RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPT1C (Homo sapiens)

Ensembl gene IDs: ENSG00000169169

Ensembl transcript IDs: ENST00000295404.9, ENST00000323446.9, ENST00000392518.8, ENST00000405931.6, ENST00000594038.5, ENST00000594431.1, ENST00000594587.5, ENST00000595031.1, ENST00000595568.5, ENST00000595901.5, ENST00000595969.5, ENST00000596701.1, ENST00000596922.5, ENST00000597099.1, ENST00000598072.1, ENST00000598259.5, ENST00000598293.6, ENST00000598396.5, ENST00000598647.1, ENST00000598714.5, ENST00000599023.5, ENST00000599937.5, ENST00000600944.5, ENST00000602019.5

Found 981 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCTGCCGGGTCCTCCCTGGTGAGCCCCGCGGGCTCAGCATCCAGTaGCACAAAGAAAGCGGCCCCTTCCACCGCCTCCAGGGCCTCCGC +
Preference number: 1 (lower is better)
Translates to: RCRVLPGEPRGLSIQ*HKESGPFHRLQGLR
Trigger: GCGGAGGCCCTGGAGGCGGTGGAAGGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCCGCGGGGCTCACCAGGGAGGACCCGGCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 90 bp ACAAAGAAAGCGGCCCCTTCCACCGCCTCCAGGGCCTCCGCTGCCTaGGTCTTCAGGGATGTCCGCACCTGGGCCCACGTGCCCCTGGGA +
Preference number: 1 (lower is better)
Translates to: TKKAAPSTASRASAA*VFRDVRTWAHVPLG
Trigger: TCCCAGGGGCACGTGGGCCCAGGTGCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGGAGGCGGTGGAAGGGGCCGCTTTCTTTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR TCA 90 bp CCTGCACAGAGGGCACGGGCTGGCGTGGCAGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGCCAGAGAAGATGCGGACCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: PAQRARAGVAGSAGN*TASGGGQRRCGPGP
Trigger: TGGCCCTGGTCCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR CCA 90 bp CCTGCGCCAGGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGTACTTGCGCACGGTGTCCTGCACAG +
Preference number: 1 (lower is better)
Translates to: PAPGPRSSRSPRRRG*AGPTPGTCARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCTGGCGCAGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR CCA 90 bp GGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTGTG +
Preference number: 1 (lower is better)
Translates to: GISWRFRRWRYRRRA*TAFPARAACRGVGV
Trigger: CACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR GCA 90 bp GCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGCGCCAGGACCGCGGTCCAGTCGAAG +
Preference number: 1 (lower is better)
Translates to: AHQDLSRRYHCSSDA*SLRNSCARTAVQSK
Trigger: CTTCGACTGGACCGCGGTCCTGGCGCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR GCA 90 bp CGGTCAACTCCCTGCCCGCTCATGGCTGCCTTCAGCAGAGCCTGGTaGTTGTCCACTGCCACGCGGAACAGGGCGAGGCACTGTGGGTCC +
Preference number: 1 (lower is better)
Translates to: RSTPCPLMAAFSRAW*LSTATRNRARHCGS
Trigger: GGACCCACAGTGCCTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR TCA 90 bp GCCAGCCGTGGTAGGACAGAAGCAGCCTCAGGGCCACGTGCAGTGTaGAGATCAGGGCTCCCCACAAACACGAGGCAAACAGCGCGGCTG +
Preference number: 1 (lower is better)
Translates to: ASRGRTEAASGPRAV*RSGLPTNTRQTARL
Trigger: CAGCCGCGCTGTTTGCCTCGTGTTTGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCTGCTTCTGTCCTACCACGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR GCA 90 bp GTACAGCGCAAACAGGTGGCGGTCAACTCCCTGCCCGCTCATGGCTaGCTTCAGCAGAGCCTGGTGCTTGTCCACTGCCACGCGGAACAG +
Preference number: 1 (lower is better)
Translates to: VQRKQVAVNSLPAHG*LQQSLVLVHCHAEQ
Trigger: CTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 90 bp ATTCCCATCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCT +
Preference number: 1 (lower is better)
Translates to: IPISKVGGISWRFRR*RYRRRAWTAFPARA
Trigger: AGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGATGGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR CCA 90 bp AGAAGATGCGGACCAGGGCCAGCCAGGTCTTGGTGGGGGAGGACATaGCTCCGTGGGGCTCAAGAAGCCAGCCGTGGTAGGACAGAAGCA +
Preference number: 1 (lower is better)
Translates to: RRCGPGPARSWWGRT*LRGAQEASRGRTEA
Trigger: TGCTTCTGTCCTACCACGGCTGGCTTCTTGAGCCCCACGGAGCCATGTCCTCCCCCACCAAGACCTGGCTGGCCCTGGTCCGCATCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 90 bp CGATGTACAGCGCAAACAGGTGGCGGTCAACTCCCTGCCCGCTCATaGCTGCCTTCAGCAGAGCCTGGTGCTTGTCCACTGCCACGCGGA +
Preference number: 1 (lower is better)
Translates to: RCTAQTGGGQLPARS*LPSAEPGACPLPRG
Trigger: TCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTACATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 90 bp GACTGCAGGTGGAGGAATCGGGACACGATGTACAGCGCAAACAGGTaGCGGTCAACTCCCTGCCCGCTCATGGCTGCCTTCAGCAGAGCC +
Preference number: 1 (lower is better)
Translates to: DCRWRNRDTMYSANR*RSTPCPLMAAFSRA
Trigger: GGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTACATCGTGTCCCGATTCCTCCACCTGCAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR TCA 90 bp TGTTCCTCGTGGGGGCAGGCCGGTGAGGGATCATCCAGGATTCTCTaGAACTGCTGCTCCAGGGCTCTCGGGGAAAGCAGGCTGTTTCGG +
Preference number: 1 (lower is better)
Translates to: CSSWGQAGEGSSRIL*NCCSRALGESRLFR
Trigger: CCGAAACAGCCTGCTTTCCCCGAGAGCCCTGGAGCAGCAGTTTCAGAGAATCCTGGATGATCCCTCACCGGCCTGCCCCCACGAGGAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR GCA 90 bp GTGGCGGTACAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTaGCTGCAGAGGCGTGGGTGTGACATACAGGAAGTCCATCATGTA +
Preference number: 1 (lower is better)
Translates to: VAVQEEGMDGIPSAS*LQRRGCDIQEVHHV
Trigger: TACATGATGGACTTCCTGTATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR TCA 90 bp AGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGCCGGTaGGGGATCATCCAGGATTCTCTGAAACTGCTGCTCCAGGGCTCT +
Preference number: 1 (lower is better)
Translates to: SSCQSCQMFLVGAGR*GIIQDSLKLLLQGS
Trigger: AGAGCCCTGGAGCAGCAGTTTCAGAGAATCCTGGATGATCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 90 bp GTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGG +
Preference number: 1 (lower is better)
Translates to: VGLPNQLPLSCVSQL*QFHPYSLERPAACW
Trigger: CCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
3UTR CCA 90 bp TGTGGACGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTGGTaGACAGCTGCCACTGCTCCGAATGGACCTGGGTCAGGAAGGGCG +
Preference number: 1 (lower is better)
Translates to: CGRQTDAFAEQGSGW*TAATAPNGPGSGRA
Trigger: CGCCCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 90 bp TGGGCCAGTTGCAAGGCGATCTGGATGAAGCTGTCTGAAGAGAGGTaGCAGCGTCGGATGAAGCTCTTGCCAAATAGGGAGAATGGAACG +
Preference number: 1 (lower is better)
Translates to: WASCKAIWMKLSEER*QRRMKLLPNRENGT
Trigger: CGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAGATCGCCTTGCAACTGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 90 bp AATTGTGGACGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTaGTGGACAGCTGCCACTGCTCCGAATGGACCTGGGTCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: NCGRQTDAFAEQGSG*WTAATAPNGPGSGR
Trigger: CCTTCCTGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 90 bp GGGAGAATGGAACGACATGGCAGTCGACATTTTCAGACAAGATCTTaGCTCCCCTCAGGGCTAGAGAGATGGAGGAGTGGATCTGGTCTG +
Preference number: 1 (lower is better)
Translates to: GRMERHGSRHFQTRS*LPSGLERWRSGSGL
Trigger: CAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR GCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTaGCCCTGTCCTGTGTCAGCCAGCTGTGGCAATTTCACCCTTATT +
Preference number: 1 (lower is better)
Translates to: AHTSLLAWMWGCQTS*PCPVSASCGNFTLI
Trigger: AATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
3UTR CCA 90 bp CAGCGTCGGATGAAGCTCTTGCCAAATAGGGAGAATGGAACGACATaGCAGTCGACATTTTCAGACAAGATCTTGGCTCCCCTCAGGGCT +
Preference number: 1 (lower is better)
Translates to: QRRMKLLPNRENGTT*QSTFSDKILAPLRA
Trigger: AGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR GCA 90 bp AGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTTTGCGCACGGTGTCCTaGACAGAGGGCACGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RRRAWTAFPARAACRGVGLRTVS*TEGTGW
Trigger: CCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAA...ACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp ACGTGCCCCTGGGAGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGGTCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: TCPWEQLSELPDVPRGGRVGGIS*RFRRWR
Trigger: CCGCCACCGCCTGAACCGCCAGGAGATACCCCCGAC...CCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCTCCCAGGGGCACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR CCA 90 bp TCATGGCTGCCTTCAGCAGAGCCTGGTGCTTGTCCACTGCCACGCGGAACAGGGACAGAGGGCACGGGCTaGCGTGGCAGGGAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: SWLPSAEPGACPLPRGTGTEGTG*RGRERW
Trigger: CCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGT...CCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR CCA 90 bp GGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTGTGACATACCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GMDGIPSASCLQRRGCDIPRRRG*AGPTPG
Trigger: ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGG...TATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR GCA 90 bp TCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: SAKSGVSPGGSGGGGTGGSRRYH*SSDACS
Trigger: GCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCT...TCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp TTCCCATCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGGCACGGGCTGGCGTaGCAGGGAGCGCTGGTAACT +
Preference number: 2 (lower is better)
Translates to: FPSAKSGVSPGGSGGGGTGHGLA*QGALVT
Trigger: AGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC...TGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGATGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp GGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTGTGACATACTGAACAGCATCGGGTaGCGGCCAGAGAAGATGCGG +
Preference number: 2 (lower is better)
Translates to: GMDGIPSASCLQRRGCDILNSIG*RPEKMR
Trigger: CCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAG...TATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp CGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTACAGAGGGCACGGGCTaGCGTGGCAGGGAGCGCTGG +
Preference number: 2 (lower is better)
Translates to: RTGQSIRGAFPSAKSGVSTEGTG*RGRERW
Trigger: CCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGT...AGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp AGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGA +
Preference number: 2 (lower is better)
Translates to: SKVGGISWRFRRWRYRRRYRRRA*TAFPAR
Trigger: TCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTA...CCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR TCA 90 bp CAGAGCATGGGCGTAGGCATCCAACGACGCTGCCGGGTCCTCCCTGGTGAGCCCTCATCCAGGATTCTCTaGAACTGCTGCTCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: QSMGVGIQRRCRVLPGEPSSRIL*NCCSRA
Trigger: AGCCCTGGAGCAGCAGTTTCAGAGAATCCTGGATGA...GGGCTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCCTACGCCCATGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR CCA 90 bp GTCACTGACATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGGGGCACGGGCTGGCGTaGCAGGGAGCGCTGGTAACT +
Preference number: 2 (lower is better)
Translates to: VTDIIGRPPGLEPQVPLQGHGLA*QGALVT
Trigger: AGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC...CTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTATGTCAGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR TCA 90 bp CGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: RTGQSIRGAFPSAKSGVSGSAGN*TASGGG
Trigger: GCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCC...AGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR TCA 90 bp TCATGGCTGCCTTCAGCAGAGCCTGGTGCTTGTCCACTGCCACGCGGAACAGGGGGTGGCAGCGTCGGATaGAGCTCTTGCCAAATAGGG +
Preference number: 2 (lower is better)
Translates to: SWLPSAEPGACPLPRGTGGGSVG*SSCQIG
Trigger: CCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACC...CCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR GCA 90 bp CGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTTTGCGCACGGTGTCCTaGACAGAGGGCACGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RTGQSIRGAFPSAKSGVSLRTVS*TEGTGW
Trigger: CCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAA...AGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR GCA 90 bp ACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTCCTAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: TGQSIRGAFPSAKSGVSPSRRYH*SSDACS
Trigger: GCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCT...AGGAGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR GCA 90 bp CGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTAGCCTCAGGAATTCCTaGGCCAGGACCGCGGTCCAG +
Preference number: 2 (lower is better)
Translates to: RTGQSIRGAFPSAKSGVSSLRNS*ARTAVQ
Trigger: CTGGACCGCGGTCCTGGCGCAGGAATTCCTGAGGCT...AGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp GTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: VLAVMEVADVVFLDPWNPWRFRR*RYRRRA
Trigger: TGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCA...CGGATTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp CTGGGAGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGCCGGTGAGAGGAACCAGGCAAGCTaGATGGCACTGAAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LGAAVRAARCSSWGQAGERNQAS*MALKRK
Trigger: TTTCCTCTTCAGTGCCATCCAGCTTGCCTGGTTCCT...CTCACCGGCCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR TCA 90 bp CATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAGTCACTGACACGCCCACCAGGACTTaGGCCGCAGGTACCACTGCA +
Preference number: 2 (lower is better)
Translates to: HQRISGAQVHKFLPPVTDTPTRT*AAGTTA
Trigger: TGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGT...GTCAGTGACTGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR GCA 90 bp CCAGTCACTGACATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCCGACTCCAGGTACTTaGGCACGGTGTCCTGCACAG +
Preference number: 2 (lower is better)
Translates to: PVTDIIGRPPGLEPQVPLPTPGT*ARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG...CAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTATGTCAGTGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR GCA 90 bp AGCCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGC +
Preference number: 2 (lower is better)
Translates to: SHVLAVMEVADVVFLDPWCSSDA*SLRNSC
Trigger: GCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCA...CCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR TCA 90 bp GCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: ADVVFLDPWNPRGVEDLLGSAGN*TASGGG
Trigger: GCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCC...GAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR TCA 90 bp GAAGACAGCCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACACGCCCACCAGGACTTaGGCCGCAGGTACCACTGCA +
Preference number: 2 (lower is better)
Translates to: EDSHVLAVMEVADVVFLDTPTRT*AAGTTA
Trigger: TGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGT...GTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGGCTGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR GCA 90 bp CCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAACCGACTCCAGGTACTTaGGCACGGTGTCCTGCACAG +
Preference number: 2 (lower is better)
Translates to: PRVGCHGGGGCSLFGPLEPTPGT*ARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG...TTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR GCA 90 bp GCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCCCAGCGCGAGCTGCCTaGAGAGGCGTGGGTGTGACA +
Preference number: 2 (lower is better)
Translates to: ADVVFLDPWNPRGVEDLLPARAA*RGVGVT
Trigger: TGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGG...GAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp TCTTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCACCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: SFWTPGIRVVLKIFSYWAPRRRG*AGPTPG
Trigger: ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGG...TGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp CGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGCATAAGGGGCGCATTCCCAAGACAGCCACGTGTTaGCTGTCATGGAGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: RVVLKIFSYWAEHKGRIPKTATC*LSWRWR
Trigger: CCGCCACCTCCATGACAGCCAACACGTGGCTGTCTT...GGGAATGCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTTCAACACCACGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp TCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGATTAGTCCCAGCTACTTaGAAGGCTGAAGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: SAKSGVSPGGSGGGGTGGLVPAT*KAEAGG
Trigger: TCCTCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAA...TCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR GCA 90 bp CGACATTTTCAGACAAGATCTTGGCTCCCCTCAGGGCTAGAGAGATGGAGGAGTTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGC +
Preference number: 2 (lower is better)
Translates to: RHFQTRSWLPSGLERWRSCSSDA*SLRNSC
Trigger: GCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCA...ACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR TCA 90 bp AATTGTGGACGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTGGTGGACAGGGCCACGTGCAGTGTaGAGATCAGGGCTCCCCACA +
Preference number: 2 (lower is better)
Translates to: NCGRQTDAFAEQGSGWWTGPRAV*RSGLPT
Trigger: TGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCC...TGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR GCA 90 bp CGACATTTTCAGACAAGATCTTGGCTCCCCTCAGGGCTAGAGAGATGGAGGAGTAGCCTCAGGGCCACGTaGAGTGTGAAGATCAGGGCT +
Preference number: 2 (lower is better)
Translates to: RHFQTRSWLPSGLERWRSSLRAT*SVKIRA
Trigger: AGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCT...ACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR GCA 90 bp AATTGTGGACGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTGGTGGACACTGCCCGCTCATGGCTaGCTTCAGCAGAGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: NCGRQTDAFAEQGSGWWTLPAHG*LQQSLV
Trigger: CACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAG...TGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR CCA 90 bp GTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGAAGATCTTCTCGTACTaGGCAGAGCATAAGGGGCGC +
Preference number: 2 (lower is better)
Translates to: VLAVMEVADVVFLDPWNPKIFSY*AEHKGR
Trigger: GCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTT...CGGATTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR TCA 90 bp TTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGCAGAGGCGTGGGTGTaGCATACAGGAAGTCCATCA +
Preference number: 2 (lower is better)
Translates to: FLDPWNPRGVEDLLVLGRAEAWV*HTGSPS
Trigger: TGATGGACTTCCTGTATGTCACACCCACGCCTCTGC...TCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVFTLIP*RGQLPA
Trigger: AGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAA...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
3UTR-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCATTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSFTLIP*RGQLPA
Trigger: AGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAA...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
3UTR CAA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTaGCCCCTGTCCTGTGTCAGCCAGCTGTGGCAATTTCACCCTTAT +
Preference number: 2 (lower is better)
Translates to: SSHIFIGLDVGLPNQ*PLSCVSQLWQFHPY
Trigger: ATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
3UTR CAA 90 bp AGGGAGAATGGAACGACATGGCAGTCGACATTTTCAGACAAGATCTaGGCTCCCCTCAGGGCTAGAGAGATGGAGGAGTGGATCTGGTCT +
Preference number: 2 (lower is better)
Translates to: RENGTTWQSTFSDKI*APLRAREMEEWIWS
Trigger: AGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCC +
Preference number: 2 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPCVSQL*QFHPYS
Trigger: GGAATAAGGGTGAAATTGCCACAGCTGGCTGACACA...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
3UTR-3UTR CCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCC +
Preference number: 2 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPCVSQL*QFHPYS
Trigger: GGAATAAGGGTGAAATTGCCACAGCTGGCTGACACA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
3UTR-3UTR CCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTaGAAGGCTGAAGCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFLVPAT*KAEAGG
Trigger: TCCTCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAA...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594038.5
ENST00000596922.5
ENST00000598259.5
3UTR-3UTR TCA 90 bp CCAAATAGGGAGAATGGAACGACATGGCAGTCGACATTTTCAGACAAGATCTTGGGGCTCAGCATCCAGTaGCACAAAGAAAGCGGCCCC +
Preference number: 2 (lower is better)
Translates to: PNRENGTTWQSTFSDKILGLSIQ*HKESGP
Trigger: GGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCC...CAAGATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR GCA 90 bp ACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTCCTCCATCATGTAATAGTTaGTGTTCACCATCAGCGGAT +
Preference number: 2 (lower is better)
Translates to: TGQSIRGAFPSAKSGVSPPSCNS*CSPSAD
Trigger: ATCCGCTGATGGTGAACAGCAACTATTACATGATGG...AGGAGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CCA 90 bp AATTGTGGACGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTGGTGGACAAAGGAAGGATCCAGCTaGAGGAACCAGGCAAGCTGG +
Preference number: 2 (lower is better)
Translates to: NCGRQTDAFAEQGSGWWTKEGSS*RNQASW
Trigger: CCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTT...TGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CAA 90 bp TGGATGAAGCTGTCTGAAGAGAGGTGGCAGCGTCGGATGAAGCTCTaGCCAAATAGGGAGAATGGAACGACATGGCAGTCGACATTTTCA +
Preference number: 2 (lower is better)
Translates to: WMKLSEERWQRRMKL*PNRENGTTWQSTFS
Trigger: TGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAGCTTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR GCA 90 bp GTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCCATCATGTAATAGTTaGTGTTCACCATCAGCGGAT +
Preference number: 2 (lower is better)
Translates to: VLAVMEVADVVFLDPWNPPSCNS*CSPSAD
Trigger: ATCCGCTGATGGTGAACAGCAACTATTACATGATGG...CGGATTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR GCA 72 bp GGCCGGACCGACTCCAGGTACTTGCGCACGGTGTCCTaGACAGAGGGCACGGGCTGGCGTGGCAGGGAGCGC +
Preference number: 3 (lower is better)
Translates to: GRTDSRYLRTVS*TEGTGWRGRER
Trigger: GCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR GCA 72 bp GGCCAGCAGAGCATGGGCGTAGGCATCCAACGACGCTaGCGGGTCCTCCCTGGTGAGCCCCGCGGGCTCAGC +
Preference number: 3 (lower is better)
Translates to: GQQSMGVGIQRR*RVLPGEPRGLS
Trigger: GCTGAGCCCGCGGGGCTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCCTACGCCCATGCTCTGCTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR GCA 72 bp GAAAGCGGCCCCTTCCACCGCCTCCAGGGCCTCCGCTaGCTGGGTCTTCAGGGATGTCCGCACCTGGGCCCA +
Preference number: 3 (lower is better)
Translates to: ESGPFHRLQGLR*LGLQGCPHLGP
Trigger: TGGGCCCAGGTGCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGGAGGCGGTGGAAGGGGCCGCTTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp TGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: WRFRRWRYRRRA*TAFPARAACRG
Trigger: GCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR TCA 72 bp AGGGCACGGGCTGGCGTGGCAGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGCCAGAGAAGATGCGGA +
Preference number: 3 (lower is better)
Translates to: RARAGVAGSAGN*TASGGGQRRCG
Trigger: TCCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR TCA 72 bp GTCCTCCCTGGTGAGCCCCGCGGGCTCAGCATCCAGTaGCACAAAGAAAGCGGCCCCTTCCACCGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: VLPGEPRGLSIQ*HKESGPFHRLQ
Trigger: CTGGAGGCGGTGGAAGGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCCGCGGGGCTCACCAGGGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR GCA 72 bp GACTTGAGCCGCAGGTACCACTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGCGCCAGGACCGCGGTC +
Preference number: 3 (lower is better)
Translates to: DLSRRYHCSSDA*SLRNSCARTAV
Trigger: GACCGCGGTCCTGGCGCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR CCA 72 bp GGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGTACTTGCGCACGGTGT +
Preference number: 3 (lower is better)
Translates to: GPRSSRSPRRRG*AGPTPGTCARC
Trigger: ACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR CCA 72 bp GGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCA +
Preference number: 3 (lower is better)
Translates to: GRIPISKVGGIS*RFRRWRYRRRA
Trigger: TGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGATGGGAATGCGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR GCA 72 bp TTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGCCTCAGGAATTCCTGC +
Preference number: 3 (lower is better)
Translates to: LDAHQDLSRRYH*SSDACSLRNSC
Trigger: GCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR GCA 72 bp CAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTaGCTGCAGAGGCGTGGGTGTGACATACAGGAAGTC +
Preference number: 3 (lower is better)
Translates to: QEEGMDGIPSAS*LQRRGCDIQEV
Trigger: GACTTCCTGTATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR CCA 72 bp AGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCATGGACGGCATTCCCA +
Preference number: 3 (lower is better)
Translates to: SKVGGISWRFRR*RYRRRAWTAFP
Trigger: TGGGAATGCCGTCCATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CAA 90 bp AAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATACCGACTCCAGGTACTaGCGCACGGTGTCCTGCACA +
Preference number: 3 (lower is better)
Translates to: KSGVSPGGSGGGGTGGGHTDSRY*RTVSCT
Trigger: TGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGT...ATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR-3UTR CAA 90 bp CAGGAGTGCTCCACGCTGAGGCCCAGCTTCCCGTTAGAGAAGACGATTAGGGTGCCGGAGCCCGTGGTGTaGTCCACCCCAGTCAGGCAG +
Preference number: 3 (lower is better)
Translates to: QECSTLRPSFPLEKTIRVPEPVV*STPVRQ
Trigger: CTGCCTGACTGGGGTGGACAACACCACGGGCTCCGG...CACCCTAATCGTCTTCTCTAACGGGAAGCTGGGCCTCAGCGTGGAGCACTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR GCA 72 bp AGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTaGAGAGGCGTGGGTGTGACATACAGGAAGTCCATC +
Preference number: 3 (lower is better)
Translates to: RRAWTAFPARAA*RGVGVTYRKSI
Trigger: GATGGACTTCCTGTATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR GCA 72 bp AAACAGGTGGCGGTCAACTCCCTGCCCGCTCATGGCTaGCTTCAGCAGAGCCTGGTGCTTGTCCACTGCCAC +
Preference number: 3 (lower is better)
Translates to: KQVAVNSLPAHG*LQQSLVLVHCH
Trigger: GTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp CTGGGAGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTaGGGGCAGGCCGGTGAGGGATCATCCAGGATTCTC +
Preference number: 3 (lower is better)
Translates to: LGAAVRAARCSS*GQAGEGSSRIL
Trigger: GAGAATCCTGGATGATCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp TGGAGGAATCGGGACACGATGTACAGCGCAAACAGGTaGCGGTCAACTCCCTGCCCGCTCATGGCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: WRNRDTMYSANR*RSTPCPLMAAF
Trigger: GAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTACATCGTGTCCCGATTCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR CAA 90 bp AGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTTCAGGCAGCAACTCTTaGATCTTCTCCATCAGTCCT +
Preference number: 3 (lower is better)
Translates to: RRRAWTAFPARAACRGVGSGSNS*IFSISP
Trigger: AGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGA...ACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR TCA 72 bp CAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGCCGGTaGGGGATCATCCAGGATTCTCTGAAACTGCTGCTC +
Preference number: 3 (lower is better)
Translates to: QSCQMFLVGAGR*GIIQDSLKLLL
Trigger: GAGCAGCAGTTTCAGAGAATCCTGGATGATCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGCAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR TCA 72 bp GCATTCTGTAGCCAGAGTGAACTCCCACATGTGTCCTaGGATGGGGCAGTCGGCCCAGGAGTGCTCCACGCT +
Preference number: 3 (lower is better)
Translates to: AFCSQSELPHVS*DGAVGPGVLHA
Trigger: AGCGTGGAGCACTCCTGGGCCGACTGCCCCATCTCAGGACACATGTGGGAGTTCACTCTGGCTACAGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR CAA 90 bp GACTGCAGGTGGAGGAATCGGGACACGATGTACAGCGCAAACAGGTGGCGGTCACCGGAAGTGGGCCAGTaGCAAGGCGATCTGGATGAA +
Preference number: 3 (lower is better)
Translates to: DCRWRNRDTMYSANRWRSPEVGQ*QGDLDE
Trigger: TTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGG...TGACCGCCACCTGTTTGCGCTGTACATCGTGTCCCGATTCCTCCACCTGCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR-3UTR CAA 90 bp TCATGGCTGCCTTCAGCAGAGCCTGGTGCTTGTCCACTGCCACGCGGAACAGGGATAAGTCAGGCAGAATaGACCCCTGTCCCGGAAGTG +
Preference number: 3 (lower is better)
Translates to: SWLPSAEPGACPLPRGTGISQAE*TPVPEV
Trigger: CACTTCCGGGACAGGGGTCAATTCTGCCTGACTTAT...CCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR TCA 72 bp GGTAGGACAGAAGCAGCCTCAGGGCCACGTGCAGTGTaGAGATCAGGGCTCCCCACAAACACGAGGCAAACA +
Preference number: 3 (lower is better)
Translates to: GRTEAASGPRAV*RSGLPTNTRQT
Trigger: TGTTTGCCTCGTGTTTGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCTGCTTCTGTCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp CGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTaGTGGACAGCTGCCACTGCTCCGAATGGACCTGGG +
Preference number: 3 (lower is better)
Translates to: RQTDAFAEQGSG*WTAATAPNGPG
Trigger: CCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp CAGACAAGATCTTGGCTCCCCTCAGGGCTAGAGAGATaGAGGAGTGGATCTGGTCTGGAAGGTCCCATTGCA +
Preference number: 3 (lower is better)
Translates to: QTRSWLPSGLER*RSGSGLEGPIA
Trigger: TGCAATGGGACCTTCCAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp CAAACAGATGCATTTGCTGAACAGGGATCTGGCTGGTaGACAGCTGCCACTGCTCCGAATGGACCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: QTDAFAEQGSGW*TAATAPNGPGS
Trigger: TGACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp CCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTaGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAA +
Preference number: 3 (lower is better)
Translates to: PGIRVVLKIFSY*AEHKGRIPISK
Trigger: TTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
3UTR CCA 72 bp TGCAAGGCGATCTGGATGAAGCTGTCTGAAGAGAGGTaGCAGCGTCGGATGAAGCTCTTGCCAAATAGGGAG +
Preference number: 3 (lower is better)
Translates to: CKAIWMKLSEER*QRRMKLLPNRE
