCCTGTCCCAGCAGAAGTCACTGATTTTCTGCATACTCCATGTAATGAATCTGGTATGCTGAGATAAGGACACCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428096.5
CDS-3UTR CAA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCAGAGGTGGACCGGAGCTaGACGGGGAAGGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SEASLSREFEKTHSYLWAEVDRS*TGKGFL
Trigger: CAGAAACCCCTTCCCCGTCAAGCTCCGGTCCACCTC...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTGCGCCATCCCTGTATTaGAGCGAGAGGGAGGTGGAC +
Preference number: 5 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSAPSLY*SEREVD
Trigger: GTCCACCTCCCTCTCGCTCAAATACAGGGATGGCGC...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp TTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAATCACAGCTCCAGGCCCTGTaGCTGCAGGCGGCAGACTCT +
Preference number: 5 (lower is better)
Translates to: FAWFLPLPQVRHNLMIKSQLQAL*LQAADS
Trigger: AGAGTCTGCCGCCTGCAGCAACAGGGCCTGGAGCTG...TGATTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp CGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTTGTTGGCTTGTCTTCCTGGTaGGGTGGCTGGTCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: RTFGHRNWFLDFFNVVLVGLSSW*GGWSKV
Trigger: GACCTTGGACCAGCCACCCAACCAGGAAGACAAGCC...AACAAGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp TGTTTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAAGTCCGTGCCCCAGGCTaGTCTTCCTGGTTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: CFAWFLPLPQVRHNLMIKVRAPG*SSWLGG
Trigger: GCCACCCAACCAGGAAGACAAGCCTGGGGCACGGAC...TTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp AGAGAGCGACCAGAGACATGGGCTGATCTCAGCTGGAAGCACAGATGTCCCTTCGTGTGTTTATCCTCTTaGTTTTGCCTGGTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: RERPETWADLSWKHRCPFVCLSS*FCLVPS
Trigger: GGAAGGAACCAGGCAAAACAAAGAGGATAAACACAC...GAAGGGACATCTGTGCTTCCAGCTGAGATCAGCCCATGTCTCTGGTCGCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp TACACTGTATTTTTAATCCAGCTCATCCTCGGAGTCGTAGCCCACTaGCCCGGATTCGATGGCAATGACCTCATTCCTCGTCTGACTTTG +
Preference number: 5 (lower is better)
Translates to: YTVFLIQLILGVVAH*PGFDGNDLIPRLTL
Trigger: CAAAGTCAGACGAGGAATGAGGTCATTGCCATCGAATCCGGGCCAGTGGGCTACGACTCCGAGGATGAGCTGGATTAAAAATACAGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462314.1
CDS-3UTR CAA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCAACTGGTGCCAGGCTGTaGTCTGAGATCCGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SEASLSREFEKTHSYLWATGARL*SEIRAE
Trigger: CTCTGCCCGGATCTCAGACAACAGCCTGGCACCAGT...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATCGCTGGTTGCGGGGCTaGACCTGGAGCTTGTGCTTA +
Preference number: 5 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNRWLRG*TWSLCL
Trigger: TAAGCACAAGCTCCAGGTCAAGCCCCGCAACCAGCG...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCACTTTGCAGCCCCTCCTaGAAGTTGAGCTTTGCCCCC +
Preference number: 5 (lower is better)
Translates to: SEASLSREFEKTHSYLWALCSPS*KLSFAP
Trigger: GGGGGCAAAGCTCAACTTCAAGGAGGGGCTGCAAAG...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp TCTGAGGCTTCTTTATCAAGGGAATTCGAAAAGACACATTCGTACCTTTGGGCATGCTTAGCTGCAGAGTaGTCCAGGCAGGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SEASLSREFEKTHSYLWACLAAE*SRQEED
