Pregenerated sensors for CR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000203710Ensembl transcript IDs: ENST00000367049.9, ENST00000367051.6, ENST00000367052.6, ENST00000367053.6, ENST00000400960.7, ENST00000434033.5, ENST00000436595.1, ENST00000450439.5, ENST00000529814.1, ENST00000530487.5, ENST00000534202.5
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTTGATCCAAACTGTGTATCTGTGTTTATATGCACCATTCCATTaGAGGGTTCTGGTGGAGGTCCACATGATTTTCGTCTACAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: LLIQTVYLCLYAPFH*RVLVEVHMIFVYSC Trigger: ACAACTGTAGACGAAAATCATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATACACAGTTTGGATCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR-3UTR CCA 90 bp | GGTCCACATGATTTTCGTCTACAGTTGTCTTCAACACTTGACCAGACCAAGTTTGCGGCTGACACACCCTaGAGCAGCTTGGTAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: GPHDFRLQLSSTLDQTKFAADTP*SSLVTL Trigger: CAGAGTTACCAAGCTGCTCCAGGGTGTGTCAGCCGC...AAACTTGGTCTGGTCAAGTGTTGAAGACAACTGTAGACGAAAATCATGTGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGCCACAAGGAATTCGTTaGCAAATTGGCGGCTTCGTG | + |
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Preference number: 2 (lower is better) Translates to: SHVTLLPETRQVVDGEPMPQGIR*QIGGFV Trigger: CACGAAGCCGCCAATTTGTCAACGAATTCCTTGTGG...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR-3UTR GCA 90 bp | GTATCTGTGTTTATATGCACCATTCCATTGAAGGGTTCTGGTGGAGGTCCACATATCACAGGATTTCACTaGACATCTCGGGGCTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: VSVFICTIPLKGSGGGPHITGFH*TSRGFR Trigger: CCTGAAGCCCCGAGATGTGCAGTGAAATCCTGTGAT...ATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGCGTAGGACTGGCAAATaGAAACTGCTCTGGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: SHVTLLPETRQVVDGEPMRRTGK*KLLWGF Trigger: AAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACG...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR CAA 90 bp | ACTGTTGATCCAAACTGTGTATCTGTGTTTATATGCACCATTCCATaGAAGGGTTCTGGTGGAGGTCCACATGATTTTCGTCTACAGTTG | + |
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Preference number: 2 (lower is better) Translates to: TVDPNCVSVFICTIP*KGSGGGPHDFRLQL Trigger: CAACTGTAGACGAAAATCATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATACACAGTTTGGATCAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR CAA 90 bp | ACCACCTATTTGCCCTTCTTTCTTGGTGACCTAGCTGTATGTCCTTaGCCCATTTTTGTTGGGTGGAGAGAAGTTTGGTCTTTAATTTTT | + |
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Preference number: 2 (lower is better) Translates to: TTYLPFFLGDLAVCP*PIFVGWREVWSLIF Trigger: AAAAATTAAAGACCAAACTTCTCTCCACCCAACAAAAATGGGCAAAGGACATACAGCTAGGTCACCAAGAAAGAAGGGCAAATAGGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000367049.9 ENST00000400960.7 |
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| 3UTR-3UTR GCA 90 bp | GCACTGGTAAGTTACCACCGTTCCATTGTGAAAAGATGTTCTATTGTTGCTGTAGATCTCACAAATAGGTaGCTTCTTATCCCATGTGAC | + |
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Preference number: 2 (lower is better) Translates to: ALVSYHRSIVKRCSIVAVDLTNR*LLIPCD Trigger: GTCACATGGGATAAGAAGGCACCTATTTGTGAGATC...TACAGCAACAATAGAACATCTTTTCACAATGGAACGGTGGTAACTTACCAGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR-3UTR CAA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGCCCACAAGGAATTCGTaGACAAATTGGCGGCTTCGT | + |