Trigger: CTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAGATCGCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR TCA 72 bp CGTGGTGTTGTCCACCCCAGTCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTAAGGAAGGATCCAGCT +
Preference number: 3 (lower is better)
Translates to: RGVVHPSQAATL*SSPSVLRKDPA
Trigger: AGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGACTGGGGTGGACAACACCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp GAACGACATGGCAGTCGACATTTTCAGACAAGATCTTaGCTCCCCTCAGGGCTAGAGAGATGGAGGAGTGGA +
Preference number: 3 (lower is better)
Translates to: ERHGSRHFQTRS*LPSGLERWRSG
Trigger: TCCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCGACTGCCATGTCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR TCA 72 bp ATAACCATGGTCATCAGCAGGCCCGAATCCACCGCCTaGGGAAACATAGTCCGGGTAATTGTGGACGTCAAA +
Preference number: 3 (lower is better)
Translates to: ITMVISRPESTA*GNIVRVIVDVK
Trigger: TTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGCTGATGACCATGGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CCA 72 bp ATGAAGCTCTTGCCAAATAGGGAGAATGGAACGACATaGCAGTCGACATTTTCAGACAAGATCTTGGCTCCC +
Preference number: 3 (lower is better)
Translates to: MKLLPNRENGTT*QSTFSDKILAP
Trigger: GGGAGCCAAGATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTTGCAGCCGCTGGGGCTaGGGTAGTGTGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PRSSRSPRRRGWAGPTPGCSRWG*GSVGSG
Trigger: CCCGGACCCCACACTACCCCAGCCCCAGCGGCTGCA...ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GGGCACGGGCTGGCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGCCAGCGCGAGCTGCCTaGAGAGGCGTGGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: GHGLAWQGALVTEQHRVAPARAA*RGVGVT
Trigger: TGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGG...CGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATGACAGAGGGCACGGGCTaGCGTGGCAGGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SRGYLLAVQAVAVQEEGMTEGTG*RGRERW
Trigger: CCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGT...CATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp CAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QEEGMDGIPSASCLQRRGPRRRG*AGPTPG
Trigger: ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGG...CCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp GGGCACGGGCTGGCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGTCCCATTGCAGCCGCTaGGGCTGGGGTAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GHGLAWQGALVTEQHRVASHCSR*GWGSVG
Trigger: CCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGA...CGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CAGAGCATGGGCGTAGGCATCCAACGACGCTGCCGGGTCCTCCCTGGTGAGCCCGTCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QSMGVGIQRRCRVLPGEPVGGIS*RFRRWR
Trigger: CCGCCACCGCCTGAACCGCCAGGAGATACCCCCGAC...GGGCTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCCTACGCCCATGCTCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GGGCTGGCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGATTGCGCACGGTGTCCTaGACAGAGGGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLAWQGALVTEQHRVAARLRTVS*TEGTGW
Trigger: CCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAA...TCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp ATTCCTGCGCCAGGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGTCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: IPAPGPRSSRSPRRRGWAVGGIS*RFRRWR
Trigger: CCGCCACCGCCTGAACCGCCAGGAGATACCCCCGAC...GGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCTGGCGCAGGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR TCA 90 bp CCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTGTGGGGGCAGGCCGGTaGGGGATCATCCAGGATTCT +
Preference number: 4 (lower is better)
Translates to: PRSSRSPRRRGWAGPTPGVGAGR*GIIQDS
Trigger: AGAATCCTGGATGATCCCTCACCGGCCTGCCCCCAC...ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp GGCCGGACCGACTCCAGGTACTTGCGCACGGTGTCCTGCACAGAGGGCACGGGCGGGCTCAGCATCCAGTaGCACAAAGAAAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: GRTDSRYLRTVSCTEGTGGLSIQ*HKESGP
Trigger: GGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCC...GCCCGTGCCCTCTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp GGGCTGGCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGAGGGCCACGTGCAGTGTaGAGATCAGGGCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: GLAWQGALVTEQHRVAARGPRAV*RSGLPT
Trigger: TGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCC...TCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GCCCCGCGGGCTCAGCATCCAGTGACACAAAGAAAGCGGCCCCTTCCACCGCCTTTGCGCACGGTGTCCTaGACAGAGGGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: APRAQHPVTQRKRPLPPPLRTVS*TEGTGW
Trigger: CCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAA...AGGCGGTGGAAGGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCCGCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTGTGACATAGCACCTGGGCCCACGTaGCCCTGGGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GMDGIPSASCLQRRGCDIAPGPT*PWEQLS
Trigger: TGACAGCTGCTCCCAGGGGCACGTGGGCCCAGGTGC...TATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GCGGTACAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCTCCAGGGCCTCCGCTaGCTGGGTCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: AVQEEGMDGIPSASCLQRLQGLR*LGLQGC
Trigger: ACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGGAG...CCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGGTGGAGGAGGGAAACTaGTCCAGGCTGAGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: QEEGMDGIPSASCLQRRGVEEGN*SRLSCG
Trigger: CCCGCAACTCAGCCTGGACCAGTTTCCCTCCTCCAC...CCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GAGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGCCGGTGAGGGATGGGCACGGGCTGGCGTaGCAGGGAGCGCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: EQLSELPDVPRGGRPVRDGHGLA*QGALVT
Trigger: AGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC...ATCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGACAGAGGGCACGGGCTaGCGTGGCAGGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLTEGTG*RGRERW
Trigger: CCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGT...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTGCGCACGGTGTGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: SPRRRGWAGPTPGTCARCGSAGN*TASGGG
Trigger: GCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCC...ACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR TCA 90 bp ATCCAACGACGCTGCCGGGTCCTCCCTGGTGAGCCCCGCGGGCTCAGCATCCAGGGTGGCAGCGTCGGATaGAGCTCTTGCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: IQRRCRVLPGEPRGLSIQGGSVG*SSCQIG
Trigger: CCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACC...CTGGATGCTGAGCCCGCGGGGCTCACCAGGGAGGACCCGGCAGCGTCGTTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp AGGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCCCGACTCCAGGTACTTaGGCACGGTGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RTAVQSKSSSERMGRTDSPTPGT*ARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG...GGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp AGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATGAGCCTCAGGAATTCCTaGGCCAGGACCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRGYLLAVQAVAVQEEGMSLRNS*ARTAVQ
Trigger: CTGGACCGCGGTCCTGGCGCAGGAATTCCTGAGGCT...CATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp CCGACTCCAGGTACTTGCGCACGGTGTCCTGCACAGAGGGCACGGGCTGGCGTGTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTPGTCARCPAQRARAGVCSSDA*SLRNSC
Trigger: GCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCA...CACGCCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp GGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTGTGACATACCAGCGCGAGCTGCCTaGAGAGGCGTGGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: GMDGIPSASCLQRRGCDIPARAA*RGVGVT
Trigger: TGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGG...TATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGCACCTGGGCCCACGTaGCCCTGGGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLAPGPT*PWEQLS
Trigger: TGACAGCTGCTCCCAGGGGCACGTGGGCCCAGGTGC...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATAGTGTGGGGTCCGGGTaGCCCTTGCAGTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KSGVSPGGSGGGGTGGGHSVGSG*PLQWPS
Trigger: AGACGGCCACTGCAAGGGGCACCCGGACCCCACACT...ATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp ACGTGCCCCTGGGAGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGCTGGTGCTTGTCCACTaGCACGCGGAACAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: TCPWEQLSELPDVPRGGRLVLVH*HAEQGE
Trigger: CTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAG...CCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCTCCCAGGGGCACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GCGGTACAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGGTCAGGAAGGGCGACTaGAGGTGGAGGAATCGGGAC +
Preference number: 4 (lower is better)
Translates to: AVQEEGMDGIPSASCLQRVRKGD*RWRNRD
Trigger: GTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGAC...CCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GGGCTGGCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGACTGAACAGCATCGGGTaGCGGCCAGAGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: GLAWQGALVTEQHRVAARLNSIG*RPEKMR
Trigger: CCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAG...TCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGACAGAGGGCACGGGCTaGCGTGGCAGGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWTEGTG*RGRERW
Trigger: CCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGT...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTGCGCACGGTGTCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPRRRGWAGPTPGTCARCPRRRG*AGPTPG
Trigger: ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGG...ACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp TCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTGCGCACGTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SKSSSERMGRTDSRYLRTWRFRR*RYRRRA
Trigger: TGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCA...CGTGCGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTTGCAGCCGCTGGGGCTaGGGTAGTGTGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPACSRWG*GSVGSG
Trigger: CCCGGACCCCACACTACCCCAGCCCCAGCGGCTGCA...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTGCAGCCGCTGGGGCTaGGGTAGTGTGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVCSRWG*GSVGSG
Trigger: CCCGGACCCCACACTACCCCAGCCCCAGCGGCTGCA...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CGCAGGTACCACTGCAGCAGCGACGCCTGCAGCCTCAGGAATTCCTGCGCCAGGCTCCCTGCCCGCTCATaGCTGCCTTCAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: RRYHCSSDACSLRNSCARLPARS*LPSAEP
Trigger: AGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAG...CCTGGCGCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTTGCTCCGAATGGACCTaGGTCAGGAAGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: PRSSRSPRRRGWAGPTPGCSEWT*VRKGDC
Trigger: GCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCA...ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp AGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATGCAGGGATCTGGCTGGTaGACAGCTGCCACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SRGYLLAVQAVAVQEEGMQGSGW*TAATAP
Trigger: CGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTG...CATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp AAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATCTCCCACATGTGTCCTaGGATGGGGCAGTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: KSGVSPGGSGGGGTGGGHLPHVS*DGAVGP
Trigger: TGGGCCGACTGCCCCATCTCAGGACACATGTGGGAG...ATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp CCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTCCCGAATCCACCGCCTaGGGAAACATAGTCCGGGTA +
Preference number: 4 (lower is better)
Translates to: PRSSRSPRRRGWAGPTPGPESTA*GNIVRV
Trigger: TACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGG...ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLSRRYH*SSDACS
Trigger: GCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCT...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGGGAGTGGGTCCCCATaGGGAAGAATCGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLGSGSP*GRIGPG
Trigger: ACCGGGGCCGATTCTTCCGCATGGGGACCCACTCCC...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGGCATCCAACGACGCTaGCGGGTCCTCCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLGIQRR*RVLPGE
Trigger: CTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCC...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGCAGGCCTCCCTCGTaGAAGACCGCACCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLCRPPS*KTAPSP
Trigger: CGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCA...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGAGAAGATTGCAGGCCTCCCTCGTaGAAGACCGCACCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: AWQGALVTEQHRVAAREDCRPPS*KTAPSP
Trigger: CGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCA...ATCTTCTCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GCCCCGCGGGCTCAGCATCCAGTGACACAAAGAAAGCGGCCCCTTCCACCGCCTTTCAGCAGAGCCTGGTaGTTGTCCACTGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: APRAQHPVTQRKRPLPPPFSRAW*LSTATR
Trigger: CCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAA...AGGCGGTGGAAGGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCCGCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CAGAGCATGGGCGTAGGCATCCAACGACGCTGCCGGGTCCTCCCTGGTGAGCCCTCAGCCATGTCACGCTaGAGCCCTGCTCTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: QSMGVGIQRRCRVLPGEPSAMSR*SPALPR
Trigger: TCTTGGGAGAGCAGGGCTCCAGCGTGACATGGCTGA...GGGCTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCCTACGCCCATGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGGCACGGGCTGGCGTaGCAGGGAGCGCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVGHGLA*QGALVT
Trigger: AGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLPRRRG*AGPTPG
Trigger: ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGG...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CGCAGGTACCACTGCAGCAGCGACGCCTGCAGCCTCAGGAATTCCTGCGCCAGGTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: RRYHCSSDACSLRNSCARYRRRA*TAFPAR
Trigger: TCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTA...CCTGGCGCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp CCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTGTGACATACAGGAAGTCCATCATGGGCCCACGTGCCCCTaGGAGCAGCTGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PSASCLQRRGCDIQEVHHGPTCP*EQLSEL
Trigger: CAGCTCTGACAGCTGCTCCCAGGGGCACGTGGGCCC...ATGATGGACTTCCTGTATGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GGGCTGGCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGAACATGTGTCCTGAGATaGGGCAGTCGGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLAWQGALVTEQHRVAARTCVLR*GSRPRS
Trigger: ACTCCTGGGCCGACTGCCCCATCTCAGGACACATGT...TCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGTCGACGGGCCTTTaGAGTCCTGCCCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCGSTGL*SPAHPE
Trigger: CTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCC...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTGCGCACGGTGTCCTGCCGCTGATCGGATCCTaGGGTCCAAACCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: LVGEDGPDRLQVLAHGVLPLIGS*GPNPSP
Trigger: TGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGG...CAGGACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp CATCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGACGCCCACCAGGACTTaGGCCGCAGGTACCACTGCA +
Preference number: 4 (lower is better)
Translates to: HQQSRGYLLAVQAVAVQETPTRT*AAGTTA
Trigger: TGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGT...CTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR TCA 90 bp GCGGTACAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGGCAGAGGCGTGGGTGTaGCATACAGGAAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: AVQEEGMDGIPSASCLQRAEAWV*HTGSPS
Trigger: TGATGGACTTCCTGTATGTCACACCCACGCCTCTGC...CCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp ATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGCAGCGACGCAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: IIGRPPGLEPQVPLQQRRSRRYH*SSDACS
Trigger: GCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCT...GCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTCCAGCGCGAGCTGCCTaGAGAGGCGTGGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAPARAA*RGVGVT
Trigger: TGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGG...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000598293.6
CDS-3UTR GCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCTCCAGGGCCTCCGCTaGCTGGGTCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLLQGLR*LGLQGC
Trigger: ACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGGAG...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCAGTGTGGGGTCCGGGTaGCCCTTGCAGTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASSVGSG*PLQWPS
Trigger: AGACGGCCACTGCAAGGGGCACCCGGACCCCACACT...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTAGTGTGGGGTCCGGGTaGCCCTTGCAGTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPASVGSG*PLQWPS
Trigger: AGACGGCCACTGCAAGGGGCACCCGGACCCCACACT...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGTGCAGGCCTCCCTCGTaGAAGACCGCACCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWCRPPS*KTAPSP
Trigger: CGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCA...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCTGGTGCTTGTCCACTaGCACGCGGAACAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLLVLVH*HAEQGE
Trigger: CTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAG...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTCTGCCCGCTCATGGCTaGCTTCAGCAGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GPVEVLVGEDGPDRLQVLLPAHG*LQQSLV
Trigger: CACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAG...AAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCPRRRG*AGPTPG
Trigger: ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGG...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GAGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGCCGGTGAGGGATTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: EQLSELPDVPRGGRPVRDYRRRA*TAFPAR
Trigger: TCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTA...ATCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVWRFRR*RYRRRA
Trigger: TGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCA...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTGAAGATCTTCTCGTACTaGGCAGAGCATAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GGGHGRHSQRELPAEAWVKIFSY*AEHKGR
Trigger: GCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTT...CACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp CTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTGCGCACGGTGTCCTGAAGACAGCCACGTGTTaGCTGTCATGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LVGEDGPDRLQVLAHGVLKTATC*LSWRWR
Trigger: CCGCCACCTCCATGACAGCCAACACGTGGCTGTCTT...CAGGACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGCCAGATGTTCCTCGTaGGGGCAGGCCGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWARCSS*GQAGEG
Trigger: TCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGCCAGATGTTCCTCGTaGGGGCAGGCCGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCARCSS*GQAGEG
Trigger: TCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGC...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGGCCCACGTGCCCCTaGGAGCAGCTGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGPTCP*EQLSEL
Trigger: CAGCTCTGACAGCTGCTCCCAGGGGCACGTGGGCCC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGAGGGATGTCCGCACCTaGGCCCACGTGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQRDVRT*AHVPLG
Trigger: TCCCAGGGGCACGTGGGCCCAGGTGCGGACATCCCT...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCAGGGCCTCCGCTGCCTaGGTCTTCAGGGATGTCCGC +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASRASAA*VFRDVR
Trigger: GCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCT...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGCAGCGACGCAGGGCCTCCGCTGCCTaGGTCTTCAGGGATGTCCGC +
Preference number: 4 (lower is better)
Translates to: IIGRPPGLEPQVPLQQRRRASAA*VFRDVR
Trigger: GCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCT...GCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGAGAAGATTCAAACCAGCGATCATaGCCCCGGCCGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AWQGALVTEQHRVAAREDSNQRS*PRPASR
Trigger: TCTGCTGGCCGGCCGGGGCCATGATCGCTGGTTTGA...ATCTTCTCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGGTCGACGGGCCTTTaGAGTCCTGCCCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGSTGL*SPAHPE
Trigger: CTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGTCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQVGGIS*RFRRWR
Trigger: CCGCCACCGCCTGAACCGCCAGGAGATACCCCCGAC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCAGCACAGGGGCACTaGGTTCCACTTCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVAAQGH*VPLQPR
Trigger: ACGGGGCTGAAGTGGAACTCAGTGCCCCTGTGCTGC...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGCAGCACAGGGGCACTaGGTTCCACTTCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWAAQGH*VPLQPR
Trigger: ACGGGGCTGAAGTGGAACTCAGTGCCCCTGTGCTGC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGSAGN*TASGGG
Trigger: GCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTCTCCCACATGTGTCCTaGGATGGGGCAGTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPALPHVS*DGAVGP
Trigger: TGGGCCGACTGCCCCATCTCAGGACACATGTGGGAG...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp AGGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCGCAAGGCGATCTGGATaGAGCTGTCTGAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RTAVQSKSSSERMGRTDSARRSG*SCLKRG
Trigger: ACCTCTCTTCAGACAGCTTCATCCAGATCGCCTTGC...GGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp CAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGATGGCACCAGAAACGTaGGAGATGCCTTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QEEGMDGIPSASCLQRRGMAPET*EMPFPG
Trigger: TCCTGGAAAAGGCATCTCTCACGTTTCTGGTGCCAT...CCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595568.5
CDS-3UTR GCA 90 bp TCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGACCGACTCCAGGTACTTaGGCACGGTGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SAKSGVSPGGSGGGGTGGPTPGT*ARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG...TCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGAGCCTCAGGAATTCCTaGGCCAGGACCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWSLRNS*ARTAVQ
Trigger: CTGGACCGCGGTCCTGGCGCAGGAATTCCTGAGGCT...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCAGCCTCAGGAATTCCTaGGCCAGGACCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASSLRNS*ARTAVQ
Trigger: CTGGACCGCGGTCCTGGCGCAGGAATTCCTGAGGCT...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGCATCCAACGACGCTaGCGGGTCCTCCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGIQRR*RVLPGE
Trigger: CTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTCTGGAAGGTCCCATTaGAGCCGCTGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVSGRSH*SRWGWG
Trigger: ACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGA...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGTCTGGAAGGTCCCATTaGAGCCGCTGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWSGRSH*SRWGWG
Trigger: ACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGA...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTCTGGAAGGTCCCATTaGAGCCGCTGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASSGRSH*SRWGWG
Trigger: ACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGA...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ACGTGCCCCTGGGAGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGTATGTCCAATCCCAGTaGAAGGAGTCCACCACCGGG +
Preference number: 4 (lower is better)
Translates to: TCPWEQLSELPDVPRGGRYVQSQ*KESTTG
Trigger: CCCGGTGGTGGACTCCTTGCACTGGGATTGGACATA...CCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCTCCCAGGGGCACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCTGGTGCTTGTCCACTaGCACGCGGAACAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWLVLVH*HAEQGE
Trigger: CTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAG...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCCTGCCCGCTCATGGCTaGCTTCAGCAGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASLPAHG*LQQSLV
Trigger: CACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAG...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTTGGCGGTCAACTCCCTaGCCGCTCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCWRSTP*PLMAAF
Trigger: GAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCA...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp ATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGCAGCGACGCTGGCGGTCAACTCCCTaGCCGCTCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: IIGRPPGLEPQVPLQQRRWRSTP*PLMAAF
Trigger: GAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCA...GCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTTGGCGGTCAACTCCCTaGCCGCTCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAWRSTP*PLMAAF
Trigger: GAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCA...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGGGGCACGGGCTGGCGTaGCAGGGAGCGCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: SHVLAVMEVADVVFLDPWGHGLA*QGALVT
Trigger: AGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC...CCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp TGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGCATACAGAGGGCACGGGCTaGCGTGGCAGGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: WTPGIRVVLKIFSYWAEHTEGTG*RGRERW
Trigger: CCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGT...ATGCTCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLYRRRA*TAFPAR
Trigger: TCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTA...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTCCTGGTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: WAEHKGRIPISKVGGISWWRFRR*RYRRRA
Trigger: TGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCA...CCAGGAGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGTAAGATCTTCTCGTACTaGGCAGAGCATAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RRRAWTAFPARAACRGVGKIFSY*AEHKGR
Trigger: GCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTT...ACCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTTCAAACCAGCGATCATaGCCCCGGCCGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCSNQRS*PRPASR
Trigger: TCTGCTGGCCGGCCGGGGCCATGATCGCTGGTTTGA...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGTCCCATTGCAGCCGCTaGGGCTGGGGTAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQSHCSR*GWGSVG
Trigger: CCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGA...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCATGGAGGAGTGGATCTaGTCTGGAAGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: RTAVQSKSSSERMGRTDSMEEWI*SGRSHC
Trigger: GCAATGGGACCTTCCAGACCAGATCCACTCCTCCAT...GGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCCGCTGATCGGATCCTaGGGTCCAAACCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLPLIGS*GPNPSP
Trigger: TGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGG...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCCCCTGTCCCGGAAGTaGGCCAGTTGCAAGGCGATC +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWPLSRK*ASCKAI
Trigger: GATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGG...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCTCCCTGCCCGCTCATaGCTGCCTTCAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWLPARS*LPSAEP
Trigger: AGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAG...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCCAGGGATCTGGCTGGTaGACAGCTGCCACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASQGSGW*TAATAP
Trigger: CGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTG...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTCAGGGATCTGGCTGGTaGACAGCTGCCACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAQGSGW*TAATAP
Trigger: CGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTG...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCACCAGGCAAGCTGGATaGCACCAGAAACGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: RTAVQSKSSSERMGRTDSTRQAG*HQKRER
Trigger: TCTCTCACGTTTCTGGTGCCATCCAGCTTGCCTGGT...GGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595568.5
CDS-3UTR TCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGTGGGGGCAGGCCGGTaGGGGATCATCCAGGATTCT +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQVGAGR*GIIQDS
Trigger: AGAATCCTGGATGATCCCTCACCGGCCTGCCCCCAC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGCAGTGGCCGTCTGTTaGGTAGCCCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLAVAVC*VAQLKA
Trigger: TGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGC...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCTGGATGAAGCTGTCTaGAGAGAGGTGGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLLDEAV*REVAAS
Trigger: CGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAG...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTTGTCCTCCATGGCCCTaGCAAAGTTGCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCCPPWP*QSCRPP
Trigger: GGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACA...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTCCTCCATGGCCCTaGCAAAGTTGCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASCPPWP*QSCRPP
Trigger: GGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACA...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGAGTTCTCCTTCCCTaGCCCTCTGAACCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAGVLLP*PSEPAL
Trigger: AAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CCGACTCCAGGTACTTGCGCACGGTGTCCTGCACAGAGGGCACGGGCTGGCGTGAGTTCAGGGATGAAGTaGGCTGTGATGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: PTPGTCARCPAQRARAGVSSGMK*AVMVTL