Trigger: ATCCTCCTCCTGCCTGGACAACTCTGCAGCTAAGCA...TGCCCAAAGGTACGAATGTGTCTTTTCGAATTCCCTTGATAAAGAAGCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp TCTCAGTCACAGGTGTCCTTATCTCAGCATACCAGATTCATTACATaGAGTATGCAGAAAATCAGTGACTTGGCTGAGGCGTCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: SQSQVSLSQHTRFIT*SMQKISDLAEASRS
Trigger: GCTTCTGGACGCCTCAGCCAAGTCACTGATTTTCTGCATACTCCATGTAATGAATCTGGTATGCTGAGATAAGGACACCTGTGACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420294.1
CDS CCA 90 bp TCTCAGTCACAGGTGTCCTTATCTCAGCATACCAGATTCATTACATaGAGTATGCAGAAAATCAGTGACTTCTGCTGGGACAGGAGCGTG +
Preference number: 5 (lower is better)
Translates to: SQSQVSLSQHTRFIT*SMQKISDFCWDRSV
Trigger: CACGCTCCTGTCCCAGCAGAAGTCACTGATTTTCTGCATACTCCATGTAATGAATCTGGTATGCTGAGATAAGGACACCTGTGACTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428096.5
CDS-3UTR CAA 90 bp TGTTTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAAGGCTTGACCTGGAGCTaGTGCTTAGCTGCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: CFAWFLPLPQVRHNLMIKGLTWS*CLAAEL
Trigger: CAACTCTGCAGCTAAGCACAAGCTCCAGGTCAAGCC...TTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATCTCGGGCACCTTGGCTaGCTTTCCTGGTTCAGACTT +
Preference number: 5 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNLGHLG*LSWFRL
Trigger: AAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGAG...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp TATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTCATGCCTCGTGAAACAGTCTATGAATaGATGAACCCTGCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: YSCSWKRHPCFAMNVMPRETVYE*MNPAVF
Trigger: GAACACGGCAGGGTTCATCAATTCATAGACTGTTTC...ACGAGGCATGACATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 90 bp TCTCAGTCACAGGTGTCCTTATCTCAGCATACCAGATTCATTACATaGAGTATGCAGAAAATCAGTGACTTCTGGCAAATGCCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: SQSQVSLSQHTRFIT*SMQKISDFWQMPAL
Trigger: CAGGGCAGGCATTTGCCAGAAGTCACTGATTTTCTGCATACTCCATGTAATGAATCTGGTATGCTGAGATAAGGACACCTGTGACTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415261.5
CDS-3UTR CAA 90 bp TGTTTTGCCTGGTTCCTTCCTCTTCCCCAAGTTCGTCATAACTTGATGATAAAAGACACATTCGTACCTTaGGGCACAGGAACTGGTTCC +
Preference number: 5 (lower is better)
Translates to: CFAWFLPLPQVRHNLMIKDTFVP*GTGTGS
Trigger: GGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTC...TTTTATCATCAAGTTATGACGAACTTGGGGAAGAGGAAGGAACCAGGCAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp GAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAACTTCTCTTCTGGCCTTaGCTGGGTGTCCTATTTATG +
Preference number: 5 (lower is better)
Translates to: EKTHSYLWAQELVPGLFQLLFWP*LGVLFM
Trigger: CATAAATAGGACACCCAGCAAAGGCCAGAAGAGAAG...TTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp CCCTGTTTTGCCATGAATGTCATGCCTCGTAGTAAACATGAAAGAAGACAGGATATTCCTCGTCTGACTTaGTTTCCAGGTGCTACTTCC +
Preference number: 5 (lower is better)
Translates to: PCFAMNVMPRSKHERRQDIPRLT*FPGATS
Trigger: GGAAGTAGCACCTGGAAACAAAGTCAGACGAGGAAT...ATCCTGTCTTCTTTCATGTTTACTACGAGGCATGACATTCATGGCAAAACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp CATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGTTGTTCTAGTTTCACAGTTTGTTaGCCACAATACACTGGCAGT +
