RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPXM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000121898

Ensembl transcript IDs: ENST00000241305.4, ENST00000368854.7, ENST00000481775.1, ENST00000615851.4

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTTGGGGGTTGTTTATGGACCCAGAATTTGTGCAAGAAGCTCCATaGTTGCTGCCCAACAAACTCCTGAATGATCTCAGCCTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: LWGLFMDPEFVQEAP*LLPNKLLNDLSLSL
Trigger: GAGAGAGAGGCTGAGATCATTCAGGAGTTTGTTGGGCAGCAAGCATGGAGCTTCTTGCACAAATTCTGGGTCCATAAACAACCCCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR TCA 90 bp GAAGATCTGGCATTCTACATATCAAAAATAACTCCCAGGCTGATATaGGGCCAACCCATGAGCACTCAATTCCACACAGGGGCAATACCT +
Preference number: 1 (lower is better)
Translates to: EDLAFYISKITPRLI*GQPMSTQFHTGAIP
Trigger: AGGTATTGCCCCTGTGTGGAATTGAGTGCTCATGGGTTGGCCTCATATCAGCCTGGGAGTTATTTTTGATATGTAGAATGCCAGATCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR GCA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCGGACCTGCCTCACAATaGACCCTCTCTTCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: STQFHTGAIPQAERGLQAGPASQ*TLSSRH
Trigger: GTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCC...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR CAA 90 bp CTCCCTACCTGGGGAACCTCCAGGGCTACTGGATCAGCAGGGACTTaGGGGGTTGTTTATGGACCCAGAATTTGTGCAAGAAGCTCCATG +
Preference number: 2 (lower is better)
Translates to: LPTWGTSRATGSAGT*GVVYGPRICARSSM
Trigger: CATGGAGCTTCTTGCACAAATTCTGGGTCCATAAACAACCCCCAAAGTCCCTGCTGATCCAGTAGCCCTGGAGGTTCCCCAGGTAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR CCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTAATTGCAAATGCACGTaGAACCCTTGCTGCCACGCA +
Preference number: 2 (lower is better)
Translates to: FHTGAIPQAERGLQATPLNCKCT*NPCCHA
Trigger: TGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATT...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR TCA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACACCCAGGTTGGCTTGCTaGGTTCTCTCACTCCCATCA +
Preference number: 2 (lower is better)
Translates to: NRGSTRILFYAARGSERTPRLAC*VLSLPS
Trigger: TGATGGGAGTGAGAGAACTCAGCAAGCCAACCTGGG...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR GCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTCAGGTTGGTTTAATTTaGATGGGTCCCAGACGAGTC +
Preference number: 2 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLQVGLI*MGPRRV
Trigger: GACTCGTCTGGGACCCATGCAAATTAAACCAACCTG...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR GCA 90 bp AGGCCACCCCACTTCTGGCTCTTTCCAGTCCTAGCAGGTAAAAGAGGAGATCCAGCCCAGCTGGGGAAATaGTGCAATTTTAGCTGTGCA +
Preference number: 2 (lower is better)
Translates to: RPPHFWLFPVLAGKRGDPAQLGK*CNFSCA
Trigger: TGCACAGCTAAAATTGCAGCATTTCCCCAGCTGGGC...TGGATCTCCTCTTTTACCTGCTAGGACTGGAAAGAGCCAGAAGTGGGGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR TCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTATGTGCACTTGGCAATaGCGCTATTGTCAAAAGAAC +
Preference number: 2 (lower is better)
Translates to: FHTGAIPQAERGLQATPLMCTWQ*RYCQKN
Trigger: GTTCTTTTGACAATAGCGTCATTGCCAAGTGCACAT...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR GCA 90 bp TTTAGCTGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGTTCCCTTTTGGGACCTaGCTCACAATGCACCCTCTC +
Preference number: 2 (lower is better)
Translates to: FSCANCKCTWNPCCHANRFPFGT*LTMHPL
Trigger: GAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA...CCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACAGCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR GCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTTCAGCTTTTCTCTGCTaGTCTGTCCAAGTTATTTGG +
Preference number: 2 (lower is better)
Translates to: FHTGAIPQAERGLQATPLSAFLC*SVQVIW
Trigger: CCAAATAACTTGGACAGAGCAGCAGAGAAAAGCTGA...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR CAA 90 bp TGGGGGTTGTTTATGGACCCAGAATTTGTGCAAGAAGCTCCATGCTaGCTGCCCAACAAACTCCTGAATGATCTCAGCCTCTCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: WGLFMDPEFVQEAPC*LPNKLLNDLSLSLL
Trigger: AAGGAGAGAGAGGCTGAGATCATTCAGGAGTTTGTTGGGCAGCAAGCATGGAGCTTCTTGCACAAATTCTGGGTCCATAAACAACCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR GCA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCTGTGCAAATTGCAAATaGACGTGGAACCCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: WILLGRLGASQMVTFGTACANCK*TWNPCC
Trigger: GCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR CCA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGAGCTACTACCAGGTTaGTTTAATTTGCATGGGTCC +
Preference number: 2 (lower is better)
Translates to: NRGSTRILFYAARGSERTELLPG*FNLHGS
Trigger: GGACCCATGCAAATTAAACCAACCTGGTAGTAGCTC...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR TCA 90 bp AGATTCAAGAGGCTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAATTCTCCTTCTCTCTCTaGTTCCCAGGTTGGCTTGCT +
Preference number: 2 (lower is better)
Translates to: RFKRLTDVHLAMTLLSKEFSFSL*FPGWLA
Trigger: AGCAAGCCAACCTGGGAATCAGAGAGAGAAGGAGAA...TTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR GCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAAACGTGGAACCCTTGCTaGCACGCAAACAGGGGAAGC +
Preference number: 2 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQTWNPC*HANRGS
Trigger: GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGT...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR CCA 90 bp AGATTCAAGAGGCTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAATCAAATGGTAACATTTaGGACAGCCCAGCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: RFKRLTDVHLAMTLLSKESNGNI*DSPAGE
Trigger: TTCCCCAGCTGGGCTGTCCCAAATGTTACCATTTGA...TTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR TCA 90 bp CTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAACACAGAATTTATCAGAGGAAACAACAGTaGGTGAGTCCACTATGGAGC +
Preference number: 2 (lower is better)
Translates to: LTDVHLAMTLLSKEHRIYQRKQQ*VSPLWS
Trigger: GCTCCATAGTGGACTCACTCACTGTTGTTTCCTCTG...ATAAATTCTGTGTTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR TCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAAGGAAACAACAGTGAGTaGGTCCACTATGGAGCTACT +
Preference number: 2 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQGNNSE*VHYGAT
Trigger: AGTAGCTCCATAGTGGACTCACTCACTGTTGTTTCC...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR CAA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCGGATCAGCAGGGACTTaGGGGGTTGTTTATGGACCC +
Preference number: 3 (lower is better)
Translates to: STQFHTGAIPQAERGLQAGSAGT*GVVYGP
Trigger: GGGTCCATAAACAACCCCCAAAGTCCCTGCTGATCC...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR CCA 72 bp CTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTCTaGCTCTTTCCAGTCCTAGCAGGTAAAAGAGGAGAT +
Preference number: 3 (lower is better)
Translates to: LKQREGFRPPHF*LFPVLAGKRGD
Trigger: ATCTCCTCTTTTACCTGCTAGGACTGGAAAGAGCCAGAAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR CAA 90 bp TTTAGCTGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGCTCCAGCCTTCCCTTTaGGGACCTGCCTCACAATGC +
Preference number: 3 (lower is better)
Translates to: FSCANCKCTWNPCCHANRLQPSL*GPASQC
Trigger: GCATTGTGAGGCAGGTCCCAAAAGGGAAGGCTGGAG...CCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACAGCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR TCA 72 bp CTTCTCCTTCTCTCTCTGATTCCCAGGTTGGCTTGCTaGGTTCTCTCACTCCCATCAGCTTTTCTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: LLLLSLIPRLAC*VLSLPSAFLCC
Trigger: GCAGCAGAGAAAAGCTGATGGGAGTGAGAGAACTCAGCAAGCCAACCTGGGAATCAGAGAGAGAAGGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR GCA 72 bp AGCTGTGCAAATTGCAAATGCACGTGGAACCCTTGCTaGCACGCAAACAGGGGAAGCACCAGAATCCTTTTC +
Preference number: 3 (lower is better)
Translates to: SCANCKCTWNPC*HANRGSTRILF
Trigger: GAAAAGGATTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR CCA 72 bp GGCTACTGGATCAGCAGGGACTTTGGGGGTTGTTTATaGACCCAGAATTTGTGCAAGAAGCTCCATGCTTGC +
Preference number: 3 (lower is better)
Translates to: GYWISRDFGGCL*TQNLCKKLHAC
Trigger: GCAAGCATGGAGCTTCTTGCACAAATTCTGGGTCCATAAACAACCCCCAAAGTCCCTGCTGATCCAGTAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR CAA 90 bp AGATTCAAGAGGCTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAAATGCACGTGGAACCCTaGCTGCCACGCAAACAGGGG +
Preference number: 3 (lower is better)