Trigger: CAGTGTCACCATCACAGCTCACTTCATCCCTGAACT...CACGCCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGCCGACTCCAGGTACTTaGGCACGGTGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVPTPGT*ARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASCSSDA*SLRNSC
Trigger: GCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCA...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGGGGAGTGGGTCCCCATaGGGAAGAATCGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SHVLAVMEVADVVFLDPWGSGSP*GRIGPG
Trigger: ACCGGGGCCGATTCTTCCGCATGGGGACCCACTCCC...CCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGCACCTGGGCCCACGTaGCCCTGGGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGAPGPT*PWEQLS
Trigger: TGACAGCTGCTCCCAGGGGCACGTGGGCCCAGGTGC...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGTCCGGGTGCCCCTTaGAGTGGCCGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGPGAP*SGRLLS
Trigger: ACTCAACAGACGGCCACTGCAAGGGGCACCCGGACC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCGACTCCAGGTACTTGCGCACGGTGTCCTGCACAGAGGGCACGGGCTGGCGTGCCCAAATCTCCCGCTTaGATATGTCCAATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTPGTCARCPAQRARAGVPKSPA*ICPIPV
Trigger: CACTGGGATTGGACATATGCAAGCGGGAGATTTGGG...CACGCCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTTCAGCAGAGCCTGGTaGTTGTCCACTGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVFSRAW*LSTATR
Trigger: CCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAA...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTCAGGAAGGGCGACTaGAGGTGGAGGAATCGGGAC +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAVRKGD*RWRNRD
Trigger: GTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGAC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTCAGGAAGGGCGACTaGAGGTGGAGGAATCGGGAC +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCVRKGD*RWRNRD
Trigger: GTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGAC...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGACAGCTGCCACTaGTCCGAATGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAVDSCH*SEWTWV
Trigger: GACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCAC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGTGGCTGGTGGACAGCTaGCACTGCTCCGAATGGACC +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWWLVDS*HCSEWT
Trigger: GGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCGTCCTCAATGTGCTaGCCCAGCCTGTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVASSMC*PSLWES
Trigger: GGATTCCCACAGGCTGGGGCAGCACATTGAGGACGC...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGCCACATCCAGCAGTaGGTCCTCAATGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVGHIQQ*VLNVLP
Trigger: GGGCAGCACATTGAGGACGCACTGCTGGATGTGGCC...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCTTGGAGAGGCCAGCTaGCTGCTGGAAGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLLGEAS*LLEGVR
Trigger: TCTGACTCCTTCCAGCAGGCAGCTGGCCTCTCCAAG...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQRKPTA*CASAMS
Trigger: TGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCG...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTCTGAACAGCATCGGGTaGCGGCCAGAGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCLNSIG*RPEKMR
Trigger: CCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAG...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGGGCACGGGCTGGCGTaGCAGGGAGCGCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPGHGLA*QGALVT
Trigger: AGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGGGCACGGGCTGGCGTaGCAGGGAGCGCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPGHGLA*QGALVT
Trigger: AGTTACCAGCGCTCCCTGCCACGCCAGCCCGTGCCC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTACAGAGGGCACGGGCTaGCGTGGCAGGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCTEGTG*RGRERW
Trigger: CCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGT...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGACAGAGGGCACGGGCTaGCGTGGCAGGGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLTEGTG*RGRERW
Trigger: CCAGCGCTCCCTGCCACGCCAGCCCGTGCCCTCTGT...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCCATCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGCTGTTTCGGGAGTaGGTCCCCATGCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PISKVGGISWRFRRWRYRRLFRE*VPMRKN
Trigger: ATTCTTCCGCATGGGGACCCACTCCCGAAACAGCCT...CCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGGCCCACGTGCCCCTaGGAGCAGCTGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQGPTCP*EQLSEL
Trigger: CAGCTCTGACAGCTGCTCCCAGGGGCACGTGGGCCC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGGGCCCACGTGCCCCTaGGAGCAGCTGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPGPTCP*EQLSEL
Trigger: CAGCTCTGACAGCTGCTCCCAGGGGCACGTGGGCCC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCAGGGATGTCCGCACCTaGGCCCACGTGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSRDVRT*AHVPLG
Trigger: TCCCAGGGGCACGTGGGCCCAGGTGCGGACATCCCT...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGACATGTGTCCTGAGATaGGGCAGTCGGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLTCVLR*GSRPRS
Trigger: ACTCCTGGGCCGACTGCCCCATCTCAGGACACATGT...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTGCAGCCGCTGGGGCTaGGGTAGTGTGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCCSRWG*GSVGSG
Trigger: CCCGGACCCCACACTACCCCAGCCCCAGCGGCTGCA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGCAGCCGCTGGGGCTaGGGTAGTGTGGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLCSRWG*GSVGSG
Trigger: CCCGGACCCCACACTACCCCAGCCCCAGCGGCTGCA...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGGAGTGGATCTGGTCTaGAAGGTCCCATTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLGVDLV*KVPLQP
Trigger: CGGCTGCAATGGGACCTTCCAGACCAGATCCACTCC...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGGGTCGACGGGCCTTTaGAGTCCTGCCCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPGSTGL*SPAHPE
Trigger: CTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCGGGTCGACGGGCCTTTaGAGTCCTGCCCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSGSTGL*SPAHPE
Trigger: CTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCC...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTCCGCTGATCGGATCCTaGGGTCCAAACCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCPLIGS*GPNPSP
Trigger: TGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGG...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTGGTGGGGGAGGACATaGCTCCGTGGGGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVWWGRT*LRGAQE
Trigger: TTCTTGAGCCCCACGGAGCCATGTCCTCCCCCACCA...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGTGGTGGGGGAGGACATaGCTCCGTGGGGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWWWGRT*LRGAQE
Trigger: TTCTTGAGCCCCACGGAGCCATGTCCTCCCCCACCA...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGTCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQVGGIS*RFRRWR
Trigger: CCGCCACCGCCTGAACCGCCAGGAGATACCCCCGAC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTCAGGGCGAGGCACTGTaGGTCCGTCTTCTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GPVEVLVGEDGPDRLQVLQGEAL*VRLLFV
Trigger: GACAAAGAGAAGACGGACCCACAGTGCCTCGCCCTG...AAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGTGCTCCGAATGGACCTaGGTCAGGAAGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWCSEWT*VRKGDC
Trigger: GCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCA...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CAGAGCATGGGCGTAGGCATCCAACGACGCTGCCGGGTCCTCCCTGGTGAGCCCCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: QSMGVGIQRRCRVLPGEPQAATL*SSPSVL
Trigger: TAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTG...GGGCTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCCTACGCCCATGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGGSAGN*TASGGG
Trigger: GCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCC...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTACGCCCACCAGGACTTaGGCCGCAGGTACCACTGCA +
Preference number: 4 (lower is better)
Translates to: RTGQSIRGAFPSAKSGVSTPTRT*AAGTTA
Trigger: TGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGT...AGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR TCA 90 bp CCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTGCGGAATCCGCGTGGTGTTaGAGATCTTCTCGTACTGGG +
Preference number: 4 (lower is better)
Translates to: PVEVLVGEDGPDRLQVLAESAWC*RSSRTG
Trigger: CCCAGTACGAGAAGATCTTCAACACCACGCGGATTC...CGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR TCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCTGGATGAAGCTGTCTaGAGAGAGGTGGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWLDEAV*REVAAS
Trigger: CGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAG...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAESRVR*SDPGVQ
Trigger: TTGGACCCCAGGATCCGATCAGCGGACCCTTGATTC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CCTCAGGGCCACGTGCAGTGTGAAGATCAGGGCTCCCCACAAACACGAGGCAAATGTCCTCCATGGCCCTaGCAAAGTTGCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PQGHVQCEDQGSPQTRGKCPPWP*QSCRPP
Trigger: GGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACA...TTTGCCTCGTGTTTGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTTCGGGACCTCACGTTaGATCAAGGGTCCGCTGATC +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLFGTSR*IKGPLI
Trigger: GATCAGCGGACCCTTGATTCAACGTGAGGTCCCGAA...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp GCCCCGCGGGCTCAGCATCCAGTGACACAAAGAAAGCGGCCCCTTCCACCGCCTAAGACCCCAGAAACGTaGGAGATGCCTTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: APRAQHPVTQRKRPLPPPKTPET*EMPFPG
Trigger: TCCTGGAAAAGGCATCTCTCACGTTTCTGGGGTCTT...AGGCGGTGGAAGGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCCGCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTTGCGCACGGTGTCCTaGACAGAGGGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPLRTVS*TEGTGW
Trigger: CCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAA...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCCGACTCCAGGTACTTaGGCACGGTGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQPTPGT*ARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGSRRYH*SSDACS
Trigger: GCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCT...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSSRRYH*SSDACS
Trigger: GCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCT...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPSRRYH*SSDACS
Trigger: GCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCT...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CTGTTCACCATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAGAGCCGCAGGTACCACTaGAGCAGCGACGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFTISGFRERRYTNSSHQSRRYH*SSDACS
Trigger: GCTGCAGGCGTCGCTGCTGCAGTGGTACCTGCGGCT...CTGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATGGTGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGGGAGTGGGTCCCCATaGGGAAGAATCGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRGSGSP*GRIGPG
Trigger: ACCGGGGCCGATTCTTCCGCATGGGGACCCACTCCC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGAGCAGCTGTCAGAGCTaGCAGATGTTCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVSSCQS*QMFLVG
Trigger: CCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCT...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTGCACCTGGGCCCACGTaGCCCTGGGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCAPGPT*PWEQLS
Trigger: TGACAGCTGCTCCCAGGGGCACGTGGGCCCAGGTGC...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCGCACCTGGGCCCACGTaGCCCTGGGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVAPGPT*PWEQLS
Trigger: TGACAGCTGCTCCCAGGGGCACGTGGGCCCAGGTGC...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTAGCCTCAGGGCCACGTaGAGTGTGAAGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCSLRAT*SVKIRA
Trigger: AGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCT...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGTTCAGCAGAGCCTGGTaGTTGTCCACTGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQFSRAW*LSTATR
Trigger: CCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAA...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGAGTGCGTCCTCAATGTaGTGCCCCAGCCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVSASSM*CPSLWE
Trigger: TTCCCACAGGCTGGGGCAGCACATTGAGGACGCACT...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGAGAGGCCAGCTGCCTaGTGGAAGGAGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWERPAA*WKESEV
Trigger: GACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTCTC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCTTGGAGAGGCCAGCTaGCTGCTGGAAGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWLGEAS*LLEGVR
Trigger: TCTGACTCCTTCCAGCAGGCAGCTGGCCTCTCCAAG...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGTTGCCAAACCAGTTaGCCCTGTCCTGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAGCQTS*PCPVSA
Trigger: GGCTGACACAGGACAGGGGCAACTGGTTTGGCAACC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGCCTGGATGTGGGGTTaGCAAACCAGTTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWAWMWG*QTSCPC
Trigger: ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTAAGGAAGGATCCAGCTaGAGGAACCAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPVEVLVGEDGPDRLQVLKEGSS*RNQASW
Trigger: CCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTT...AAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRPRRRG*AGPTPG
Trigger: ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGG...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRWRFRR*RYRRRA
Trigger: TGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCA...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCAAGACAGCCACGTGTTaGCTGTCATGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASKTATC*LSWRWR
Trigger: CCGCCACCTCCATGACAGCCAACACGTGGCTGTCTT...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTAAGAATCGGCCCCGGTaGAAGACAGCCACGTGTTGG +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAKNRPR*KTATCW
Trigger: CCAACACGTGGCTGTCTTCCACCGGGGCCGATTCTT...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGAGGCTGTTTCGGGAGTaGGTCCCCATGCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLRLFRE*VPMRKN
Trigger: ATTCTTCCGCATGGGGACCCACTCCCGAAACAGCCT...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGCCAGATGTTCCTCGTaGGGGCAGGCCGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPARCSS*GQAGEG
Trigger: TCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAGTCACTGACGCCAGATGTTCCTCGTaGGGGCAGGCCGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HQRISGAQVHKFLPPVTDARCSS*GQAGEG
Trigger: TCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGC...GTCAGTGACTGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGGGCCCACGTGCCCCTaGGAGCAGCTGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCGPTCP*EQLSEL
Trigger: CAGCTCTGACAGCTGCTCCCAGGGGCACGTGGGCCC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCGGGCCCACGTGCCCCTaGGAGCAGCTGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSGPTCP*EQLSEL
Trigger: CAGCTCTGACAGCTGCTCCCAGGGGCACGTGGGCCC...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTAGGGATGTCCGCACCTaGGCCCACGTGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCRDVRT*AHVPLG
Trigger: TCCCAGGGGCACGTGGGCCCAGGTGCGGACATCCCT...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAGGGATGTCCGCACCTaGGCCCACGTGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPRDVRT*AHVPLG
Trigger: TCCCAGGGGCACGTGGGCCCAGGTGCGGACATCCCT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCAGGGATGTCCGCACCTaGGCCCACGTGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSRDVRT*AHVPLG
Trigger: TCCCAGGGGCACGTGGGCCCAGGTGCGGACATCCCT...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGAGGGCCTCCGCTGCCTaGGTCTTCAGGGATGTCCGC +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQRASAA*VFRDVR
Trigger: GCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCT...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTACATGTGTCCTGAGATaGGGCAGTCGGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCTCVLR*GSRPRS
Trigger: ACTCCTGGGCCGACTGCCCCATCTCAGGACACATGT...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTACATGTGTCCTGAGATaGGGCAGTCGGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPATCVLR*GSRPRS
Trigger: ACTCCTGGGCCGACTGCCCCATCTCAGGACACATGT...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTCCCATTGCAGCCGCTaGGGCTGGGGTAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPSHCSR*GWGSVG
Trigger: CCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGA...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGGAGTGGATCTGGTCTaGAAGGTCCCATTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWGVDLV*KVPLQP
Trigger: CGGCTGCAATGGGACCTTCCAGACCAGATCCACTCC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTGCGCACGGTGTAGAGAGATGGAGGAGTaGATCTGGTCTGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SPRRRGWAGPTPGTCARCREMEE*IWSGRS
Trigger: GGACCTTCCAGACCAGATCCACTCCTCCATCTCTCT...ACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GAAGACAGCCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACGGGTCGACGGGCCTTTaGAGTCCTGCCCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: EDSHVLAVMEVADVVFLDGSTGL*SPAHPE
Trigger: CTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCC...GTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGGCTGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGTGGTGGGGGAGGACATaGCTCCGTGGGGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQWWGRT*LRGAQE
Trigger: TTCTTGAGCCCCACGGAGCCATGTCCTCCCCCACCA...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPVGGIS*RFRRWR
Trigger: CCGCCACCGCCTGAACCGCCAGGAGATACCCCCGAC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGTACAGCGCAAACAGGTaGCGGTCAACTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQYSANR*RSTPCP
Trigger: CGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTA...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTAAATGCTGTCCCGCCTaGAACAGGGAGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCKCCPA*NREATS
Trigger: GGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTT...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGAGGCCAGCTGCCTGCTaGAAGGAGTCAGAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWRPAAC*KESEVG
Trigger: ACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCT...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGCAGCACAGGGGCACTaGGTTCCACTTCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGAAQGH*VPLQPR
Trigger: ACGGGGCTGAAGTGGAACTCAGTGCCCCTGTGCTGC...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGCATGCAGCACAGGGGCACTaGGTTCCACTTCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: WTPGIRVVLKIFSYWAEHAAQGH*VPLQPR
Trigger: ACGGGGCTGAAGTGGAACTCAGTGCCCCTGTGCTGC...ATGCTCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR TCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCGSAGN*TASGGG
Trigger: GCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGGGAGCGCTGGTAACTaGACAGCATCGGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLGSAGN*TASGGG
Trigger: GCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGACGCCCACCAGGACTTaGGCCGCAGGTACCACTGCA +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRTPTRT*AAGTTA
Trigger: TGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGTGGGGGCAGGCCGGTaGGGGATCATCCAGGATTCT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRVGAGR*GIIQDS
Trigger: AGAATCCTGGATGATCCCTCACCGGCCTGCCCCCAC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGTGGGGGCAGGCCGGTaGGGGATCATCCAGGATTCT +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQVGAGR*GIIQDS
Trigger: AGAATCCTGGATGATCCCTCACCGGCCTGCCCCCAC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGCAGTGGCCGTCTGTTaGGTAGCCCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQAVAVC*VAQLKA
Trigger: TGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp GACTGCAGGTGGAGGAATCGGGACACGATGTACAGCGCAAACAGGTGGCGGTCAGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: DCRWRNRDTMYSANRWRSESRVR*SDPGVQ
Trigger: TTGGACCCCAGGATCCGATCAGCGGACCCTTGATTC...TGACCGCCACCTGTTTGCGCTGTACATCGTGTCCCGATTCCTCCACCTGCAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQESRVR*SDPGVQ
Trigger: TTGGACCCCAGGATCCGATCAGCGGACCCTTGATTC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTTTCGGGACCTCACGTTaGATCAAGGGTCCGCTGATC +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCFGTSR*IKGPLI
Trigger: GATCAGCGGACCCTTGATTCAACGTGAGGTCCCGAA...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGTCACGCTGGAGCCCTaGAGGGTCTTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPVTLEP*RVLRVL
Trigger: CAGGACCCTCAAGACCCTTCAGGGCTCCAGCGTGAC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCATTGCGCACGGTGTCCTaGACAGAGGGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSLRTVS*TEGTGW
Trigger: CCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAA...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTTGCGCACGGTGTCCTaGACAGAGGGCACGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVLRTVS*TEGTGW
Trigger: CCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAA...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAAGCCTCAGGAATTCCTaGGCCAGGACCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGSLRNS*ARTAVQ
Trigger: CTGGACCGCGGTCCTGGCGCAGGAATTCCTGAGGCT...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GGCCGGACCGACTCCAGGTACTTGCGCACGGTGTCCTGCACAGAGGGCACGGGCCCATCATGTAATAGTTaGTGTTCACCATCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: GRTDSRYLRTVSCTEGTGPSCNS*CSPSAD
Trigger: ATCCGCTGATGGTGAACAGCAACTATTACATGATGG...GCCCGTGCCCTCTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGTCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGCCAGCGCGAGCTGCCTaGAGAGGCGTGGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVPARAA*RGVGVT
Trigger: TGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGG...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000598293.6
CDS-3UTR GCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTCCAGCGCGAGCTGCCTaGAGAGGCGTGGGTGTGACA +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCPARAA*RGVGVT
Trigger: TGTCACACCCACGCCTCTGCAGGCAGCTCGCGCTGG...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000598293.6
CDS-3UTR GCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGGAGTGGGTCCCCATaGGGAAGAATCGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPGSGSP*GRIGPG
Trigger: ACCGGGGCCGATTCTTCCGCATGGGGACCCACTCCC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGGAGTGGGTCCCCATaGGGAAGAATCGGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPGSGSP*GRIGPG
Trigger: ACCGGGGCCGATTCTTCCGCATGGGGACCCACTCCC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCCTCCAGGGCCTCCGCTaGCTGGGTCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPLQGLR*LGLQGC
Trigger: ACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGGAG...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCGGCATCCAACGACGCTaGCGGGTCCTCCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVGIQRR*RVLPGE
Trigger: CTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCC...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGGCATCCAACGACGCTaGCGGGTCCTCCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVGIQRR*RVLPGE
Trigger: CTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCC...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGCATCCAACGACGCTaGCGGGTCCTCCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPGIQRR*RVLPGE
Trigger: CTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCGGTCCGGGTGCCCCTTaGAGTGGCCGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSGPGAP*SGRLLS
Trigger: ACTCAACAGACGGCCACTGCAAGGGGCACCCGGACC...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGGTCCGGGTGCCCCTTaGAGTGGCCGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRGPGAP*SGRLLS
Trigger: ACTCAACAGACGGCCACTGCAAGGGGCACCCGGACC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTAGTGTGGGGTCCGGGTaGCCCTTGCAGTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCSVGSG*PLQWPS
Trigger: AGACGGCCACTGCAAGGGGCACCCGGACCCCACACT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGAGTGTGGGGTCCGGGTaGCCCTTGCAGTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLSVGSG*PLQWPS
Trigger: AGACGGCCACTGCAAGGGGCACCCGGACCCCACACT...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAGTGTGGGGTCCGGGTaGCCCTTGCAGTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPSVGSG*PLQWPS
Trigger: AGACGGCCACTGCAAGGGGCACCCGGACCCCACACT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTCTGGAAGGTCCCATTaGAGCCGCTGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPSGRSH*SRWGWG
Trigger: ACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGA...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTATGTCCAATCCCAGTaGAAGGAGTCCACCACCGGG +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVYVQSQ*KESTTG
Trigger: CCCGGTGGTGGACTCCTTGCACTGGGATTGGACATA...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTATGTCCAATCCCAGTaGAAGGAGTCCACCACCGGG +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASYVQSQ*KESTTG
Trigger: CCCGGTGGTGGACTCCTTGCACTGGGATTGGACATA...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTGCAGGCCTCCCTCGTaGAAGACCGCACCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCCRPPS*KTAPSP
Trigger: CGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCTGCAGGCCTCCCTCGTaGAAGACCGCACCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVCRPPS*KTAPSP
Trigger: CGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCA...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCATGCAGGCCTCCCTCGTaGAAGACCGCACCGTCTCCG +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSCRPPS*KTAPSP
Trigger: CGGAGACGGTGCGGTCTTGCACGAGGGAGGCCTGCA...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGCTGGTGCTTGTCCACTaGCACGCGGAACAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRLVLVH*HAEQGE
Trigger: CTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAG...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTGGCGGTCAACTCCCTaGCCGCTCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPWRSTP*PLMAAF
Trigger: GAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGTGGCTGGTGGACAGCTaGCACTGCTCCGAATGGACC +
Preference number: 4 (lower is better)
Translates to: SHVLAVMEVADVVFLDPWWLVDS*HCSEWT
Trigger: GGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA...CCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGAGTGCGTCCTCAATGTaGTGCCCCAGCCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQSASSM*CPSLWE
Trigger: TTCCCACAGGCTGGGGCAGCACATTGAGGACGCACT...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGCCTGGATGTGGGGTTaGCAAACCAGTTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQAWMWG*QTSCPC
Trigger: ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGGGGGTATCTCCTGGAGATTCGGGGGTGGGTaGAGGAGGGAAACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: WAEHKGRIPISKVGGISWRFGGG*RRETGP
Trigger: TGGACCAGTTTCCCTCCTCCACCCACCCCCGAATCT...CCAGGAGATACCCCCGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAGTCACTGACGCTCTCCCAAGAACATaGTGCGGGGGCAGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HQRISGAQVHKFLPPVTDALPRT*CGGSAL
Trigger: GAGGGCACTGCCCCCGCACCATGTTCTTGGGAGAGC...GTCAGTGACTGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPRKPTA*CASAMS
Trigger: TGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCG...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAACGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: PRVGCHGGGGCSLFGPLERKPTA*CASAMS
Trigger: TGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCG...TTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRRKPTA*CASAMS
Trigger: TGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCG...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGAAGGAAGGATCCAGCTaGAGGAACCAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWKEGSS*RNQASW
Trigger: CCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTT...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGCAGCGACGCAAGGAAGGATCCAGCTaGAGGAACCAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IIGRPPGLEPQVPLQQRRKEGSS*RNQASW
Trigger: CCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTT...GCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AGCCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGCTGAACAGCATCGGGTaGCGGCCAGAGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: SHVLAVMEVADVVFLDPWLNSIG*RPEKMR
Trigger: CCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAG...CCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCPRRRG*AGPTPG
Trigger: ACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGG...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVWRFRR*RYRRRA
Trigger: TGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCA...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGAAGATCTTCTCGTACTaGGCAGAGCATAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLKIFSY*AEHKGR
Trigger: GCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTT...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGCCAGATGTTCCTCGTaGGGGCAGGCCGGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCARCSS*GQAGEG
Trigger: TCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTAGGGATGTCCGCACCTaGGCCCACGTGCCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VADVVFLDPWNPRGVEDLRDVRT*AHVPLG
Trigger: TCCCAGGGGCACGTGGGCCCAGGTGCGGACATCCCT...AAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAGGGCCTCCGCTGCCTaGGTCTTCAGGGATGTCCGC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPRASAA*VFRDVR
Trigger: GCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCAGGGCCTCCGCTGCCTaGGTCTTCAGGGATGTCCGC +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSRASAA*VFRDVR