Preference number: 5 (lower is better)
Translates to: HSYLWAQELVPGLFQCCSSFTVC*PQYTGS
Trigger: ACTGCCAGTGTATTGTGGCAAACAAACTGTGAAACT...AGAACAACATTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp GAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCAATGGACTTTTTCAATGTaGTTCTTGTTTCTGGGCCCT +
Preference number: 5 (lower is better)
Translates to: EKTHSYLWAQELVPGLFQWTFSM*FLFLGP
Trigger: AGGGCCCAGAAACAAGAACAACATTGAAAAAGTCCA...TTGAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp AACAGATTGTTTTATAGCTGCTCTTGGAAACGGCATCCCTGTTTTGCCATGAATGTTATCAGGAAAGACTaGCTGCGAACAAAGTCAGCT +
Preference number: 5 (lower is better)
Translates to: NRLFYSCSWKRHPCFAMNVIRKD*LRTKSA
Trigger: AGCTGACTTTGTTCGCAGCAAGTCTTTCCTGATAAC...ATTCATGGCAAAACAGGGATGCCGTTTCCAAGAGCAGCTATAAAACAATCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS-3UTR CAA 90 bp TCGAAAAGACACATTCGTACCTTTGGGCACAGGAACTGGTTCCTGGACTTTTTCTTTAAGTTTCACAGTTaGTTTGCCACAATACACTGG +
Preference number: 5 (lower is better)
Translates to: SKRHIRTFGHRNWFLDFFFKFHS*FATIHW
Trigger: CCAGTGTATTGTGGCAAACAAACTGTGAAACTTAAA...GAAAAAGTCCAGGAACCAGTTCCTGTGCCCAAAGGTACGAATGTGTCTTTTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp CGGCCTCCAGACAGCCCGGGTCTGCGGCCGAAGAGCTaGACGCGGGCGCTGACACTACCCTCCCGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: RPPDSPGLRPKS*TRALTLPSRGR
Trigger: CCGGCCGCGGGAGGGTAGTGTCAGCGCCCGCGTCCAGCTCTTCGGCCGCAGACCCGGGCTGTCTGGAGGCCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397899.7
ENST00000420294.1
ENST00000428096.5
ENST00000462314.1
CDS GCA 72 bp GCACGGGCGGCGTCGGCTCCGCTTCCTTCGGGACACTaGGTTCTGGCCCGTCGCGAGCAGAGGGCGCCTCTG +
Preference number: 6 (lower is better)
Translates to: ARAASAPLPSGH*VLARREQRAPL
Trigger: CAGAGGCGCCCTCTGCTCGCGACGGGCCAGAACGCAGTGTCCCGAAGGAAGCGGAGCCGACGCCGCCCGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 72 bp GGCCCAGGCTCAGGGCCTCTGTCTGGCGCCACGTCCTaGTGCCCAGAGCTGGGGCGCTCTTCTGGGCTGACT +
Preference number: 6 (lower is better)
Translates to: GPGSGPLSGATS*CPELGRSSGLT
Trigger: AGTCAGCCCAGAAGAGCGCCCCAGCTCTGGGCAGCAGGACGTGGCGCCAGACAGAGGCCCTGAGCCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 72 bp CCGCGCTCCGCCAGCTTCCGAGGGCCAGGTTTCGCGTaGTGGGGCTCGGGGAGACCCTGGAGGTCGTCAAGA +
Preference number: 6 (lower is better)
Translates to: PRSASFRGPGFA*WGSGRPWRSSR
Trigger: TCTTGACGACCTCCAGGGTCTCCCCGAGCCCCAGCACGCGAAACCTGGCCCTCGGAAGCTGGCGGAGCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp GGGCCAGGTTTCGCGTGCTGGGGCTCGGGGAGACCCTaGAGGTCGTCAAGAGCCGCCTCGCTCCTCCAGACC +
Preference number: 6 (lower is better)
Translates to: GPGFACWGSGRP*RSSRAASLLQT
Trigger: GGTCTGGAGGAGCGAGGCGGCTCTTGACGACCTCCAGGGTCTCCCCGAGCCCCAGCACGCGAAACCTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp CGCTCCGCCAGCTTCCGAGGGCCAGGTTTCGCGTGCTaGGGCTCGGGGAGACCCTGGAGGTCGTCAAGAGCC +
Preference number: 6 (lower is better)
Translates to: RSASFRGPGFAC*GSGRPWRSSRA
Trigger: GGCTCTTGACGACCTCCAGGGTCTCCCCGAGCCCCAGCACGCGAAACCTGGCCCTCGGAAGCTGGCGGAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 72 bp CCAGGCTCAGGGCCTCTGTCTGGCGCCACGTCCTGCTaGCCAGAGCTGGGGCGCTCTTCTGGGCTGACTTCC +