Translates to: RFKRLTDVHLAMTLLSKEMHVEP*LPRKQG
Trigger: CCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCAT...TTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR CCA 72 bp ACAGTGAGTGAGTCCACTATGGAGCTACTACCAGGTTaGTTTAATTTGCATGGGTCCCAGACGAGTCTCAAG +
Preference number: 3 (lower is better)
Translates to: TVSESTMELLPG*FNLHGSQTSLK
Trigger: CTTGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTCACTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR CAA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACATCTTCCAGGCACTTCTaGAATTACAGAGGAAACAAC +
Preference number: 3 (lower is better)
Translates to: NRGSTRILFYAARGSERTSSRHF*NYRGNN
Trigger: GTTGTTTCCTCTGTAATTCAAGAAGTGCCTGGAAGA...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR TCA 72 bp TTCCAGGCACTTCTTGAATTACAGAGGAAACAACAGTaGGTGAGTCCACTATGGAGCTACTACCAGGTTGGT +
Preference number: 3 (lower is better)
Translates to: FQALLELQRKQQ*VSPLWSYYQVG
Trigger: ACCAACCTGGTAGTAGCTCCATAGTGGACTCACTCACTGTTGTTTCCTCTGTAATTCAAGAAGTGCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR GCA 72 bp TTGTTTATGGACCCAGAATTTGTGCAAGAAGCTCCATaGTTGCTGCCCAACAAACTCCTGAATGATCTCAGC +
Preference number: 3 (lower is better)
Translates to: LFMDPEFVQEAP*LLPNKLLNDLS
Trigger: GCTGAGATCATTCAGGAGTTTGTTGGGCAGCAAGCATGGAGCTTCTTGCACAAATTCTGGGTCCATAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR-3UTR CAA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAAGATTCCCAGGTTGGCTaGCTGAGTTCTCTCACTCCC +
Preference number: 3 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQDSQVG*LSSLTP
Trigger: GGGAGTGAGAGAACTCAGCAAGCCAACCTGGGAATC...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR TCA 72 bp ACAGATTCAAGAGGCTCACTGATGTGCACTTGGCAATaGCGCTATTGTCAAAAGAACACAGAATTTATTTGT +
Preference number: 3 (lower is better)
Translates to: TDSRGSLMCTWQ*RYCQKNTEFIC
Trigger: ACAAATAAATTCTGTGTTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTACCAGCTCGCCGCCCTaGAGGTTGCCGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: FHTGAIPQAERGLQATPLTSSPP*RLPPST
Trigger: TGTGCTGGGCGGCAACCTGCAGGGCGGCGAGCTGGT...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTAGGGAGGGGAGGACGTaGATCCGCGTCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FHTGAIPQAERGLQATPLREGRT*IRVSST
Trigger: GGTGGAGGAGACGCGGATTCACGTCCTCCCCTCCCT...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTGCCAGGAGGCCCCATTaGCAGTGCCCTCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FHTGAIPQAERGLQATPLARRPH*QCPPPS
Trigger: AGAAGGAGGAGGGCACTGTCAATGGGGCCTCCTGGC...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTGTGGGGGTGTGTTCCTaGGTCTTCCAGGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLVGVCS*VFQGDR
Trigger: GCGGTCCCCCTGGAAGACGCAGGAACACACCCCCAC...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCTGCCCGCCTGGATGTTaGGTCTCCCTCGATGTGCCC +
Preference number: 4 (lower is better)
Translates to: STQFHTGAIPQAERGLQACPPGC*VSLDVP
Trigger: GGGCACATCGAGGGAGACTCAACATCCAGGCGGGCA...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCGCTGTCGTCTCTTCTaGCCCCGCAGCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GTLAATQTGEAPESFSMQRCRLF*PRSFSR
Trigger: GCGGCTGAAGCTGCGGGGGCAGAAGAGACGACAGCG...CTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCTTCAGCCGCCTGGCTaGCAGGCTGACGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTLAATQTGEAPESFSMQLQPPG*QADGLL
Trigger: AAGCAGCCCGTCAGCCTGCCAGCCAGGCGGCTGAAG...CTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTGCCCTTCAGGAAGGCTaGCACCTCTGGCTCTCCCTA +
Preference number: 4 (lower is better)
Translates to: FHTGAIPQAERGLQATPLALQEG*HLWLSL
Trigger: TAGGGAGAGCCAGAGGTGCCAGCCTTCCTGAAGGGC...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACATGCAGCCAGAGGCTCTaGACGGACAGGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: NRGSTRILFYAARGSERTCSQRL*TDRLPS
Trigger: GGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCA...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCCAGCTGGGGAAAGAGTCTCCCTCGATGTaGCCCCAGGCCATAGCGCTT +
Preference number: 4 (lower is better)
Translates to: GRLGASQMVTFGTAQLGKESPSM*PQAIAL
Trigger: AAGCGCTATGGCCTGGGGGCACATCGAGGGAGACTC...TTTCCCCAGCTGGGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp ATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAACCACCAGGTGGACGATaGGCGCATTCCGGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: IANARGTLAATQTGEAPEPPGGR*AHSGPS
Trigger: ACTTGGCCCGGAATGCGCGCATCGTCCACCTGGTGG...TTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGCTTGGTGGCCCTCTTaGGCGGCCTGGGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: SPLWSYYQVGLICMGPRRAWWPS*AAWAPA
Trigger: CGCAGGAGCCCAGGCCGCCCAAGAGGGCCACCAAGC...TCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTGTGCCCTCCTCCTTCTaGAAGTCCTCCGTGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLVPSSF*KSSVWH
Trigger: GTGCCACACGGAGGACTTCCAGAAGGAGGAGGGCAC...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCCGGGCCAAGTACTCCTaGCACACGAACTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: CANCKCTWNPCCHANRGSRAKYS*HTNCTS
Trigger: GCTGGTGCAGTTCGTGTGTCAGGAGTACTTGGCCCG...GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TTTAGCTGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGCCTGGCTGGCAGGCTaGCGGGCTGCTTCCCAAACT +
Preference number: 4 (lower is better)
Translates to: FSCANCKCTWNPCCHANRAWLAG*RAASQT
Trigger: AGTTTGGGAAGCAGCCCGTCAGCCTGCCAGCCAGGC...CCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACAGCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTACGTGGAACCCTTGCTaGCACGCAAACAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLTWNPC*HANRGS
Trigger: GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGT...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAAGAGCTTTCTTGGGCTTaGTGGCCCTCTTGGGCGGCC +
Preference number: 4 (lower is better)
Translates to: FPFGTCLTMHPLFQALLEELSWA*WPSWAA
Trigger: GGCCGCCCAAGAGGGCCACCAAGCCCAAGAAAGCTC...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTTAGCTGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGTGGAAGTCCTCCGTGTaGCACACCCTCCTCCGGGCG +
Preference number: 4 (lower is better)
Translates to: FSCANCKCTWNPCCHANRWKSSV*HTLLRA
Trigger: CGCCCGGAGGAGGGTGTGCCACACGGAGGACTTCCA...CCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACAGCTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTTTTCCATCCAGGCTATaGCTGCTCTGGTCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLFPSRL*LLWSRQ
Trigger: CTGCCGAGACCAGAGCAGTCATAGCCTGGATGGAAA...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp GAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTTCGGCCTTTGCTGTaGCCACATACTCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: EAPESFSMQPEALNGQAPLRPLL*PHTLQG
Trigger: ACCCTGGAGAGTATGTGGTCACAGCAAAGGCCGAAG...GGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCCCCAGGTTGGCTTGCTaGGTTCTCTCACTCCCATCA +
Preference number: 4 (lower is better)
Translates to: STQFHTGAIPQAERGLQAPRLAC*VLSLPS
Trigger: TGATGGGAGTGAGAGAACTCAGCAAGCCAACCTGGG...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp CTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCACGCCGCCCTGCAGGTTaGCGCCCAGCACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LWSYYQVGLICMGPRRVSRRPAG*RPAQKG
Trigger: TCCCTTTTGTGCTGGGCGGCAACCTGCAGGGCGGCG...TGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp AGGCCACCCCACTTCTGGCTCTTTCCAGTCCTAGCAGGTAAAAGAGGAGATCCAGGCAGGCTGACGGGCTaGTTCCCAAACTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: RPPHFWLFPVLAGKRGDPGRLTG*FPNFSM
Trigger: CATGGAGAAGTTTGGGAAGCAGCCCGTCAGCCTGCC...TGGATCTCCTCTTTTACCTGCTAGGACTGGAAAGAGCCAGAAGTGGGGTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAATTACAGACTTTCTTGGGCTTGGTaGCCCTCTTGGGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGPASQCTLSSRHFLNYRLSWAW*PSWAAW
Trigger: CCAGGCCGCCCAAGAGGGCCACCAAGCCCAAGAAAG...TCTGTAATTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GAGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGGTCTCCTCCACCAGGTaGACGATGCGCGCATTCCGG +
Preference number: 4 (lower is better)
Translates to: ESTMELLPGWFNLHGSQTVSSTR*TMRAFR
Trigger: CCGGAATGCGCGCATCGTCCACCTGGTGGAGGAGAC...CGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGACGTGGTCGTCGGGGGTaGGGGTGTGTTCCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: SPLWSYYQVGLICMGPRRRGRRG*GCVPAS