Trigger: GCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCT...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTCCCATTGCAGCCGCTaGGGCTGGGGTAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSSHCSR*GWGSVG
Trigger: CCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGA...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCATCCCATTGCAGCCGCTaGGGCTGGGGTAGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSSHCSR*GWGSVG
Trigger: CCCCACACTACCCCAGCCCCAGCGGCTGCAATGGGA...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGAGTGGATCTGGTCTaGAAGGTCCCATTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGVDLV*KVPLQP
Trigger: CGGCTGCAATGGGACCTTCCAGACCAGATCCACTCC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGGAGTGCTCCACGCTGAGGCCCAGCTTCCCGTTAGAGAAGACGATTAGGGTGGGAGTGGATCTGGTCTaGAAGGTCCCATTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: QECSTLRPSFPLEKTIRVGVDLV*KVPLQP
Trigger: CGGCTGCAATGGGACCTTCCAGACCAGATCCACTCC...CACCCTAATCGTCTTCTCTAACGGGAAGCTGGGCCTCAGCGTGGAGCACTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GGGCTGGCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGAGAGAATGGAACGACATaGCAGTCGACATTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: GLAWQGALVTEQHRVAARENGTT*QSTFSD
Trigger: GTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTC...TCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGCTGTCTGAAGAGAGGTaGCAGCGTCGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVLSEER*QRRMKL
Trigger: GAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCCCCCTGTCCCGGAAGTaGGCCAGTTGCAAGGCGATC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPPLSRK*ASCKAI
Trigger: GATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGG...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
59% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGCCCCTGTCCCGGAAGTaGGCCAGTTGCAAGGCGATC +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRPLSRK*ASCKAI
Trigger: GATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGG...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCCCCTGTCCCGGAAGTaGGCCAGTTGCAAGGCGATC +
Preference number: 4 (lower is better)
Translates to: VLAVMEVADVVFLDPWNPPLSRK*ASCKAI
Trigger: GATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGG...CGGATTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCTCCCTGCCCGCTCATaGCTGCCTTCAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQLPARS*LPSAEP
Trigger: AGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAG...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCGCAGCACAGGGGCACTaGGTTCCACTTCAGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFAAQGH*VPLQPR
Trigger: ACGGGGCTGAAGTGGAACTCAGTGCCCCTGTGCTGC...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000594038.5
ENST00000596922.5
ENST00000598259.5
CDS-3UTR TCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGACGCCCACCAGGACTTaGGCCGCAGGTACCACTGCA +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLTPTRT*AAGTTA
Trigger: TGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGT...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTACGCCCACCAGGACTTaGGCCGCAGGTACCACTGCA +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCTPTRT*AAGTTA
Trigger: TGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGT...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAACGCCCACCAGGACTTaGGCCGCAGGTACCACTGCA +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSTPTRT*AAGTTA
Trigger: TGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGCAGAGGCGTGGGTGTaGCATACAGGAAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQAEAWV*HTGSPS
Trigger: TGATGGACTTCCTGTATGTCACACCCACGCCTCTGC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000598293.6
CDS-3UTR TCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGAATCCGCGTGGTGTTaGAGATCTTCTCGTACTGGG +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVESAWC*RSSRTG
Trigger: CCCAGTACGAGAAGATCTTCAACACCACGCGGATTC...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGTCATCCAGGATTCTCTaGAACTGCTGCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWSSRIL*NCCSRA
Trigger: AGCCCTGGAGCAGCAGTTTCAGAGAATCCTGGATGA...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCGGGCTCAGCATCCAGTaGCACAAAGAAAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSGLSIQ*HKESGP
Trigger: GGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCC...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGGGCTCAGCATCCAGTaGCACAAAGAAAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPGLSIQ*HKESGP
Trigger: GGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp GCCCCGCGGGCTCAGCATCCAGTGACACAAAGAAAGCGGCCCCTTCCACCGCCTAGAAGACGATTAGGGTaGAGGATTTGTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: APRAQHPVTQRKRPLPPPRRRLG*RICQTS
Trigger: GCTGGTTTGACAAATCCTTCACCCTAATCGTCTTCT...AGGCGGTGGAAGGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCCGCGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCCTCCCACATGTGTCCTaGGATGGGGCAGTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVLPHVS*DGAVGP
Trigger: TGGGCCGACTGCCCCATCTCAGGACACATGTGGGAG...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTCTCCCACATGTGTCCTaGGATGGGGCAGTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPLPHVS*DGAVGP
Trigger: TGGGCCGACTGCCCCATCTCAGGACACATGTGGGAG...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTCCCACATGTGTCCTaGGATGGGGCAGTCGGCCCA +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVLPHVS*DGAVGP
Trigger: TGGGCCGACTGCCCCATCTCAGGACACATGTGGGAG...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCAAGGCGATCTGGATaGAGCTGTCTGAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAARRSG*SCLKRG
Trigger: ACCTCTCTTCAGACAGCTTCATCCAGATCGCCTTGC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGACGCTGGAGCCCACGTTaGATCAAGGGTCCGCTGATC +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGRWSPR*IKGPLI
Trigger: GATCAGCGGACCCTTGATTCAACGTGGGCTCCAGCG...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323446.9
CDS-3UTR TCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGGGCCACGTGCAGTGTaGAGATCAGGGCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCGPRAV*RSGLPT
Trigger: TGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCGGGCCACGTGCAGTGTaGAGATCAGGGCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVGPRAV*RSGLPT
Trigger: TGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCC...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGGGCCACGTGCAGTGTaGAGATCAGGGCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLGPRAV*RSGLPT
Trigger: TGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGGCCACGTGCAGTGTaGAGATCAGGGCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPGPRAV*RSGLPT
Trigger: TGTGGGGAGCCCTGATCTTCACACTGCACGTGGCCC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTGTCCTCCATGGCCCTaGCAAAGTTGCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPCPPWP*QSCRPP
Trigger: GGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGTGTCCTCCATGGCCCTaGCAAAGTTGCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQCPPWP*QSCRPP
Trigger: GGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACA...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGGAGTTCTCCTTCCCTaGCCCTCTGAACCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRGVLLP*PSEPAL
Trigger: AAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGTCGGTGGATGTCATTaGGGCCTTGGAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRVGGCH*GLGGPS
Trigger: ACTGGGGCCTCCAAGGCCTCAATGACATCCACCGAC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGTCGGTGGATGTCATTaGGGCCTTGGAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPVGGCH*GLGGPS
Trigger: ACTGGGGCCTCCAAGGCCTCAATGACATCCACCGAC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGTCGGTGGATGTCATTaGGGCCTTGGAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQVGGCH*GLGGPS
Trigger: ACTGGGGCCTCCAAGGCCTCAATGACATCCACCGAC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCCTTCTCTAAGCACCTaGAGGGTCTTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQPSLST*RVLRVL
Trigger: CAGGACCCTCAAGACCCTTCAGGTGCTTAGAGAAGG...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392518.8
CDS-3UTR TCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGTCACGCTGGAGCCCTaGAGGGTCTTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSVTLEP*RVLRVL
Trigger: CAGGACCCTCAAGACCCTTCAGGGCTCCAGCGTGAC...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCGTCACGCTGGAGCCCTaGAGGGTCTTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFVTLEP*RVLRVL
Trigger: CAGGACCCTCAAGACCCTTCAGGGCTCCAGCGTGAC...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594038.5
CDS-3UTR GCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCGACTCCAGGTACTTaGGCACGGTGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQPTPGT*ARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGACCGACTCCAGGTACTTaGGCACGGTGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGPTPGT*ARCPAQ
Trigger: CTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTAGCCTCAGGAATTCCTaGGCCAGGACCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPSLRNS*ARTAVQ
Trigger: CTGGACCGCGGTCCTGGCGCAGGAATTCCTGAGGCT...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPCSSDA*SLRNSC
Trigger: GCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCA...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTCCAGGGCCTCCGCTaGCTGGGTCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCLQGLR*LGLQGC
Trigger: ACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGGAG...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCTCCAGGGCCTCCGCTaGCTGGGTCTTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSLQGLR*LGLQGC
Trigger: ACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGGAG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGTCCGGGTGCCCCTTaGAGTGGCCGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPGPGAP*SGRLLS
Trigger: ACTCAACAGACGGCCACTGCAAGGGGCACCCGGACC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCGGTCCGGGTGCCCCTTaGAGTGGCCGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFGPGAP*SGRLLS
Trigger: ACTCAACAGACGGCCACTGCAAGGGGCACCCGGACC...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGGTCCGGGTGCCCCTTaGAGTGGCCGTCTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVGPGAP*SGRLLS
Trigger: ACTCAACAGACGGCCACTGCAAGGGGCACCCGGACC...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTCTGGAAGGTCCCATTaGAGCCGCTGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCSGRSH*SRWGWG
Trigger: ACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGGGCCTTTGGAGTCCTaGCCACCCCGAGATCACCGT +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCGPLES*PPRDHR
Trigger: ACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCGGGCCTTTGGAGTCCTaGCCACCCCGAGATCACCGT +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSGPLES*PPRDHR
Trigger: ACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCC...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GGAACGACATGGCAGTCGACATTTTCAGACAAGATCTTGGCTCCCCTCAGGGCTGGGCCTTTGGAGTCCTaGCCACCCCGAGATCACCGT +
Preference number: 4 (lower is better)
Translates to: GTTWQSTFSDKILAPLRAGPLES*PPRDHR
Trigger: ACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCC...AGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGCCTTTGGAGTCCTaGCCACCCCGAGATCACCGT +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSGPLES*PPRDHR
Trigger: ACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCC...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCTGGTGCTTGTCCACTaGCACGCGGAACAGGGCGAG +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSLVLVH*HAEQGE
Trigger: CTCGCCCTGTTCCGCGTGGCAGTGGACAAGCACCAG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCTTCAGCAGAGCCTGGTaGTTGTCCACTGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSFSRAW*LSTATR
Trigger: CCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAA...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCTGCCCGCTCATGGCTaGCTTCAGCAGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLLPAHG*LQQSLV
Trigger: CACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAG...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCACTGCCCGCTCATGGCTaGCTTCAGCAGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSLPAHG*LQQSLV
Trigger: CACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAG...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCTGCCCGCTCATGGCTaGCTTCAGCAGAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCLPAHG*LQQSLV
Trigger: CACCAGGCTCTGCTGAAGGCAGCCATGAGCGGGCAG...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTTGGCGGTCAACTCCCTaGCCGCTCATGGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPWRSTP*PLMAAF
Trigger: GAAGGCAGCCATGAGCGGGCAGGGAGTTGACCGCCA...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGTCAGGAAGGGCGACTaGAGGTGGAGGAATCGGGAC +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGVRKGD*RWRNRD
Trigger: GTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGAC...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGTGGACAGCTGCCACTaGTCCGAATGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPVDSCH*SEWTWV
Trigger: GACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCAC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCTGGCTGGTGGACAGCTaGCACTGCTCCGAATGGACC +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSWLVDS*HCSEWT
Trigger: GGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTGGCTGGTGGACAGCTaGCACTGCTCCGAATGGACC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPWLVDS*HCSEWT
Trigger: GGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGCGTCCTCAATGTGCTaGCCCAGCCTGTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPASSMC*PSLWES
Trigger: GGATTCCCACAGGCTGGGGCAGCACATTGAGGACGC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGCCACATCCAGCAGTaGGTCCTCAATGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQGHIQQ*VLNVLP
Trigger: GGGCAGCACATTGAGGACGCACTGCTGGATGTGGCC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGGCCACATCCAGCAGTaGGTCCTCAATGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPGHIQQ*VLNVLP
Trigger: GGGCAGCACATTGAGGACGCACTGCTGGATGTGGCC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCRKPTA*CASAMS
Trigger: TGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCG...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFRKPTA*CASAMS
Trigger: TGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCG...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594038.5
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AGATCTTCTCGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: RSSRTGQSIRGAFPSAKSRKPTA*CASAMS
Trigger: TGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCG...CGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRYRRRA*TAFPAR
Trigger: TCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTA...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTAAGATCTTCTCGTACTaGGCAGAGCATAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAKIFSY*AEHKGR
Trigger: GCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTT...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGTCTTTTTGGACCCCTaGAATCCGCGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HQQSRGYLLAVQAVAVQEVFLDP*NPRGVE
Trigger: TTCAACACCACGCGGATTCCAGGGGTCCAAAAAGAC...CTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp GTCACTGACATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGAAGACAGCCACGTGTTaGCTGTCATGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VTDIIGRPPGLEPQVPLQKTATC*LSWRWR
Trigger: CCGCCACCTCCATGACAGCCAACACGTGGCTGTCTT...CTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTATGTCAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGAGGCTGTTTCGGGAGTaGGTCCCCATGCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQRLFRE*VPMRKN
Trigger: ATTCTTCCGCATGGGGACCCACTCCCGAAACAGCCT...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCAAACCAGCGATCATaGCCCCGGCCGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLSNQRS*PRPASR
Trigger: TCTGCTGGCCGGCCGGGGCCATGATCGCTGGTTTGA...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTTCAAACCAGCGATCATaGCCCCGGCCGGCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCSNQRS*PRPASR
Trigger: TCTGCTGGCCGGCCGGGGCCATGATCGCTGGTTTGA...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGATGGAGGAGTGGATCTaGTCTGGAAGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWMEEWI*SGRSHC
Trigger: GCAATGGGACCTTCCAGACCAGATCCACTCCTCCAT...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTAGAGAGATGGAGGAGTaGATCTGGTCTGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAREMEE*IWSGRS
Trigger: GGACCTTCCAGACCAGATCCACTCCTCCATCTCTCT...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGAGAGAGATGGAGGAGTaGATCTGGTCTGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVREMEE*IWSGRS
Trigger: GGACCTTCCAGACCAGATCCACTCCTCCATCTCTCT...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGAGGGTCGACGGGCCTTTaGAGTCCTGCCCACCCCGAG +
Preference number: 4 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGGSTGL*SPAHPE
Trigger: CTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCC...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CCA 90 bp TGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGCATTGGTGGGGGAGGACATaGCTCCGTGGGGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: WTPGIRVVLKIFSYWAEHWWGRT*LRGAQE
Trigger: TTCTTGAGCCCCACGGAGCCATGTCCTCCCCCACCA...ATGCTCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTCCCCTGTCCCGGAAGTaGGCCAGTTGCAAGGCGATC +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPPLSRK*ASCKAI
Trigger: GATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGG...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCCCCTGTCCCGGAAGTaGGCCAGTTGCAAGGCGATC +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCPLSRK*ASCKAI
Trigger: GATCGCCTTGCAACTGGCCCACTTCCGGGACAGGGG...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCTCCCTGCCCGCTCATaGCTGCCTTCAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSLPARS*LPSAEP
Trigger: AGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTCCCTGCCCGCTCATaGCTGCCTTCAGCAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCLPARS*LPSAEP
Trigger: AGGCTCTGCTGAAGGCAGCCATGAGCGGGCAGGGAG...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCTACAGCGCAAACAGGTaGCGGTCAACTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSYSANR*RSTPCP
Trigger: CGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTA...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGTGCTCCGAATGGACCTaGGTCAGGAAGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRCSEWT*VRKGDC
Trigger: GCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCA...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGCAGGGATCTGGCTGGTaGACAGCTGCCACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLQGSGW*TAATAP
Trigger: CGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTG...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGATCTGGCTGGTaGACAGCTGCCACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCQGSGW*TAATAP
Trigger: CGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTG...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCATGTCATTGAGGCCTTaGAGGCCCCAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPMSLRP*RPQSGG
Trigger: CCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACAT...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCGGAGTCAGAAGTCGGTaGATGTCATTGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASGVRSR*MSLRPW
Trigger: CCAAGGCCTCAATGACATCCACCGACTTCTGACTCC...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASFTLIP*RGQLPA
Trigger: AGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAA...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTTTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAFTLIP*RGQLPA
Trigger: AGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAA...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGAATCCGCGTGGTGTTaGAGATCTTCTCGTACTGGG +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQESAWC*RSSRTG
Trigger: CCCAGTACGAGAAGATCTTCAACACCACGCGGATTC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGCTCAGCATCCAGTaGCACAAAGAAAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSGLSIQ*HKESGP
Trigger: GGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCC...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGGCTCAGCATCCAGTaGCACAAAGAAAGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPGLSIQ*HKESGP
Trigger: GGGGCCGCTTTCTTTGTGTCACTGGATGCTGAGCCC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAAGCAGTGGCCGTCTGTTaGGTAGCCCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: PRVGCHGGGGCSLFGPLEAVAVC*VAQLKA
Trigger: TGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGC...TTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGGTGGCAGCGTCGGATaGAGCTCTTGCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGGGSVG*SSCQIG
Trigger: CCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACC...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGGTGGCAGCGTCGGATaGAGCTCTTGCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRGGSVG*SSCQIG
Trigger: CCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGGTGGCAGCGTCGGATaGAGCTCTTGCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPGGSVG*SSCQIG
Trigger: CCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPESRVR*SDPGVQ
Trigger: TTGGACCCCAGGATCCGATCAGCGGACCCTTGATTC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSESRVR*SDPGVQ
Trigger: TTGGACCCCAGGATCCGATCAGCGGACCCTTGATTC...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTTGTCCTCCATGGCCCTaGCAAAGTTGCAGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPCPPWP*QSCRPP
Trigger: GGGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACA...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCAACAGATGCATTTGCTaGACAGGGATCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASNRCIC*TGIWLV
Trigger: CACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTT...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCCCGAATCCACCGCCTaGGGAAACATAGTCCGGGTA +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSPESTA*GNIVRV
Trigger: TACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGG...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGGAGTTCTCCTTCCCTaGCCCTCTGAACCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLGVLLP*PSEPAL
Trigger: AAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGAGTTCTCCTTCCCTaGCCCTCTGAACCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPGVLLP*PSEPAL
Trigger: AAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTGGAGTTCTCCTTCCCTaGCCCTCTGAACCGGCGCTT +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCGVLLP*PSEPAL
Trigger: AAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCC...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGTCGGTGGATGTCATTaGGGCCTTGGAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSVGGCH*GLGGPS
Trigger: ACTGGGGCCTCCAAGGCCTCAATGACATCCACCGAC...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGCATGTTGCGGGGTCACGTTaGATCAAGGGTCCGCTGATC +
Preference number: 4 (lower is better)
Translates to: WTPGIRVVLKIFSYWAEHVAGSR*IKGPLI
Trigger: GATCAGCGGACCCTTGATTCAACGTGACCCCGCAAC...ATGCTCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTAGCCTCAGGAATTCCTaGGCCAGGACCGCGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VADVVFLDPWNPRGVEDLSLRNS*ARTAVQ
Trigger: CTGGACCGCGGTCCTGGCGCAGGAATTCCTGAGGCT...AAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCCSSDA*SLRNSC
Trigger: GCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTTGCAGCAGCGACGCCTaGAGCCTCAGGAATTCCTGC +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCCSSDA*SLRNSC
Trigger: GCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCA...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGAGCAGCTGTCAGAGCTaGCAGATGTTCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQSSCQS*QMFLVG
Trigger: CCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCT...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTCCCAAATCTCCCGCTTaGATATGTCCAATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAPKSPA*ICPIPV
Trigger: CACTGGGATTGGACATATGCAAGCGGGAGATTTGGG...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCCCCAAATCTCCCGCTTaGATATGTCCAATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASPKSPA*ICPIPV
Trigger: CACTGGGATTGGACATATGCAAGCGGGAGATTTGGG...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGCCCAAATCTCCCGCTTaGATATGTCCAATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVPKSPA*ICPIPV
Trigger: CACTGGGATTGGACATATGCAAGCGGGAGATTTGGG...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGAGCCTCAGGGCCACGTaGAGTGTGAAGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQSLRAT*SVKIRA
Trigger: AGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCT...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTGTTCACCATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAAGCCTCAGGGCCACGTaGAGTGTGAAGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AVHHQRISGAQVHKFLPPSLRAT*SVKIRA
Trigger: AGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCT...TGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATGGTGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTTCAGCAGAGCCTGGTaGTTGTCCACTGCCACGCGG +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCFSRAW*LSTATR
Trigger: CCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGAAGGGCGACTaGAGGTGGAGGAATCGGGAC +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCVRKGD*RWRNRD
Trigger: GTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGAC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGTGGACAGCTGCCACTaGTCCGAATGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVVDSCH*SEWTWV
Trigger: GACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCAC...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTGGACAGCTGCCACTaGTCCGAATGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCVDSCH*SEWTWV
Trigger: GACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCAC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCGTCCTCAATGTGCTaGCCCAGCCTGTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPASSMC*PSLWES
Trigger: GGATTCCCACAGGCTGGGGCAGCACATTGAGGACGC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGCGTCCTCAATGTGCTaGCCCAGCCTGTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPASSMC*PSLWES
Trigger: GGATTCCCACAGGCTGGGGCAGCACATTGAGGACGC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGCGTCCTCAATGTGCTaGCCCAGCCTGTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVASSMC*PSLWES
Trigger: GGATTCCCACAGGCTGGGGCAGCACATTGAGGACGC...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCAGTGCGTCCTCAATGTaGTGCCCCAGCCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPSASSM*CPSLWE
Trigger: TTCCCACAGGCTGGGGCAGCACATTGAGGACGCACT...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGTGCGTCCTCAATGTaGTGCCCCAGCCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRSASSM*CPSLWE
Trigger: TTCCCACAGGCTGGGGCAGCACATTGAGGACGCACT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGCCACATCCAGCAGTaGGTCCTCAATGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPGHIQQ*VLNVLP
Trigger: GGGCAGCACATTGAGGACGCACTGCTGGATGTGGCC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGGCCACATCCAGCAGTaGGTCCTCAATGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCGHIQQ*VLNVLP
Trigger: GGGCAGCACATTGAGGACGCACTGCTGGATGTGGCC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTAGAAATCCACACCTGTaGCTGGAGTTCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPARNPHL*LEFSFP
Trigger: AGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCT...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGAGAAATCCACACCTGTaGCTGGAGTTCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVRNPHL*LEFSFP
Trigger: AGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCT...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGAGAGGCCAGCTGCCTaGTGGAAGGAGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPERPAA*WKESEV
Trigger: GACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTCTC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGTTGCCAAACCAGTTaGCCCTGTCCTGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQGCQTS*PCPVSA
Trigger: GGCTGACACAGGACAGGGGCAACTGGTTTGGCAACC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGGTTGCCAAACCAGTTaGCCCTGTCCTGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPGCQTS*PCPVSA
Trigger: GGCTGACACAGGACAGGGGCAACTGGTTTGGCAACC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGGTTGCCAAACCAGTTaGCCCTGTCCTGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPGCQTS*PCPVSA
Trigger: GGCTGACACAGGACAGGGGCAACTGGTTTGGCAACC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGCCTGGATGTGGGGTTaGCAAACCAGTTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRAWMWG*QTSCPC
Trigger: ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGCCTGGATGTGGGGTTaGCAAACCAGTTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPAWMWG*QTSCPC
Trigger: ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGCCAGCTGCCTGCTGTaGCTGGAGTTCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVASCLL*LEFSFP
Trigger: AGGGAAGGAGAACTCCAGGCACAGCAGGCAGCTGGC...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597099.1
CDS-3UTR GCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGAGAGGCCAGCTGCCTaGTGTGCCTGGAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLERPAA*CAWSSP
Trigger: AGGAGAACTCCAGGCACAGCAGGCAGCTGGCCTCTC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597099.1
CDS-3UTR GCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCTTGGAGAGGCCAGCTaGCTGCTGTGCCTGGAGTTC +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLLGEAS*LLCLEF