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Preference number: 3 (lower is better) Translates to: INWDRRTGKWKLLWGFTVPTRNS*TNWRLR Trigger: ACGAAGCCGCCAATTTGTCAACGAATTCCTTGTGGG...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGAGTTGTCTTCAACACTaGACCAGACCAAGTTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: SHVTLLPETRQVVDGEPMSCLQH*TRPSFL Trigger: TAGAAAACTTGGTCTGGTCAAGTGTTGAAGACAACT...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR-3UTR CAA 90 bp | GCACTGGTAAGTTACCACCGTTCCATTGTGAAAAGATGTTCTATTGTTGCTGTAATATGCACCATTCCATaGAAGGGTTCTGGTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: ALVSYHRSIVKRCSIVAVICTIP*KGSGGG Trigger: ACCTCCACCAGAACCCTTCAATGGAATGGTGCATAT...TACAGCAACAATAGAACATCTTTTCACAATGGAACGGTGGTAACTTACCAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR-3UTR CAA 90 bp | GCACTGGTAAGTTACCACCGTTCCATTGTGAAAAGATGTTCTATTGTTGCTGTACTCCATTGGATATGGTaGGAGGTGGCTCACAAGATA | + |
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Preference number: 3 (lower is better) Translates to: ALVSYHRSIVKRCSIVAVLHWIW*EVAHKI Trigger: TATCTTGTGAGCCACCTCCAACCATATCCAATGGAG...TACAGCAACAATAGAACATCTTTTCACAATGGAACGGTGGTAACTTACCAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR TCA 72 bp | CAAACTGTGTATCTGTGTTTATATGCACCATTCCATTaGAGGGTTCTGGTGGAGGTCCACATGATTTTCGTC | + |
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Preference number: 3 (lower is better) Translates to: QTVYLCLYAPFH*RVLVEVHMIFV Trigger: GACGAAAATCATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATACACAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR TCA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGTCTGGGGCATTGCATTaGCCCCAGGCCACCGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: INWDRRTGKWKLLWGFTVSGALH*PQATGS Trigger: GCTGCCGGTGGCCTGGGGTCAATGCAATGCCCCAGA...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR GCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGGCCATTCTGGGGCATTaGATTGACCCCAGGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: SHVTLLPETRQVVDGEPMAILGH*IDPRPP Trigger: CGGTGGCCTGGGGTCAATGCAATGCCCCAGAATGGC...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGAGGCTCCGGGCTTCTTaGAGAAGAGGCCCCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: SHVTLLPETRQVVDGEPMRLRAS*RRGPHS Trigger: AGAATGGGGGCCTCTTCTCCAAGAAGCCCGGAGCCT...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR GCA 90 bp | GTATCTGTGTTTATATGCACCATTCCATTGAAGGGTTCTGGTGGAGGTCCACATACCGAGGGGGAGGGCTaGTCCAAACACCAACTTGAT | + |
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Preference number: 4 (lower is better) Translates to: VSVFICTIPLKGSGGGPHTEGEG*SKHQLD Trigger: ATCAAGTTGGTGTTTGGAGCAGCCCTCCCCCTCGGT...ATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | TTCTTATCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAAGTGGCTGACATACCCTaGAGCAGCTTGGTAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: FLSHVTLLPETRQVVDGEVADIP*SSLVAP Trigger: CGGAGCTACCAAGCTGCTCCAGGGTATGTCAGCCAC...TTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGATAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGCAGCTGTTCTCCATCTaGTCCAGTGTGGCACTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SHVTLLPETRQVVDGEPMQLFSI*SSVALV Trigger: TACCAGTGCCACACTGGACCAGATGGAGAACAGCTG...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | GCACTGGTAAGTTACCACCGTTCCATTGTGAAAAGATGTTCTATTGTTGCTGTAGCGGCTGACACACCCTaGAGCAGCTTGGTAACTCTG | + |
