Pregenerated sensors for CRABP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000166426Ensembl transcript IDs: ENST00000299529.7, ENST00000406419.1, ENST00000560753.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATTCTGGTGCAGACCACGTCATCGGCGCCAAACGTCAGGATAAGTTCATCGTTGGGGTCCAGTAGGTTTTaGGGCCGTCCCCTTCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: ILVQTTSSAPNVRISSSLGSSRF*GRPLQE Trigger: TTCTTGAAGGGGACGGCCCCAAAACCTACTGGACCC...CAACGATGAACTTATCCTGACGTTTGGCGCCGATGACGTGGTCTGCACCAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| 3UTR-3UTR TCA 90 bp | TTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCGGCAGCTCAGAACTATaGCATATTCCTCAGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: LVGEKGGPLAAQNYDIFLGSSEL*HIPQGS Trigger: GCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCC...GAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| 3UTR-3UTR TCA 90 bp | CCTGAAAGTAGGAGCAAGCCAGCTGCCTTCACTCTCGGACATAAATTCTGGTGCGGCAGCTCAGAACTATaGCATATTCCTCAGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PESRSKPAAFTLGHKFWCGSSEL*HIPQGS Trigger: GCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCC...GCACCAGAATTTATGTCCGAGAGTGAAGGCAGCTGGCTTGCTCCTACTTTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| 3UTR-3UTR CCA 90 bp | CAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTTCCTGAAAGTCTCGGACATAAATTCTaGTGCAGACCACGTCATCGG | + |
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Preference number: 2 (lower is better) Translates to: QLRTMTYSSGEPASLPESLGHKF*CRPRHR Trigger: CCGATGACGTGGTCTGCACCAGAATTTATGTCCGAG...ACTTTCAGGAAGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| 3UTR-3UTR GCA 90 bp | TTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCCCTTCAAGAAGAGTTTaGGTGCAGTGGATCTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LVGEKGGPLAAQNYDIFLPSRRV*VQWILF Trigger: GAACAAGATCCACTGCACGCAAACTCTTCTTGAAGG...GAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| 3UTR-3UTR CCA 90 bp | TTCGAAACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAACTACAACATTGTCATaGGGAAAACGGGATCACCTA | + |
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Preference number: 2 (lower is better) Translates to: FETVQMPNYGALGIQEAPTTTLS*GKRDHL Trigger: TAGGTGATCCCGTTTTCCCCATGACAATGTTGTAGT...TGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGTTTCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| 3UTR CCA 72 bp | GTTCATCGTTGGCCAGCTCACGGGTCCAGTAGGTTTTaGGGCCGTCCCCTTCAAGAAGAGTTTGCGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: VHRWPAHGSSRF*GRPLQEEFACS Trigger: ACTGCACGCAAACTCTTCTTGAAGGGGACGGCCCCAAAACCTACTGGACCCGTGAGCTGGCCAACGATGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| 3UTR-3UTR CAA 90 bp | CAGGATAAGTTCATCGTTGGCCAGCTCACGGGTCCAGTAGGTTTTGGGGCCGTCCCCTTCAAGAAGAGTTaGCGTGCAGTGGATCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: QDKFIVGQLTGPVGFGAVPFKKS*RAVDLV Trigger: AACAAGATCCACTGCACGCAAACTCTTCTTGAAGGG...GACGGCCCCAAAACCTACTGGACCCGTGAGCTGGCCAACGATGAACTTATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| 3UTR-3UTR CAA 90 bp | TTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGATAAGTTCATCGTaGGCCAGCTCACGGGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LVGEKGGPLAAQNYDIFLRISSS*ASSRVQ Trigger: CTGGACCCGTGAGCTGGCCAACGATGAACTTATCCT...GAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| 3UTR-3UTR CAA 90 bp | ACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAAGGCCTCGGGATCACCTAATATaGGTAGGGGAAAAGGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: TVQMPNYGALGIQEAPRPRDHLI*VGEKGG Trigger: ACCGCCCTTTTCCCCTACCAATATTAGGTGATCCCG...AGGCCTTGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR GCA 90 bp | AGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCTGGGGCCTCACCCTaGACTTGCGTCCGTCCACGG | + |