Trigger: GAACTCCAGGCACAGCAGGCAGCTGGCCTCTCCAAG...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597099.1
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGAGGAACCAGGCAAGCTaGATGGCACTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWRNQAS*MALKRK
Trigger: TTTCCTCTTCAGTGCCATCCAGCTTGCCTGGTTCCT...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTCTGAACAGCATCGGGTaGCGGCCAGAGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPLNSIG*RPEKMR
Trigger: CCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAG...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGCTGAACAGCATCGGGTaGCGGCCAGAGAAGATGCGG +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVLNSIG*RPEKMR
Trigger: CCGCATCTTCTCTGGCCGCCACCCGATGCTGTTCAG...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCYRRRA*TAFPAR
Trigger: TCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTTACAGGAGGAGGGCATaGACGGCATTCCCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCYRRRA*TAFPAR
Trigger: TCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTA...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTCTTTTTGGACCCCTaGAATCCGCGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCVFLDP*NPRGVE
Trigger: TTCAACACCACGCGGATTCCAGGGGTCCAAAAAGAC...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAAAGACAGCCACGTGTTaGCTGTCATGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGKTATC*LSWRWR
Trigger: CCGCCACCTCCATGACAGCCAACACGTGGCTGTCTT...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCAAGACAGCCACGTGTTaGCTGTCATGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSKTATC*LSWRWR
Trigger: CCGCCACCTCCATGACAGCCAACACGTGGCTGTCTT...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCAAGAATCGGCCCCGGTaGAAGACAGCCACGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPKNRPR*KTATCW
Trigger: CCAACACGTGGCTGTCTTCCACCGGGGCCGATTCTT...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAAAGAATCGGCCCCGGTaGAAGACAGCCACGTGTTGG +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGKNRPR*KTATCW
Trigger: CCAACACGTGGCTGTCTTCCACCGGGGCCGATTCTT...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGACATGTGTCCTGAGATaGGGCAGTCGGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRTCVLR*GSRPRS
Trigger: ACTCCTGGGCCGACTGCCCCATCTCAGGACACATGT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCCGCTGATCGGATCCTaGGGTCCAAACCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLPLIGS*GPNPSP
Trigger: TGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGG...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTCCGCTGATCGGATCCTaGGGTCCAAACCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCPLIGS*GPNPSP
Trigger: TGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGG...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCATGGTGGGGGAGGACATaGCTCCGTGGGGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSWWGRT*LRGAQE
Trigger: TTCTTGAGCCCCACGGAGCCATGTCCTCCCCCACCA...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCCAGGGCGAGGCACTGTaGGTCCGTCTTCTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPQGEAL*VRLLFV
Trigger: GACAAAGAGAAGACGGACCCACAGTGCCTCGCCCTG...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGACAGGGCGAGGCACTGTaGGTCCGTCTTCTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGQGEAL*VRLLFV
Trigger: GACAAAGAGAAGACGGACCCACAGTGCCTCGCCCTG...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTTACAGCGCAAACAGGTaGCGGTCAACTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPYSANR*RSTPCP
Trigger: CGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTA...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTACAGCGCAAACAGGTaGCGGTCAACTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLYSANR*RSTPCP
Trigger: CGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTA...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAAAGGGCGACTGCAGGTaGAGGAATCGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGKGDCR*RNRDTM
Trigger: CATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTT...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCAAGGGCGACTGCAGGTaGAGGAATCGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSKGDCR*RNRDTM
Trigger: CATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTT...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGAAGGGCGACTGCAGGTaGAGGAATCGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQKGDCR*RNRDTM
Trigger: CATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTT...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCTCCGAATGGACCTaGGTCAGGAAGGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSCSEWT*VRKGDC
Trigger: GCAGTCGCCCTTCCTGACCCAGGTCCATTCGGAGCA...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAAATGCTGTCCCGCCTaGAACAGGGAGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRKCCPA*NREATS
Trigger: GGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCAAATGCTGTCCCGCCTaGAACAGGGAGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPKCCPA*NREATS
Trigger: GGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTT...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTATGTCATTGAGGCCTTaGAGGCCCCAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPMSLRP*RPQSGG
Trigger: CCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACAT...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTATGTCATTGAGGCCTTaGAGGCCCCAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCMSLRP*RPQSGG
Trigger: CCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACAT...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCATGTCATTGAGGCCTTaGAGGCCCCAGTCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVMSLRP*RPQSGG
Trigger: CCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACAT...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGACATCTTTATTGGCCTaGATGTGGGGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLTSLLA*MWGCQT
Trigger: GGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCTCACACATCTTTATTaGCCTGGATGTGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWLTHLY*PGCGVA
Trigger: GGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTCAGCCATGTCACGCTaGAGCCGCTTTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPSAMSR*SRFQLP
Trigger: AGGCAGCTGAAAGCGGCTCCAGCGTGACATGGCTGA...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392518.8
CDS-3UTR CCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCCGGAACCCGGGTTCCTaGGCTCCTCACTCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFRNPGS*APHSAH
Trigger: ATGAGCTGAGTGAGGAGCCCAGGAACCCGGGTTCCG...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594038.5
3UTR CAA 72 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTaGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVG*PNQLPLSCVSQ
Trigger: CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCCAGGAAACACACCGGTaGGAAAGTCATTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASQETHR*ESHSRN
Trigger: GTTTCTGGAATGACTTTCTCACCGGTGTGTTTCCTG...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CCAGTCACTGACATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGGAATCCGCGTGGTGTTaGAGATCTTCTCGTACTGGG +
Preference number: 4 (lower is better)
Translates to: PVTDIIGRPPGLEPQVPLESAWC*RSSRTG
Trigger: CCCAGTACGAGAAGATCTTCAACACCACGCGGATTC...CAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTATGTCAGTGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR TCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGCAGTGGCCGTCTGTTaGGTAGCCCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLAVAVC*VAQLKA
Trigger: TGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGCAGTGGCCGTCTGTTaGGTAGCCCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLAVAVC*VAQLKA
Trigger: TGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGC...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCAGTGGCCGTCTGTTaGGTAGCCCAGCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSAVAVC*VAQLKA
Trigger: TGCTTTCAGCTGGGCTACTCAACAGACGGCCACTGC...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCGGTGGCAGCGTCGGATaGAGCTCTTGCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVGGSVG*SSCQIG
Trigger: CCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACC...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGGTGGCAGCGTCGGATaGAGCTCTTGCCAAATAGGG +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLGGSVG*SSCQIG
Trigger: CCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACC...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCTGGATGAAGCTGTCTaGAGAGAGGTGGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLLDEAV*REVAAS
Trigger: CGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAG...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCTGGATGAAGCTGTCTaGAGAGAGGTGGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSLDEAV*REVAAS
Trigger: CGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTCCCGAATCCACCGCCTaGGGAAACATAGTCCGGGTA +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPPESTA*GNIVRV
Trigger: TACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGG...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGCCCGAATCCACCGCCTaGGGAAACATAGTCCGGGTA +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLPESTA*GNIVRV
Trigger: TACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGG...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCTTCGGGACCTCACGTTaGATCAAGGGTCCGCTGATC +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSFGTSR*IKGPLI
Trigger: GATCAGCGGACCCTTGATTCAACGTGAGGTCCCGAA...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGCACCTGAAGGGTCTTaGGGGTCCTGGTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRAPEGS*GSWFVD
Trigger: GTCTACAAACCAGGACCCTCAAGACCCTTCAGGTGC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392518.8
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGCCCTGAAGGGTCTTaGGGGTCCTGGTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRSPEGS*GSWFVD
Trigger: GTCTACAAACCAGGACCCTCAAGACCCTTCAGGGCT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTAGCAGCTGTCAGAGCTaGCAGATGTTCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPSSCQS*QMFLVG
Trigger: CCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCT...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTAGCAGCTGTCAGAGCTaGCAGATGTTCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCSSCQS*QMFLVG
Trigger: CCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCT...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp GAAGACAGCCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACAGCAGCTGTCAGAGCTaGCAGATGTTCCTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EDSHVLAVMEVADVVFLDSSCQS*QMFLVG
Trigger: CCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCT...GTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGGCTGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp AATTGTGGACGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTGGTGGACAGGCATCCAACGACGCTaGCGGGTCCTCCCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: NCGRQTDAFAEQGSGWWTGIQRR*RVLPGE
Trigger: CTCACCAGGGAGGACCCGGCAGCGTCGTTGGATGCC...TGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCGGAAGTGGGCCAGTTaGAAGGCGATCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQRKWAS*KAIWMK
Trigger: CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCG...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGACGGAAGTGGGCCAGTTaGAAGGCGATCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGRKWAS*KAIWMK
Trigger: CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCG...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCCGGAAGTGGGCCAGTTaGAAGGCGATCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPRKWAS*KAIWMK
Trigger: CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCG...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCGGAAGTGGGCCAGTTaGAAGGCGATCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: VLAVMEVADVVFLDPWNPRKWAS*KAIWMK
Trigger: CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCG...CGGATTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGCGGAAGTGGGCCAGTTaGAAGGCGATCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRRKWAS*KAIWMK
Trigger: CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCG...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGAGGGCCTTTGGAGTCCTaGCCACCCCGAGATCACCGT +
Preference number: 4 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGGPLES*PPRDHR
Trigger: ACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCC...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR GCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAAGCCTCAGGGCCACGTaGAGTGTGAAGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSSLRAT*SVKIRA
Trigger: AGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAGCCTCAGGGCCACGTaGAGTGTGAAGATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPSLRAT*SVKIRA
Trigger: AGCCCTGATCTTCACACTGCACGTGGCCCTGAGGCT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGTGGACAGCTGCCACTaGTCCGAATGGACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FLDPWNPRGVEDLLVLGRVDSCH*SEWTWV
Trigger: GACCCAGGTCCATTCGGAGCAGTGGCAGCTGTCCAC...TCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTAGTGCGTCCTCAATGTaGTGCCCCAGCCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCSASSM*CPSLWE
Trigger: TTCCCACAGGCTGGGGCAGCACATTGAGGACGCACT...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGAGTGCGTCCTCAATGTaGTGCCCCAGCCTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLSASSM*CPSLWE
Trigger: TTCCCACAGGCTGGGGCAGCACATTGAGGACGCACT...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAACCGGCGCTTAAAATaGTGTCCCGCCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRNRRLK*CPAWNR
Trigger: CCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCAACCGGCGCTTAAAATaGTGTCCCGCCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSNRRLK*CPAWNR
Trigger: CCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTT...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGAGAGGCCAGCTGCCTaGTGGAAGGAGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPERPAA*WKESEV
Trigger: GACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTCTC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGAGAGGCCAGCTGCCTaGTGGAAGGAGTCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCERPAA*WKESEV
Trigger: GACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTCTC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCACTTGGAGAGGCCAGCTaGCTGCTGGAAGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSLGEAS*LLEGVR
Trigger: TCTGACTCCTTCCAGCAGGCAGCTGGCCTCTCCAAG...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCTTGGAGAGGCCAGCTaGCTGCTGGAAGGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLLGEAS*LLEGVR
Trigger: TCTGACTCCTTCCAGCAGGCAGCTGGCCTCTCCAAG...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCGGTTGCCAAACCAGTTaGCCCTGTCCTGTGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSGCQTS*PCPVSA
Trigger: GGCTGACACAGGACAGGGGCAACTGGTTTGGCAACC...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGCCTGGATGTGGGGTTaGCAAACCAGTTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCAWMWG*QTSCPC
Trigger: ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGGCCTGGATGTGGGGTTaGCAAACCAGTTGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVAWMWG*QTSCPC
Trigger: ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGACGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGRKPTA*CASAMS
Trigger: TGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCG...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594038.5
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGTCTTTTTGGACCCCTaGAATCCGCGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQVFLDP*NPRGVE
Trigger: TTCAACACCACGCGGATTCCAGGGGTCCAAAAAGAC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCAAGACAGCCACGTGTTaGCTGTCATGGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSKTATC*LSWRWR
Trigger: CCGCCACCTCCATGACAGCCAACACGTGGCTGTCTT...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCAAGAATCGGCCCCGGTaGAAGACAGCCACGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFKNRPR*KTATCW
Trigger: CCAACACGTGGCTGTCTTCCACCGGGGCCGATTCTT...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTAAGAATCGGCCCCGGTaGAAGACAGCCACGTGTTGG +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCKNRPR*KTATCW
Trigger: CCAACACGTGGCTGTCTTCCACCGGGGCCGATTCTT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGGCTGTTTCGGGAGTaGGTCCCCATGCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRRLFRE*VPMRKN
Trigger: ATTCTTCCGCATGGGGACCCACTCCCGAAACAGCCT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTACATGTGTCCTGAGATaGGGCAGTCGGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCTCVLR*GSRPRS
Trigger: ACTCCTGGGCCGACTGCCCCATCTCAGGACACATGT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGGAGTGGATCTGGTCTaGAAGGTCCCATTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLGVDLV*KVPLQP
Trigger: CGGCTGCAATGGGACCTTCCAGACCAGATCCACTCC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGGAGTGGATCTGGTCTaGAAGGTCCCATTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCGVDLV*KVPLQP
Trigger: CGGCTGCAATGGGACCTTCCAGACCAGATCCACTCC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGACTGTCTGAAGAGAGGTaGCAGCGTCGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGLSEER*QRRMKL
Trigger: GAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTAGTTGCAAGGCGATCTaGATGAAGCTGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPASCKAI*MKLSEE
Trigger: CTCTTCAGACAGCTTCATCCAGATCGCCTTGCAACT...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGAATAAGCGAGTCATaGCCGACTCATAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGISES*PTHKSG
Trigger: GCCTGACTTATGAGTCGGCCATGACTCGCTTATTCC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGATACAGCGCAAACAGGTaGCGGTCAACTCCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: FLDPWNPRGVEDLLVLGRYSANR*RSTPCP
Trigger: CGGGCAGGGAGTTGACCGCCACCTGTTTGCGCTGTA...TCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAAGGGCGACTGCAGGTaGAGGAATCGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPKGDCR*RNRDTM
Trigger: CATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGAAATGCTGTCCCGCCTaGAACAGGGAGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVKCCPA*NREATS
Trigger: GGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTT...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAAATGCTGTCCCGCCTaGAACAGGGAGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVKCCPA*NREATS
Trigger: GGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTT...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTAAATGCTGTCCCGCCTaGAACAGGGAGGCCACATCC +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPKCCPA*NREATS
Trigger: GGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTT...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGATCCACACCTGTGCCTaGAGTTCTCCTTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRIHTCA*SSPSLT
Trigger: GGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGAT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCATCCACACCTGTGCCTaGAGTTCTCCTTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPIHTCA*SSPSLT
Trigger: GGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGAT...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTAGGCCAGCTGCCTGCTaGAAGGAGTCAGAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCRPAAC*KESEVG
Trigger: ACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAGGCCAGCTGCCTGCTaGAAGGAGTCAGAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPRPAAC*KESEVG
Trigger: ACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGAGGCCAGCTGCCTGCTaGAAGGAGTCAGAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLRPAAC*KESEVG
Trigger: ACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCT...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTAGGCCAGCTGCCTGCTaGAAGGAGTCAGAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCRPAAC*KESEVG
Trigger: ACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCT...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCC +
Preference number: 4 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASCVSQL*QFHPYS
Trigger: GGAATAAGGGTGAAATTGCCACAGCTGGCTGACACA...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGTTATTGGCCTGGATGTaGGGTTGCCAAACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQLLAWM*GCQTSC
Trigger: GCAACTGGTTTGGCAACCCCACATCCAGGCCAATAA...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGACATCTTTATTGGCCTaGATGTGGGGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVTSLLA*MWGCQT
Trigger: GGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCAGGAAACACACCGGTaGGAAAGTCATTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQQETHR*ESHSRN
Trigger: GTTTCTGGAATGACTTTCTCACCGGTGTGTTTCCTG...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGCAGAGGCGTGGGTGTaGCATACAGGAAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCAEAWV*HTGSPS
Trigger: TGATGGACTTCCTGTATGTCACACCCACGCCTCTGC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000598293.6
CDS-3UTR TCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGCAGAGGCGTGGGTGTaGCATACAGGAAGTCCATCA +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCAEAWV*HTGSPS
Trigger: TGATGGACTTCCTGTATGTCACACCCACGCCTCTGC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000598293.6
CDS-3UTR TCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTCATCCAGGATTCTCTaGAACTGCTGCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPSSRIL*NCCSRA
Trigger: AGCCCTGGAGCAGCAGTTTCAGAGAATCCTGGATGA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ACATTTTCAGACAAGATCTTGGCTCCCCTCAGGGCTAGAGAGATGGAGGAGTGGCTGGATGAAGCTGTCTaGAGAGAGGTGGCAGCGTCG +
Preference number: 4 (lower is better)
Translates to: TFSDKILAPLRAREMEEWLDEAV*REVAAS
Trigger: CGACGCTGCCACCTCTCTTCAGACAGCTTCATCCAG...CCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGCAAGGCGATCTGGATaGAGCTGTCTGAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPARRSG*SCLKRG
Trigger: ACCTCTCTTCAGACAGCTTCATCCAGATCGCCTTGC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCAGCCCTGAAGGGTCTTaGGGGTCCTGGTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFSPEGS*GSWFVD
Trigger: GTCTACAAACCAGGACCCTCAAGACCCTTCAGGGCT...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594038.5
CDS-3UTR TCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCAGCCCTGAAGGGTCTTaGGGGTCCTGGTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVSPEGS*GSWFVD
Trigger: GTCTACAAACCAGGACCCTCAAGACCCTTCAGGGCT...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp AATTGTGGACGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTGGTGGACATCTGGAAGGTCCCATTaGAGCCGCTGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NCGRQTDAFAEQGSGWWTSGRSH*SRWGWG
Trigger: ACCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGA...TGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCGGAAGTGGGCCAGTTaGAAGGCGATCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSRKWAS*KAIWMK
Trigger: CTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTTATGTCCAATCCCAGTaGAAGGAGTCCACCACCGGG +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCYVQSQ*KESTTG
Trigger: CCCGGTGGTGGACTCCTTGCACTGGGATTGGACATA...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTATGTCCAATCCCAGTaGAAGGAGTCCACCACCGGG +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVYVQSQ*KESTTG
Trigger: CCCGGTGGTGGACTCCTTGCACTGGGATTGGACATA...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTAACCGGCGCTTAAAATaGTGTCCCGCCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCNRRLK*CPAWNR
Trigger: CCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTT...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGAACCGGCGCTTAAAATaGTGTCCCGCCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLNRRLK*CPAWNR
Trigger: CCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTT...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCAACCGGCGCTTAAAATaGTGTCCCGCCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSNRRLK*CPAWNR
Trigger: CCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTT...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTAACCGGCGCTTAAAATaGTGTCCCGCCTGGAACAGG +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCNRRLK*CPAWNR
Trigger: CCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR GCA 90 bp GCTGTTCACCATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCATGGTCCAGGCTGAGTTaGGGGGTCACGTTGAATCAA +
Preference number: 4 (lower is better)
Translates to: AVHHQRISGAQVHKFLPPWSRLS*GVTLNQ
Trigger: TTGATTCAACGTGACCCCGCAACTCAGCCTGGACCA...TGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATGGTGAACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAAGGAAGGATCCAGCTaGAGGAACCAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPKEGSS*RNQASW
Trigger: CCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTAAGGAAGGATCCAGCTaGAGGAACCAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCKEGSS*RNQASW
Trigger: CCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTAGGCTGTTTCGGGAGTaGGTCCCCATGCGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCRLFRE*VPMRKN
Trigger: ATTCTTCCGCATGGGGACCCACTCCCGAAACAGCCT...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCTCAGGGCTAGAGAGATaGAGGAGTGGATCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSSGLER*RSGSGL
Trigger: CAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGA...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGTCAGGGCTAGAGAGATaGAGGAGTGGATCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRSGLER*RSGSGL
Trigger: CAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGA...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGTTCACCATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAGTCAGGGCTAGAGAGATaGAGGAGTGGATCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LFTISGFRERRYTNSSHQSGLER*RSGSGL
Trigger: CAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGA...CTGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATGGTGAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTGTCTGAAGAGAGGTaGCAGCGTCGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCLSEER*QRRMKL
Trigger: GAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCTGTCTGAAGAGAGGTaGCAGCGTCGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLLSEER*QRRMKL
Trigger: GAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGATCTTCTCGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGCTGTCTGAAGAGAGGTaGCAGCGTCGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RSSRTGQSIRGAFPSAKSLSEER*QRRMKL
Trigger: GAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG...CGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGCTGTCTGAAGAGAGGTaGCAGCGTCGGATGAAGCTC +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVLSEER*QRRMKL
Trigger: GAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGACCGCTGATCGGATCCTaGGGTCCAAACCCGAGTCCA +
Preference number: 4 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGPLIGS*GPNPSP
Trigger: TGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGG...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CCA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGTTTTTGCTGGAGATGTaGAAGGTGATCATGCCATCC +
Preference number: 4 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVFLLEM*KVIMPS
Trigger: GGATGGCATGATCACCTTCCACATCTCCAGCAAAAA...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTATCCACACCTGTGCCTaGAGTTCTCCTTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCIHTCA*SSPSLT
Trigger: GGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGAT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGATCCACACCTGTGCCTaGAGTTCTCCTTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLIHTCA*SSPSLT
Trigger: GGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGAT...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGATCCACACCTGTGCCTaGAGTTCTCCTTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVIHTCA*SSPSLT
Trigger: GGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGAT...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGGAGTCAGAAGTCGGTaGATGTCATTGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRGVRSR*MSLRPW
Trigger: CCAAGGCCTCAATGACATCCACCGACTTCTGACTCC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGAGTCAGAAGTCGGTaGATGTCATTGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQGVRSR*MSLRPW
Trigger: CCAAGGCCTCAATGACATCCACCGACTTCTGACTCC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPFTLIP*RGQLPA
Trigger: AGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAA...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPFTLIP*RGQLPA
Trigger: AGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCC +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQCVSQL*QFHPYS
Trigger: GGAATAAGGGTGAAATTGCCACAGCTGGCTGACACA...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGACATCTTTATTGGCCTaGATGTGGGGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQTSLLA*MWGCQT
Trigger: GGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
3UTR CAA 72 bp CCGTGGTGTTGTCCACCCCAGTCAGGCAGCAACTCTTaGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: PWCCPPQSGSNS*IFSISPKEGSS
Trigger: GCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGACTGGGGTGGACAACACCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
3UTR CAA 72 bp CTGTCTGAAGAGAGGTGGCAGCGTCGGATGAAGCTCTaGCCAAATAGGGAGAATGGAACGACATGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: LSEERWQRRMKL*PNRENGTTWQS
Trigger: CGACTGCCATGTCGTTCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACGCTGCCACCTCTCTTCAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp GTCACTGACATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: VTDIIGRPPGLEPQVPLQQAATL*SSPSVL