Trigger: AGACGCAGGAACACACCCCCACCCCCGACGACCACG...TCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTCACTCCTCGGGCAGCTaGCTCTCATGTGGGTATTTA +
Preference number: 4 (lower is better)
Translates to: FHTGAIPQAERGLQATPLHSSGS*LSCGYL
Trigger: TAAATACCCACATGAGAGCCAGCTGCCCGAGGAGTG...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAAGTGGGCAACTCTCTCTaGCATCTTCACGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: FPFGTCLTMHPLFQALLEVGNSL*HLHGPH
Trigger: GTGTGGCCCGTGAAGATGTCAGAGAGAGTTGCCCAC...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp GAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCGGACGGGTAGCTCATTaGGAACAGGGATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EAPESFSMQPEALNGQAPGRVAH*EQGSPS
Trigger: AGAAGGAGATCCCTGTTCTCAATGAGCTACCCGTCC...GGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACACATCCAGGCTATGACTaGTCTGGTCTCGGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NRGSTRILFYAARGSERTHPGYD*SGLGSH
Trigger: GTGGCTGCCGAGACCAGAGCAGTCATAGCCTGGATG...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp CTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCAGCTGTGTTTACCTGGTaGAGGCGGCTCCGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: LWSYYQVGLICMGPRRVSAVFTW*RRLRSR
Trigger: TCGGCTCCGGAGCCGCCTCCACCAGGTAAACACAGC...TGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCCATAGCGCTTCACCGTaGAGGCATGGAGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: CANCKCTWNPCCHANRGSHSASP*RHGAGS
Trigger: ACTTCCAGCTCCATGCCTCCACGGTGAAGCGCTATG...GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTACAGTGACCCACGTGTaGCTGTCATTGCTCACCATG +
Preference number: 4 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLTVTHV*LSLLTM
Trigger: CATGGTGAGCAATGACAGCCACACGTGGGTCACTGT...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCATGTCAATTCCATCGTaGGTCCAGCGTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CANCKCTWNPCCHANRGSMSIPS*VQRPRD
Trigger: GTCCCTGGGACGCTGGACCCACGATGGAATTGACAT...GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCTCTCGGCAGCCACCGTaGCATTTTCCGACAGAAACC +
Preference number: 4 (lower is better)
Translates to: CANCKCTWNPCCHANRGSSRQPP*HFPTET
Trigger: GGTTTCTGTCGGAAAATGCCACGGTGGCTGCCGAGA...GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAACAGGGCCAGAGAGGGTaGATTCTCTTAGGACGCCTG +
Preference number: 4 (lower is better)
Translates to: FPFGTCLTMHPLFQALLEQGQRG*ILLGRL
Trigger: CAGGCGTCCTAAGAGAATCCACCCTCTCTGGCCCTG...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TTTAGCTGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGCCACACGGACACTGTaGTCATCGTTGGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: FSCANCKCTWNPCCHANRATRTL*SSLAAF
Trigger: GAAGGCTGCCAACGATGATCACAGTGTCCGTGTGGC...CCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACAGCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GAGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGTGCACGTGGAACCCTTaGTGCCACGCAAACAGGGGA +
Preference number: 4 (lower is better)
Translates to: ESTMELLPGWFNLHGSQTCTWNP*CHANRG
Trigger: TCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCA...CGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCCAGCTGGGGAAACAGCTGGCTCTCATGTaGGTATTTATCACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GRLGASQMVTFGTAQLGKQLALM*VFITAH
Trigger: GTGGGCTGTGATAAATACCCACATGAGAGCCAGCTG...TTTCCCCAGCTGGGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTAGTAATCCCCATCGTTaGCTGTTCGGATGTCATGGT +
Preference number: 4 (lower is better)
Translates to: FHTGAIPQAERGLQATPLSNPHR*LFGCHG
Trigger: ACCATGACATCCGAACAGCCAACGATGGGGATTACT...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGACTGGCTCTCCCTACCTaGGGAACCTCCAGGGCTACT +
Preference number: 4 (lower is better)
Translates to: SPLWSYYQVGLICMGPRRLALPT*GTSRAT
Trigger: AGTAGCCCTGGAGGTTCCCCAGGTAGGGAGAGCCAG...TCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCTGTCATTGCTCACCATaGCCTTATAGGATGTCACCC +
Preference number: 4 (lower is better)
Translates to: STQFHTGAIPQAERGLQACHCSP*PYRMSP
Trigger: GGGTGACATCCTATAAGGTCATGGTGAGCAATGACA...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCCCTTTAATGCCACGATaGACCTGCTCCATGAACACG +
Preference number: 4 (lower is better)
Translates to: CANCKCTWNPCCHANRGSPLMPR*TCSMNT
Trigger: CGTGTTCATGGAGCAGGTTCATCGTGGCATTAAAGG...GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCCAGAGGAAACAACAGTaGGTGAGTCCACTATGGAGC +
Preference number: 4 (lower is better)
Translates to: CANCKCTWNPCCHANRGSQRKQQ*VSPLWS
Trigger: GCTCCATAGTGGACTCACTCACTGTTGTTTCCTCTG...GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGGCCACCCCACTTCTGGCTCTTTCCAGTCCTAGCAGGTAAAAGAGGAGATCCATATGAGGCCAACCCATaGGCACTCAATTCCACACAG +
Preference number: 4 (lower is better)
Translates to: RPPHFWLFPVLAGKRGDPYEANP*ALNSTQ
Trigger: CTGTGTGGAATTGAGTGCTCATGGGTTGGCCTCATA...TGGATCTCCTCTTTTACCTGCTAGGACTGGAAAGAGCCAGAAGTGGGGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACAGTTCTTGGTGGATaGAGTGAAACCTTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: STQFHTGAIPQAERGLQATVLGG*SETFGL
Trigger: AAGGCCGAAGGTTTCACTGCATCCACCAAGAACTGT...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp AGGCCACCCCACTTCTGGCTCTTTCCAGTCCTAGCAGGTAAAAGAGGAGATCCAGTGCAAGAAGCTCCATaGTTGCTGCCCAACAAACTC +
Preference number: 4 (lower is better)
Translates to: RPPHFWLFPVLAGKRGDPVQEAP*LLPNKL
Trigger: GAGTTTGTTGGGCAGCAAGCATGGAGCTTCTTGCAC...TGGATCTCCTCTTTTACCTGCTAGGACTGGAAAGAGCCAGAAGTGGGGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GAGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGTCTTGGGAGCTTTCTTaGGCTTGGTGGCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ESTMELLPGWFNLHGSQTSWELS*AWWPSW
Trigger: CCAAGAGGGCCACCAAGCCCAAGAAAGCTCCCAAGA...CGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp ATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAACACTGTGATCATCGTTaGCAGCCTTCTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: IANARGTLAATQTGEAPEHCDHR*QPSQSS
Trigger: AGAGCTCTGAGAAGGCTGCCAACGATGATCACAGTG...TTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AGGCCACCCCACTTCTGGCTCTTTCCAGTCCTAGCAGGTAAAAGAGGAGATCCATTCCAGACCAAGAGGTaGGCAACTCTCTCTGACATC +
Preference number: 4 (lower is better)
Translates to: RPPHFWLFPVLAGKRGDPFQTKR*ATLSDI
Trigger: GATGTCAGAGAGAGTTGCCCACCTCTTGGTCTGGAA...TGGATCTCCTCTTTTACCTGCTAGGACTGGAAAGAGCCAGAAGTGGGGTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAAAATCCAGGTCATCAGTaGTGGTCATCTCGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: FPFGTCLTMHPLFQALLENPGHQ*WSSRSG
Trigger: GCCGGAACGAGATGACCACCACTGATGACCTGGATT...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCCAGCTGGGGAAAGATTGGGAACTTTCCTaGGGACATTCTGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: GRLGASQMVTFGTAQLGKDWELS*GHSVDP
Trigger: AGGATCGACAGAATGTCCCCAGGAAAGTTCCCAATC...TTTCCCCAGCTGGGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCACAGCCCACGTAGATaGACAGTTCGAAGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GTLAATQTGEAPESFSMQHSPRR*TVRSSL
Trigger: CAAACTGCTTCGAACTGTCCATCTACGTGGGCTGTG...CTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGACTCCCCAGGGTGATCTaGGATCTCCACAGCATACAG +
Preference number: 4 (lower is better)
Translates to: SPLWSYYQVGLICMGPRRLPRVI*DLHSIQ
Trigger: CTGTATGCTGTGGAGATCTCAGATCACCCTGGGGAG...TCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCCAGGAAAGTTGTTGTTaGTGTCAATTCCATCGTGGG +
Preference number: 4 (lower is better)
Translates to: STQFHTGAIPQAERGLQAQESCC*CQFHRG
Trigger: CCCACGATGGAATTGACATCAACAACAACTTTCCTG...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGATTCAAGAGGCTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAATCCGGGCGTCTGTCATaGGGCGGTGTGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RFKRLTDVHLAMTLLSKESGRLS*GGVWRH
Trigger: ATGCCTCCACACACCGCCTCATGACAGACGCCCGGA...TTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp ATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAAGGAAACAACAGTGAGTaGGTCCACTATGGAGCTACT +
Preference number: 4 (lower is better)
Translates to: IANARGTLAATQTGEAPEGNNSE*VHYGAT
Trigger: AGTAGCTCCATAGTGGACTCACTCACTGTTGTTTCC...TTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACATTCTCCTTCTCTCTCTaGTTCCCAGGTTGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NRGSTRILFYAARGSERTFSFSL*FPGWLA
