Pregenerated sensors for CR1L (Homo sapiens)

Ensembl gene IDs: ENSG00000197721

Ensembl transcript IDs: ENST00000294997.10

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CAA 90 bp	GTACCAAGTAAAGTGCCAACTATAAGAGCATCATGTGAACCAGCACCAACAGGAATTTGGACAAAAGATTaGTTCACACACTGGAACACT	+
Preference number: 3 (lower is better) Translates to: VPSKVPTIRASCEPAPTGIWTKD*FTHWNT Trigger: AGTGTTCCAGTGTGTGAACAAATCTTTTGTCCAAAT...TCCTGTTGGTGCTGGTTCACATGATGCTCTTATAGTTGGCACTTTACTTGGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294997.10
CDS-3UTR TCA 90 bp	GTACCAAGTAAAGTGCCAACTATAAGAGCATCATGTGAACCAGCACCAACAGGAACATCTGGAGGTGGCTaGCATACCCTGGAGCAGCTT	+
Preference number: 4 (lower is better) Translates to: VPSKVPTIRASCEPAPTGTSGGG*HTLEQL Trigger: AAGCTGCTCCAGGGTATGTCAGCCACCTCCAGATGT...TCCTGTTGGTGCTGGTTCACATGATGCTCTTATAGTTGGCACTTTACTTGGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294997.10
CDS-3UTR GCA 90 bp	GTACCAAGTAAAGTGCCAACTATAAGAGCATCATGTGAACCAGCACCAACAGGACCCTGGGGTGTGCAGTaGAAATACGTAGATCCTCTG	+
Preference number: 4 (lower is better) Translates to: VPSKVPTIRASCEPAPTGPWGVQ*KYVDPL Trigger: CAGAGGATCTACGTATTTGCACTGCACACCCCAGGG...TCCTGTTGGTGCTGGTTCACATGATGCTCTTATAGTTGGCACTTTACTTGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294997.10
CDS-3UTR CCA 90 bp	GTACCAAGTAAAGTGCCAACTATAAGAGCATCATGTGAACCAGCACCAACAGGAGTGGCTGACATACCCTaGAGCAGCTTGGTAACTCTG	+
Preference number: 4 (lower is better) Translates to: VPSKVPTIRASCEPAPTGVADIP*SSLVTL Trigger: CAGAGTTACCAAGCTGCTCCAGGGTATGTCAGCCAC...TCCTGTTGGTGCTGGTTCACATGATGCTCTTATAGTTGGCACTTTACTTGGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294997.10
CDS-3UTR TCA 90 bp	GTACCAAGTAAAGTGCCAACTATAAGAGCATCATGTGAACCAGCACCAACAGGATATAAGAGCATCATGTaGACCAGCACCAACAGGAAG	+
Preference number: 4 (lower is better) Translates to: VPSKVPTIRASCEPAPTGYKSIM*TSTNRK Trigger: CTTCCTGTTGGTGCTGGTTCACATGATGCTCTTATA...TCCTGTTGGTGCTGGTTCACATGATGCTCTTATAGTTGGCACTTTACTTGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294997.10
CDS-3UTR TCA 90 bp	GTACCAAGTAAAGTGCCAACTATAAGAGCATCATGTGAACCAGCACCAACAGGAGAGCTGCCTTTTAATTaGAATCCTTCATCACAAACA	+
Preference number: 4 (lower is better) Translates to: VPSKVPTIRASCEPAPTGELPFN*NPSSQT Trigger: TGTTTGTGATGAAGGATTTCAATTAAAAGGCAGCTC...TCCTGTTGGTGCTGGTTCACATGATGCTCTTATAGTTGGCACTTTACTTGGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000294997.10
CDS-3UTR CAA 90 bp	GTACCAAGTAAAGTGCCAACTATAAGAGCATCATGTGAACCAGCACCAACAGGACTGAACTGGATGTCTTaGATCACATGTGCCATGCCA	+
Preference number: 5 (lower is better) Translates to: VPSKVPTIRASCEPAPTGLNWMS*ITCAMP Trigger: TGGCATGGCACATGTGATCAAAGACATCCAGTTCAG...TCCTGTTGGTGCTGGTTCACATGATGCTCTTATAGTTGGCACTTTACTTGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294997.10
CDS-3UTR CAA 90 bp	GTACCAAGTAAAGTGCCAACTATAAGAGCATCATGTGAACCAGCACCAACAGGACGACATGATTTACGTTaGCACTTGTCCTTAGCACTT	+
Preference number: 5 (lower is better) Translates to: VPSKVPTIRASCEPAPTGRHDLR*HLSLAL Trigger: AAGTGCTAAGGACAAGTGCAAACGTAAATCATGTCG...TCCTGTTGGTGCTGGTTCACATGATGCTCTTATAGTTGGCACTTTACTTGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000294997.10

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