Trigger: TAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTG...CTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTATGTCAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR TCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGAATCCGCGTGGTGTTaGAGATCTTCTCGTACTGGG +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCESAWC*RSSRTG
Trigger: CCCAGTACGAGAAGATCTTCAACACCACGCGGATTC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTCATCCAGGATTCTCTaGAACTGCTGCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVSSRIL*NCCSRA
Trigger: AGCCCTGGAGCAGCAGTTTCAGAGAATCCTGGATGA...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCTCATCCAGGATTCTCTaGAACTGCTGCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVSSRIL*NCCSRA
Trigger: AGCCCTGGAGCAGCAGTTTCAGAGAATCCTGGATGA...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGCAAGGCGATCTGGATaGAGCTGTCTGAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLARRSG*SCLKRG
Trigger: ACCTCTCTTCAGACAGCTTCATCCAGATCGCCTTGC...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGCAAGGCGATCTGGATaGAGCTGTCTGAAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLARRSG*SCLKRG
Trigger: ACCTCTCTTCAGACAGCTTCATCCAGATCGCCTTGC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGAGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGESRVR*SDPGVQ
Trigger: TTGGACCCCAGGATCCGATCAGCGGACCCTTGATTC...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR TCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGCGCTGGAGCCCACGTTaGATCAAGGGTCCGCTGATC +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQRWSPR*IKGPLI
Trigger: GATCAGCGGACCCTTGATTCAACGTGGGCTCCAGCG...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596922.5
CDS-3UTR CCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGAGGAACCAGGCAAGCTaGATGGCACTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQRNQAS*MALKRK
Trigger: TTTCCTCTTCAGTGCCATCCAGCTTGCCTGGTTCCT...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAAGATCTTCTCGTACTaGGCAGAGCATAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPKIFSY*AEHKGR
Trigger: GCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAAAGATCTTCTCGTACTaGGCAGAGCATAAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSKIFSY*AEHKGR
Trigger: GCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCTT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTATGGAGGAGTGGATCTaGTCTGGAAGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPMEEWI*SGRSHC
Trigger: GCAATGGGACCTTCCAGACCAGATCCACTCCTCCAT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCATGGAGGAGTGGATCTaGTCTGGAAGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVMEEWI*SGRSHC
Trigger: GCAATGGGACCTTCCAGACCAGATCCACTCCTCCAT...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGATGGAGGAGTGGATCTaGTCTGGAAGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLMEEWI*SGRSHC
Trigger: GCAATGGGACCTTCCAGACCAGATCCACTCCTCCAT...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAATGGAGGAGTGGATCTaGTCTGGAAGGTCCCATTGC +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSMEEWI*SGRSHC
Trigger: GCAATGGGACCTTCCAGACCAGATCCACTCCTCCAT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGAGAGAGATGGAGGAGTaGATCTGGTCTGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLREMEE*IWSGRS
Trigger: GGACCTTCCAGACCAGATCCACTCCTCCATCTCTCT...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTAGAGAGATGGAGGAGTaGATCTGGTCTGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCREMEE*IWSGRS
Trigger: GGACCTTCCAGACCAGATCCACTCCTCCATCTCTCT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAAGAGAGATGGAGGAGTaGATCTGGTCTGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSREMEE*IWSGRS
Trigger: GGACCTTCCAGACCAGATCCACTCCTCCATCTCTCT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCAGGGCTAGAGAGATaGAGGAGTGGATCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLSGLER*RSGSGL
Trigger: CAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGA...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTCAGGGCTAGAGAGATaGAGGAGTGGATCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSSGLER*RSGSGL
Trigger: CAGACCAGATCCACTCCTCCATCTCTCTAGCCCTGA...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGAGAATGGAACGACATaGCAGTCGACATTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQENGTT*QSTFSD
Trigger: GTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCGGAATAAGCGAGTCATaGCCGACTCATAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSGISES*PTHKSG
Trigger: GCCTGACTTATGAGTCGGCCATGACTCGCTTATTCC...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTGTTCACCATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAGGGAATAAGCGAGTCATaGCCGACTCATAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LFTISGFRERRYTNSSHQGISES*PTHKSG
Trigger: GCCTGACTTATGAGTCGGCCATGACTCGCTTATTCC...CTGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATGGTGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGAATAAGCGAGTCATaGCCGACTCATAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQGISES*PTHKSG
Trigger: GCCTGACTTATGAGTCGGCCATGACTCGCTTATTCC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGCTGCCCCAGCCTGTaGGAATCCGTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLCCPSL*ESVFVL
Trigger: AAGCACAAAAACGGATTCCCACAGGCTGGGGCAGCA...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTGCTGCCCCAGCCTGTaGGAATCCGTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCCCPSL*ESVFVL
Trigger: AAGCACAAAAACGGATTCCCACAGGCTGGGGCAGCA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCATGCTGCCCCAGCCTGTaGGAATCCGTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSCCPSL*ESVFVL
Trigger: AAGCACAAAAACGGATTCCCACAGGCTGGGGCAGCA...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTTGCTGCCCCAGCCTGTaGGAATCCGTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPCCPSL*ESVFVL
Trigger: AAGCACAAAAACGGATTCCCACAGGCTGGGGCAGCA...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTGCTGCCCCAGCCTGTaGGAATCCGTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVCCPSL*ESVFVL
Trigger: AAGCACAAAAACGGATTCCCACAGGCTGGGGCAGCA...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTTGCTGCCCCAGCCTGTaGGAATCCGTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCCCPSL*ESVFVL
Trigger: AAGCACAAAAACGGATTCCCACAGGCTGGGGCAGCA...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCGGAGTCAGAAGTCGGTaGATGTCATTGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVGVRSR*MSLRPW
Trigger: CCAAGGCCTCAATGACATCCACCGACTTCTGACTCC...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGGAGTCAGAAGTCGGTaGATGTCATTGAGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLGVRSR*MSLRPW
Trigger: CCAAGGCCTCAATGACATCCACCGACTTCTGACTCC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTTTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCFTLIP*RGQLPA
Trigger: AGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAA...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTTTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCFTLIP*RGQLPA
Trigger: AGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAA...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTTATTGGCCTGGATGTaGGGTTGCCAAACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPLLAWM*GCQTSC
Trigger: GCAACTGGTTTGGCAACCCCACATCCAGGCCAATAA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGACTCACACATCTTTATTaGCCTGGATGTGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: AVAISPLFLGEASCLLEGLTHLY*PGCGVA
Trigger: GGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCTCACACATCTTTATTaGCCTGGATGTGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSLTHLY*PGCGVA
Trigger: GGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTCACACATCTTTATTaGCCTGGATGTGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPLTHLY*PGCGVA
Trigger: GGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGCAGGAAACACACCGGTaGGAAAGTCATTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRQETHR*ESHSRN
Trigger: GTTTCTGGAATGACTTTCTCACCGGTGTGTTTCCTG...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRQAATL*SSPSVL
Trigger: TAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTG...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ACATTTTCAGACAAGATCTTGGCTCCCCTCAGGGCTAGAGAGATGGAGGAGTGGTCATCCAGGATTCTCTaGAACTGCTGCTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TFSDKILAPLRAREMEEWSSRIL*NCCSRA
Trigger: AGCCCTGGAGCAGCAGTTTCAGAGAATCCTGGATGA...CCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTAACAGATGCATTTGCTaGACAGGGATCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCNRCIC*TGIWLV
Trigger: CACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTT...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCAACAGATGCATTTGCTaGACAGGGATCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVNRCIC*TGIWLV
Trigger: CACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTT...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCAAGACCCCAGAAACGTaGGAGATGCCTTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFKTPET*EMPFPG
Trigger: TCCTGGAAAAGGCATCTCTCACGTTTCTGGGGTCTT...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000594038.5
ENST00000596922.5
ENST00000598259.5
CDS-3UTR TCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCAGTTCAGGGATGAAGTaGGCTGTGATGGTGACACTG +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFSSGMK*AVMVTL
Trigger: CAGTGTCACCATCACAGCTCACTTCATCCCTGAACT...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000594038.5
ENST00000596922.5
ENST00000598259.5
CDS-3UTR GCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCCCAAATCTCCCGCTTaGATATGTCCAATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCPKSPA*ICPIPV
Trigger: CACTGGGATTGGACATATGCAAGCGGGAGATTTGGG...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAAGAAATCCACACCTGTaGCTGGAGTTCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSRNPHL*LEFSFP
Trigger: AGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAGAAATCCACACCTGTaGCTGGAGTTCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPRNPHL*LEFSFP
Trigger: AGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR GCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCAGAAATCCACACCTGTaGCTGGAGTTCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSRNPHL*LEFSFP
Trigger: AGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCT...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGCTCAAGATTCGGGGGTaGGTGGAGGAGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQLKIRG*VEEGNW
Trigger: CCAGTTTCCCTCCTCCACCCACCCCCGAATCTTGAG...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCAGGAACCAGGCAAGCTaGATGGCACTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSRNQAS*MALKRK
Trigger: TTTCCTCTTCAGTGCCATCCAGCTTGCCTGGTTCCT...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAAGGAACCAGGCAAGCTaGATGGCACTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSRNQAS*MALKRK
Trigger: TTTCCTCTTCAGTGCCATCCAGCTTGCCTGGTTCCT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGAAAGGAAGGATCCAGCTaGAGGAACCAGGCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGKEGSS*RNQASW
Trigger: CCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTT...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTTTTTGGACCCCTaGAATCCGCGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPVFLDP*NPRGVE
Trigger: TTCAACACCACGCGGATTCCAGGGGTCCAAAAAGAC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTGTCTTTTTGGACCCCTaGAATCCGCGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCVFLDP*NPRGVE
Trigger: TTCAACACCACGCGGATTCCAGGGGTCCAAAAAGAC...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTGGAATAAGCGAGTCATaGCCGACTCATAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCGISES*PTHKSG
Trigger: GCCTGACTTATGAGTCGGCCATGACTCGCTTATTCC...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGGAATAAGCGAGTCATaGCCGACTCATAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVGISES*PTHKSG
Trigger: GCCTGACTTATGAGTCGGCCATGACTCGCTTATTCC...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGAAGGGCGACTGCAGGTaGAGGAATCGGGACACGATG +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQKGDCR*RNRDTM
Trigger: CATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTT...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCC +
Preference number: 4 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSCVSQL*QFHPYS
Trigger: GGAATAAGGGTGAAATTGCCACAGCTGGCTGACACA...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTTATTGGCCTGGATGTaGGGTTGCCAAACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCLLAWM*GCQTSC
Trigger: GCAACTGGTTTGGCAACCCCACATCCAGGCCAATAA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTTTATTGGCCTGGATGTaGGGTTGCCAAACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPLLAWM*GCQTSC
Trigger: GCAACTGGTTTGGCAACCCCACATCCAGGCCAATAA...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTTATTGGCCTGGATGTaGGGTTGCCAAACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVLLAWM*GCQTSC
Trigger: GCAACTGGTTTGGCAACCCCACATCCAGGCCAATAA...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTTTATTGGCCTGGATGTaGGGTTGCCAAACCAGTTGC +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCLLAWM*GCQTSC
Trigger: GCAACTGGTTTGGCAACCCCACATCCAGGCCAATAA...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCTCACACATCTTTATTaGCCTGGATGTGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLLTHLY*PGCGVA
Trigger: GGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTCACACATCTTTATTaGCCTGGATGTGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVLTHLY*PGCGVA
Trigger: GGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGATCTTCTCGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGTTAGTCCCAGCTACTTaGAAGGCTGAAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: RSSRTGQSIRGAFPSAKSLVPAT*KAEAGG
Trigger: TCCTCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAA...CGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCAGATTCTCCACCATTTaGCCGCTCGCATTCTACGCA +
Preference number: 4 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFRFSTI*PLAFYA
Trigger: TGCGTAGAATGCGAGCGGCCAAATGGTGGAGAATCT...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594038.5
CDS-3UTR TCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCAGGAAACACACCGGTaGGAAAGTCATTCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSQETHR*ESHSRN
Trigger: GTTTCTGGAATGACTTTCTCACCGGTGTGTTTCCTG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVQAATL*SSPSVL
Trigger: TAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTG...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSQAATL*SSPSVL
Trigger: TAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVQAATL*SSPSVL
Trigger: TAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTG...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR TCA 90 bp ACATTTTCAGACAAGATCTTGGCTCCCCTCAGGGCTAGAGAGATGGAGGAGTGGAACAGATGCATTTGCTaGACAGGGATCTGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TFSDKILAPLRAREMEEWNRCIC*TGIWLV
Trigger: CACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTT...CCACTCCTCCATCTCTCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR GCA 90 bp GTCACTGACATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGCCATCATGTAATAGTTaGTGTTCACCATCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: VTDIIGRPPGLEPQVPLQPSCNS*CSPSAD
Trigger: ATCCGCTGATGGTGAACAGCAACTATTACATGATGG...CTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTATGTCAGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR GCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGTATGTCCAATCCCAGTaGAAGGAGTCCACCACCGGG +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQYVQSQ*KESTTG
Trigger: CCCGGTGGTGGACTCCTTGCACTGGGATTGGACATA...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CCA 90 bp GTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTAGGAACCAGGCAAGCTaGATGGCACTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VADVVFLDPWNPRGVEDLRNQAS*MALKRK
Trigger: TTTCCTCTTCAGTGCCATCCAGCTTGCCTGGTTCCT...AAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTAGTTGCAAGGCGATCTaGATGAAGCTGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPSCKAI*MKLSEE
Trigger: CTCTTCAGACAGCTTCATCCAGATCGCCTTGCAACT...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAAGTTGCAAGGCGATCTaGATGAAGCTGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSSCKAI*MKLSEE
Trigger: CTCTTCAGACAGCTTCATCCAGATCGCCTTGCAACT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVCVSQL*QFHPYS
Trigger: GGAATAAGGGTGAAATTGCCACAGCTGGCTGACACA...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCC +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCCVSQL*QFHPYS
Trigger: GGAATAAGGGTGAAATTGCCACAGCTGGCTGACACA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCACATCTTTATTGGCCTaGATGTGGGGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVTSLLA*MWGCQT
Trigger: GGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTACATCTTTATTGGCCTaGATGTGGGGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPTSLLA*MWGCQT
Trigger: GGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCACATCTTTATTGGCCTaGATGTGGGGTTGCCAAACC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVTSLLA*MWGCQT
Trigger: GGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
3UTR CAA 72 bp ATAGTCCGGGTAATTGTGGACGTCAAACAGATGCATTaGCTGAACAGGGATCTGGCTGGTGGACAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: IVRVIVDVKQMH*LNRDLAGGQLP
Trigger: TGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACGTCCACAATTACCCGGACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR TCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGAGAAGACGATTAGGGTaGAGGATTTGTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLRRRLG*RICQTS
Trigger: GCTGGTTTGACAAATCCTTCACCCTAATCGTCTTCT...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCAGAAGACGATTAGGGTaGAGGATTTGTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSRRRLG*RICQTS
Trigger: GCTGGTTTGACAAATCCTTCACCCTAATCGTCTTCT...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCAGAAGACGATTAGGGTaGAGGATTTGTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVRRRLG*RICQTS
Trigger: GCTGGTTTGACAAATCCTTCACCCTAATCGTCTTCT...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAAGAAGACGATTAGGGTaGAGGATTTGTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSRRRLG*RICQTS
Trigger: GCTGGTTTGACAAATCCTTCACCCTAATCGTCTTCT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTAGAAGACGATTAGGGTaGAGGATTTGTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPRRRLG*RICQTS
Trigger: GCTGGTTTGACAAATCCTTCACCCTAATCGTCTTCT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR TCA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGAAAGACCCCAGAAACGTaGGAGATGCCTTTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGKTPET*EMPFPG
Trigger: TCCTGGAAAAGGCATCTCTCACGTTTCTGGGGTCTT...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594038.5
ENST00000596922.5
ENST00000598259.5
CDS-3UTR GCA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCATCATGTAATAGTTaGTGTTCACCATCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQPSCNS*CSPSAD
Trigger: ATCCGCTGATGGTGAACAGCAACTATTACATGATGG...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CCA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGAGAATGGAACGACATaGCAGTCGACATTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCENGTT*QSTFSD
Trigger: GTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGAGAATGGAACGACATaGCAGTCGACATTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPENGTT*QSTFSD
Trigger: GTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGAGAATGGAACGACATaGCAGTCGACATTTTCAGAC +
Preference number: 4 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVENGTT*QSTFSD
Trigger: GTCTGAAAATGTCGACTGCCATGTCGTTCCATTCTC...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp GTGGCGGATGTAGTCTTTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTAGTTGCAAGGCGATCTaGATGAAGCTGTCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: VADVVFLDPWNPRGVEDLSCKAI*MKLSEE
Trigger: CTCTTCAGACAGCTTCATCCAGATCGCCTTGCAACT...AAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTTTTTTGCTGGAGATGTaGAAGGTGATCATGCCATCC +
Preference number: 4 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCFLLEM*KVIMPS
Trigger: GGATGGCATGATCACCTTCCACATCTCCAGCAAAAA...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTTTTTTGCTGGAGATGTaGAAGGTGATCATGCCATCC +
Preference number: 4 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCFLLEM*KVIMPS
Trigger: GGATGGCATGATCACCTTCCACATCTCCAGCAAAAA...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTTTTTGCTGGAGATGTaGAAGGTGATCATGCCATCC +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLFLLEM*KVIMPS
Trigger: GGATGGCATGATCACCTTCCACATCTCCAGCAAAAA...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CCA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGATTAGTCCCAGCTACTTaGAAGGCTGAAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGLVPAT*KAEAGG
Trigger: TCCTCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAA...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594038.5
ENST00000596922.5
ENST00000598259.5
CDS-3UTR GCA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCCATCATGTAATAGTTaGTGTTCACCATCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSPSCNS*CSPSAD
Trigger: ATCCGCTGATGGTGAACAGCAACTATTACATGATGG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTCCATCATGTAATAGTTaGTGTTCACCATCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPPSCNS*CSPSAD
Trigger: ATCCGCTGATGGTGAACAGCAACTATTACATGATGG...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGCCATCATGTAATAGTTaGTGTTCACCATCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLPSCNS*CSPSAD
Trigger: ATCCGCTGATGGTGAACAGCAACTATTACATGATGG...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR GCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGCCCAAATCTCCCGCTTaGATATGTCCAATCCCAGTG +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQPKSPA*ICPIPV
Trigger: CACTGGGATTGGACATATGCAAGCGGGAGATTTGGG...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGAGGAACCAGGCAAGCTaGATGGCACTGAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQRNQAS*MALKRK
Trigger: TTTCCTCTTCAGTGCCATCCAGCTTGCCTGGTTCCT...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGGTCTTTTTGGACCCCTaGAATCCGCGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQVFLDP*NPRGVE
Trigger: TTCAACACCACGCGGATTCCAGGGGTCCAAAAAGAC...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGTTAGTCCCAGCTACTTaGAAGGCTGAAGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQLVPAT*KAEAGG
Trigger: TCCTCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAA...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR TCA 90 bp AACTCTTTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTGGAGGAACCAGCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: NSLIFSISPKEGSSWRNQQAATL*SSPSVL
Trigger: TAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTG...CTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CAA 90 bp CCAGGGCCTCCGCTGCCTGGGTCTTCAGGGATGTCCGCACCTGGGCCCACGTGCGGGTCCGGGTGCCCCTaGCAGTGGCCGTCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: PGPPLPGSSGMSAPGPTCGSGCP*QWPSVE
Trigger: CTCAACAGACGGCCACTGCAAGGGGCACCCGGACCC...GCACGTGGGCCCAGGTGCGGACATCCCTGAAGACCCAGGCAGCGGAGGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS CCA 90 bp CACTGGGGCCCTCTCACCGGGGGTATCTCCTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCT +
Preference number: 5 (lower is better)
Translates to: HWGPLTGGISWRFRR*RYRRRAWTAFPARA
Trigger: AGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGGTGAGAGGGCCCCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS CCA 90 bp CCTGCGCCAGGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGTACAGCCAGGTCTTGGTGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PAPGPRSSRSPRRRG*AGPTPGTARSWWGR
Trigger: CCTCCCCCACCAAGACCTGGCTGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCTGGCGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599023.5
CDS CCA 90 bp CCTCCATCCCTAACCCACTGGGGCCCTCTCACCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCATGGACGGCA +
Preference number: 5 (lower is better)
Translates to: PPSLTHWGPLTGGIS*RFRRWRYRRRAWTA
Trigger: TGCCGTCCATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGGTGAGAGGGCCCCAGTGGGTTAGGGATGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS CCA 90 bp ACTTCAGCCCCGTCCGAGGTCAGCGAGGGTCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCACGCTGGAGCCCTGCTCTCCCAAGA +
Preference number: 5 (lower is better)
Translates to: TSAPSEVSEGRKPTA*CASAMSRWSPALPR
Trigger: TCTTGGGAGAGCAGGGCTCCAGCGTGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCGACCCTCGCTGACCTCGGACGGGGCTGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295404.9
ENST00000594587.5
ENST00000595969.5
ENST00000598259.5
ENST00000602019.5
CDS CCA 90 bp ACTTCAGCCCCGTCCGAGGTCAGCGAGGGTCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCACGCTGGAGCCGCTTTCAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TSAPSEVSEGRKPTA*CASAMSRWSRFQLP
Trigger: AGGCAGCTGAAAGCGGCTCCAGCGTGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCGACCCTCGCTGACCTCGGACGGGGCTGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392518.8
CDS-3UTR CAA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGCGGGTCGACGGGCCTTaGGAGTCCTGCCCACCCCGA +
Preference number: 5 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLRVDGP*ESCPPR
Trigger: TCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCG...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GAGCAGCTGTCAGAGCTGCCAGATGTTCCTCGTGGGGGCAGGCCGGTGAGGGATCCGGAGCCCGTGGTGTaGTCCACCCCAGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: EQLSELPDVPRGGRPVRDPEPVV*STPVRQ
Trigger: CTGCCTGACTGGGGTGGACAACACCACGGGCTCCGG...ATCCCTCACCGGCCTGCCCCCACGAGGAACATCTGGCAGCTCTGACAGCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp CCGACTCCAGGTACTTGCGCACGGTGTCCTGCACAGAGGGCACGGGCTGGCGTGGAAGACAGCCACGTGTaGGCTGTCATGGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: PTPGTCARCPAQRARAGVEDSHV*AVMEVA
Trigger: CGCCACCTCCATGACAGCCAACACGTGGCTGTCTTC...CACGCCAGCCCGTGCCCTCTGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp GGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCAGGTACTTGTCTGGAAGGTCCCATaGCAGCCGCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GPVEVLVGEDGPDRLQVLVWKVP*QPLGLG
Trigger: CCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGAC...AAGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCGGGTCGACGGGCCTTaGGAGTCCTGCCCACCCCGA +
Preference number: 5 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWRVDGP*ESCPPR
Trigger: TCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCG...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS TCA 90 bp AGGAGCGCAGGCCAGAGAGGTAGATCTCCTGCAGCACAGGGGCACTaGGTTCCACTTCAGCCCCGTCCGAGGTCAGCGAGGGTCGGAAGC +
Preference number: 5 (lower is better)
Translates to: RSAGQRGRSPAAQGH*VPLQPRPRSARVGS
Trigger: GCTTCCGACCCTCGCTGACCTCGGACGGGGCTGAAGTGGAACTCAGTGCCCCTGTGCTGCAGGAGATCTACCTCTCTGGCCTGCGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000295404.9
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000594038.5
ENST00000594587.5
ENST00000595568.5
ENST00000595969.5
ENST00000596922.5
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
ENST00000602019.5
CDS GCA 90 bp CCAGTGCAAGGAGTCCACCACCGGGTCGACGGGCCTTTGGAGTCCTaGCCACCCCGAGATCACCGTCACCCAGAAACCCCGATTCCTCTC +
Preference number: 5 (lower is better)
Translates to: PVQGVHHRVDGPLES*PPRDHRHPETPIPL
Trigger: GAGAGGAATCGGGGTTTCTGGGTGACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCGGTGGTGGACTCCTTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
CDS CCA 90 bp GTCCAATCCCAGTGCAAGGAGTCCACCACCGGGTCGACGGGCCTTTaGAGTCCTGCCCACCCCGAGATCACCGTCACCCAGAAACCCCGA +
Preference number: 5 (lower is better)
Translates to: VQSQCKESTTGSTGL*SPAHPEITVTQKPR
Trigger: TCGGGGTTTCTGGGTGACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCGGTGGTGGACTCCTTGCACTGGGATTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000596922.5
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
CDS CCA 90 bp GCCGGACCGACTCCAGGTACAGCCAGGTCTTGGTGGGGGAGGACATaGCTCCGTGGGGCTCAAGAAGCCAGCCGTGGTAGGACAGAAGCA +
Preference number: 5 (lower is better)
Translates to: AGPTPGTARSWWGRT*LRGAQEASRGRTEA
Trigger: TGCTTCTGTCCTACCACGGCTGGCTTCTTGAGCCCCACGGAGCCATGTCCTCCCCCACCAAGACCTGGCTGTACCTGGAGTCGGTCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599023.5
CDS-3UTR CAA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGGTCCGGGTGCCCCTaGCAGTGGCCGTCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAGSGCP*QWPSVE
Trigger: CTCAACAGACGGCCACTGCAAGGGGCACCCGGACCC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCGTCTGGAAGGTCCCATaGCAGCCGCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASVWKVP*QPLGLG
Trigger: CCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGAC...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCCCGGAGCCCGTGGTGTaGTCCACCCCAGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASPEPVV*STPVRQ
Trigger: CTGCCTGACTGGGGTGGACAACACCACGGGCTCCGG...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTCCGGAGCCCGTGGTGTaGTCCACCCCAGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCPEPVV*STPVRQ
Trigger: CTGCCTGACTGGGGTGGACAACACCACGGGCTCCGG...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGCGTGGGAGTTGCGGGGTCACGTaGAATCAAGGGTCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: QEEGMDGIPSASCLQRRGSCGVT*NQGSAD
Trigger: ATCAGCGGACCCTTGATTCAACGTGACCCCGCAACT...CCCACGCCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGGTCCGGGTGCCCCTaGCAGTGGCCGTCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGSGCP*QWPSVE
Trigger: CTCAACAGACGGCCACTGCAAGGGGCACCCGGACCC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS TCA 90 bp AGGGGCGCATTCCCATCAGCAAAGTCTGCAGGAAACCGTGGGCTGTaGGCTGCCTTCCAGGACCCACGTGGCCCAAAGGCCACAGGACCA +