Trigger: AGCAAGCCAACCTGGGAATCAGAGAGAGAAGGAGAA...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAATGCCCAACAAACTCCTaGATGATCTCAGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FPFGTCLTMHPLFQALLECPTNS*MISASL
Trigger: GAGAGAGGCTGAGATCATTCAGGAGTTTGTTGGGCA...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAACTCCCAGGCTGATATaGGGCCAACCCATGAGCACT +
Preference number: 4 (lower is better)
Translates to: SPLWSYYQVGLICMGPRRTPRLI*GQPMST
Trigger: AGTGCTCATGGGTTGGCCTCATATCAGCCTGGGAGT...TCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAAAGGGTCCTCGAGGGCTaGGCCCTGGGCTCCGACCCC +
Preference number: 4 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQRVLEG*ALGSDP
Trigger: GGGGTCGGAGCCCAGGGCGCAGCCCTCGAGGACCCT...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp TGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCCAGGTTGGTTTAATTTaGATGGGTCCCAGACGAGTC +
Preference number: 4 (lower is better)
Translates to: CANCKCTWNPCCHANRGSQVGLI*MGPRRV
Trigger: GACTCGTCTGGGACCCATGCAAATTAAACCAACCTG...GCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCTTCCCTTTTGGGACCTaGCTCACAATGCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: WILLGRLGASQMVTFGTAFPFGT*LTMHPL
Trigger: GAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGCCCAGCTGGGGAAATaGTGCAATTTTAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: NRGSTRILFYAARGSERTAQLGK*CNFSCA
Trigger: TGCACAGCTAAAATTGCAGCATTTCCCCAGCTGGGC...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAACTTCAATCCACTGCTaGAGGTCATTTCTTCCCGCG +
Preference number: 4 (lower is better)
Translates to: NRGSTRILFYAARGSERTTSIHC*RSFLPA
Trigger: CGCGGGAAGAAATGACCTCCAGCAGTGGATTGAAGT...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCGAGCTACTACCAGGTTaGTTTAATTTGCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: STQFHTGAIPQAERGLQAELLPG*FNLHGS
Trigger: GGACCCATGCAAATTAAACCAACCTGGTAGTAGCTC...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAAACCTCCAGGGCTACTaGATCAGCAGGGACTTTGGG +
Preference number: 4 (lower is better)
Translates to: SPLWSYYQVGLICMGPRRNLQGY*ISRDFG
Trigger: CCCAAAGTCCCTGCTGATCCAGTAGCCCTGGAGGTT...TCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTTTGTATGAAGGTAGCTaGAATCGTTCAGACTTCCAG +
Preference number: 4 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLLYEGS*NRSDFQ
Trigger: CTGGAAGTCTGAACGATTTCAGCTACCTTCATACAA...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp GAGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGGATGAACCTGCTCCATaGACACGATCAGAGATTCCC +
Preference number: 4 (lower is better)
Translates to: ESTMELLPGWFNLHGSQTDEPAP*TRSEIP
Trigger: GGGAATCTCTGATCGTGTTCATGGAGCAGGTTCATC...CGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGATCCCAAACTTCTCCATaGTCTCTCGGATCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SPLWSYYQVGLICMGPRRSQTSP*SLGSWP
Trigger: TGGCCAGGATCCGAGAGATCATGGAGAAGTTTGGGA...TCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTTTTTTCCCAGGTCAATaGGGCAGCAACATTAACAAA +
Preference number: 4 (lower is better)
Translates to: FHTGAIPQAERGLQATPLFFPGQ*GSNINK
Trigger: TTTGTTAATGTTGCTGCCTCATTGACCTGGGAAAAA...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAACCCGGCCAGGGTCACTaGCAGGAGCACCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQPGQGH*QEHQGQ
Trigger: CTGGCCCTGGTGCTCCTGGCAGTGACCCTGGCCGGG...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCCAGCTGGGGAAACCATCAGCTTTTCTCTaGTGCTCTGTCCAAGTTATT +
Preference number: 4 (lower is better)
Translates to: GRLGASQMVTFGTAQLGKPSAFL*CSVQVI
Trigger: AATAACTTGGACAGAGCAGCAGAGAAAAGCTGATGG...TTTCCCCAGCTGGGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAATGTGCAAATTGCAAATaGACGTGGAACCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPFGTCLTMHPLFQALLECANCK*TWNPCC
Trigger: GCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACA...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTTTTAGCTGTGCAAATTaGAAATGCACGTGGAACCCT +
Preference number: 4 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLFSCAN*KCTWNP
Trigger: AGGGTTCCACGTGCATTTGCAATTTGCACAGCTAAA...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GAGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGTTCACCGTGGAGGCATaGAGCTGGAAGTCTGTGATT +
Preference number: 4 (lower is better)
Translates to: ESTMELLPGWFNLHGSQTFTVEA*SWKSVI
Trigger: AATCACAGACTTCCAGCTCCATGCCTCCACGGTGAA...CGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCTCATTAATGCCCGCCTaGATGTTGAGTCTCCCTCGA +
Preference number: 4 (lower is better)
Translates to: WILLGRLGASQMVTFGTASLMPA*MLSLPR
Trigger: TCGAGGGAGACTCAACATCCAGGCGGGCATTAATGA...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp CAAAAGAACACAGAATTTATTTGTAGCAGCTTGCAATGTCCCAGGGCCAGAGAGCCAGGTCATCAGTGGTaGTCATCTCGTTCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: QKNTEFICSSLQCPRAREPGHQW*SSRSGG
Trigger: ACCGCCGGAACGAGATGACCACCACTGATGACCTGG...CTCTCTGGCCCTGGGACATTGCAAGCTGCTACAAATAAATTCTGTGTTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR CAA 72 bp AGCAGGGACTTTGGGGGTTGTTTATGGACCCAGAATTaGTGCAAGAAGCTCCATGCTTGCTGCCCAACAAAC +
Preference number: 4 (lower is better)
Translates to: SRDFGGCLWTQN*CKKLHACCPTN
Trigger: GTTTGTTGGGCAGCAAGCATGGAGCTTCTTGCACAAATTCTGGGTCCATAAACAACCCCCAAAGTCCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCATTCAAGAGGCTCACTaGTGTGCACTTGGCAATGAC +
Preference number: 4 (lower is better)
Translates to: WILLGRLGASQMVTFGTAIQEAH*CALGND
Trigger: GTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAAT...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp CAAAAGAACACAGAATTTATTTGTAGCAGCTTGCAATGTCCCAGGGCCAGAGAGAGGACTGAGGGTTTATaGGGATGTAGCGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QKNTEFICSSLQCPRARERTEGL*GCSGPP
Trigger: TGGTGGCCCGCTACATCCGCATAAACCCTCAGTCCT...CTCTCTGGCCCTGGGACATTGCAAGCTGCTACAAATAAATTCTGTGTTCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAAGGCCCAGCACCTCATTaGCGTGGGCCCCCGCGATGT +
Preference number: 4 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQGPAPH*RGPPRC
Trigger: ACATCGCGGGGGCCCACGGCAATGAGGTGCTGGGCC...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCTGGACCCAGAATTTGTaGAAGAAGCTCCATGCTTGC +
Preference number: 4 (lower is better)
Translates to: WILLGRLGASQMVTFGTAWTQNL*KKLHAC
Trigger: GCAAGCATGGAGCTTCTTGCACAAATTCTGGGTCCA...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAAATAATTATTAGGATCTaGCAGTGGGCAGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FPFGTCLTMHPLFQALLEIIIRI*QWAAQD
Trigger: ATCCTGGGCTGCCCACTGCCAGATCCTAATAATTAT...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp TCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCTTCTCCTTTTGCAATATAGTGATTaGGAACTTTCCTGGGGACAT +
Preference number: 4 (lower is better)
Translates to: SFSMQPEALNGQAPLLLLLQYSD*ELSWGH
Trigger: ATGTCCCCAGGAAAGTTCCCAATCACTATATTGCAA...AAGGAGAAGGAGGGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp CTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCAGATCAGCAGGGACTTTaGGGGTTGTTTATGGACCCA +
Preference number: 4 (lower is better)
Translates to: LWSYYQVGLICMGPRRVSDQQGL*GLFMDP
Trigger: TGGGTCCATAAACAACCCCCAAAGTCCCTGCTGATC...TGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp GAGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGGGAGCTGGAAGTCTGTaGTTTTTAAGGTTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: ESTMELLPGWFNLHGSQTGAGSL*FLRFPD
Trigger: GTCTGGAAACCTTAAAAATCACAGACTTCCAGCTCC...CGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGATCTCCATTCTCATaGAGATGCTCCCATTATCAA +
Preference number: 4 (lower is better)
Translates to: NRGSTRILFYAARGSERTGSPFS*RCSHYQ
Trigger: TTGATAATGGGAGCATCTGCATGAGAATGGAGATCC...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp CTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAACACAGAATTTATCTTCCAGCGACGGTGTaGCAGGAGGCCCCATTGACA +
Preference number: 4 (lower is better)
Translates to: LTDVHLAMTLLSKEHRIYLPATV*QEAPLT
Trigger: TGTCAATGGGGCCTCCTGGCACACCGTCGCTGGAAG...ATAAATTCTGTGTTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp CTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCATTATTTGTAGCAGCTTaGAATGTCCCAGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LWSYYQVGLICMGPRRVSLFVAA*NVPGPE