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Preference number: 4 (lower is better) Translates to: ALVSYHRSIVKRCSIVAVAADTP*SSLVTL Trigger: CAGAGTTACCAAGCTGCTCCAGGGTGTGTCAGCCGC...TACAGCAACAATAGAACATCTTTTCACAATGGAACGGTGGTAACTTACCAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR TCA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGTGGTGGAGGTCCACATaGTTTTCGTCTACAGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: INWDRRTGKWKLLWGFTVWWRST*FSSTVV Trigger: GACAACTGTAGACGAAAATCATGTGGACCTCCACCA...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR TCA 90 bp | TTCTTATCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAAGCTGGTGCAATATATTaGCCGTTCTCCCACAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: FLSHVTLLPETRQVVDGEAGAIY*PFSHKL Trigger: GAGCTTGTGGGAGAACGGTCAATATATTGCACCAGC...TTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGATAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | GTATCTGTGTTTATATGCACCATTCCATTGAAGGGTTCTGGTGGAGGTCCACATCGTAGGACTGGCAAATaGAAACTGCTCTGGGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: VSVFICTIPLKGSGGGPHRRTGK*KLLWGF Trigger: AAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACG...ATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGAGTCTCCATTGGATATaGTTGGAGGTGGCTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: INWDRRTGKWKLLWGFTVSLHWI*LEVAHK Trigger: CTTGTGAGCCACCTCCAACCATATCCAATGGAGACT...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGTGTAGAAGTCTCCATTaGATATGGTTGGAGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SHVTLLPETRQVVDGEPMCRSLH*IWLEVA Trigger: AGCCACCTCCAACCATATCCAATGGAGACTTCTACA...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR TCA 90 bp | GCACTGGTAAGTTACCACCGTTCCATTGTGAAAAGATGTTCTATTGTTGCTGTATATGCACCATTCCATTaGAGGGTTCTGGTGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: ALVSYHRSIVKRCSIVAVYAPFH*RVLVEV Trigger: GACCTCCACCAGAACCCTTCAATGGAATGGTGCATA...TACAGCAACAATAGAACATCTTTTCACAATGGAACGGTGGTAACTTACCAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR TCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGTGTGACATTATTGCCTaGGACGAGACAAGTAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SHVTLLPETRQVVDGEPMCDIIA*DETSSR Trigger: TCTACTACTTGTCTCGTCTCAGGCAATAATGTCACA...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGGGATATGGTTGGAGGTaGCTCACAAGATATGATCTC | + |
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Preference number: 4 (lower is better) Translates to: INWDRRTGKWKLLWGFTVGYGWR*LTRYDL Trigger: GAGATCATATCTTGTGAGCCACCTCCAACCATATCC...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR TCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGACCACCGTTCCATTGTaGAAAGATGTTCTATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SHVTLLPETRQVVDGEPMTTVPL*KDVLLL Trigger: CAACAATAGAACATCTTTTCACAATGGAACGGTGGT...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGTCCATTGGATATGGTTaGAGGTGGCTCACAAGATAT | + |
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Preference number: 4 (lower is better) Translates to: INWDRRTGKWKLLWGFTVSIGYG*RWLTRY Trigger: ATATCTTGTGAGCCACCTCCAACCATATCCAATGGA...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| 3UTR CAA 72 bp | CCAAACTGTGTATCTGTGTTTATATGCACCATTCCATaGAAGGGTTCTGGTGGAGGTCCACATGATTTTCGT | + |