Preference number: 5 (lower is better)
Translates to: RGAFPSAKSAGNRGL*AAFQDPRGPKATGP
Trigger: TGGTCCTGTGGCCTTTGGGCCACGTGGGTCCTGGAAGGCAGCTCACAGCCCACGGTTTCCTGCAGACTTTGCTGATGGGAATGCGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS GCA 90 bp TGCTTGTCCACTGCCACGCGGAACAGGGCGAGGCACTGTGGGTCCTaGAGTCCCCAGGGAGGTCACAGGTCATGGAAAGACAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: CLSTATRNRARHCGS*SPQGGHRSWKDRKS
Trigger: CGACTTCCTGTCTTTCCATGACCTGTGACCTCCCTGGGGACTGCAGGACCCACAGTGCCTCGCCCTGTTCCGCGTGGCAGTGGACAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595901.5
ENST00000596701.1
CDS-3UTR CAA 90 bp AGGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATGGGCCGGACCGACTCCGGAATCCGCGTGGTGTaGAAGATCTTCTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: RTAVQSKSSSERMGRTDSGIRVV*KIFSYW
Trigger: CCAGTACGAGAAGATCTTCAACACCACGCGGATTCC...GGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp CATCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAGGAGGAAGACAGCCACGTGTaGGCTGTCATGGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: HQQSRGYLLAVQAVAVQEEDSHV*AVMEVA
Trigger: CGCCACCTCCATGACAGCCAACACGTGGCTGTCTTC...CTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp GCAGGTACCACTGCAGCAGCGACGCCTGCAGCCTCAGGAATTCCTGCGCCAGGACCGGAAGTGGGCCAGTaGCAAGGCGATCTGGATGAA +
Preference number: 5 (lower is better)
Translates to: AGTTAAATPAASGIPAPGPEVGQ*QGDLDE
Trigger: TTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGG...TCCTGGCGCAGGAATTCCTGAGGCTGCAGGCGTCGCTGCTGCAGTGGTACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCGGGTCGACGGGCCTTaGGAGTCCTGCCCACCCCGA +
Preference number: 5 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSRVDGP*ESCPPR
Trigger: TCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCG...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GGGCTGGCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGACCCCAAATCTCCCGCTaGCATATGTCCAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: GLAWQGALVTEQHRVAARPQISR*HMSNPS
Trigger: ACTGGGATTGGACATATGCAAGCGGGAGATTTGGGG...TCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGATGTCATTGAGGCCTaGGAGGCCCCAGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWDVIEA*EAPVWR
Trigger: CCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGAGTCGGTGGATGTCATaGAGGCCTTGGAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLSRWMS*RPWRPQ
Trigger: CTGGGGCCTCCAAGGCCTCAATGACATCCACCGACT...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGGCCTGGATGTGGGGTaGCCAAACCAGTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWGLDVG*PNQLPL
Trigger: CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGCCTGGATGTGGGGTaGCCAAACCAGTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAGLDVG*PNQLPL
Trigger: CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS GCA 90 bp CGCATTCCCATCAGCAAAGTCTGCAGGAAACCGTGGGCTGTGAGCTaGCTTCCAGGACCCACGTGGCCCAAAGGCCACAGGACCACACCT +
Preference number: 5 (lower is better)
Translates to: RIPISKVCRKPWAVS*LPGPTWPKGHRTTP
Trigger: AGGTGTGGTCCTGTGGCCTTTGGGCCACGTGGGTCCTGGAAGGCAGCTCACAGCCCACGGTTTCCTGCAGACTTTGCTGATGGGAATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS GCA 90 bp TGCCTGGAGTTCTCCTTCCCTGACCCTCTGAACCGGCGCTTAAAATaGTGTCCCGCCTGGAACAGGGAGGCCACATCCAGCAGTGCGTCC +
Preference number: 5 (lower is better)
Translates to: CLEFSFPDPLNRRLK*CPAWNREATSSSAS
Trigger: GGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000597099.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS CCA 90 bp GAGCATAAGGGGCGCATTCCCATCAGCAAAGTCTGCAGGAAACCGTaGGCTGTGAGCTGCCTTCCAGGACCCACGTGGCCCAAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: EHKGRIPISKVCRKP*AVSCLPGPTWPKGH
Trigger: GTGGCCTTTGGGCCACGTGGGTCCTGGAAGGCAGCTCACAGCCCACGGTTTCCTGCAGACTTTGCTGATGGGAATGCGCCCCTTATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS-3UTR CAA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGAAGACAGCCACGTGTaGGCTGTCATGGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAEDSHV*AVMEVA
Trigger: CGCCACCTCCATGACAGCCAACACGTGGCTGTCTTC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGGTCCGGGTGCCCCTaGCAGTGGCCGTCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQGSGCP*QWPSVE
Trigger: CTCAACAGACGGCCACTGCAAGGGGCACCCGGACCC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGGGTCCGGGTGCCCCTaGCAGTGGCCGTCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPGSGCP*QWPSVE
Trigger: CTCAACAGACGGCCACTGCAAGGGGCACCCGGACCC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGTCTGGAAGGTCCCATaGCAGCCGCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQVWKVP*QPLGLG
Trigger: CCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGAC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCCGGGTCGACGGGCCTTaGGAGTCCTGCCCACCCCGA +
Preference number: 5 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFRVDGP*ESCPPR
Trigger: TCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCG...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CAA 90 bp AGATCTTCTCGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGCGGGTCGACGGGCCTTaGGAGTCCTGCCCACCCCGA +
Preference number: 5 (lower is better)
Translates to: RSSRTGQSIRGAFPSAKSRVDGP*ESCPPR
Trigger: TCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCG...CGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCGGAGCCCGTGGTGTaGTCCACCCCAGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQPEPVV*STPVRQ
Trigger: CTGCCTGACTGGGGTGGACAACACCACGGGCTCCGG...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCAGTCGGTGGATGTCATaGAGGCCTTGGAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASSRWMS*RPWRPQ
Trigger: CTGGGGCCTCCAAGGCCTCAATGACATCCACCGACT...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS TCA 90 bp AGGCCAGCTGCCTGCTGGAAGGAGTCAGAAGTCGGTGGATGTCATTaGGGCCTTGGAGGCCCCAGTCTGGCGGGAGAGAAATCCACACCT +
Preference number: 5 (lower is better)
Translates to: RPAACWKESEVGGCH*GLGGPSLAGEKSTP
Trigger: AGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS TCA 90 bp GGGGCCAGCGCGCCCAGCTCCACTCACAGGCCCGAATCCACCGCCTaGGGAAACATAGTCCGGGTAATTGTGGACGTCAAACAGATGCAT +
Preference number: 5 (lower is better)
Translates to: GASAPSSTHRPESTA*GNIVRVIVDVKQMH
Trigger: ATGCATCTGTTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGTGAGTGGAGCTGGGCGCGCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598072.1
CDS GCA 90 bp TCGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCTaGAGGAAACCGTGGGCTGTGAGCTGCCTTCCAGGACCCACGTGG +
Preference number: 5 (lower is better)
Translates to: SYWAEHKGRIPISKV*RKPWAVSCLPGPTW
Trigger: CCACGTGGGTCCTGGAAGGCAGCTCACAGCCCACGGTTTCCTGCAGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS GCA 90 bp GAGGCCTTGGAGGCCCCAGTCTGGCGGGAGAGAAATCCACACCTGTaGCTGGAGTTCTCCTTCCCTGACCCTCTGAACCGGCGCTTAAAA +
Preference number: 5 (lower is better)
Translates to: EALEAPVWRERNPHL*LEFSFPDPLNRRLK
Trigger: TTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS CCA 90 bp TCCTTCCCTGACCCTCTGAACCGGCGCTTAAAATGCTGTCCCGCCTaGAACAGGGAGGCCACATCCAGCAGTGCGTCCTCAATGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SFPDPLNRRLKCCPA*NREATSSSASSMCC
Trigger: GCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000597099.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS CCA 90 bp TTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGTCAGAAGTCGGTaGATGTCATTGAGGCCTTGGAGGCCCCAGTCTGGCGGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: FLGEASCLLEGVRSR*MSLRPWRPQSGGRE
Trigger: TTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS-3UTR CAA 90 bp GCGGTACAGGAGGAGGGCATGGACGGCATTCCCAGCGCGAGCTGCCTGCAGAGGTCAGGCAGCAACTCTTaGATCTTCTCCATCAGTCCT +
Preference number: 5 (lower is better)
Translates to: AVQEEGMDGIPSASCLQRSGSNS*IFSISP
Trigger: AGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGA...CCTCTGCAGGCAGCTCGCGCTGGGAATGCCGTCCATGCCCTCCTCCTGTACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGACCGACTCCAGGTACTaGCGCACGGTGTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQTDSRY*RTVSCT
Trigger: TGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGT...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGCGGATGTAGTCTTTTaGGACCCCTGGAATCCGCGT +
Preference number: 5 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLADVVF*DPWNPR
Trigger: ACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGC...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GCGTGGCAGGGAGCGCTGGTAACTGAACAGCATCGGGTGGCGGCCAGAGAAGATGCGGATGTAGTCTTTTaGGACCCCTGGAATCCGCGT +
Preference number: 5 (lower is better)
Translates to: AWQGALVTEQHRVAAREDADVVF*DPWNPR
Trigger: ACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGC...ATCTTCTCTGGCCGCCACCCGATGCTGTTCAGTTACCAGCGCTCCCTGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCGGGTCCGGGTGCCCCTaGCAGTGGCCGTCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSGSGCP*QWPSVE
Trigger: CTCAACAGACGGCCACTGCAAGGGGCACCCGGACCC...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCTGGAAGGTCCCATaGCAGCCGCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCVWKVP*QPLGLG
Trigger: CCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGAC...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCGTCTGGAAGGTCCCATaGCAGCCGCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVVWKVP*QPLGLG
Trigger: CCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGAC...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTCTGGAAGGTCCCATaGCAGCCGCTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPVWKVP*QPLGLG
Trigger: CCCCAGCCCCAGCGGCTGCAATGGGACCTTCCAGAC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGCCGGAAGTGGGCCAGTaGCAAGGCGATCTGGATGAA +
Preference number: 5 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWPEVGQ*QGDLDE
Trigger: TTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGG...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGCCGGAGCCCGTGGTGTaGTCCACCCCAGTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVPEPVV*STPVRQ
Trigger: CTGCCTGACTGGGGTGGACAACACCACGGGCTCCGG...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGATGGCCCTGACAAAGTaGCAGGCCTCCCTCGTGCAA +
Preference number: 5 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVMALTK*QASLVQ
Trigger: TTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCAT...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCATGGCCCTGACAAAGTaGCAGGCCTCCCTCGTGCAA +
Preference number: 5 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASMALTK*QASLVQ
Trigger: TTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCAT...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGGGTCCGTCTTCTCTTaGTCCTCCATGGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWGSVFS*SSMALT
Trigger: TGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS TCA 90 bp CTGGCGGGAGAGAAATCCACACCTGTGCCTGGAGTTCTCCTTCCCTaGCCCTCTGAACCGGCGCTTAAAATGCTGTCCCGCCTGGAACAG +
Preference number: 5 (lower is better)
Translates to: LAGEKSTPVPGVLLP*PSEPALKMLSRLEQ
Trigger: CTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCTCTCCCGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS GCA 90 bp CTTAAAATGCTGTCCCGCCTGGAACAGGGAGGCCACATCCAGCAGTaGGTCCTCAATGTGCTGCCCCAGCCTGTGGGAATCCTGGAAGGA +
Preference number: 5 (lower is better)
Translates to: LKMLSRLEQGGHIQQ*VLNVLPQPVGILEG
Trigger: TCCTTCCAGGATTCCCACAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598647.1
CDS CCA 90 bp CCTCCTCCAGCCAGCCCAAGAATGGTTGGAAGAGAGAATTCAAGATaGCCGACCCACAATGGCAGCGACCACAAGGAACCGTGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PPPASPRMVGRENSR*PTHNGSDHKEPWRG
Trigger: GCCCCTCCACGGTTCCTTGTGGTCGCTGCCATTGTGGGTCGGCCATCTTGAATTCTCTCTTCCAACCATTCTTGGGCTGGCTGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596701.1
ENST00000599023.5
CDS-3UTR CAA 90 bp CCAGTCACTGACATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGACCGACTCCAGGTACTaGCGCACGGTGTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: PVTDIIGRPPGLEPQVPLTDSRY*RTVSCT
Trigger: TGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGT...CAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTATGTCAGTGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp CCTCCCTCGTGCAAGACCGCACCGTCTCCGTCCGGCCTTCCAGGAATAAGCGAGCGTCGGATGAAGCTCTaGCCAAATAGGGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: PPSCKTAPSPSGLPGISERRMKL*PNRENG
Trigger: TCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACG...CTCGCTTATTCCTGGAAGGCCGGACGGAGACGGTGCGGTCTTGCACGAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGACGCTGGAGCCCACGTaGAATCAAGGGTCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQTLEPT*NQGSAD
Trigger: ATCAGCGGACCCTTGATTCAACGTGGGCTCCAGCGT...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323446.9
CDS-3UTR CAA 90 bp CAGGAGTGCTCCACGCTGAGGCCCAGCTTCCCGTTAGAGAAGACGATTAGGGTGATGGCCCTGACAAAGTaGCAGGCCTCCCTCGTGCAA +
Preference number: 5 (lower is better)
Translates to: QECSTLRPSFPLEKTIRVMALTK*QASLVQ
Trigger: TTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCAT...CACCCTAATCGTCTTCTCTAACGGGAAGCTGGGCCTCAGCGTGGAGCACTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp ATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGGGGTCCGTCTTCTCTTaGTCCTCCATGGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: IGLDVGLPNQLPLSCVSQGSVFS*SSMALT
Trigger: TGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCC...CTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGCAGAGCCTGGTGCTaGTCCACTGCCACGCGGAAC +
Preference number: 5 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRSRAWC*STATRN
Trigger: GTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGAGCAGAGCCTGGTGCTaGTCCACTGCCACGCGGAAC +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQSRAWC*STATRN
Trigger: GTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCT...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGATGTCATTGAGGCCTaGGAGGCCCCAGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPDVIEA*EAPVWR
Trigger: CCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGATGTCATTGAGGCCTaGGAGGCCCCAGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPDVIEA*EAPVWR
Trigger: CCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGCCTGGATGTGGGGTaGCCAAACCAGTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQGLDVG*PNQLPL
Trigger: CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS TCA 90 bp ACAGGGATCTGGCTGGTGGACAGCTGCCACTGCTCCGAATGGACCTaGGGACAGGAGCCCATCACATGTGCAGGACAGAGATCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: TGIWLVDSCHCSEWT*GQEPITCAGQRSAV
Trigger: AACTGCAGATCTCTGTCCTGCACATGTGATGGGCTCCTGTCCTCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598647.1
ENST00000599937.5
CDS GCA 90 bp CCCCAGAGTCCAAACTCCTTCCATGGAACCACAATACCTTGTAGGTaGGGGGCTAGGTGTAGGGCAAGGGAGAAGAGGTGCAGGGCAGGT +
Preference number: 5 (lower is better)
Translates to: PQSPNSFHGTTIPCR*GARCRAREKRCRAG
Trigger: ACCTGCCCTGCACCTCTTCTCCCTTGCCCTACACCTAGCCCCGCACCTACAAGGTATTGTGGTTCCATGGAAGGAGTTTGGACTCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000596701.1
CDS CCA 90 bp CCCAAGAATGGTTGGAAGAGAGAATTCAAGATGGCCGACCCACAATaGCAGCGACCACAAGGAACCGTGGAGGGGCAGGTCTTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: PKNGWKREFKMADPQ*QRPQGTVEGQVLGA
Trigger: AGCCCCCAAGACCTGCCCCTCCACGGTTCCTTGTGGTCGCTGCCATTGTGGGTCGGCCATCTTGAATTCTCTCTTCCAACCATTCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295404.9
ENST00000596701.1
ENST00000599023.5
CDS CCA 90 bp AGTCAGAAGTCGGTGGATGTCATTGAGGCCTTGGAGGCCCCAGTCTaGCGGGAGAGAAATCCACACCTGTGCCTGGAGTTCTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: SQKSVDVIEALEAPV*RERNPHLCLEFSFP
Trigger: AGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS CCA 90 bp GTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTaGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: VGLPNQLPLSCVSQL*QFHPYSLERPAACC
Trigger: ACAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597099.1
CDS-3UTR CAA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGGAATCCGCGTGGTGTaGAAGATCTTCTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWGIRVV*KIFSYW
Trigger: CCAGTACGAGAAGATCTTCAACACCACGCGGATTCC...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGGAATCCGCGTGGTGTaGAAGATCTTCTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVGIRVV*KIFSYW
Trigger: CCAGTACGAGAAGATCTTCAACACCACGCGGATTCC...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp ATAATTGGACGCCCACCAGGACTTGAGCCGCAGGTACCACTGCAGCAGCGACGCGGAATCCGCGTGGTGTaGAAGATCTTCTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: IIGRPPGLEPQVPLQQRRGIRVV*KIFSYW
Trigger: CCAGTACGAGAAGATCTTCAACACCACGCGGATTCC...GCGTCGCTGCTGCAGTGGTACCTGCGGCTCAAGTCCTGGTGGGCGTCCAATTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGGAATCCGCGTGGTGTaGAAGATCTTCTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAGIRVV*KIFSYW
Trigger: CCAGTACGAGAAGATCTTCAACACCACGCGGATTCC...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGAAGACAGCCACGTGTaGGCTGTCATGGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: AVAISPLFLGEASCLLEGEDSHV*AVMEVA
Trigger: CGCCACCTCCATGACAGCCAACACGTGGCTGTCTTC...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTTTTCAGACAAGATCTaGGCTCCCCTCAGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: GLDVGLPNQLPLSCVSQLFSDKI*APLRAR
Trigger: TCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAA...CAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGCCCCAAATCTCCCGCTaGCATATGTCCAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVPQISR*HMSNPS
Trigger: ACTGGGATTGGACATATGCAAGCGGGAGATTTGGGG...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp TGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTCCCCAAATCTCCCGCTaGCATATGTCCAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: WPGCGVAKPVAPVLCQPAPQISR*HMSNPS
Trigger: ACTGGGATTGGACATATGCAAGCGGGAGATTTGGGG...AGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGAGCAGAGCCTGGTGCTaGTCCACTGCCACGCGGAAC +
Preference number: 5 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVSRAWC*STATRN
Trigger: GTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCT...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTAGCAGAGCCTGGTGCTaGTCCACTGCCACGCGGAAC +
Preference number: 5 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCSRAWC*STATRN
Trigger: GTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCT...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp AGATCTTCTCGTACTGGGCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCGAGCAGAGCCTGGTGCTaGTCCACTGCCACGCGGAAC +
Preference number: 5 (lower is better)
Translates to: RSSRTGQSIRGAFPSAKSSRAWC*STATRN
Trigger: GTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCT...CGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGCCCAGTACGAGAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGATGTCATTGAGGCCTaGGAGGCCCCAGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCDVIEA*EAPVWR
Trigger: CCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGATGTCATTGAGGCCTaGGAGGCCCCAGTCTGGCGG +
Preference number: 5 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPDVIEA*EAPVWR
Trigger: CCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGGGTTGCCAAACCAGTaGCCCCTGTCCTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRGLPNQ*PLSCVS
Trigger: GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGGTTGCCAAACCAGTaGCCCCTGTCCTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQGLPNQ*PLSCVS
Trigger: GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCC...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGCCTGGATGTGGGGTaGCCAAACCAGTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPGLDVG*PNQLPL
Trigger: CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGGCCTGGATGTGGGGTaGCCAAACCAGTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLGLDVG*PNQLPL
Trigger: CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp GCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGCTCACACATCTTTATaGGCCTGGATGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: AWMWGCQTSCPCPVSASCAHTSL*AWMWGC
Trigger: GCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC...ACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS CCA 90 bp CCCTGTCCTGTGTCAGCCAGCTGTGGCAATTTCACCCTTATTCCTTaGAGAGGCCAGCTGCCTGCTGGAAGGAGTCAGAAGTCGGTGGAT +
Preference number: 5 (lower is better)
Translates to: PCPVSASCGNFTLIP*RGQLPAGRSQKSVD
Trigger: ATCCACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS CCA 90 bp AGGTTCACACAGCCAGGGAGAGCCAGGCGGGTTCCTAGGTGTGTCTaGCCCCAGAGTCCAAACTCCTTCCATGGAACCACAATACCTTGT +
Preference number: 5 (lower is better)
Translates to: RFTQPGRARRVPRCV*PQSPNSFHGTTIPC
Trigger: ACAAGGTATTGTGGTTCCATGGAAGGAGTTTGGACTCTGGGGCCAGACACACCTAGGAACCCGCCTGGCTCTCCCTGGCTGTGTGAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596701.1
CDS-3UTR CAA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAACCGACTCCAGGTACTaGCGCACGGTGTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSTDSRY*RTVSCT
Trigger: TGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp TTTTGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGACCGACTCCAGGTACTaGCGCACGGTGTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: FWTPGIRVVLKIFSYWAETDSRY*RTVSCT
Trigger: TGTGCAGGACACCGTGCGCAAGTACCTGGAGTCGGT...CTCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGAAGACAGCCACGTGTaGGCTGTCATGGAGGTGGCG +
Preference number: 5 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLEDSHV*AVMEVA
Trigger: CGCCACCTCCATGACAGCCAACACGTGGCTGTCTTC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGCGTCGGATGAAGCTCTaGCCAAATAGGGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVRRMKL*PNRENG
Trigger: TCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACG...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCGGAAGTGGGCCAGTaGCAAGGCGATCTGGATGAA +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQPEVGQ*QGDLDE
Trigger: TTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGG...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp GCTGTTCACCATCAGCGGATTTCGGGAGCGCAGGTACACAAATTCCTCCCACCAGGGTCCGTCTTCTCTTaGTCCTCCATGGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: AVHHQRISGAQVHKFLPPGSVFS*SSMALT
Trigger: TGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCC...TGGTGGGAGGAATTTGTGTACCTGCGCTCCCGAAATCCGCTGATGGTGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp TCATGGCTGCCTTCAGCAGAGCCTGGTGCTTGTCCACTGCCACGCGGAACAGGGGTCAAACAGATGCATTaGCTGAACAGGGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: SWLPSAEPGACPLPRGTGVKQMH*LNRDLA
Trigger: AGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGAC...CCCTGTTCCGCGTGGCAGTGGACAAGCACCAGGCTCTGCTGAAGGCAGCCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTAGTCGGTGGATGTCATaGAGGCCTTGGAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCSRWMS*RPWRPQ
Trigger: CTGGGGCCTCCAAGGCCTCAATGACATCCACCGACT...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGAGTCGGTGGATGTCATaGAGGCCTTGGAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVSRWMS*RPWRPQ
Trigger: CTGGGGCCTCCAAGGCCTCAATGACATCCACCGACT...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGAGTCGGTGGATGTCATaGAGGCCTTGGAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLSRWMS*RPWRPQ
Trigger: CTGGGGCCTCCAAGGCCTCAATGACATCCACCGACT...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGGGTTGCCAAACCAGTaGCCCCTGTCCTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLGLPNQ*PLSCVS
Trigger: GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCC...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCGGGTTGCCAAACCAGTaGCCCCTGTCCTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSGLPNQ*PLSCVS
Trigger: GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCC...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTGGGTTGCCAAACCAGTaGCCCCTGTCCTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCGLPNQ*PLSCVS
Trigger: GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCC...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGGGTTGCCAAACCAGTaGCCCCTGTCCTGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSGLPNQ*PLSCVS
Trigger: GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCC...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS GCA 90 bp TGCGCTTCAGCCATGTCACGCTGGAGCCGCTTTCAGCTGCCTTTTTaGGCCGACCCAGGACTACATAACCTAGCTCATCCTTCTCTAAGC +
Preference number: 5 (lower is better)
Translates to: CASAMSRWSRFQLPF*ADPGLHNLAHPSLS
Trigger: GCTTAGAGAAGGATGAGCTAGGTTATGTAGTCCTGGGTCGGCGCAAAAAGGCAGCTGAAAGCGGCTCCAGCGTGACATGGCTGAAGCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392518.8
CDS-3UTR CAA 90 bp CTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGGTCAGGCAGCAACTCTTaGATCTTCTCCATCAGTCCT +
Preference number: 5 (lower is better)
Translates to: LDVGLPNQLPLSCVSQLWSGSNS*IFSISP
Trigger: AGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGA...CCACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGCGGATGTAGTCTTTTaGGACCCCTGGAATCCGCGT +
Preference number: 5 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPADVVF*DPWNPR
Trigger: ACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp TGGACCCCTGGAATCCGCGTGGTGTTGAAGATCTTCTCGTACTGGGCAGAGCATGCGGATGTAGTCTTTTaGGACCCCTGGAATCCGCGT +
Preference number: 5 (lower is better)
Translates to: WTPGIRVVLKIFSYWAEHADVVF*DPWNPR
Trigger: ACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGC...ATGCTCTGCCCAGTACGAGAAGATCTTCAACACCACGCGGATTCCAGGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000595568.5
ENST00000598259.5
CDS-3UTR CAA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTCCGGAAGTGGGCCAGTaGCAAGGCGATCTGGATGAA +
Preference number: 5 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPPEVGQ*QGDLDE
Trigger: TTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGG...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCCGGAAGTGGGCCAGTaGCAAGGCGATCTGGATGAA +
Preference number: 5 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLPEVGQ*QGDLDE
Trigger: TTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGG...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGATGGCCCTGACAAAGTaGCAGGCCTCCCTCGTGCAA +
Preference number: 5 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVMALTK*QASLVQ
Trigger: TTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCAT...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGATGGCCCTGACAAAGTaGCAGGCCTCCCTCGTGCAA +
Preference number: 5 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLMALTK*QASLVQ
Trigger: TTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCAT...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTATGGCCCTGACAAAGTaGCAGGCCTCCCTCGTGCAA +
Preference number: 5 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPMALTK*QASLVQ
Trigger: TTGCACGAGGGAGGCCTGCAACTTTGTCAGGGCCAT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGGTCCGTCTTCTCTTaGTCCTCCATGGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPGSVFS*SSMALT
Trigger: TGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGGGTCCGTCTTCTCTTaGTCCTCCATGGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLGSVFS*SSMALT
Trigger: TGTCAGGGCCATGGAGGACAAAGAGAAGACGGACCC...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp TTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCGTCAAACAGATGCATTaGCTGAACAGGGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: LAWMWGCQTSCPCPVSASVKQMH*LNRDLA
Trigger: AGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGAC...GCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GGAACGACATGGCAGTCGACATTTTCAGACAAGATCTTGGCTCCCCTCAGGGCTCTGGTCCAGGCTGAGTaGCGGGGTCACGTTGAATCA +
Preference number: 5 (lower is better)
Translates to: GTTWQSTFSDKILAPLRALVQAE*RGHVES
Trigger: TGATTCAACGTGACCCCGCAACTCAGCCTGGACCAG...AGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAATGTCGACTGCCATGTCGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTCAGCCGTCTTCTCTTaGTCCTCCATGGCCCTGACA +
Preference number: 5 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPSAVFS*SSMALT
Trigger: TGTCAGGGCCATGGAGGACAAAGAGAAGACGGCTGA...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595031.1
CDS-3UTR CAA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGCGGATGTAGTCTTTTaGGACCCCTGGAATCCGCGT +
Preference number: 5 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLADVVF*DPWNPR
Trigger: ACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGC...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCGCGGATGTAGTCTTTTaGGACCCCTGGAATCCGCGT +
Preference number: 5 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVADVVF*DPWNPR
Trigger: ACGCGGATTCCAGGGGTCCAAAAAGACTACATCCGC...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCAGCTGTGATTAGGGTGAAGGATTaGTCAAACCAGCGATCATGG +
Preference number: 5 (lower is better)
Translates to: PGCGVAKPVAPVLCQPAVIRVKD*SNQRSW
Trigger: CCATGATCGCTGGTTTGACAAATCCTTCACCCTAAT...CACAGCTGGCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TTCCCATCAGCAAAGTCGGGGGTATCTCCTGGCGGTTCAGGCGGTGGCGGTACAATTAGGGTGAAGGATTaGTCAAACCAGCGATCATGG +
Preference number: 5 (lower is better)
Translates to: FPSAKSGVSPGGSGGGGTIRVKD*SNQRSW
Trigger: CCATGATCGCTGGTTTGACAAATCCTTCACCCTAAT...TGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGACTTTGCTGATGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCCCAAATCTCCCGCTaGCATATGTCCAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQPQISR*HMSNPS
Trigger: ACTGGGATTGGACATATGCAAGCGGGAGATTTGGGG...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGATAAGTCAGGCAGAATaGACCCCTGTCCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRISQAE*TPVPEV
Trigger: CACTTCCGGGACAGGGGTCAATTCTGCCTGACTTAT...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGGCTCACACATCTTTATaGGCCTGGATGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRAHTSL*AWMWGC