Preference number: 6 (lower is better)
Translates to: PGSGPLSGATSC*PELGRSSGLTS
Trigger: GGAAGTCAGCCCAGAAGAGCGCCCCAGCTCTGGGCAGCAGGACGTGGCGCCAGACAGAGGCCCTGAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 72 bp GGGTGGCGCAGGCTGCCCATCAGCTCCAGGCCCTGTTaGTGCAGGCGGCAGACTCTTTTCAGCTCCCCTGCG +
Preference number: 6 (lower is better)
Translates to: GWRRLPISSRPC*CRRQTLFSSPA
Trigger: CGCAGGGGAGCTGAAAAGAGTCTGCCGCCTGCAGCAACAGGGCCTGGAGCTGATGGGCAGCCTGCGCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 72 bp TGGTTGGGTGGCTGGTCCAAGGTCCCCCTCCGCTTCTaGCGAGTGACGGTGATCCAGGGTGGCGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: WLGGWSKVPLRF*RVTVIQGGAGC
Trigger: GCAGCCTGCGCCACCCTGGATCACCGTCACTCGGCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp GTCCGTGCCCCAGGCTTGTCTTCCTGGTTGGGTGGCTaGTCCAAGGTCCCCCTCCGCTTCTGCCGAGTGACG +
Preference number: 6 (lower is better)
Translates to: VRAPGLSSWLGG*SKVPLRFCRVT
Trigger: CGTCACTCGGCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp ACTTCAGGGTCCGTGCCCCAGGCTTGTCTTCCTGGTTaGGTGGCTGGTCCAAGGTCCCCCTCCGCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: TSGSVPQACLPG*VAGPRSPSASA
Trigger: GGCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp CATCTCTCACAGAAGTACCCGTGCGCCAGGAGGAAGTaGGGCTTCTGCCAAGCCCAGCCCTCCTGTGCCCCG +
Preference number: 6 (lower is better)
Translates to: HLSQKYPCARRK*GFCQAQPSCAP
Trigger: CGGGGCACAGGAGGGCTGGGCTTGGCAGAAGCCCCACTTCCTCCTGGCGCACGGGTACTTCTGTGAGAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423771.5
CDS CAA 72 bp GACTTCAGGGTCCGTGCCCCAGGCTTGTCTTCCTGGTaGGGTGGCTGGTCCAAGGTCCCCCTCCGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: DFRVRAPGLSSW*GGWSKVPLRFC
Trigger: GCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 90 bp CCTGGTTCAGACTTCAGGGTCCGTGCCCCAGGCTTGTCTTCCTGGTaGGGTGGCTGGTCCAAGGTCCCCCTCCGCTTCTGCCGAGTGACG +
Preference number: 6 (lower is better)
Translates to: PGSDFRVRAPGLSSW*GGWSKVPLRFCRVT
Trigger: CGTCACTCGGCAGAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp TCAGACTTCAGGGTCCGTGCCCCAGGCTTGTCTTCCTaGTTGGGTGGCTGGTCCAAGGTCCCCCTCCGCTTC +
Preference number: 6 (lower is better)
Translates to: SDFRVRAPGLSS*LGGWSKVPLRF
Trigger: GAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 72 bp CCCACTTGGCATCAGTCAATGGCCAGGGGTCCGTCCTaGGGCCTGACGGTGGAATCCGGGGGTGGATCTGAG +
Preference number: 6 (lower is better)
Translates to: PTWHQSMARGPS*GLTVESGGGSE
Trigger: CTCAGATCCACCCCCGGATTCCACCGTCAGGCCCAAGGACGGACCCCTGGCCATTGACTGATGCCAAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420294.1
CDS CAA 72 bp CAGGGATGGGAAGGAAGGCTGCTGCCAGGCACCCACTaGGCATCAGTCAATGGCCAGGGGTCCGTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: QGWEGRLLPGTH*ASVNGQGSVLG
Trigger: CCCAAGGACGGACCCCTGGCCATTGACTGATGCCAAGTGGGTGCCTGGCAGCAGCCTTCCTTCCCATCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420294.1
CDS TCA 72 bp GGCATCAGTCAATGGCCAGGGGTCCGTCCTTGGGCCTaGCGGTGGAATCCGGGGGTGGATCTGAGACCTCTA +
Preference number: 6 (lower is better)
Translates to: GISQWPGVRPWA*RWNPGVDLRPL
Trigger: TAGAGGTCTCAGATCCACCCCCGGATTCCACCGTCAGGCCCAAGGACGGACCCCTGGCCATTGACTGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000420294.1