Trigger: CTCTGGCCCTGGGACATTGCAAGCTGCTACAAATAA...TGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp CTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAACACAGAATTTATGTTGCTGTGTTTACCTaGTGGAGGCGGCTCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LTDVHLAMTLLSKEHRIYVAVFT*WRRLRS
Trigger: GCTCCGGAGCCGCCTCCACCAGGTAAACACAGCAAC...ATAAATTCTGTGTTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAATCCTTTTCTATGCAGACATTTAGCCTAATCTaGAAGATCTGGCATTCTACA +
Preference number: 4 (lower is better)
Translates to: GTLAATQTGEAPESFSMQTFSLI*KIWHST
Trigger: TGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGT...CTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
3UTR CAA 72 bp TTTATGGACCCAGAATTTGTGCAAGAAGCTCCATGCTaGCTGCCCAACAAACTCCTGAATGATCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FMDPEFVQEAPC*LPNKLLNDLSL
Trigger: GAGGCTGAGATCATTCAGGAGTTTGTTGGGCAGCAAGCATGGAGCTTCTTGCACAAATTCTGGGTCCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp CTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCACTCTCTCTCCTTTTCTaGACACACTCCTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LWSYYQVGLICMGPRRVSLSLLF*THSFVE
Trigger: TTCAACAAAGGAGTGTGTTCAGAAAAGGAGAGAGAG...TGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp CTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCATCAGCTTTTCTCTGCTaGTCTGTCCAAGTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LWSYYQVGLICMGPRRVSSAFLC*SVQVIW
Trigger: CCAAATAACTTGGACAGAGCAGCAGAGAAAAGCTGA...TGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp CAAAAGAACACAGAATTTATTTGTAGCAGCTTGCAATGTCCCAGGGCCAGAGAGTCAAATGGTAACATTTaGGACAGCCCAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: QKNTEFICSSLQCPRARESNGNI*DSPAGE
Trigger: TTCCCCAGCTGGGCTGTCCCAAATGTTACCATTTGA...CTCTCTGGCCCTGGGACATTGCAAGCTGCTACAAATAAATTCTGTGTTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp GAGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAACACACTCCTTTGTTaGAAAAGGAGACTAAACAGA +
Preference number: 4 (lower is better)
Translates to: ESTMELLPGWFNLHGSQTNTLLC*KRRLNR
Trigger: TCTGTTTAGTCTCCTTTTTCAACAAAGGAGTGTGTT...CGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp CTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCAAAACCACTCAGGGATTaGAATATAGTGATTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LWSYYQVGLICMGPRRVSKPLRD*NIVIGN
Trigger: GTTCCCAATCACTATATTGCAATCCCTGAGTGGTTT...TGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AGATTCAAGAGGCTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAAGCTGTTCGGATGTCATaGTTAATGCCTTCTACGGAG +
Preference number: 4 (lower is better)
Translates to: RFKRLTDVHLAMTLLSKEAVRMS*LMPSTE
Trigger: CTCCGTAGAAGGCATTAACCATGACATCCGAACAGC...TTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp CTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAACACAGAATTTATAGGGAGTTCCTCCCTTaGGTGATGACACCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: LTDVHLAMTLLSKEHRIYREFLP*VMTPVN
Trigger: ATTCACTGGTGTCATCACTCAAGGGAGGAACTCCCT...ATAAATTCTGTGTTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAACCGACTTCTCCCTCTTaGGAGCTTTCTTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQPTSPS*ELSWAW
Trigger: CCAAGCCCAAGAAAGCTCCCAAGAGGGAGAAGTCGG...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAAAGGCCACCCCACTTCTaGCTCTTTCCAGTCCTAGCA +
Preference number: 4 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQRPPHF*LFPVLA
Trigger: TGCTAGGACTGGAAAGAGCCAGAAGTGGGGTGGCCT...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGATTCAAGAGGCTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAAGATTCCTTTTCCATGTaGATCTCTCACCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RFKRLTDVHLAMTLLSKEDSFSM*ISHQAF
Trigger: AAAGGCTTGGTGAGAGATTCACATGGAAAAGGAATC...TTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR TCA 90 bp AGATTCAAGAGGCTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAAATGTGCACTTGGCAATaGCGCTATTGTCAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: RFKRLTDVHLAMTLLSKEMCTWQ*RYCQKN
Trigger: GTTCTTTTGACAATAGCGTCATTGCCAAGTGCACAT...TTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp CTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAACACAGAATTTATTTGGGACAGCCCAGCTaGGGAAATGCTGCAATTTTA +
Preference number: 4 (lower is better)
Translates to: LTDVHLAMTLLSKEHRIYLGQPS*GNAAIL
Trigger: TAAAATTGCAGCATTTCCCCAGCTGGGCTGTCCCAA...ATAAATTCTGTGTTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CCA 90 bp AGATTCAAGAGGCTCACTGATGTGCACTTGGCAATGACGCTATTGTCAAAAGAATTTGGGGGTTGTTTATaGACCCAGAATTTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RFKRLTDVHLAMTLLSKEFGGCL*TQNLCK
Trigger: CTTGCACAAATTCTGGGTCCATAAACAACCCCCAAA...TTCTTTTGACAATAGCGTCATTGCCAAGTGCACATCAGTGAGCCTCTTGAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAAGAAACCTTCGGCCTTTaGTGTGACCACATACTCTCC +
Preference number: 4 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQETFGL*CDHILS
Trigger: GGAGAGTATGTGGTCACAGCAAAGGCCGAAGGTTTC...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR GCA 90 bp GAGGTTTTCATTACATTTAGCCTAATCTGGAAGATCTGGCATTCTACATATCAATCCACTTCAATCCACTaGTGGAGGTCATTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: EVFITFSLIWKIWHSTYQSTSIH*WRSFLP
Trigger: GGGAAGAAATGACCTCCAGCAGTGGATTGAAGTGGA...TTGATATGTAGAATGCCAGATCTTCCAGATTAGGCTAAATGTAATGAAAACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS CCA 90 bp GGTCACGGTCACCGGGGGCGCCGGGCGGGCTGCGGGCGCAGAAGCTaGCGCGGGGCAAGGGCGCAGGGCACAGCAGAGCGGCGCGCTTGG +
Preference number: 5 (lower is better)
Translates to: GHGHRGRRAGCGRRS*RGARAQGTAERRAW
Trigger: CCAAGCGCGCCGCTCTGCTGTGCCCTGCGCCCTTGCCCCGCGCCAGCTTCTGCGCCCGCAGCCCGCCCGGCGCCCCCGGTGACCGTGACC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000241305.4
ENST00000615851.4
CDS CCA 90 bp GCGGCTCCGGAGCCGACTTCTCCCTCTTGGGAGCTTTCTTGGGCTTaGTGGCCCTCTTGGGCGGCCTGGGCTCCTGCGGGCGCCGCTCCC +
Preference number: 5 (lower is better)
Translates to: AAPEPTSPSWELSWA*WPSWAAWAPAGAAP
Trigger: GGGAGCGGCGCCCGCAGGAGCCCAGGCCGCCCAAGAGGGCCACCAAGCCCAAGAAAGCTCCCAAGAGGGAGAAGTCGGCTCCGGAGCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241305.4
ENST00000615851.4
CDS CCA 90 bp GCTCCGGAGCCGACTTCTCCCTCTTGGGAGCTTTCTTGGGCTTGGTaGCCCTCTTGGGCGGCCTGGGCTCCTGCGGGCGCCGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: APEPTSPSWELSWAW*PSWAAWAPAGAAPT
Trigger: AGTGGGAGCGGCGCCCGCAGGAGCCCAGGCCGCCCAAGAGGGCCACCAAGCCCAAGAAAGCTCCCAAGAGGGAGAAGTCGGCTCCGGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241305.4
ENST00000615851.4
CDS GCA 90 bp CCGGCTCCAGATCTCCTGCCCGTAATAATCAGGGTCCTCGAGGGCTaGGCCCTGGGCTCCGACCCCGGCCAGGGTCACTGCCAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: PAPDLLPVIIRVLEG*ALGSDPGQGHCQEH
Trigger: GTGCTCCTGGCAGTGACCCTGGCCGGGGTCGGAGCCCAGGGCGCAGCCCTCGAGGACCCTGATTATTACGGGCAGGAGATCTGGAGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000241305.4
ENST00000615851.4
CDS CCA 90 bp GCGACGGTGTGCCAGGAGGCCCCATTGACAGTGCCCTCCTCCTTCTaGAAGTCCTCCGTGTGGCACACCCTCCTCCGGGCGTCTGTCATG +
Preference number: 5 (lower is better)
Translates to: ATVCQEAPLTVPSSF*KSSVWHTLLRASVM
Trigger: CATGACAGACGCCCGGAGGAGGGTGTGCCACACGGAGGACTTCCAGAAGGAGGAGGGCACTGTCAATGGGGCCTCCTGGCACACCGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CCA 90 bp CCCACGCTGTCGTCTCTTCTGCCCCCGCAGCTTCAGCCGCCTGGCTaGCAGGCTGACGGGCTGCTTCCCAAACTTCTCCATGATCTCTCG +
Preference number: 5 (lower is better)
Translates to: PTLSSLLPPQLQPPG*QADGLLPKLLHDLS
Trigger: CGAGAGATCATGGAGAAGTTTGGGAAGCAGCCCGTCAGCCTGCCAGCCAGGCGGCTGAAGCTGCGGGGGCAGAAGAGACGACAGCGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS TCA 90 bp TCTGGAAGTCCTCCGTGTGGCACACCCTCCTCCGGGCGTCTGTCATaGGGCGGTGTGTGGAGGCATAGGAGTAGGCCAGCCAGCGGAACA +
Preference number: 5 (lower is better)
Translates to: SGSPPCGTPSSGRLS*GGVWRHRSRPASGT
Trigger: TGTTCCGCTGGCTGGCCTACTCCTATGCCTCCACACACCGCCTCATGACAGACGCCCGGAGGAGGGTGTGCCACACGGAGGACTTCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS TCA 90 bp TCCGAGCCTCTGGAGCTGGGGCCTCGCTGCCCATGTCCTATTGGGTaGGATGGGCCAGGGCCATTACCCCTTCGTAGGCCTTCTCGTAGC +
Preference number: 5 (lower is better)
Translates to: SEPLELGPRCPCPIG*DGPGPLPLRRPSRS
Trigger: GCTACGAGAAGGCCTACGAAGGGGTAATGGCCCTGGCCCATCTCACCCAATAGGACATGGGCAGCGAGGCCCCAGCTCCAGAGGCTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368854.7