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Preference number: 4 (lower is better) Translates to: PNCVSVFICTIP*KGSGGGPHDFR Trigger: ACGAAAATCATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATACACAGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR TCA 90 bp | GCACTGGTAAGTTACCACCGTTCCATTGTGAAAAGATGTTCTATTGTTGCTGTACCTTCTTATCCCATGTaGCATTATTGCCTGAGACGA | + |
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Preference number: 4 (lower is better) Translates to: ALVSYHRSIVKRCSIVAVPSYPM*HYCLRR Trigger: TCGTCTCAGGCAATAATGTCACATGGGATAAGAAGG...TACAGCAACAATAGAACATCTTTTCACAATGGAACGGTGGTAACTTACCAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR GCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGGTATCTGTGTTTATATaGACCATTCCATTGAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SHVTLLPETRQVVDGEPMVSVFI*TIPLKG Trigger: ACCCTTCAATGGAATGGTGCATATAAACACAGATAC...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGCAAAGATGTCCCGACTaGAAACTCAAAGTCATTAAT | + |
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Preference number: 4 (lower is better) Translates to: SHVTLLPETRQVVDGEPMQRCPD*KLKVIN Trigger: ATTAATGACTTTGAGTTTCCAGTCGGGACATCTTTG...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | GGTCCACATGATTTTCGTCTACAGTTGTCTTCAACACTTGACCAGACCAAGTTTGAGACAAGTAGTAGATaGGGAACCAATGAGTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: GPHDFRLQLSSTLDQTKFETSSR*GTNESK Trigger: TTTCGACTCATTGGTTCCCCATCTACTACTTGTCTC...AAACTTGGTCTGGTCAAGTGTTGAAGACAACTGTAGACGAAAATCATGTGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR GCA 90 bp | GCACTGGTAAGTTACCACCGTTCCATTGTGAAAAGATGTTCTATTGTTGCTGTAGATCATCTTTGCTGGTaGAATATATTGACCGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ALVSYHRSIVKRCSIVAVDHLCW*NILTVL Trigger: GAGAACGGTCAATATATTGCACCAGCAAAGATGATC...TACAGCAACAATAGAACATCTTTTCACAATGGAACGGTGGTAACTTACCAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CCA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGTGCATTTTCAACTTCTaGAGCTGTGCATTTATTAGT | + |
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Preference number: 4 (lower is better) Translates to: INWDRRTGKWKLLWGFTVCIFNF*SCAFIS Trigger: ACTAATAAATGCACAGCTCCAGAAGTTGAAAATGCA...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CAA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGCAGGCTCCGGGCTTCTaGGAGAAGAGGCCCCCATTC | + |
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Preference number: 5 (lower is better) Translates to: INWDRRTGKWKLLWGFTVQAPGF*EKRPPF Trigger: GAATGGGGGCCTCTTCTCCAAGAAGCCCGGAGCCTG...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS TCA 90 bp | GTCTGGCACTGCACAGTGTGGGACCCTACCATGACAAACCCGGGCTaGCATCTAAATCTGATGATCTCAGTGAGGGTAAAGAAACTCCTG | + |
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Preference number: 5 (lower is better) Translates to: VWHCTVWDPTMTNPG*HLNLMISVRVKKLL Trigger: CAGGAGTTTCTTTACCCTCACTGAGATCATCAGATTTAGATGTCAGCCCGGGTTTGTCATGGTAGGGTCCCACACTGTGCAGTGCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000367049.9 ENST00000367051.6 ENST00000367052.6 ENST00000367053.6 ENST00000400960.7 |
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| CDS-3UTR CAA 90 bp | GGTCCACATGATTTTCGTCTACAGTTGTCTTCAACACTTGACCAGACCAAGTTTTTCTGGGGCATTGCATaGACCCCAGGCCACCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: GPHDFRLQLSSTLDQTKFFWGIA*TPGHRQ Trigger: CTGCCGGTGGCCTGGGGTCAATGCAATGCCCCAGAA...AAACTTGGTCTGGTCAAGTGTTGAAGACAACTGTAGACGAAAATCATGTGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS TCA 90 bp | AATAATGATCCAATTGGCTCCAGATTCCCTGGTCTGTACAGAAAATaGAGCCCTTTCCCACTAACAGGTAGCCGGGGTCACAAATGTAGC | + |