CDS GCA 72 bp AAATACTGTCGTGAGAAAGGGCCCGGCTGCCCAGCGTaGCCCTCGACTCCTCCAGCTCATCCTCGGAGTCGT +
Preference number: 6 (lower is better)
Translates to: KYCREKGPGCPA*PSTPPAHPRSR
Trigger: ACGACTCCGAGGATGAGCTGGAGGAGTCGAGGGGCACGCTGGGCAGCCGGGCCCTTTCTCACGACAGTATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
CDS CCA 72 bp GCGCGCGATGAGAGCCGCCTCATCTTACTCGACCGCTaGTTGCGGGGCTTGACCTGGAGCTTGTGCTTAGCT +
Preference number: 6 (lower is better)
Translates to: ARDESRLILLDR*LRGLTWSLCLA
Trigger: AGCTAAGCACAAGCTCCAGGTCAAGCCCCGCAACCAGCGGTCGAGTAAGATGAGGCGGCTCTCATCGCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp CTCCTGGCCTCTCTCGGGCACCTTGGCTTGCTTTCCTaGTTCAGACTTCAGGGTCCGTGCCCCAGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: LLASLGHLGLLS*FRLQGPCPRLV
Trigger: GACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGAGAGAGGCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 72 bp CTTCACAGGCTCCTGGCCTCTCTCGGGCACCTTGGCTaGCTTTCCTGGTTCAGACTTCAGGGTCCGTGCCCC +
Preference number: 6 (lower is better)
Translates to: LHRLLASLGHLG*LSWFRLQGPCP
Trigger: GGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGAGAGAGGCCAGGAGCCTGTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 90 bp TTGGCTTGCTTTCCTGGTTCAGACTTCAGGGTCCGTGCCCCAGGCTaGTCTTCCTGGTTGGGTGGCTGGTCCAAGGTCCCCCTCCGCTTC +
Preference number: 6 (lower is better)
Translates to: LACFPGSDFRVRAPG*SSWLGGWSKVPLRF
Trigger: GAAGCGGAGGGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 90 bp GTCAGCTTGCTTCACAGGCTCCTGGCCTCTCTCGGGCACCTTGGCTaGCTTTCCTGGTTCAGACTTCAGGGTCCGTGCCCCAGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: VSLLHRLLASLGHLG*LSWFRLQGPCPRLV
Trigger: GACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGAGAGAGGCCAGGAGCCTGTGAAGCAAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 90 bp TGGCCTAGGGCCCACGGGTCACCACTGGTTGCTGATCAAGAGCCCTaGTCCCCATCTCTCACAGAAGTACCCGTGCGCCAGGAGGAAGTG +
Preference number: 6 (lower is better)
Translates to: WPRAHGSPLVADQEP*SPSLTEVPVRQEEV
Trigger: CACTTCCTCCTGGCGCACGGGTACTTCTGTGAGAGATGGGGACAAGGGCTCTTGATCAGCAACCAGTGGTGACCCGTGGGCCCTAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423771.5
CDS GCA 72 bp GTGCCAGGCTGTTGTCTGAGATCCGGGCAGAGACGGTaGTGTCGCTCACGTGGTCTGGAGACACGACAGAGA +
Preference number: 6 (lower is better)
Translates to: VPGCCLRSGQRR*CRSRGLETRQR
Trigger: TCTCTGTCGTGTCTCCAGACCACGTGAGCGACAGCACCGTCTCTGCCCGGATCTCAGACAACAGCCTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397899.7
ENST00000423771.5
ENST00000462314.1
CDS GCA 72 bp TTCACAGGCTCCTGGCCTCTCTCGGGCACCTTGGCTTaGTTTCCTGGTTCAGACTTCAGGGTCCGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: FTGSWPLSGTLA*FPGSDFRVRAP
Trigger: TGGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAGGTGCCCGAGAGAGGCCAGGAGCCTGTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 72 bp CGCGATGAGAGCCGCCTCATCTTACTCGACCGCTGGTaGCGGGGCTTGACCTGGAGCTTGTGCTTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: RDESRLILLDRW*RGLTWSLCLAA
Trigger: TGCAGCTAAGCACAAGCTCCAGGTCAAGCCCCGCAACCAGCGGTCGAGTAAGATGAGGCGGCTCTCATCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 72 bp TTTCCTGGTTCAGACTTCAGGGTCCGTGCCCCAGGCTaGTCTTCCTGGTTGGGTGGCTGGTCCAAGGTCCCC +