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Preference number: 4 (lower is better) Translates to: RAVHWQLRTMTYSSGEPASGASP*TCVRPR Trigger: CCGTGGACGGACGCAAGTGCAGGGTGAGGCCCCAGA...TGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR CCA 90 bp | CAGGATAAGTTCATCGTTGGCCAGCTCACGGGTCCAGTAGGTTTTGGGGCCGTCTTCCTCCAGCAGCAGTaGGCCATGGGCACCGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: QDKFIVGQLTGPVGFGAVFLQQQ*AMGTER Trigger: CCGCTCGGTGCCCATGGCCCACTGCTGCTGGAGGAA...GACGGCCCCAAAACCTACTGGACCCGTGAGCTGGCCAACGATGAACTTATCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR CCA 90 bp | AGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTTCCTGAAAGTAGGAGCCGGCGAAGTTGGGCATaGTGGCGGTGGCGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RTMTYSSGEPASLPESRSRRSWA*WRWRRR Trigger: CCGCCGCCGCCACCGCCACCATGCCCAACTTCGCCG...GCTCCTACTTTCAGGAAGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR GCA 90 bp | AAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTTGGCGGATCTCCACGTaGGGCTTGGACGCAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: KRAVHWQLRTMTYSSGEPWRIST*GLDAAA Trigger: AGCGGCTGCGTCCAAGCCGCACGTGGAGATCCGCCA...AGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR CCA 90 bp | ATTCTGGTGCAGACCACGTCATCGGCGCCAAACGTCAGGATAAGTTCATCGTTGAGCAGCAGTGGGCCATaGGCACCGAGCGGGGACACG | + |
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Preference number: 4 (lower is better) Translates to: ILVQTTSSAPNVRISSSLSSSGP*APSGDT Trigger: CGTGTCCCCGCTCGGTGCCCATGGCCCACTGCTGCT...CAACGATGAACTTATCCTGACGTTTGGCGCCGATGACGTGGTCTGCACCAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR GCA 90 bp | AAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCCTCACCCTGCACTTaGGTCCGTCCACGGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KRAVHWQLRTMTYSSGEPASPCT*VRPRSP Trigger: AGGAGACCGTGGACGGACGCAAGTGCAGGGTGAGGC...AGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR TCA 90 bp | GATAAGTTCATCGTTGGCCAGCTCACGGGTCCAGTAGGTTTTGGGGCCGTCCCCCCGTGGTGGATGTCTTaGTGTAGAACTGATCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: DKFIVGQLTGPVGFGAVPPWWMS*CRTDPR Trigger: ACGGGGATCAGTTCTACATCAAGACATCCACCACGG...GGGGACGGCCCCAAAACCTACTGGACCCGTGAGCTGGCCAACGATGAACTTATC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR GCA 90 bp | AGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCACGTCGAAATTCTCGCTaGTGCGCATCTTCCAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RAVHWQLRTMTYSSGEPARRNSR*CASSRC Trigger: GCACCTGGAAGATGCGCAGCAGCGAGAATTTCGACG...TGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CCA 90 bp | ATATTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCAGGTGCCGGCGAAGTTaGGCATGGTGGCGGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ILVGEKGGPLAAQNYDIFRCRRS*AWWRWR Trigger: CCGCCACCGCCACCATGCCCAACTTCGCCGGCACCT...GAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR GCA 90 bp | AGCCTGCATCCCTTCCTGAAAGTAGGAGCAAGCCAGCTGCCTTCACTCTCGGACGGACATAAATTCTGGTaGAGACCACGTCATCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SLHPFLKVGASQLPSLSDGHKFW*RPRHRR Trigger: GCGCCGATGACGTGGTCTGCACCAGAATTTATGTCC...GTCCGAGAGTGAAGGCAGCTGGCTTGCTCCTACTTTCAGGAAGGGATGCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR CCA 90 bp | TTCGAAACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCATCTCCACGTGCGGCTTaGACGCAGCCGCTACGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FETVQMPNYGALGIQEAPSPRAA*TQPLRP Trigger: TGGCCGTAGCGGCTGCGTCCAAGCCGCACGTGGAGA...TGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGTTTCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR GCA 90 bp | GGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTGGACATAAATTCTGGTaGAGACCACGTCATCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: GPLAAQNYDIFLRGACIPGHKFW*RPRHRR Trigger: GCGCCGATGACGTGGTCTGCACCAGAATTTATGTCC...AGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR GCA 90 bp | CCCTTCCTGAAAGTAGGAGCAAGCCAGCTGCCTTCACTCTCGGACATAAATTCTAGGCGCGCCACAGGCTaGAAAGGGAGACACAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: PFLKVGASQLPSLSDINSRRATG*KGRHRF Trigger: GAACCTGTGTCTCCCTTTGCAGCCTGTGGCGCGCCT...AGAATTTATGTCCGAGAGTGAAGGCAGCTGGCTTGCTCCTACTTTCAGGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR CCA 90 bp | ACGGGATCACCTAATATTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAAGGGTCCAGTAGGTTTTaGGGCCGTCCCCTTCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TGSPNIGRGKGRSTGSSEGSSRF*GRPLQE Trigger: TTCTTGAAGGGGACGGCCCCAAAACCTACTGGACCC...TTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAATATTAGGTGATCCCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR GCA 90 bp | ATATTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCTGCGCATCTTCCAGGTaGCGGCGAAGTTGGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: ILVGEKGGPLAAQNYDIFCASSR*RRSWAW Trigger: CCATGCCCAACTTCGCCGGCACCTGGAAGATGCGCA...GAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR GCA 90 bp | GAAACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAAGGGGCGTTCACACCCAGTaGCTTGAGCAGCTCGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: ETVQMPNYGALGIQEAPRGVHTQ*LEQLVE Trigger: TTCGACGAGCTGCTCAAGGCACTGGGTGTGAACGCC...CCTTGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CCA 90 bp | AACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAAGGCCCCACTTTCCTCAGCATaGCGTTCACACCCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: NRANAKLWSTRDTRGTKAPLSSA*RSHPVP Trigger: AGGCACTGGGTGTGAACGCCATGCTGAGGAAAGTGG...GGCCTTGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CCA 90 bp | GGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTAAAAGGGCGGTCCACTaGCAGCTCAGAACTATGACA | + |
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Preference number: 4 (lower is better) Translates to: GPLAAQNYDIFLRGACIPKRAVH*QLRTMT Trigger: TGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTT...AGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR TCA 90 bp | AACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAAGGCCTCACACCCAGTGCCTTaGGCAGCTCGTCGAAATTCT | + |
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Preference number: 4 (lower is better) Translates to: NRANAKLWSTRDTRGTKASHPVP*AARRNS Trigger: AGAATTTCGACGAGCTGCTCAAGGCACTGGGTGTGA...GGCCTTGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR TCA 90 bp | TTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCCCGTGGTGGATGTCTTaGTGTAGAACTGATCCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LVGEKGGPLAAQNYDIFLPWWMS*CRTDPR Trigger: ACGGGGATCAGTTCTACATCAAGACATCCACCACGG...GAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR TCA 90 bp | ACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAAGGCCTGGCAGCTCAGAACTATaGCATATTCCTCAGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TVQMPNYGALGIQEAPRPGSSEL*HIPQGS Trigger: GCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCC...AGGCCTTGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR TCA 90 bp | ATTCTGGTGCAGACCACGTCATCGGCGCCAAACGTCAGGATAAGTTCATCGTTGGGCAGCTCAGAACTATaGCATATTCCTCAGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ILVQTTSSAPNVRISSSLGSSEL*HIPQGS Trigger: GCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCC...CAACGATGAACTTATCCTGACGTTTGGCGCCGATGACGTGGTCTGCACCAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR GCA 90 bp | AGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCACCTTCAAGAAGAGTTTaGGTGCAGTGGATCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: RAVHWQLRTMTYSSGEPAPSRRV*VQWILF Trigger: GAACAAGATCCACTGCACGCAAACTCTTCTTGAAGG...TGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR CCA 90 bp | CAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTTCCTGAAAGTCCACTTTCCTCAGCATaGCGTTCACACCCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QLRTMTYSSGEPASLPESPLSSA*RSHPVP Trigger: AGGCACTGGGTGTGAACGCCATGCTGAGGAAAGTGG...ACTTTCAGGAAGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR GCA 90 bp | GGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCATGACTTCGAAACCGTaGAAATGCCAAACTATGGAG | + |
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Preference number: 4 (lower is better) Translates to: GGPLAAQNYDIFLRGACIMTSKP*KCQTME Trigger: CTCCATAGTTTGGCATTTGCACGGTTTCGAAGTCAT...GATGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CCA 90 bp | TTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCCTCGGACATAAATTCTaGTGCAGACCACGTCATCGG | + |
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Preference number: 4 (lower is better) Translates to: LVGEKGGPLAAQNYDIFLLGHKF*CRPRHR Trigger: CCGATGACGTGGTCTGCACCAGAATTTATGTCCGAG...GAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR GCA 90 bp | AAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTCCTTCAAGAAGAGTTTaGGTGCAGTGGATCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KRAVHWQLRTMTYSSGEPPSRRV*VQWILF Trigger: GAACAAGATCCACTGCACGCAAACTCTTCTTGAAGG...AGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR CCA 90 bp | TTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCTCTCATTCTCCCAAGTaGCTAAACTCCTGCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: LVGEKGGPLAAQNYDIFLSHSPK*LNSCTC Trigger: GCAAGTGCAGGAGTTTAGCCACTTGGGAGAATGAGA...GAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CCA 90 bp | GATCACCTAATATTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATCTCGGACATAAATTCTaGTGCAGACCACGTCATCGG | + |
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Preference number: 4 (lower is better) Translates to: DHLILVGEKGGPLAAQNYLGHKF*CRPRHR Trigger: CCGATGACGTGGTCTGCACCAGAATTTATGTCCGAG...ATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAATATTAGGTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CCA 90 bp | CCCTTCCTGAAAGTAGGAGCAAGCCAGCTGCCTTCACTCTCGGACATAAATTCTAAAAGGGCGGTCCACTaGCAGCTCAGAACTATGACA | + |
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Preference number: 4 (lower is better) Translates to: PFLKVGASQLPSLSDINSKRAVH*QLRTMT Trigger: TGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTT...AGAATTTATGTCCGAGAGTGAAGGCAGCTGGCTTGCTCCTACTTTCAGGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR GCA 90 bp | ACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAAGGCCTCAAGAAGAGTTTGCGTaGAGTGGATCTTGTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: TVQMPNYGALGIQEAPRPQEEFA*SGSCSH Trigger: ATGAGAACAAGATCCACTGCACGCAAACTCTTCTTG...AGGCCTTGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CCA 90 bp | CAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTTCCTGAAAGTTCTCATTCTCCCAAGTaGCTAAACTCCTGCAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: QLRTMTYSSGEPASLPESSHSPK*LNSCKE Trigger: TTCCTTGCAGGAGTTTAGCCACTTGGGAGAATGAGA...ACTTTCAGGAAGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR CCA 90 bp | GAAACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAAGGGCAAATGCCAAACTATaGAGCACTAGGGATACAAGA | + |