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Preference number: 5 (lower is better) Translates to: NNDPIGSRFPGLYRK*SPFPLTGSRGHKCS Trigger: GCTACATTTGTGACCCCGGCTACCTGTTAGTGGGAAAGGGCTTCATTTTCTGTACAGACCAGGGAATCTGGAGCCAATTGGATCATTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000367049.9 ENST00000367051.6 ENST00000367052.6 ENST00000367053.6 ENST00000400960.7 ENST00000529814.1 |
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| CDS-3UTR CAA 90 bp | GTATCTGTGTTTATATGCACCATTCCATTGAAGGGTTCTGGTGGAGGTCCACATCCCACAAGGAATTCGTaGACAAATTGGCGGCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: VSVFICTIPLKGSGGGPHPTRNS*TNWRLR Trigger: ACGAAGCCGCCAATTTGTCAACGAATTCCTTGTGGG...ATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CAA 90 bp | TCCCATGTGACATTATTGCCTGAGACGAGACAAGTAGTAGATGGGGAACCAATGTCCCATGTGACATTATaGCCTGAGACGAGACAAGTA | + |
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Preference number: 5 (lower is better) Translates to: SHVTLLPETRQVVDGEPMSHVTL*PETRQV Trigger: TACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA...CATTGGTTCCCCATCTACTACTTGTCTCGTCTCAGGCAATAATGTCACATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CAA 90 bp | GTATCTGTGTTTATATGCACCATTCCATTGAAGGGTTCTGGTGGAGGTCCACATCTCCATTGGATATGGTaGGAGGTGGCTCACAAGATA | + |
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Preference number: 5 (lower is better) Translates to: VSVFICTIPLKGSGGGPHLHWIW*EVAHKI Trigger: TATCTTGTGAGCCACCTCCAACCATATCCAATGGAG...ATGTGGACCTCCACCAGAACCCTTCAATGGAATGGTGCATATAAACACAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CAA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGTGCTGGTGCAATATATaGACCGTTCTCCCACAAGCT | + |
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Preference number: 5 (lower is better) Translates to: INWDRRTGKWKLLWGFTVCWCNI*TVLPQA Trigger: AGCTTGTGGGAGAACGGTCAATATATTGCACCAGCA...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CAA 90 bp | GGTCCACATGATTTTCGTCTACAGTTGTCTTCAACACTTGACCAGACCAAGTTTATATGCACCATTCCATaGAAGGGTTCTGGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: GPHDFRLQLSSTLDQTKFICTIP*KGSGGG Trigger: ACCTCCACCAGAACCCTTCAATGGAATGGTGCATAT...AAACTTGGTCTGGTCAAGTGTTGAAGACAACTGTAGACGAAAATCATGTGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CAA 90 bp | ATTAATTGGGATCGTAGGACTGGCAAATGGAAACTGCTCTGGGGTTTTACAGTGGATTTTCGTCTACAGTaGTCTTCAACACTTGACCAG | + |
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Preference number: 5 (lower is better) Translates to: INWDRRTGKWKLLWGFTVDFRLQ*SSTLDQ Trigger: CTGGTCAAGTGTTGAAGACAACTGTAGACGAAAATC...CACTGTAAAACCCCAGAGCAGTTTCCATTTGCCAGTCCTACGATCCCAATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS-3UTR CAA 90 bp | GGTCCACATGATTTTCGTCTACAGTTGTCTTCAACACTTGACCAGACCAAGTTTACTTGGACAAAAGATTaGTTCACACACTGGAACACT | + |
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Preference number: 5 (lower is better) Translates to: GPHDFRLQLSSTLDQTKFTWTKD*FTHWNT Trigger: AGTGTTCCAGTGTGTGAACAAATCTTTTGTCCAAGT...AAACTTGGTCTGGTCAAGTGTTGAAGACAACTGTAGACGAAAATCATGTGGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534202.5 |