Preference number: 6 (lower is better)
Translates to: FPGSDFRVRAPG*SSWLGGWSKVP
Trigger: GGGGACCTTGGACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 72 bp GCCCACGGGTCACCACTGGTTGCTGATCAAGAGCCCTaGTCCCCATCTCTCACAGAAGTACCCGTGCGCCAG +
Preference number: 6 (lower is better)
Translates to: AHGSPLVADQEP*SPSLTEVPVRQ
Trigger: CTGGCGCACGGGTACTTCTGTGAGAGATGGGGACAAGGGCTCTTGATCAGCAACCAGTGGTGACCCGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423771.5
CDS CAA 72 bp CCTCTGAGTGGCCTAGGGCCCACGGGTCACCACTGGTaGCTGATCAAGAGCCCTTGTCCCCATCTCTCACAG +
Preference number: 6 (lower is better)
Translates to: PLSGLGPTGHHW*LIKSPCPHLSQ
Trigger: CTGTGAGAGATGGGGACAAGGGCTCTTGATCAGCAACCAGTGGTGACCCGTGGGCCCTAGGCCACTCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423771.5
CDS CAA 90 bp CCTCCCTTTCCTCTGAGTGGCCTAGGGCCCACGGGTCACCACTGGTaGCTGATCAAGAGCCCTTGTCCCCATCTCTCACAGAAGTACCCG +
Preference number: 6 (lower is better)
Translates to: PPFPLSGLGPTGHHW*LIKSPCPHLSQKYP
Trigger: CGGGTACTTCTGTGAGAGATGGGGACAAGGGCTCTTGATCAGCAACCAGTGGTGACCCGTGGGCCCTAGGCCACTCAGAGGAAAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423771.5
CDS GCA 72 bp CTTGGCTTGCTTTCCTGGTTCAGACTTCAGGGTCCGTaGCCCAGGCTTGTCTTCCTGGTTGGGTGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: LGLLSWFRLQGP*PRLVFLVGWLV
Trigger: GACCAGCCACCCAACCAGGAAGACAAGCCTGGGGCACGGACCCTGAAGTCTGAACCAGGAAAGCAAGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS GCA 72 bp GATTCCTCTTTGCAGCCCCTCCTTGAAGTTGAGCTTTaGCCCCTGCTTCCGGTCCACAGCGGGCTTCACAGG +
Preference number: 6 (lower is better)
Translates to: DSSLQPLLEVEL*PLLPVHSGLHR
Trigger: CCTGTGAAGCCCGCTGTGGACCGGAAGCAGGGGGCAAAGCTCAACTTCAAGGAGGGGCTGCAAAGAGGAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp CGACTCCTCCAGCTCATCCTCGGAGTCGTAGCCCACTaGCCCGGATTCGATGGCAATGACCTCATTCCTCGT +
Preference number: 6 (lower is better)
Translates to: RLLQLILGVVAH*PGFDGNDLIPR
Trigger: ACGAGGAATGAGGTCATTGCCATCGAATCCGGGCCAGTGGGCTACGACTCCGAGGATGAGCTGGAGGAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
CDS CCA 72 bp GATCCGGGCAGAGACGGTGCTGTCGCTCACGTGGTCTaGAGACACGACAGAGACCTTTATGGTGGTACCAGG +
Preference number: 6 (lower is better)
Translates to: DPGRDGAVAHVV*RHDRDLYGGTR
Trigger: CCTGGTACCACCATAAAGGTCTCTGTCGTGTCTCCAGACCACGTGAGCGACAGCACCGTCTCTGCCCGGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397899.7
ENST00000423771.5
ENST00000462314.1
CDS CAA 72 bp TTACTCGACCGCTGGTTGCGGGGCTTGACCTGGAGCTaGTGCTTAGCTGCAGAGTTGTCCAGGCAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: LLDRWLRGLTWS*CLAAELSRQEE
Trigger: CTCCTCCTGCCTGGACAACTCTGCAGCTAAGCACAAGCTCCAGGTCAAGCCCCGCAACCAGCGGTCGAGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397899.7
ENST00000423771.5
ENST00000462314.1
CDS CAA 72 bp AGCCGCCTCATCTTACTCGACCGCTGGTTGCGGGGCTaGACCTGGAGCTTGTGCTTAGCTGCAGAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: SRLILLDRWLRG*TWSLCLAAELS
Trigger: GGACAACTCTGCAGCTAAGCACAAGCTCCAGGTCAAGCCCCGCAACCAGCGGTCGAGTAAGATGAGGCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397899.7
ENST00000462314.1
CDS TCA 72 bp ATAACTGAAGTCAGCCACTGGTGCCAGGCTGTTGTCTaGGATCCGGGCAGAGACGGTGCTGTCGCTCACGTG +