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Preference number: 4 (lower is better) Translates to: ETVQMPNYGALGIQEAPRANAKL*STRDTR Trigger: TCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGC...CCTTGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CCA 90 bp | ATATTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCACTACAACATTGTCATaGGGAAAACGGGATCACCTA | + |
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Preference number: 4 (lower is better) Translates to: ILVGEKGGPLAAQNYDIFTTTLS*GKRDHL Trigger: TAGGTGATCCCGTTTTCCCCATGACAATGTTGTAGT...GAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS CCA 90 bp | CGCGCCACAGGCTGCAAAGGGAGACACAGGTTCCTCCAGCAGCAGTaGGCCATGGGCACCGAGCGGGGACACGGGGACGCTGTAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RATGCKGRHRFLQQQ*AMGTERGHGDAVVA Trigger: AGCCACTACAGCGTCCCCGTGTCCCCGCTCGGTGCCCATGGCCCACTGCTGCTGGAGGAACCTGTGTCTCCCTTTGCAGCCTGTGGCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR CAA 90 bp | ACGGGATCACCTAATATTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAAATCTCCACGTGCGGCTaGGACGCAGCCGCTACGGCC | + |
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Preference number: 5 (lower is better) Translates to: TGSPNIGRGKGRSTGSSEISTCG*DAAATA Trigger: GGCCGTAGCGGCTGCGTCCAAGCCGCACGTGGAGAT...TTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAATATTAGGTGATCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CAA 90 bp | AAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGGCCTCACCCTGCACTaGCGTCCGTCCACGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: KRAVHWQLRTMTYSSGEPGLTLH*RPSTVS Trigger: GGAGACCGTGGACGGACGCAAGTGCAGGGTGAGGCC...AGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR CAA 90 bp | AGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTTCCTGAAAGTAGGAGCCAGGTGCCGGCGAAGTaGGGCATGGTGGCGGTGGCG | + |
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Preference number: 5 (lower is better) Translates to: RTMTYSSGEPASLPESRSQVPAK*GMVAVA Trigger: CGCCACCGCCACCATGCCCAACTTCGCCGGCACCTG...GCTCCTACTTTCAGGAAGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CAA 90 bp | CCTGAAAGTAGGAGCAAGCCAGCTGCCTTCACTCTCGGACATAAATTCTGGTGCATCTCCACGTGCGGCTaGGACGCAGCCGCTACGGCC | + |
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Preference number: 5 (lower is better) Translates to: PESRSKPAAFTLGHKFWCISTCG*DAAATA Trigger: GGCCGTAGCGGCTGCGTCCAAGCCGCACGTGGAGAT...GCACCAGAATTTATGTCCGAGAGTGAAGGCAGCTGGCTTGCTCCTACTTTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS-3UTR CAA 90 bp | ACCGTGCAAATGCCAAACTATGGAGCACTAGGGATACAAGAGGCACCAAGGCCTGCTAAACTCCTGCACTaGCGTCCGTCCACGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TVQMPNYGALGIQEAPRPAKLLH*RPSTVS Trigger: GGAGACCGTGGACGGACGCAAGTGCAGGAGTTTAGC...AGGCCTTGGTGCCTCTTGTATCCCTAGTGCTCCATAGTTTGGCATTTGCACGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CAA 90 bp | GGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTAGGATAAGTTCATCGTaGGCCAGCTCACGGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GPLAAQNYDIFLRGACIPRISSS*ASSRVQ Trigger: CTGGACCCGTGAGCTGGCCAACGATGAACTTATCCT...AGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR CAA 90 bp | AGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCACGGGATCACCTAATATaGGTAGGGGAAAAGGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: RAVHWQLRTMTYSSGEPARDHLI*VGEKGG Trigger: ACCGCCCTTTTCCCCTACCAATATTAGGTGATCCCG...TGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CAA 90 bp | ACGGGATCACCTAATATTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAATTCACACCCAGTGCCTaGAGCAGCTCGTCGAAATTC | + |