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| CDS GCA 72 bp | GGCAGCTTGGGCCCCCATCTGCCATTGGTCTGGCACTaGACAGTGTGGGACCCTACCATGACAAACCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GSLGPHLPLVWH*TVWDPTMTNPG Trigger: GCCCGGGTTTGTCATGGTAGGGTCCCACACTGTGCAGTGCCAGACCAATGGCAGATGGGGGCCCAAGCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000367049.9 ENST00000367051.6 ENST00000367052.6 ENST00000367053.6 ENST00000400960.7 |
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| CDS TCA 72 bp | CCAATTGGCTCCAGATTCCCTGGTCTGTACAGAAAATaGAGCCCTTTCCCACTAACAGGTAGCCGGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PIGSRFPGLYRK*SPFPLTGSRGH Trigger: GTGACCCCGGCTACCTGTTAGTGGGAAAGGGCTTCATTTTCTGTACAGACCAGGGAATCTGGAGCCAATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000367049.9 ENST00000367051.6 ENST00000367052.6 ENST00000367053.6 ENST00000400960.7 ENST00000529814.1 |
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| CDS TCA 72 bp | TGCACAGTGTGGGACCCTACCATGACAAACCCGGGCTaGCATCTAAATCTGATGATCTCAGTGAGGGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: CTVWDPTMTNPG*HLNLMISVRVK Trigger: CTTTACCCTCACTGAGATCATCAGATTTAGATGTCAGCCCGGGTTTGTCATGGTAGGGTCCCACACTGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000367049.9 ENST00000367051.6 ENST00000367052.6 ENST00000367053.6 ENST00000400960.7 |
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| CDS TCA 72 bp | ACAGAGACACGAAGTCAACACACGCTGTTGGATAAATaGTGCCGACGAACATGCTTACACAGCGTTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: TETRSQHTLLDK*CRRTCLHSVPT Trigger: TGTGGGAACGCTGTGTAAGCATGTTCGTCGGCATCATTTATCCAACAGCGTGTGTTGACTTCGTGTCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000434033.5 ENST00000436595.1 ENST00000450439.5 |
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| CDS CAA 72 bp | TACTTTGTCAAGGAAGGACCCTGCTATTTTCTTCATTaGTTTGCAGAGTTCGGGGATGAACGCTGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: YFVKEGPCYFLH*FAEFGDERCCL Trigger: GAGGCAGCAGCGTTCATCCCCGAACTCTGCAAACAAATGAAGAAAATAGCAGGGTCCTTCCTTGACAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367049.9 ENST00000367051.6 ENST00000367052.6 ENST00000367053.6 ENST00000400960.7 |
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| CDS CAA 90 bp | CCGGAACAGAATTTTAAAAACTTCATTTGTGTTAAGCCACCCGTTTaGGAGTACTCTGTTACAGCAGCCCTAGCAAACTACTTGTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: PEQNFKNFICVKPPV*EYSVTAALANYLCY Trigger: ATAGCACAAGTAGTTTGCTAGGGCTGCTGTAACAGAGTACTCCAAAACGGGTGGCTTAACACAAATGAAGTTTTTAAAATTCTGTTCCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530487.5 |
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| CDS CAA 72 bp | AATTTTAAAAACTTCATTTGTGTTAAGCCACCCGTTTaGGAGTACTCTGTTACAGCAGCCCTAGCAAACTAC | + |
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Preference number: 6 (lower is better) Translates to: NFKNFICVKPPV*EYSVTAALANY Trigger: GTAGTTTGCTAGGGCTGCTGTAACAGAGTACTCCAAAACGGGTGGCTTAACACAAATGAAGTTTTTAAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530487.5 |
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| CDS CAA 72 bp | GAAGCTACAATTTACTTCTTTGCAATAATGATCCAATaGGCTCCAGATTCCCTGGTCTGTACAGAAAATGAA | + |
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Preference number: 6 (lower is better) Translates to: EATIYFFAIMIQ*APDSLVCTENE Trigger: TTCATTTTCTGTACAGACCAGGGAATCTGGAGCCAATTGGATCATTATTGCAAAGAAGTAAATTGTAGCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000367049.9 ENST00000367051.6 ENST00000367052.6 ENST00000367053.6 ENST00000400960.7 ENST00000529814.1 |
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