Preference number: 6 (lower is better)
Translates to: ITEVSHWCQAVV*DPGRDGAVAHV
Trigger: CACGTGAGCGACAGCACCGTCTCTGCCCGGATCTCAGACAACAGCCTGGCACCAGTGGCTGACTTCAGTTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397899.7
ENST00000423771.5
ENST00000462314.1
CDS GCA 72 bp AAAGTGGCTTCTCCTCGTTTTCCTCCTCCTCTGGGGTaGACGTCAGGTCGCTCAGGGATTCAGACTGAGCGC +
Preference number: 6 (lower is better)
Translates to: KVASPRFPPPLG*TSGRSGIQTER
Trigger: GCGCTCAGTCTGAATCCCTGAGCGACCTGACGTGCACCCCAGAGGAGGAGGAAAACGAGGAGAAGCCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp TTTCCTCTGAGTGGCCTAGGGCCCACGGGTCACCACTaGTTGCTGATCAAGAGCCCTTGTCCCCATCTCTCA +
Preference number: 6 (lower is better)
Translates to: FPLSGLGPTGHH*LLIKSPCPHLS
Trigger: TGAGAGATGGGGACAAGGGCTCTTGATCAGCAACCAGTGGTGACCCGTGGGCCCTAGGCCACTCAGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423771.5
CDS CAA 72 bp GACAATGAGATTCCTCTTTGCAGCCCCTCCTTGAAGTaGAGCTTTGCCCCCTGCTTCCGGTCCACAGCGGGC +
Preference number: 6 (lower is better)
Translates to: DNEIPLCSPSLK*SFAPCFRSTAG
Trigger: GCCCGCTGTGGACCGGAAGCAGGGGGCAAAGCTCAACTTCAAGGAGGGGCTGCAAAGAGGAATCTCATTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 90 bp TGCTTCCGGTCCACAGCGGGCTTCACAGGGGTTATCAGGAAAGACTaGCTGCGAACAAAGTCAGCTTGCTTCACAGGCTCCTGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: CFRSTAGFTGVIRKD*LRTKSACFTGSWPL
Trigger: GAGAGGCCAGGAGCCTGTGAAGCAAGCTGACTTTGTTCGCAGCAAGTCTTTCCTGATAACCCCTGTGAAGCCCGCTGTGGACCGGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS TCA 72 bp CGGAGTCGTAGCCCACTGGCCCGGATTCGATGGCAATaGCCTCATTCCTCGTCTGACTTTGTTTCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RSRSPLARIRWQ*PHSSSDFVSRC
Trigger: GCACCTGGAAACAAAGTCAGACGAGGAATGAGGTCATTGCCATCGAATCCGGGCCAGTGGGCTACGACTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
ENST00000462314.1
CDS CCA 72 bp TCTGAGATCCGGGCAGAGACGGTGCTGTCGCTCACGTaGTCTGGAGACACGACAGAGACCTTTATGGTGGTA +
Preference number: 6 (lower is better)
Translates to: SEIRAETVLSLT*SGDTTETFMVV
Trigger: TACCACCATAAAGGTCTCTGTCGTGTCTCCAGACCACGTGAGCGACAGCACCGTCTCTGCCCGGATCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397899.7
ENST00000423771.5
ENST00000462314.1
CDS CCA 72 bp TTCCAAAAGTGGCTTCTCCTCGTTTTCCTCCTCCTCTaGGGTGCACGTCAGGTCGCTCAGGGATTCAGACTG +
Preference number: 6 (lower is better)
Translates to: FQKWLLLVFLLL*GARQVAQGFRL
Trigger: CAGTCTGAATCCCTGAGCGACCTGACGTGCACCCCAGAGGAGGAGGAAAACGAGGAGAAGCCACTTTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS TCA 72 bp GGCCCGGATTCGATGGCAATGACCTCATTCCTCGTCTaGCTTTGTTTCCAGGTGCTACTTCCTGTGGACGAC +
Preference number: 6 (lower is better)
Translates to: GPDSMAMTSFLV*LCFQVLLPVDD
Trigger: GTCGTCCACAGGAAGTAGCACCTGGAAACAAAGTCAGACGAGGAATGAGGTCATTGCCATCGAATCCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
ENST00000462314.1
CDS GCA 72 bp CCACAGCGGGCTTCACAGGGGTTATCAGGAAAGACTTaGTGCGAACAAAGTCAGCTTGCTTCACAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: PQRASQGLSGKT*CEQSQLASQAP
Trigger: AGGAGCCTGTGAAGCAAGCTGACTTTGTTCGCAGCAAGTCTTTCCTGATAACCCCTGTGAAGCCCGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CAA 72 bp TCCACAGCGGGCTTCACAGGGGTTATCAGGAAAGACTaGCTGCGAACAAAGTCAGCTTGCTTCACAGGCTCC +