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Preference number: 5 (lower is better) Translates to: TGSPNIGRGKGRSTGSSEFTPSA*SSSSKF Trigger: GAATTTCGACGAGCTGCTCAAGGCACTGGGTGTGAA...TTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAATATTAGGTGATCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS GCA 90 bp | AGTAGGAGCAAGCCAGCTGCCTTCACTCTCGGACATAAATTCTGGTaGAGACCACGTCATCGGCGCCAAACGTCTGCAGAGAAGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: SRSKPAAFTLGHKFW*RPRHRRQTSAEKKK Trigger: TTTCTTCTTCTCTGCAGACGTTTGGCGCCGATGACGTGGTCTGCACCAGAATTTATGTCCGAGAGTGAAGGCAGCTGGCTTGCTCCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560753.1 |
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| CDS-3UTR CAA 90 bp | GATCACCTAATATTGGTAGGGGAAAAGGGCGGTCCACTGGCAGCTCAGAACTATAGGATAAGTTCATCGTaGGCCAGCTCACGGGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: DHLILVGEKGGPLAAQNYRISSS*ASSRVQ Trigger: CTGGACCCGTGAGCTGGCCAACGATGAACTTATCCT...ATAGTTCTGAGCTGCCAGTGGACCGCCCTTTTCCCCTACCAATATTAGGTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299529.7 |
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| CDS-3UTR CAA 90 bp | AAAAGGGCGGTCCACTGGCAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTCCCTTCAAGAAGAGTTaGCGTGCAGTGGATCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: KRAVHWQLRTMTYSSGEPPFKKS*RAVDLV Trigger: AACAAGATCCACTGCACGCAAACTCTTCTTGAAGGG...AGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTGCCAGTGGACCGCCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS-3UTR CAA 90 bp | CAGCTCAGAACTATGACATATTCCTCAGGGGAGCCTGCATCCCTTCCTGAAAGTAAGCCTTCTCCGACCTaGAAGTTGATCTCAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: QLRTMTYSSGEPASLPESKPSPT*KLISVV Trigger: CACCACTGAGATCAACTTCAAGGTCGGAGAAGGCTT...ACTTTCAGGAAGGGATGCAGGCTCCCCTGAGGAATATGTCATAGTTCTGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299529.7 ENST00000406419.1 |
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| CDS CCA 72 bp | GGCTGCAAAGGGAGACACAGGTTCCTCCAGCAGCAGTaGGCCATGGGCACCGAGCGGGGACACGGGGACGCT | + |
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Preference number: 6 (lower is better) Translates to: GCKGRHRFLQQQ*AMGTERGHGDA Trigger: AGCGTCCCCGTGTCCCCGCTCGGTGCCCATGGCCCACTGCTGCTGGAGGAACCTGTGTCTCCCTTTGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS GCA 72 bp | ACACGGGGACGCTGTAGTGGCTCTGGGGCCTCACCCTaGACTTGCGTCCGTCCACGGTCTCCTCCTCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: TRGRCSGSGASP*TCVRPRSPPQS Trigger: GCTTTGAGGAGGAGACCGTGGACGGACGCAAGTGCAGGGTGAGGCCCCAGAGCCACTACAGCGTCCCCGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS GCA 72 bp | GGACGCTGTAGTGGCTCTGGGGCCTCACCCTGCACTTaGGTCCGTCCACGGTCTCCTCCTCAAAGCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GRCSGSGASPCT*VRPRSPPQSLL Trigger: GAGAAGGCTTTGAGGAGGAGACCGTGGACGGACGCAAGTGCAGGGTGAGGCCCCAGAGCCACTACAGCGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS GCA 72 bp | GTGGCTAAACTCCTGCAAGGAAGGCGCGCCACAGGCTaGAAAGGGAGACACAGGTTCCTCCAGCAGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: VAKLLQGRRATG*KGRHRFLQQQW Trigger: CCACTGCTGCTGGAGGAACCTGTGTCTCCCTTTGCAGCCTGTGGCGCGCCTTCCTTGCAGGAGTTTAGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000406419.1 |
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| CDS GCA 72 bp | AAGCCAGCTGCCTTCACTCTCGGACATAAATTCTGGTaGAGACCACGTCATCGGCGCCAAACGTCTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: KPAAFTLGHKFW*RPRHRRQTSAE Trigger: CTCTGCAGACGTTTGGCGCCGATGACGTGGTCTGCACCAGAATTTATGTCCGAGAGTGAAGGCAGCTGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560753.1 |
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