CDS GCA 90 bp GGGAGGGGAGGACGTGAATCCGCGTCTCCTCCACCAGGTGGACGATaGGCGCATTCCGGGCCAAGTACTCCTGACACACGAACTGCACCA +
Preference number: 5 (lower is better)
Translates to: GRGGRESASPPPGGR*AHSGPSTPDTRTAP
Trigger: TGGTGCAGTTCGTGTGTCAGGAGTACTTGGCCCGGAATGCGCGCATCGTCCACCTGGTGGAGGAGACGCGGATTCACGTCCTCCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS-3UTR CAA 90 bp GAGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGCGGCCCAGCACCTCATaGCCGTGGGCCCCCGCGATG +
Preference number: 5 (lower is better)
Translates to: ESTMELLPGWFNLHGSQTRPSTS*PWAPAM
Trigger: CATCGCGGGGGCCCACGGCAATGAGGTGCTGGGCCG...CGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAAGGAGCTTTCTTGGGCTaGGTGGCCCTCTTGGGCGGC +
Preference number: 5 (lower is better)
Translates to: FPFGTCLTMHPLFQALLEGAFLG*VALLGG
Trigger: GCCGCCCAAGAGGGCCACCAAGCCCAAGAAAGCTCC...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTCTCTTGGGAGCTTTCTaGGGCTTGGTGGCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: FHTGAIPQAERGLQATPLLLGAF*GLVALL
Trigger: CAAGAGGGCCACCAAGCCCAAGAAAGCTCCCAAGAG...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS GCA 90 bp GTTGCTGTGTTTACCTGCTGCGTGGCCTTGGGCAAGTTGTTGAACTaGCTCAGCCTCAGTTTCTTCATCCCTGGGAGGCCTCAGTCCTGC +
Preference number: 5 (lower is better)
Translates to: VAVFTCCVALGKLLN*LSLSFFIPGRPQSC
Trigger: GCAGGACTGAGGCCTCCCAGGGATGAAGAAACTGAGGCTGAGGCAGTTCAACAACTTGCCCAAGGCCACGCAGCAGGTAAACACAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368854.7
CDS-3UTR CAA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAATGCCAGGAGGCCCCATaGACAGTGCCCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FPFGTCLTMHPLFQALLECQEAP*TVPSSF
Trigger: GAAGGAGGAGGGCACTGTCAATGGGGCCTCCTGGCA...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp GAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACAGGCTCCCCTCCAGCCTTCCCTTTaGGGACCTGCCTCACAATGC +
Preference number: 5 (lower is better)
Translates to: EAPESFSMQPEALNGQAPLQPSL*GPASQC
Trigger: GCATTGTGAGGCAGGTCCCAAAAGGGAAGGCTGGAG...GGGAGCCTGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCGATTCCCAGGTTGGCTaGCTGAGTTCTCTCACTCCC +
Preference number: 5 (lower is better)
Translates to: STQFHTGAIPQAERGLQADSQVG*LSSLTP
Trigger: GGGAGTGAGAGAACTCAGCAAGCCAACCTGGGAATC...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp GGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCCAGCTGGGGAAAGGATCAGCAGGGACTTaGGGGGTTGTTTATGGACCC +
Preference number: 5 (lower is better)
Translates to: GRLGASQMVTFGTAQLGKGSAGT*GVVYGP
Trigger: GGGTCCATAAACAACCCCCAAAGTCCCTGCTGATCC...TTTCCCCAGCTGGGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCATGCCCGCCTGGATGTaGAGTCTCCCTCGATGTGCC +
Preference number: 5 (lower is better)
Translates to: WILLGRLGASQMVTFGTAMPAWM*SLPRCA
Trigger: GGCACATCGAGGGAGACTCAACATCCAGGCGGGCAT...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCCAAGAAGCTCCATGCTaGCTGCCCAACAAACTCCTG +
Preference number: 5 (lower is better)
Translates to: STQFHTGAIPQAERGLQAQEAPC*LPNKLL
Trigger: CAGGAGTTTGTTGGGCAGCAAGCATGGAGCTTCTTG...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS TCA 90 bp GGTGGGCAACTCTCTCTGACATCTTCACGGGCCACACGGACACTGTaGTCATCGTTGGCAGCCTTCTCAGAGCTCTTGGTTCTCATAACT +
Preference number: 5 (lower is better)
Translates to: GGQLSLTSSRATRTL*SSLAAFSELLVLIT
Trigger: AGTTATGAGAACCAAGAGCTCTGAGAAGGCTGCCAACGATGATCACAGTGTCCGTGTGGCCCGTGAAGATGTCAGAGAGAGTTGCCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS GCA 90 bp GCCAACCATACAGTTCTTGGTGGATGCAGTGAAACCTTCGGCCTTTaGTGTGACCACATACTCTCCAGGGTTCAGGAGGCGCCAGTAATC +
Preference number: 5 (lower is better)
Translates to: ANHTVLGGCSETFGL*CDHILSRVQEAPVI
Trigger: GATTACTGGCGCCTCCTGAACCCTGGAGAGTATGTGGTCACAGCAAAGGCCGAAGGTTTCACTGCATCCACCAAGAACTGTATGGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCGCCGACTTCTCCCTCTaGGGAGCTTTCTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: WILLGRLGASQMVTFGTAADFSL*GAFLGL
Trigger: CAAGCCCAAGAAAGCTCCCAAGAGGGAGAAGTCGGC...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS TCA 90 bp TTTTTGTTGCTGTGTTTACCTGCTGCGTGGCCTTGGGCAAGTTGTTaGACTGCCTCAGCCTCAGTTTCTTCATCCCTGGGAGGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: FLLLCLPAAWPWASC*TASASVSSSLGGLS
Trigger: ACTGAGGCCTCCCAGGGATGAAGAAACTGAGGCTGAGGCAGTTCAACAACTTGCCCAAGGCCACGCAGCAGGTAAACACAGCAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368854.7
CDS-3UTR CAA 90 bp TTTAGCTGTGCAAATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGGACGGGTAGCTCATaGAGAACAGGGATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FSCANCKCTWNPCCHANRGTGSS*RTGISF
Trigger: GAAGGAGATCCCTGTTCTCAATGAGCTACCCGTCCC...CCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAATTTGCACAGCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS TCA 90 bp GGTTTATGCGGATGTAGCGGGCCACCATGGGGACGGGTAGCTCATTaGGAACAGGGATCTCCTTCTCACTGTTTCCCTCAAATATCATGT +
Preference number: 5 (lower is better)
Translates to: GLCGCSGPPWGRVAH*EQGSPSHCFPQISC
Trigger: ACATGATATTTGAGGGAAACAGTGAGAAGGAGATCCCTGTTCTCAATGAGCTACCCGTCCCCATGGTGGCCCGCTACATCCGCATAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS GCA 90 bp CTCGGCAGCCACCGTGGCATTTTCCGACAGAAACCACTCAGGGATTaGAATATAGTGATTGGGAACTTTCCTGGGGACATTCTGTCGATC +
Preference number: 5 (lower is better)
Translates to: LGSHRGIFRQKPLRD*NIVIGNFPGDILSI
Trigger: GATCGACAGAATGTCCCCAGGAAAGTTCCCAATCACTATATTGCAATCCCTGAGTGGTTTCTGTCGGAAAATGCCACGGTGGCTGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS GCA 90 bp AGAGCAAAAGCACATCTCACACGGCGGCAGGCAAGAGAAAGCTTCTaGAGGGAAACTCTGCCTGTTCGGATGTCATGGTTAATGCCTTCT +
Preference number: 5 (lower is better)
Translates to: RAKAHLTRRQARESF*RETLPVRMSWLMPS
Trigger: AGAAGGCATTAACCATGACATCCGAACAGGCAGAGTTTCCCTGCAGAAGCTTTCTCTTGCCTGCCGCCGTGTGAGATGTGCTTTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368854.7
ENST00000615851.4
CDS-3UTR CAA 90 bp TTCCCTTTTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAACCAGGTTGGTTTAATTaGCATGGGTCCCAGACGAGT +
Preference number: 5 (lower is better)
Translates to: FPFGTCLTMHPLFQALLEPGWFN*HGSQTS
Trigger: ACTCGTCTGGGACCCATGCAAATTAAACCAACCTGG...TTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAAAAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCACCCCACTTTCTTCCAGGCACTTCTaGAATTACAGAGGAAACAAC +
Preference number: 5 (lower is better)
Translates to: FHTGAIPQAERGLQATPLSSRHF*NYRGNN
Trigger: GTTGTTTCCTCTGTAATTCAAGAAGTGCCTGGAAGA...AAGTGGGGTGGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp CAAAAGAACACAGAATTTATTTGTAGCAGCTTGCAATGTCCCAGGGCCAGAGAGATGCACGTGGAACCCTaGCTGCCACGCAAACAGGGG +
Preference number: 5 (lower is better)
Translates to: QKNTEFICSSLQCPRAREMHVEP*LPRKQG
Trigger: CCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCAT...CTCTCTGGCCCTGGGACATTGCAAGCTGCTACAAATAAATTCTGTGTTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp AGCACTCAATTCCACACAGGGGCAATACCTCAAGCAGAGAGAGGGCTTCAGGCCGAAACCACTCAGGGATaGCAATATAGTGATTGGGAA +
Preference number: 5 (lower is better)
Translates to: STQFHTGAIPQAERGLQAETTQG*QYSDWE
Trigger: TTCCCAATCACTATATTGCAATCCCTGAGTGGTTTC...GGCCTGAAGCCCTCTCTCTGCTTGAGGTATTGCCCCTGTGTGGAATTGAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp AACAGGGGAAGCACCAGAATCCTTTTCTATGCAGCCAGAGGCTCTGAACGGACACTCACTGATGTGCACTaGGCAATGACGCTATTGTCA +
Preference number: 5 (lower is better)
Translates to: NRGSTRILFYAARGSERTLTDVH*AMTLLS
Trigger: TGACAATAGCGTCATTGCCAAGTGCACATCAGTGAG...TGTCCGTTCAGAGCCTCTGGCTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp GGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAATCCTTTTCTATGCAGTTATGGACCCAGAATTaGTGCAAGAAGCTCCATGCT +
Preference number: 5 (lower is better)
Translates to: GTLAATQTGEAPESFSMQLWTQN*CKKLHA
Trigger: AGCATGGAGCTTCTTGCACAAATTCTGGGTCCATAA...CTGCATAGAAAAGGATTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS CCA 90 bp ACAGAAACCACTCAGGGATTGCAATATAGTGATTGGGAACTTTCCTaGGGACATTCTGTCGATCCTCTGCCTCCCAGAGCAGCGTGTTTA +
Preference number: 5 (lower is better)
Translates to: TETTQGLQYSDWELS*GHSVDPLPPRAACL
Trigger: TAAACACGCTGCTCTGGGAGGCAGAGGATCGACAGAATGTCCCCAGGAAAGTTCCCAATCACTATATTGCAATCCCTGAGTGGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CCA 90 bp TGGCATTTTCCGACAGAAACCACTCAGGGATTGCAATATAGTGATTaGGAACTTTCCTGGGGACATTCTGTCGATCCTCTGCCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: WHFPTETTQGLQYSD*ELSWGHSVDPLPPR