Preference number: 6 (lower is better)
Translates to: STAGFTGVIRKD*LRTKSACFTGS
Trigger: GGAGCCTGTGAAGCAAGCTGACTTTGTTCGCAGCAAGTCTTTCCTGATAACCCCTGTGAAGCCCGCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp TTTTTAATCCAGCTCATCCTCGGAGTCGTAGCCCACTaGCCCGGATTCGATGGCAATGACCTCATTCCTCGT +
Preference number: 6 (lower is better)
Translates to: FLIQLILGVVAH*PGFDGNDLIPR
Trigger: ACGAGGAATGAGGTCATTGCCATCGAATCCGGGCCAGTGGGCTACGACTCCGAGGATGAGCTGGATTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462314.1
CDS CAA 72 bp GGATTCGATGGCAATGACCTCATTCCTCGTCTGACTTaGTTTCCAGGTGCTACTTCCTGTGGACGACGGCGA +
Preference number: 6 (lower is better)
Translates to: GFDGNDLIPRLT*FPGATSCGRRR
Trigger: TCGCCGTCGTCCACAGGAAGTAGCACCTGGAAACAAAGTCAGACGAGGAATGAGGTCATTGCCATCGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
ENST00000462314.1
CDS CAA 90 bp CACTGGCCCGGATTCGATGGCAATGACCTCATTCCTCGTCTGACTTaGTTTCCAGGTGCTACTTCCTGTGGACGACGGCGATTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: HWPGFDGNDLIPRLT*FPGATSCGRRRFFS
Trigger: AGAAAAGAATCGCCGTCGTCCACAGGAAGTAGCACCTGGAAACAAAGTCAGACGAGGAATGAGGTCATTGCCATCGAATCCGGGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
ENST00000462314.1
CDS TCA 72 bp CATCACTGCAGACTGAGCCAAGTTCTGATGGGACAATaGGATTCCTCTTTGCAGCCCCTCCTTGAAGTTGAG +
Preference number: 6 (lower is better)
Translates to: HHCRLSQVLMGQ*DSSLQPLLEVE
Trigger: CTCAACTTCAAGGAGGGGCTGCAAAGAGGAATCTCATTGTCCCATCAGAACTTGGCTCAGTCTGCAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp AACTGCAGAGCTTTAATCCGATCACACACATTTTCTTaGGAAAACACCCGCACAGGCCGAGTAGCGTCCTGT +
Preference number: 6 (lower is better)
Translates to: NCRALIRSHTFS*ENTRTGRVASC
Trigger: ACAGGACGCTACTCGGCCTGTGCGGGTGTTTTCCCAAGAAAATGTGTGTGATCGGATTAAAGCTCTGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
CDS CCA 72 bp TTCTGGCAAGTTCCATCCAGGATGGCTGATCTGTACTaGCATAACTGGCTCTCTTCAGCTGATGCAGTTCCT +
Preference number: 6 (lower is better)
Translates to: FWQVPSRMADLY*HNWLSSADAVP
Trigger: AGGAACTGCATCAGCTGAAGAGAGCCAGTTATGCCAGTACAGATCAGCCATCCTGGATGGAACTTGCCAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS CCA 72 bp TCCTCGTCTGACTTTGTTTCCAGGTGCTACTTCCTGTaGACGACGGCGATTCTTTTCTCTTCTTCTTCCCAA +
Preference number: 6 (lower is better)
Translates to: SSSDFVSRCYFL*TTAILFSSSSQ
Trigger: TTGGGAAGAAGAAGAGAAAAGAATCGCCGTCGTCCACAGGAAGTAGCACCTGGAAACAAAGTCAGACGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397899.7
ENST00000415261.5
ENST00000423771.5
ENST00000428096.5
ENST00000462314.1
CDS CCA 72 bp AGCTTGAGATTTCTTTCTGGCAAGTTCCATCCAGGATaGCTGATCTGTACTGGCATAACTGGCTCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: SLRFLSGKFHPG*LICTGITGSLQ
Trigger: CTGAAGAGAGCCAGTTATGCCAGTACAGATCAGCCATCCTGGATGGAACTTGCCAGAAAGAAATCTCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397899.7
CDS TCA 72 bp ACCTATTTTATAATCTGGGGCATGTCACTCCAAGCTTaGGATTTCTTTCTGGCAAGTTCCATCCAGGATGGC +
Preference number: 6 (lower is better)
Translates to: TYFIIWGMSLQA*DFFLASSIQDG
Trigger: GCCATCCTGGATGGAACTTGCCAGAAAGAAATCTCAAGCTTGGAGTGACATGCCCCAGATTATAAAATAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397899.7