Trigger: TCTGGGAGGCAGAGGATCGACAGAATGTCCCCAGGAAAGTTCCCAATCACTATATTGCAATCCCTGAGTGGTTTCTGTCGGAAAATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS-3UTR CAA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCCCAACCATACAGTTCTaGGTGGATGCAGTGAAACCT +
Preference number: 5 (lower is better)
Translates to: WILLGRLGASQMVTFGTAPTIQF*VDAVKP
Trigger: AGGTTTCACTGCATCCACCAAGAACTGTATGGTTGG...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAATTACAGACTGGCCATGTTGGTTTaGCTAAGTGTGAAGTCACAC +
Preference number: 5 (lower is better)
Translates to: LGPASQCTLSSRHFLNYRLAMLV*LSVKSH
Trigger: GTGTGACTTCACACTTAGCAAAACCAACATGGCCAG...TCTGTAATTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp CTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGAGTCTCACGGATCCTGGCCATGTaGGTTTTGCTAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LWSYYQVGLICMGPRRVSRILAM*VLLSVK
Trigger: CTTCACACTTAGCAAAACCAACATGGCCAGGATCCG...TGAGACTCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCTTTATTTGTAGCAGCTaGCAATGTCCCAGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: WILLGRLGASQMVTFGTAFICSS*QCPRAR
Trigger: TCTGGCCCTGGGACATTGCAAGCTGCTACAAATAAA...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp CAAAAGAACACAGAATTTATTTGTAGCAGCTTGCAATGTCCCAGGGCCAGAGAGGAGGGAGTTCCTCCCTaGAGTGATGACACCAGTGAA +
Preference number: 5 (lower is better)
Translates to: QKNTEFICSSLQCPRAREEGVPP*SDDTSE
Trigger: TTCACTGGTGTCATCACTCAAGGGAGGAACTCCCTC...CTCTCTGGCCCTGGGACATTGCAAGCTGCTACAAATAAATTCTGTGTTCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp AGTCCACTATGGAGCTACTACCAGGTTGGTTTAATTTGCATGGGTCCCAGACGACAGGGACTTTGGGGGTaGTTTATGGACCCAGAATTT +
Preference number: 5 (lower is better)
Translates to: SPLWSYYQVGLICMGPRRQGLWG*FMDPEF
Trigger: AAATTCTGGGTCCATAAACAACCCCCAAAGTCCCTG...TCGTCTGGGACCCATGCAAATTAAACCAACCTGGTAGTAGCTCCATAGTGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS CCA 90 bp GCAAGAGAAAGCTTCTGCAGGGAAACTCTGCCTGTTCGGATGTCATaGTTAATGCCTTCTACGGAGATAATGGCGTTTGGGATTCCTTTT +
Preference number: 5 (lower is better)
Translates to: ARESFCRETLPVRMS*LMPSTEIMAFGIPF
Trigger: AAAAGGAATCCCAAACGCCATTATCTCCGTAGAAGGCATTAACCATGACATCCGAACAGGCAGAGTTTCCCTGCAGAAGCTTTCTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368854.7
ENST00000615851.4
CDS-3UTR CAA 90 bp ATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAAGTTCTCATAACTTTTTaGTTGCTGTGTTTACCTGGT +
Preference number: 5 (lower is better)
Translates to: IANARGTLAATQTGEAPEVLITF*LLCLPG
Trigger: ACCAGGTAAACACAGCAACAAAAAAGTTATGAGAAC...TTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TGGATTCTCTTAGGACGCCTGGGAGCATCTCAAATGGTAACATTTGGGACAGCCTCAGGAAAGTTGTTGTaGATGTCAATTCCATCGTGG +
Preference number: 5 (lower is better)
Translates to: WILLGRLGASQMVTFGTASGKLL*MSIPSW
Trigger: CCACGATGGAATTGACATCAACAACAACTTTCCTGA...GGCTGTCCCAAATGTTACCATTTGAGATGCTCCCAGGCGTCCTAAGAGAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp ATTGCAAATGCACGTGGAACCCTTGCTGCCACGCAAACAGGGGAAGCACCAGAAAAATCAGGAAAGTTGTaGTTGATGTCAATTCCATCG +
Preference number: 5 (lower is better)
Translates to: IANARGTLAATQTGEAPEKSGKL*LMSIPS
Trigger: CGATGGAATTGACATCAACAACAACTTTCCTGATTT...TTCTGGTGCTTCCCCTGTTTGCGTGGCAGCAAGGGTTCCACGTGCATTTGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS-3UTR CAA 90 bp TTGGGACCTGCCTCACAATGCACCCTCTCTTCCAGGCACTTCTTGAATTACAGATTGGCAATGACGCTATaGTCAAAAGAACACAGAATT +
Preference number: 5 (lower is better)
Translates to: LGPASQCTLSSRHFLNYRLAMTL*SKEHRI
Trigger: AATTCTGTGTTCTTTTGACAATAGCGTCATTGCCAA...TCTGTAATTCAAGAAGTGCCTGGAAGAGAGGGTGCATTGTGAGGCAGGTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS CCA 90 bp GTTAGTTCCCTTCTTCTTGAAATATATTCACTAGAAGTTCCTCAGTaGGGATATTTTGGTGGTAACAGGGTCAGGACTAGAGTGAGGCAC +
Preference number: 5 (lower is better)
Translates to: VSSLLLEIYSLEVPQ*GYFGGNRVRTRVRH
Trigger: GTGCCTCACTCTAGTCCTGACCCTGTTACCACCAAAATATCCCCACTGAGGAACTTCTAGTGAATATATTTCAAGAAGAAGGGAACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368854.7
CDS CAA 90 bp GGCGGCTCCGGAGCCGACTTCTCCCTCTTGGGAGCTTTCTTGGGCTaGGTGGCCCTCTTGGGCGGCCTGGGCTCCTGCGGGCGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: GGSGADFSLLGAFLG*VALLGGLGSCGRRS
Trigger: GGAGCGGCGCCCGCAGGAGCCCAGGCCGCCCAAGAGGGCCACCAAGCCCAAGAAAGCTCCCAAGAGGGAGAAGTCGGCTCCGGAGCCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241305.4
ENST00000615851.4
CDS CCA 72 bp GAGCCGACTTCTCCCTCTTGGGAGCTTTCTTGGGCTTaGTGGCCCTCTTGGGCGGCCTGGGCTCCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: EPTSPSWELSWA*WPSWAAWAPAG
Trigger: GCCCGCAGGAGCCCAGGCCGCCCAAGAGGGCCACCAAGCCCAAGAAAGCTCCCAAGAGGGAGAAGTCGGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241305.4
ENST00000615851.4
CDS CAA 72 bp GGAGCCGACTTCTCCCTCTTGGGAGCTTTCTTGGGCTaGGTGGCCCTCTTGGGCGGCCTGGGCTCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: GADFSLLGAFLG*VALLGGLGSCG
Trigger: CCCGCAGGAGCCCAGGCCGCCCAAGAGGGCCACCAAGCCCAAGAAAGCTCCCAAGAGGGAGAAGTCGGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000241305.4
ENST00000615851.4
CDS TCA 72 bp CCTCCGTGTGGCACACCCTCCTCCGGGCGTCTGTCATaGGGCGGTGTGTGGAGGCATAGGAGTAGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: PPCGTPSSGRLS*GGVWRHRSRPA
Trigger: GGCTGGCCTACTCCTATGCCTCCACACACCGCCTCATGACAGACGCCCGGAGGAGGGTGTGCCACACGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CCA 72 bp TGCCAGGAGGCCCCATTGACAGTGCCCTCCTCCTTCTaGAAGTCCTCCGTGTGGCACACCCTCCTCCGGGCG +
Preference number: 6 (lower is better)
Translates to: CQEAPLTVPSSF*KSSVWHTLLRA
Trigger: CGCCCGGAGGAGGGTGTGCCACACGGAGGACTTCCAGAAGGAGGAGGGCACTGTCAATGGGGCCTCCTGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CAA 72 bp CCCTCCCTTTCCCGGCGACCCCTCCGAGGCCGGTCCTaGGAGGCAGGTGTTCCAAGCAGCCAAGCCCAAGAA +
Preference number: 6 (lower is better)
Translates to: PSLSRRPLRGRS*EAGVPSSQAQE
Trigger: TTCTTGGGCTTGGCTGCTTGGAACACCTGCCTCCAAGGACCGGCCTCGGAGGGGTCGCCGGGAAAGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615851.4
CDS CCA 72 bp CCTCCCTTTCCCGGCGACCCCTCCGAGGCCGGTCCTTaGAGGCAGGTGTTCCAAGCAGCCAAGCCCAAGAAA +
Preference number: 6 (lower is better)
Translates to: PPFPGDPSEAGP*RQVFQAAKPKK
Trigger: TTTCTTGGGCTTGGCTGCTTGGAACACCTGCCTCCAAGGACCGGCCTCGGAGGGGTCGCCGGGAAAGGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615851.4
CDS CAA 90 bp CCAGCTCCGAGCCTCTGGAGCTGGGGCCTCGCTGCCCATGTCCTATaGGGTGAGATGGGCCAGGGCCATTACCCCTTCGTAGGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: PAPSLWSWGLAAHVL*GEMGQGHYPFVGLL
Trigger: GAGAAGGCCTACGAAGGGGTAATGGCCCTGGCCCATCTCACCCAATAGGACATGGGCAGCGAGGCCCCAGCTCCAGAGGCTCGGAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368854.7
CDS TCA 72 bp CTGGAGCTGGGGCCTCGCTGCCCATGTCCTATTGGGTaGGATGGGCCAGGGCCATTACCCCTTCGTAGGCCT +
Preference number: 6 (lower is better)
Translates to: LELGPRCPCPIG*DGPGPLPLRRP
Trigger: AGGCCTACGAAGGGGTAATGGCCCTGGCCCATCTCACCCAATAGGACATGGGCAGCGAGGCCCCAGCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368854.7
CDS CCA 72 bp TCGTCTCTTCTGCCCCCGCAGCTTCAGCCGCCTGGCTaGCAGGCTGACGGGCTGCTTCCCAAACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: SSLLPPQLQPPG*QADGLLPKLLH
Trigger: ATGGAGAAGTTTGGGAAGCAGCCCGTCAGCCTGCCAGCCAGGCGGCTGAAGCTGCGGGGGCAGAAGAGACGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS GCA 72 bp GGACGTGAATCCGCGTCTCCTCCACCAGGTGGACGATaGGCGCATTCCGGGCCAAGTACTCCTGACACACGA +
Preference number: 6 (lower is better)
Translates to: GRESASPPPGGR*AHSGPSTPDTR
Trigger: TCGTGTGTCAGGAGTACTTGGCCCGGAATGCGCGCATCGTCCACCTGGTGGAGGAGACGCGGATTCACGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CCA 72 bp CTGGTCAGGCGCCGAGCATCCACTTCAATCCACTGCTaGAGGTCATTTCTTCCCGCGCACCACGCTCCGTCA +
Preference number: 6 (lower is better)
Translates to: LVRRRASTSIHC*RSFLPAHHAPS
Trigger: TGACGGAGCGTGGTGCGCGGGAAGAAATGACCTCCAGCAGTGGATTGAAGTGGATGCTCGGCGCCTGACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS GCA 72 bp ATTAATGCCCGCCTGGATGTTGAGTCTCCCTCGATGTaGCCCCAGGCCATAGCGCTTCACCGTGGAGGCATG +
Preference number: 6 (lower is better)
Translates to: INARLDVESPSM*PQAIALHRGGM
Trigger: CATGCCTCCACGGTGAAGCGCTATGGCCTGGGGGCACATCGAGGGAGACTCAACATCCAGGCGGGCATTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS GCA 72 bp AATCTGGTCAGGCGCCGAGCATCCACTTCAATCCACTaGTGGAGGTCATTTCTTCCCGCGCACCACGCTCCG +
Preference number: 6 (lower is better)
Translates to: NLVRRRASTSIH*WRSFLPAHHAP
Trigger: CGGAGCGTGGTGCGCGGGAAGAAATGACCTCCAGCAGTGGATTGAAGTGGATGCTCGGCGCCTGACCAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS TCA 72 bp GTCACCCAGTCACTCAGCCAGAGGGAGTTCCTCCCTTaGGTGATGACACCAGTGAATCTGGTCAGGCGCCGA +
Preference number: 6 (lower is better)
Translates to: VTQSLSQREFLP*VMTPVNLVRRR
Trigger: TCGGCGCCTGACCAGATTCACTGGTGTCATCACTCAAGGGAGGAACTCCCTCTGGCTGAGTGACTGGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CAA 72 bp TGTCACCCAGTCACTCAGCCAGAGGGAGTTCCTCCCTaGAGTGATGACACCAGTGAATCTGGTCAGGCGCCG +
Preference number: 6 (lower is better)
Translates to: CHPVTQPEGVPP*SDDTSESGQAP
Trigger: CGGCGCCTGACCAGATTCACTGGTGTCATCACTCAAGGGAGGAACTCCCTCTGGCTGAGTGACTGGGTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS TCA 72 bp GGATGTAGCGGGCCACCATGGGGACGGGTAGCTCATTaGGAACAGGGATCTCCTTCTCACTGTTTCCCTCAA +
Preference number: 6 (lower is better)
Translates to: GCSGPPWGRVAH*EQGSPSHCFPQ
Trigger: TTGAGGGAAACAGTGAGAAGGAGATCCCTGTTCTCAATGAGCTACCCGTCCCCATGGTGGCCCGCTACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS GCA 72 bp AGATGCTCCCATTATCAAACCAGGACTGAGGGTTTATaGGGATGTAGCGGGCCACCATGGGGACGGGTAGCT +
Preference number: 6 (lower is better)
Translates to: RCSHYQTRTEGL*GCSGPPWGRVA
Trigger: AGCTACCCGTCCCCATGGTGGCCCGCTACATCCGCATAAACCCTCAGTCCTGGTTTGATAATGGGAGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS TCA 72 bp CTCTCTCTGACATCTTCACGGGCCACACGGACACTGTaGTCATCGTTGGCAGCCTTCTCAGAGCTCTTGGTT +
Preference number: 6 (lower is better)
Translates to: LSLTSSRATRTL*SSLAAFSELLV
Trigger: AACCAAGAGCTCTGAGAAGGCTGCCAACGATGATCACAGTGTCCGTGTGGCCCGTGAAGATGTCAGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000481775.1
ENST00000615851.4
CDS GCA 72 bp ACAGTTCTTGGTGGATGCAGTGAAACCTTCGGCCTTTaGTGTGACCACATACTCTCCAGGGTTCAGGAGGCG +
Preference number: 6 (lower is better)
Translates to: TVLGGCSETFGL*CDHILSRVQEA
Trigger: CGCCTCCTGAACCCTGGAGAGTATGTGGTCACAGCAAAGGCCGAAGGTTTCACTGCATCCACCAAGAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS GCA 72 bp GCACATCTCACACGGCGGCAGGCAAGAGAAAGCTTCTaGAGGGAAACTCTGCCTGTTCGGATGTCATGGTTA +
Preference number: 6 (lower is better)
Translates to: AHLTRRQARESF*RETLPVRMSWL
Trigger: TAACCATGACATCCGAACAGGCAGAGTTTCCCTGCAGAAGCTTTCTCTTGCCTGCCGCCGTGTGAGATGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368854.7
ENST00000615851.4
CDS CAA 90 bp CGATCCTCTGCCTCCCAGAGCAGCGTGTTTAAATCAGGAAAGTTGTaGTTGATGTCAATTCCATCGTGGGTCCAGCGTCCCAGGGACCAG +
Preference number: 6 (lower is better)
Translates to: RSSASQSSVFKSGKL*LMSIPSWVQRPRDQ
Trigger: CTGGTCCCTGGGACGCTGGACCCACGATGGAATTGACATCAACAACAACTTTCCTGATTTAAACACGCTGCTCTGGGAGGCAGAGGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS TCA 72 bp AGCGCTTCACCGTGGAGGCATGGAGCTGGAAGTCTGTaGTTTTTAAGGTTTCCAGACCAAGAGGTGGGCAAC +
Preference number: 6 (lower is better)
Translates to: SASPWRHGAGSL*FLRFPDQEVGN
Trigger: GTTGCCCACCTCTTGGTCTGGAAACCTTAAAAATCACAGACTTCCAGCTCCATGCCTCCACGGTGAAGCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CAA 90 bp TGTCGATCCTCTGCCTCCCAGAGCAGCGTGTTTAAATCAGGAAAGTaGTTGTTGATGTCAATTCCATCGTGGGTCCAGCGTCCCAGGGAC +
Preference number: 6 (lower is better)
Translates to: CRSSASQSSVFKSGK*LLMSIPSWVQRPRD
Trigger: GTCCCTGGGACGCTGGACCCACGATGGAATTGACATCAACAACAACTTTCCTGATTTAAACACGCTGCTCTGGGAGGCAGAGGATCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CAA 90 bp GGCTGCTTCCCAAACTTCTCCATGATCTCTCGGATCCTGGCCATGTaGGTTTTGCTAAGTGTGAAGTCACACCTTGTGGCCCCCATGTCA +
Preference number: 6 (lower is better)
Translates to: GCFPNFSMISRILAM*VLLSVKSHLVAPMS
Trigger: TGACATGGGGGCCACAAGGTGTGACTTCACACTTAGCAAAACCAACATGGCCAGGATCCGAGAGATCATGGAGAAGTTTGGGAAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS TCA 72 bp CCCAGAGCAGCGTGTTTAAATCAGGAAAGTTGTTGTTaGTGTCAATTCCATCGTGGGTCCAGCGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: PRAACLNQESCC*CQFHRGSSVPG
Trigger: CCCTGGGACGCTGGACCCACGATGGAATTGACATCAACAACAACTTTCCTGATTTAAACACGCTGCTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CAA 72 bp TTCTCCATGATCTCTCGGATCCTGGCCATGTTGGTTTaGCTAAGTGTGAAGTCACACCTTGTGGCCCCCATG +
Preference number: 6 (lower is better)
Translates to: FSMISRILAMLV*LSVKSHLVAPM
Trigger: CATGGGGGCCACAAGGTGTGACTTCACACTTAGCAAAACCAACATGGCCAGGATCCGAGAGATCATGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS CAA 90 bp TCTCGGCAGCCACCGTGGCATTTTCCGACAGAAACCACTCAGGGATaGCAATATAGTGATTGGGAACTTTCCTGGGGACATTCTGTCGAT +
Preference number: 6 (lower is better)
Translates to: SRQPPWHFPTETTQG*QYSDWELSWGHSVD
Trigger: ATCGACAGAATGTCCCCAGGAAAGTTCCCAATCACTATATTGCAATCCCTGAGTGGTTTCTGTCGGAAAATGCCACGGTGGCTGCCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS TCA 72 bp AGATGGACAGTTCGAAGCAGTTTGTATGAAGGTAGCTaGAATCGTTCAGACTTCCAGCGACGGTGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: RWTVRSSLYEGS*NRSDFQRRCAR
Trigger: CCTGGCACACCGTCGCTGGAAGTCTGAACGATTTCAGCTACCTTCATACAAACTGCTTCGAACTGTCCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CCA 72 bp ACTCAGGGATTGCAATATAGTGATTGGGAACTTTCCTaGGGACATTCTGTCGATCCTCTGCCTCCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: TQGLQYSDWELS*GHSVDPLPPRA
Trigger: TGCTCTGGGAGGCAGAGGATCGACAGAATGTCCCCAGGAAAGTTCCCAATCACTATATTGCAATCCCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CCA 72 bp AGCTTCTGCAGGGAAACTCTGCCTGTTCGGATGTCATaGTTAATGCCTTCTACGGAGATAATGGCGTTTGGG +
Preference number: 6 (lower is better)
Translates to: SFCRETLPVRMS*LMPSTEIMAFG
Trigger: CCCAAACGCCATTATCTCCGTAGAAGGCATTAACCATGACATCCGAACAGGCAGAGTTTCCCTGCAGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368854.7
ENST00000615851.4
CDS CAA 72 bp TCCCAGAGCAGCGTGTTTAAATCAGGAAAGTTGTTGTaGATGTCAATTCCATCGTGGGTCCAGCGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SQSSVFKSGKLL*MSIPSWVQRPR
Trigger: CCTGGGACGCTGGACCCACGATGGAATTGACATCAACAACAACTTTCCTGATTTAAACACGCTGCTCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CAA 72 bp CCAAACTTCTCCATGATCTCTCGGATCCTGGCCATGTaGGTTTTGCTAAGTGTGAAGTCACACCTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: PNFSMISRILAM*VLLSVKSHLVA
Trigger: GGCCACAAGGTGTGACTTCACACTTAGCAAAACCAACATGGCCAGGATCCGAGAGATCATGGAGAAGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000241305.4
CDS CCA 72 bp CCGACAGAAACCACTCAGGGATTGCAATATAGTGATTaGGAACTTTCCTGGGGACATTCTGTCGATCCTCTG +
Preference number: 6 (lower is better)
Translates to: PTETTQGLQYSD*ELSWGHSVDPL
Trigger: CAGAGGATCGACAGAATGTCCCCAGGAAAGTTCCCAATCACTATATTGCAATCCCTGAGTGGTTTCTGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CCA 72 bp GGAACGCTGGGTAACCTGTCATGCATTGCAGAAACATaGAGATCCCCCTGTTTGACATTTTCTCCTGTTAAT +
Preference number: 6 (lower is better)
Translates to: GTLGNLSCIAET*RSPCLTFSPVN
Trigger: ATTAACAGGAGAAAATGTCAAACAGGGGGATCTCCATGTTTCTGCAATGCATGACAGGTTACCCAGCGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368854.7
CDS TCA 72 bp TACGGAGATAATGGCGTTTGGGATTCCTTTTCCATGTaGATCTCTCACCAAGCCTTTAATGCCACGATGAAC +
Preference number: 6 (lower is better)
Translates to: YGDNGVWDSFSM*ISHQAFNATMN
Trigger: GTTCATCGTGGCATTAAAGGCTTGGTGAGAGATTCACATGGAAAAGGAATCCCAAACGCCATTATCTCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS TCA 72 bp GGCCCTGGTGGCTTTTTCCAATGTTGTAAATTCTGGTaGTATTGGGACACATTTCATTCACAACTTTCATCA +
Preference number: 6 (lower is better)
Translates to: GPGGFFQCCKFW*YWDTFHSQLSS
Trigger: TGATGAAAGTTGTGAATGAAATGTGTCCCAATATCACCAGAATTTACAACATTGGAAAAAGCCACCAGGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000241305.4
ENST00000368854.7
ENST00000615851.4
CDS CCA 72 bp CTTCTTCTTGAAATATATTCACTAGAAGTTCCTCAGTaGGGATATTTTGGTGGTAACAGGGTCAGGACTAGA +
Preference number: 6 (lower is better)
Translates to: LLLEIYSLEVPQ*GYFGGNRVRTR
Trigger: TCTAGTCCTGACCCTGTTACCACCAAAATATCCCCACTGAGGAACTTCTAGTGAATATATTTCAAGAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368854.7
CDS TCA 72 bp AATTATCCCATTACAGAAACCATGTACTTGGAATACTaGTTGTGCTTCAGAATAATCCAATTCCATTCACTG +
Preference number: 6 (lower is better)
Translates to: NYPITETMYLEY*LCFRIIQFHSL
Trigger: CAGTGAATGGAATTGGATTATTCTGAAGCACAATCAGTATTCCAAGTACATGGTTTCTGTAATGGGATAATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368854.7