Trigger: GCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGATTCGGGACCTCACGTaGAATCAAGGGTCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQIRDLT*NQGSAD
Trigger: ATCAGCGGACCCTTGATTCAACGTGAGGTCCCGAAT...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCGTAGACCCGGAGGTTTaGAGGGAAGGACGTCAATTC +
Preference number: 5 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPVDPEV*REGRQF
Trigger: GAATTGACGTCCTTCCCTCAAAACCTCCGGGTCTAC...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCCAGATTCTCCACCATTaGGCCGCTCGCATTCTACGC +
Preference number: 5 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFQILHH*AARILR
Trigger: GCGTAGAATGCGAGCGGCCAAATGGTGGAGAATCTG...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594038.5
CDS TCA 90 bp GCCGACCCAGGACTACATAACCTAGCTCATCCTTCTCTAAGCACCTaGAGGGTCTTGAGGGTCCTGGTTTGTAGACCCGGAGGTTTTGAG +
Preference number: 5 (lower is better)
Translates to: ADPGLHNLAHPSLST*RVLRVLVCRPGGFE
Trigger: CTCAAAACCTCCGGGTCTACAAACCAGGACCCTCAAGACCCTTCAGGTGCTTAGAGAAGGATGAGCTAGGTTATGTAGTCCTGGGTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392518.8
CDS-3UTR CAA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGGAATCCGCGTGGTGTaGAAGATCTTCTCGTACTGG +
Preference number: 5 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPGIRVV*KIFSYW
Trigger: CCAGTACGAGAAGATCTTCAACACCACGCGGATTCC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGATTTTCAGACAAGATCTaGGCTCCCCTCAGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: AVAISPLFLGEASCLLEGFSDKI*APLRAR
Trigger: TCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAA...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CCACGTGTTGGCTGTCATGGAGGTGGCGGATGTAGTCTTTTTGGACCCCTGGAATTTTCAGACAAGATCTaGGCTCCCCTCAGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: PRVGCHGGGGCSLFGPLEFSDKI*APLRAR
Trigger: TCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAA...TTCCAGGGGTCCAAAAAGACTACATCCGCCACCTCCATGACAGCCAACACGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000598259.5
CDS-3UTR CAA 90 bp CCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCCGTCGGATGAAGCTCTaGCCAAATAGGGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: PAHTSLLAWMWGCQTSCPRRMKL*PNRENG
Trigger: TCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACG...GGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGCCGTCGGATGAAGCTCTaGCCAAATAGGGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: FIGLDVGLPNQLPLSCVSRRMKL*PNRENG
Trigger: TCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACG...GCTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGCGTCGGATGAAGCTCTaGCCAAATAGGGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: SCGNFTLIPWRGQLPAGRRRMKL*PNRENG
Trigger: TCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACG...CCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGAACGCTGGAGCCCACGTaGAATCAAGGGTCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGTLEPT*NQGSAD
Trigger: ATCAGCGGACCCTTGATTCAACGTGGGCTCCAGCGT...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596922.5
CDS-3UTR CAA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGATAAGTCAGGCAGAATaGACCCCTGTCCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLISQAE*TPVPEV
Trigger: CACTTCCGGGACAGGGGTCAATTCTGCCTGACTTAT...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCATAAGTCAGGCAGAATaGACCCCTGTCCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVISQAE*TPVPEV
Trigger: CACTTCCGGGACAGGGGTCAATTCTGCCTGACTTAT...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAATAAGTCAGGCAGAATaGACCCCTGTCCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: SLLAWMWGCQTSCPCPVSISQAE*TPVPEV
Trigger: CACTTCCGGGACAGGGGTCAATTCTGCCTGACTTAT...TGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTATAAGTCAGGCAGAATaGACCCCTGTCCCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: HLYWPGCGVAKPVAPVLCISQAE*TPVPEV
Trigger: CACTTCCGGGACAGGGGTCAATTCTGCCTGACTTAT...ACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGGCTCACACATCTTTATaGGCCTGGATGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: TSLLAWMWGCQTSCPCPVAHTSL*AWMWGC
Trigger: GCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC...CACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGCTCACACATCTTTATaGGCCTGGATGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: HTSLLAWMWGCQTSCPCPAHTSL*AWMWGC
Trigger: GCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC...AGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGGCTCACACATCTTTATaGGCCTGGATGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLAHTSL*AWMWGC
Trigger: GCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGCTCACACATCTTTATaGGCCTGGATGTGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPAHTSL*AWMWGC
Trigger: GCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCATTCGGGACCTCACGTaGAATCAAGGGTCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVIRDLT*NQGSAD
Trigger: ATCAGCGGACCCTTGATTCAACGTGAGGTCCCGAAT...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTATTCGGGACCTCACGTaGAATCAAGGGTCCGCTGAT +
Preference number: 5 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCIRDLT*NQGSAD
Trigger: ATCAGCGGACCCTTGATTCAACGTGAGGTCCCGAAT...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCGTAGACCCGGAGGTTTaGAGGGAAGGACGTCAATTC +
Preference number: 5 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSVDPEV*REGRQF
Trigger: GAATTGACGTCCTTCCCTCAAAACCTCCGGGTCTAC...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTAGACCCGGAGGTTTaGAGGGAAGGACGTCAATTC +
Preference number: 5 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPVDPEV*REGRQF
Trigger: GAATTGACGTCCTTCCCTCAAAACCTCCGGGTCTAC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCGTAGACCCGGAGGTTTaGAGGGAAGGACGTCAATTC +
Preference number: 5 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFVDPEV*REGRQF
Trigger: GAATTGACGTCCTTCCCTCAAAACCTCCGGGTCTAC...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594038.5
CDS CCA 90 bp TCCTCGTGGAGGCTGGCTTCAGTAGGTCCCATCAACGTTTGCAAGTaGATGAGTGAGTACACAGAAATAACTGAAGCCTCAAGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: SSWRLASVGPINVCK*MSEYTEITEASSEG
Trigger: GCCCTCGCTTGAGGCTTCAGTTATTTCTGTGTACTCACTCATCCACTTGCAAACGTTGATGGGACCTACTGAAGCCAGCCTCCACGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596701.1
ENST00000599023.5
CDS-3UTR CAA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTCAGGCAGCAACTCTTaGATCTTCTCCATCAGTCCT +
Preference number: 5 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPSGSNS*IFSISP
Trigger: AGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp AGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTTTTCAGACAAGATCTaGGCTCCCCTCAGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: SSHIFIGLDVGLPNQLPLFSDKI*APLRAR
Trigger: TCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAA...CAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp GCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTTTTTCAGACAAGATCTaGGCTCCCCTCAGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: AHTSLLAWMWGCQTSCPCFSDKI*APLRAR
Trigger: TCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAA...ACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCTTTTCAGACAAGATCTaGGCTCCCCTCAGGGCTAGA +
Preference number: 5 (lower is better)
Translates to: LTHLYWPGCGVAKPVAPVFSDKI*APLRAR
Trigger: TCTAGCCCTGAGGGGAGCCAAGATCTTGTCTGAAAA...GACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCCGTCGGATGAAGCTCTaGCCAAATAGGGAGAATGGA +
Preference number: 5 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSRRMKL*PNRENG
Trigger: TCCATTCTCCCTATTTGGCAAGAGCTTCATCCGACG...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAGTCAAACAGATGCATTaGCTGAACAGGGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: AVAISPLFLGEASCLLEGVKQMH*LNRDLA
Trigger: AGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGAC...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCGTCAAACAGATGCATTaGCTGAACAGGGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPVKQMH*LNRDLA
Trigger: AGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGAC...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCTCAGGCAGCAACTCTTaGATCTTCTCCATCAGTCCT +
Preference number: 5 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVSGSNS*IFSISP
Trigger: AGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGA...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS-3UTR CAA 90 bp AGGAAAAGCCAACTGAGGGGGCTGGCAGGAAACACACCGGTGAGAAAGTCATTCTCAGGCAGCAACTCTTaGATCTTCTCCATCAGTCCT +
Preference number: 5 (lower is better)
Translates to: RKSQLRGLAGNTPVRKSFSGSNS*IFSISP
Trigger: AGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGA...GAATGACTTTCTCACCGGTGTGTTTCCTGCCAGCCCCCTCAGTTGGCTTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CAA 90 bp GCTGTGGCAATTTCACCCTTATTCCTTGGAGAGGCCAGCTGCCTGCTGGAAGGAATTAGGGTGAAGGATTaGTCAAACCAGCGATCATGG +
Preference number: 5 (lower is better)
Translates to: AVAISPLFLGEASCLLEGIRVKD*SNQRSW
Trigger: CCATGATCGCTGGTTTGACAAATCCTTCACCCTAAT...TCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGATTAGGGTGAAGGATTaGTCAAACCAGCGATCATGG +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQIRVKD*SNQRSW
Trigger: CCATGATCGCTGGTTTGACAAATCCTTCACCCTAAT...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACACCGGTGAGAAAGTCATTCTTAGTCCCAGCTACTTGGAAGGCTGAAGCAGGACCCCAAATCTCCCGCTaGCATATGTCCAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: TPVRKSFLVPATWKAEAGPQISR*HMSNPS
Trigger: ACTGGGATTGGACATATGCAAGCGGGAGATTTGGGG...TCCTGCTTCAGCCTTCCAAGTAGCTGGGACTAAGAATGACTTTCTCACCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596922.5
ENST00000598259.5
CDS-3UTR CAA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCAAACAGATGCATTaGCTGAACAGGGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPVKQMH*LNRDLA
Trigger: AGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGAC...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
CDS GCA 90 bp TTGTGCTCCTCGTGGAGGCTGGCTTCAGTAGGTCCCATCAACGTTTaGAAGTGGATGAGTGAGTACACAGAAATAACTGAAGCCTCAAGC +
Preference number: 5 (lower is better)
Translates to: LCSSWRLASVGPINV*KWMSEYTEITEASS
Trigger: GCTTGAGGCTTCAGTTATTTCTGTGTACTCACTCATCCACTTGCAAACGTTGATGGGACCTACTGAAGCCAGCCTCCACGAGGAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596701.1
ENST00000599023.5
CDS-3UTR CAA 90 bp CAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTATTAGGGTGAAGGATTaGTCAAACCAGCGATCATGG +
Preference number: 5 (lower is better)
Translates to: QLTHLYWPGCGVAKPVAPIRVKD*SNQRSW
Trigger: CCATGATCGCTGGTTTGACAAATCCTTCACCCTAAT...AGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGATTAGGGTGAAGGATTaGTCAAACCAGCGATCATGG +
Preference number: 5 (lower is better)
Translates to: THLYWPGCGVAKPVAPVLIRVKD*SNQRSW
Trigger: CCATGATCGCTGGTTTGACAAATCCTTCACCCTAAT...CAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCAGTTTGTGCTTGATTTTTaGCTGGAGATGTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LYWPGCGVAKPVAPVLCQFVLDF*LEMWKV
Trigger: CACCTTCCACATCTCCAGCAAAAAATCAAGCACAAA...CTGACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CCCAGCTCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCTTTGTGCTTGATTTTTaGCTGGAGATGTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: PSSHIFIGLDVGLPNQLPFVLDF*LEMWKV
Trigger: CACCTTCCACATCTCCAGCAAAAAATCAAGCACAAA...GGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGAGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp CACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTTTTGTGCTTGATTTTTaGCTGGAGATGTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: HIFIGLDVGLPNQLPLSCFVLDF*LEMWKV
Trigger: CACCTTCCACATCTCCAGCAAAAAATCAAGCACAAA...ACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS-3UTR CAA 90 bp ATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTGTGTCTTTGTGCTTGATTTTTaGCTGGAGATGTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: IFIGLDVGLPNQLPLSCVFVLDF*LEMWKV
Trigger: CACCTTCCACATCTCCAGCAAAAAATCAAGCACAAA...GACACAGGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598293.6
CDS-3UTR CAA 90 bp TCACACATCTTTATTGGCCTGGATGTGGGGTTGCCAAACCAGTTGCCCCTGTCCTTTGTGCTTGATTTTTaGCTGGAGATGTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SHIFIGLDVGLPNQLPLSFVLDF*LEMWKV
Trigger: CACCTTCCACATCTCCAGCAAAAAATCAAGCACAAA...GGACAGGGGCAACTGGTTTGGCAACCCCACATCCAGGCCAATAAAGATGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000597099.1
ENST00000598293.6
CDS TCA 90 bp AATGTAAGTCTCAGAGGTTACTTTTCTTTAGCAGGTACACCACAATaGCAGAGGAACTTACTGGGTGAAGGGAGAGTGATTGGGGGTTAC +
Preference number: 5 (lower is better)
Translates to: NVSLRGYFSLAGTPQ*QRNLLGEGRVIGGY
Trigger: GTAACCCCCAATCACTCTCCCTTCACCCAGTAAGTTCCTCTGTCATTGTGGTGTACCTGCTAAAGAAAAGTAACCTCTGAGACTTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600944.5
CDS CCA 72 bp CCGTCCGAGGTCAGCGAGGGTCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCACGCTGGAGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: PSEVSEGRKPTA*CASAMSRWSPA
Trigger: AGCAGGGCTCCAGCGTGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCGACCCTCGCTGACCTCGGACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295404.9
ENST00000594587.5
ENST00000595969.5
ENST00000598259.5
ENST00000602019.5
CDS CCA 72 bp CCGTCCGAGGTCAGCGAGGGTCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCACGCTGGAGCCCACGT +
Preference number: 6 (lower is better)
Translates to: PSEVSEGRKPTA*CASAMSRWSPR
Trigger: ACGTGGGCTCCAGCGTGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCGACCCTCGCTGACCTCGGACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323446.9
ENST00000596922.5
CDS GCA 72 bp GGAGTCCACCACCGGGTCGACGGGCCTTTGGAGTCCTaGCCACCCCGAGATCACCGTCACCCAGAAACCCCG +
Preference number: 6 (lower is better)
Translates to: GVHHRVDGPLES*PPRDHRHPETP
Trigger: CGGGGTTTCTGGGTGACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCGGTGGTGGACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000596922.5
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
CDS CCA 72 bp CTAACCCACTGGGGCCCTCTCACCGGGGGTATCTCCTaGCGGTTCAGGCGGTGGCGGTACAGGAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: LTHWGPLTGGIS*RFRRWRYRRRA
Trigger: TGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGGTGAGAGGGCCCCAGTGGGTTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS CCA 72 bp CCGTCCGAGGTCAGCGAGGGTCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCACGCTGGAGCCGCTTT +
Preference number: 6 (lower is better)
Translates to: PSEVSEGRKPTA*CASAMSRWSRF
Trigger: AAAGCGGCTCCAGCGTGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCGACCCTCGCTGACCTCGGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392518.8
CDS CCA 72 bp CCGTCCGAGGTCAGCGAGGGTCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCACGCTGGAGCCCTGAA +
Preference number: 6 (lower is better)
Translates to: PSEVSEGRKPTA*CASAMSRWSPE
Trigger: TTCAGGGCTCCAGCGTGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCGACCCTCGCTGACCTCGGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000405931.6
ENST00000594038.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
CDS CCA 72 bp CCGTCCGAGGTCAGCGAGGGTCGGAAGCCCACGGCCTaGTGCGCTTCAGCCATGTCACGCTGGAGCCCTGTT +
Preference number: 6 (lower is better)
Translates to: PSEVSEGRKPTA*CASAMSRWSPV
Trigger: AACAGGGCTCCAGCGTGACATGGCTGAAGCGCACCAGGCCGTGGGCTTCCGACCCTCGCTGACCTCGGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595568.5
CDS CCA 72 bp CCTCTCACCGGGGGTATCTCCTGGCGGTTCAGGCGGTaGCGGTACAGGAGGAGGGCATGGACGGCATTCCCA +
Preference number: 6 (lower is better)
Translates to: PLTGGISWRFRR*RYRRRAWTAFP
Trigger: TGGGAATGCCGTCCATGCCCTCCTCCTGTACCGCCACCGCCTGAACCGCCAGGAGATACCCCCGGTGAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS CCA 72 bp GGCTCAGGTGGACTGAGACCCTGCGGGGGCTGTGGATaGGGAACCCAACTGACCCGGAAGTGGGCCAGTTGC +
Preference number: 6 (lower is better)
Translates to: GSGGLRPCGGCG*GTQLTRKWASC
Trigger: GCAACTGGCCCACTTCCGGGTCAGTTGGGTTCCCCATCCACAGCCCCCGCAGGGTCTCAGTCCACCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295404.9
ENST00000596701.1
ENST00000599023.5
CDS CCA 72 bp CAGTGCAAGGAGTCCACCACCGGGTCGACGGGCCTTTaGAGTCCTGCCCACCCCGAGATCACCGTCACCCAG +
Preference number: 6 (lower is better)
Translates to: QCKESTTGSTGL*SPAHPEITVTQ
Trigger: CTGGGTGACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCGGTGGTGGACTCCTTGCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000596922.5
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
ENST00000602019.5
CDS CCA 72 bp GGACCGCGGTCCAGTCGAAGTCCTCGTCGGAGAGGATaGGCCGGACCGACTCCAGGTACAGCCAGGTCTTGG +
Preference number: 6 (lower is better)
Translates to: GPRSSRSPRRRG*AGPTPGTARSW
Trigger: CCAAGACCTGGCTGTACCTGGAGTCGGTCCGGCCCATCCTCTCCGACGAGGACTTCGACTGGACCGCGGTCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599023.5
CDS CAA 72 bp CCAGTGCAAGGAGTCCACCACCGGGTCGACGGGCCTTaGGAGTCCTGCCCACCCCGAGATCACCGTCACCCA +
Preference number: 6 (lower is better)
Translates to: PVQGVHHRVDGP*ESCPPRDHRHP
Trigger: TGGGTGACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCGGTGGTGGACTCCTTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000596922.5
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
ENST00000602019.5
CDS CAA 90 bp TGTCCAATCCCAGTGCAAGGAGTCCACCACCGGGTCGACGGGCCTTaGGAGTCCTGCCCACCCCGAGATCACCGTCACCCAGAAACCCCG +
Preference number: 6 (lower is better)
Translates to: CPIPVQGVHHRVDGP*ESCPPRDHRHPETP
Trigger: CGGGGTTTCTGGGTGACGGTGATCTCGGGGTGGGCAGGACTCCAAAGGCCCGTCGACCCGGTGGTGGACTCCTTGCACTGGGATTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000596922.5
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
CDS TCA 72 bp GGCCAGAGAGGTAGATCTCCTGCAGCACAGGGGCACTaGGTTCCACTTCAGCCCCGTCCGAGGTCAGCGAGG +
Preference number: 6 (lower is better)
Translates to: GQRGRSPAAQGH*VPLQPRPRSAR
Trigger: CCTCGCTGACCTCGGACGGGGCTGAAGTGGAACTCAGTGCCCCTGTGCTGCAGGAGATCTACCTCTCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000295404.9
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000594038.5
ENST00000594587.5
ENST00000595568.5
ENST00000595969.5
ENST00000596922.5
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
ENST00000602019.5
CDS GCA 72 bp CTGTCCCGCCTGGAACAGGGAGGCCACATCCAGCAGTaGGTCCTCAATGTGCTGCCCCAGCCTGTGGGAATC +
Preference number: 6 (lower is better)
Translates to: LSRLEQGGHIQQ*VLNVLPQPVGI
Trigger: GATTCCCACAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000597099.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS CCA 72 bp AAAGGCCACAGGACCACACCTCCATCCCTAACCCACTaGGGCCCTCTCACCGGGGGTATCTCCTGGCGGTTC +
Preference number: 6 (lower is better)
Translates to: KGHRTTPPSLTH*GPLTGGISWRF
Trigger: GAACCGCCAGGAGATACCCCCGGTGAGAGGGCCCCAGTGGGTTAGGGATGGAGGTGTGGTCCTGTGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS TCA 72 bp TGTCACGCTGGAGCCCACGTTGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAAACCCGAGTCCACCCC +
Preference number: 6 (lower is better)
Translates to: CHAGAHVESRVR*SDPGVQTRVHP
Trigger: GGGGTGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGGACCCTTGATTCAACGTGGGCTCCAGCGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323446.9
ENST00000596922.5
CDS TCA 72 bp GCTGAGTTGCGGGGTCACGTTGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAAACCCGAGTCCACCCC +
Preference number: 6 (lower is better)
Translates to: AELRGHVESRVR*SDPGVQTRVHP
Trigger: GGGGTGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGGACCCTTGATTCAACGTGACCCCGCAACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598259.5
ENST00000602019.5
CDS GCA 72 bp GAGGCCCCAGTCTGGCGGGAGAGAAATCCACACCTGTaGCTGGAGTTCTCCTTCCCTGACCCTCTGAACCGG +
Preference number: 6 (lower is better)
Translates to: EAPVWRERNPHL*LEFSFPDPLNR
Trigger: CCGGTTCAGAGGGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS CCA 72 bp GAGGCCAGCTGCCTGCTGGAAGGAGTCAGAAGTCGGTaGATGTCATTGAGGCCTTGGAGGCCCCAGTCTGGC +
Preference number: 6 (lower is better)
Translates to: EASCLLEGVRSR*MSLRPWRPQSG
Trigger: GCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS CCA 72 bp GCGTCCTCAATGTGCTGCCCCAGCCTGTGGGAATCCTaGAAGGAGAACAGGTCAGAGCCAGGGGAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: ASSMCCPSLWES*KENRSEPGEAG
Trigger: CCCAGCTTCCCCTGGCTCTGACCTGTTCTCCTTCCAGGATTCCCACAGGCTGGGGCAGCACATTGAGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598647.1
CDS CAA 90 bp GAGGCCAGCTGCCTGCTGGAAGGAGTCAGAAGTCGGTGGATGTCATaGAGGCCTTGGAGGCCCCAGTCTGGCGGGAGAGAAATCCACACC +
Preference number: 6 (lower is better)
Translates to: EASCLLEGVRSRWMS*RPWRPQSGGREIHT
Trigger: GGTGTGGATTTCTCTCCCGCCAGACTGGGGCCTCCAAGGCCTCAATGACATCCACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS GCA 72 bp ATCAGCAAAGTCTGCAGGAAACCGTGGGCTGTGAGCTaGCTTCCAGGACCCACGTGGCCCAAAGGCCACAGG +
Preference number: 6 (lower is better)
Translates to: ISKVCRKPWAVS*LPGPTWPKGHR
Trigger: CCTGTGGCCTTTGGGCCACGTGGGTCCTGGAAGGCAGCTCACAGCCCACGGTTTCCTGCAGACTTTGCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS GCA 72 bp GCCCCAAATCTCCCGCTTGCATATGTCCAATCCCAGTaGAAGGAGTCCACCACCGGGTCGACGGGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: APNLPLAYVQSQ*KESTTGSTGLW
Trigger: CCAAAGGCCCGTCGACCCGGTGGTGGACTCCTTGCACTGGGATTGGACATATGCAAGCGGGAGATTTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000596922.5
ENST00000598259.5
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
ENST00000602019.5
CDS GCA 72 bp TTTCCCTGTGCCCCAACCTGGGTCAGGAAGGGCGACTaGAGGTGGAGGAATCGGGACACGATGTACAGCGCA +
Preference number: 6 (lower is better)
Translates to: FPCAPTWVRKGD*RWRNRDTMYSA
Trigger: TGCGCTGTACATCGTGTCCCGATTCCTCCACCTGCAGTCGCCCTTCCTGACCCAGGTTGGGGCACAGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596701.1
CDS CCA 72 bp GACCCTCTGAACCGGCGCTTAAAATGCTGTCCCGCCTaGAACAGGGAGGCCACATCCAGCAGTGCGTCCTCA +
Preference number: 6 (lower is better)
Translates to: DPLNRRLKCCPA*NREATSSSASS
Trigger: TGAGGACGCACTGCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000597099.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS TCA 72 bp GTCAATTCGGGACCTCACGTTGAATCAAGGGTCCGCTaGTCGGATCCTGGGGTCCAAACCCGAGTCCACCCC +
Preference number: 6 (lower is better)
Translates to: VNSGPHVESRVR*SDPGVQTRVHP
Trigger: GGGGTGGACTCGGGTTTGGACCCCAGGATCCGATCAGCGGACCCTTGATTCAACGTGAGGTCCCGAATTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392518.8
ENST00000405931.6
ENST00000598293.6
ENST00000598396.5
ENST00000598714.5
ENST00000599023.5
ENST00000600944.5
CDS TCA 72 bp TGGCTGGTGGACAGCTGCCACTGCTCCGAATGGACCTaGGGACAGGAGCCCATCACATGTGCAGGACAGAGA +
Preference number: 6 (lower is better)
Translates to: WLVDSCHCSEWT*GQEPITCAGQR
Trigger: TCTCTGTCCTGCACATGTGATGGGCTCCTGTCCTCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598647.1
ENST00000599937.5
CDS GCA 72 bp TTCTCCTTCCCTGACCCTCTGAACCGGCGCTTAAAATaGTGTCCCGCCTGGAACAGGGAGGCCACATCCAGC +
Preference number: 6 (lower is better)
Translates to: FSFPDPLNRRLK*CPAWNREATSS
Trigger: GCTGGATGTGGCCTCCCTGTTCCAGGCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000597099.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS GCA 72 bp AGGACAGGAGCCCATCACATGTGCAGGACAGAGATCTaGAGTTCCGGCCCTTGGCTCCACTTCACTCCCTGC +
Preference number: 6 (lower is better)
Translates to: RTGAHHMCRTEI*SSGPWLHFTPC
Trigger: GCAGGGAGTGAAGTGGAGCCAAGGGCCGGAACTGCAGATCTCTGTCCTGCACATGTGATGGGCTCCTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598647.1
ENST00000599937.5
CDS GCA 72 bp AACAGGGAGGCCACATCCAGCAGTGCGTCCTCAATGTaGTGCCCCAGCCTGTGGGAATCCTGGAAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: NREATSSSASSM*CPSLWESWKEN
Trigger: GTTCTCCTTCCAGGATTCCCACAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598647.1
CDS CCA 72 bp CAGGAAGTCGACTTAGGGCTGGGCCTGCGGCACATCTaGCCTCAACTGAGTTTGCCACATCCCTGCAAGGTG +
Preference number: 6 (lower is better)
Translates to: QEVDLGLGLRHI*PQLSLPHPCKV
Trigger: CACCTTGCAGGGATGTGGCAAACTCAGTTGAGGCCAGATGTGCCGCAGGCCCAGCCCTAAGTCGACTTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595901.5
ENST00000596701.1
CDS CCA 72 bp GTCAATTCGGGACCTCCGGCCAGATTCTCCACCATTTaGCCGCTCGCATTCTACGCAGCTGTTCGGAACCCG +
Preference number: 6 (lower is better)
Translates to: VNSGPPARFSTI*PLAFYAAVRNP
Trigger: CGGGTTCCGAACAGCTGCGTAGAATGCGAGCGGCCAAATGGTGGAGAATCTGGCCGGAGGTCCCGAATTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594038.5
CDS CAA 72 bp AAGCCTCAAGCGAGGGCTGCACCCACCGTCTTCTCTTaGTCCTCCATGGCCCTGACAAAGTTGCAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: KPQARAAPTVFS*SSMALTKLQAS
Trigger: GGAGGCCTGCAACTTTGTCAGGGCCATGGAGGACAAAGAGAAGACGGTGGGTGCAGCCCTCGCTTGAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596701.1
ENST00000599023.5
CDS CAA 72 bp GGGCTGGGCCTGCGGCACATCTGGCCTCAACTGAGTTaGCCACATCCCTGCAAGGTGGGAATATCAACCCCA +
Preference number: 6 (lower is better)
Translates to: GLGLRHIWPQLS*PHPCKVGISTP
Trigger: TGGGGTTGATATTCCCACCTTGCAGGGATGTGGCAAACTCAGTTGAGGCCAGATGTGCCGCAGGCCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595901.5
ENST00000596701.1
CDS CAA 72 bp CGTCAATTCGGGACCTCCGGCCAGATTCTCCACCATTaGGCCGCTCGCATTCTACGCAGCTGTTCGGAACCC +
Preference number: 6 (lower is better)
Translates to: RQFGTSGQILHH*AARILRSCSEP
Trigger: GGGTTCCGAACAGCTGCGTAGAATGCGAGCGGCCAAATGGTGGAGAATCTGGCCGGAGGTCCCGAATTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594038.5
CDS CAA 90 bp CCCCTGTCCTGTGTCAGCCAGCTGTGGCAATTTCACCCTTATTCCTaGGAGAGGCCAGCTGCCTGCTGGAAGGAGTCAGAAGTCGGTGGA +
Preference number: 6 (lower is better)
Translates to: PLSCVSQLWQFHPYS*ERPAACWKESEVGG
Trigger: TCCACCGACTTCTGACTCCTTCCAGCAGGCAGCTGGCCTCTCCAAGGAATAAGGGTGAAATTGCCACAGCTGGCTGACACAGGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS TCA 72 bp GCGCCCAGCTCCACTCACAGGCCCGAATCCACCGCCTaGGGAAACATAGTCCGGGTAATTGTGGACGTCAAA +
Preference number: 6 (lower is better)
Translates to: APSSTHRPESTA*GNIVRVIVDVK
Trigger: TTTGACGTCCACAATTACCCGGACTATGTTTCCTCAGGCGGTGGATTCGGGCCTGTGAGTGGAGCTGGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598072.1
CDS GCA 72 bp GCAGAGCATAAGGGGCGCATTCCCATCAGCAAAGTCTaGAGGAAACCGTGGGCTGTGAGCTGCCTTCCAGGA +
Preference number: 6 (lower is better)
Translates to: AEHKGRIPISKV*RKPWAVSCLPG
Trigger: TCCTGGAAGGCAGCTCACAGCCCACGGTTTCCTGCAGACTTTGCTGATGGGAATGCGCCCCTTATGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295404.9
ENST00000594431.1
CDS GCA 72 bp GGATGGGGAACCCAACTGACCCGGAAGTGGGCCAGTTaGAAGGCGATCTGGATGAAGCTGTCTGAAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GWGTQLTRKWAS*KAIWMKLSEER
Trigger: CCTCTCTTCAGACAGCTTCATCCAGATCGCCTTGCAACTGGCCCACTTCCGGGTCAGTTGGGTTCCCCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295404.9
ENST00000596701.1
ENST00000599023.5
CDS CCA 72 bp GGTTGGAAGAGAGAATTCAAGATGGCCGACCCACAATaGCAGCGACCACAAGGAACCGTGGAGGGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: GWKREFKMADPQ*QRPQGTVEGQV
Trigger: GACCTGCCCCTCCACGGTTCCTTGTGGTCGCTGCCATTGTGGGTCGGCCATCTTGAATTCTCTCTTCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295404.9
ENST00000596701.1
ENST00000599023.5
CDS TCA 72 bp GAGAAATCCACACCTGTGCCTGGAGTTCTCCTTCCCTaGCCCTCTGAACCGGCGCTTAAAATGCTGTCCCGC +
Preference number: 6 (lower is better)
Translates to: EKSTPVPGVLLP*PSEPALKMLSR
Trigger: GCGGGACAGCATTTTAAGCGCCGGTTCAGAGGGTCAGGGAAGGAGAACTCCAGGCACAGGTGTGGATTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000598072.1
ENST00000598293.6
ENST00000598647.1
ENST00000599937.5
CDS TCA 72 bp TCTTGGGTGCACCCCCAGTGCCCTGTGAGACCACCATaGAAGCAGATATCACACTATGCTGGGCTGTCTCCC +
Preference number: 6 (lower is better)
Translates to: SWVHPQCPVRPP*KQISHYAGLSP
Trigger: GGGAGACAGCCCAGCATAGTGTGATATCTGCTTTCATGGTGGTCTCACAGGGCACTGGGGGTGCACCCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596701.1
CDS GCA 72 bp AACAGGGAGGCCACATCCAGCAGTGCGTCCTCAATGTaGTGCCCCAGCCTGTGGGAATCCGTTTTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: NREATSSSASSM*CPSLWESVFVL
Trigger: AAGCACAAAAACGGATTCCCACAGGCTGGGGCAGCACATTGAGGACGCACTGCTGGATGTGGCCTCCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000597099.1
ENST00000598072.1
ENST00000598293.6
ENST00000599937.5
CDS GCA 72 bp CGGCATTCCCAGCGCGAGCTGCCATCATGTAATAGTTaGTGTTCACCATCAGCGGATTTCGGGAGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: RHSQRELPSCNS*CSPSADFGSAG
Trigger: ACCTGCGCTCCCGAAATCCGCTGATGGTGAACAGCAACTATTACATGATGGCAGCTCGCGCTGGGAATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405931.6
CDS CCA 72 bp CTCGCATTCTACGCAGCTGTTCGGAACCCGGGTTCCTaGGCTCCTCACTCAGCTCATTGTCTCTTAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LAFYAAVRNPGS*APHSAHCLLVS
Trigger: GGAGACTAAGAGACAATGAGCTGAGTGAGGAGCCCAGGAACCCGGGTTCCGAACAGCTGCGTAGAATGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594038.5
CDS TCA 72 bp GAGTCTGTCAGCTGGGCTCAGGAGATCTTACAGACTTaGCCTATCTCTGTCCAGACCTCCAGCCTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: ESVSWAQEILQT*PISVQTSSLLQ
Trigger: CTGGAGGAGGCTGGAGGTCTGGACAGAGATAGGTCAAGTCTGTAAGATCTCCTGAGCCCAGCTGACAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596701.1
ENST00000599023.5
CDS CCA 72 bp GCCAGCCCAAGAATGGTTGGAAGAGAGAATTCAAGATaGCCGACCCACAATGGCAGCGACCACAAGGAACCG +
Preference number: 6 (lower is better)
Translates to: ASPRMVGRENSR*PTHNGSDHKEP
Trigger: CGGTTCCTTGTGGTCGCTGCCATTGTGGGTCGGCCATCTTGAATTCTCTCTTCCAACCATTCTTGGGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295404.9
ENST00000596701.1
ENST00000599023.5
CDS CCA 72 bp CAAACAGATGCATTTGCTGAACAGGGATCTGGCTGGTaGACAGCTGCCACTGCTCCGAATGGACCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: QTDAFAEQGSGW*TAATAPNGPED
Trigger: GTCCTCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598072.1
ENST00000598647.1
ENST00000599937.5
CDS CCA 72 bp CGTCAAACAGATGCATTTGCTGAACAGGGATCTGGCTaGTGGACAGCTGCCACTGCTCCGAATGGACCTGAG +
Preference number: 6 (lower is better)
Translates to: RQTDAFAEQGSG*WTAATAPNGPE
Trigger: CTCAGGTCCATTCGGAGCAGTGGCAGCTGTCCACCAGCCAGATCCCTGTTCAGCAAATGCATCTGTTTGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598072.1
ENST00000598647.1
ENST00000599937.5
CDS CAA 72 bp GGAGTCTGTCAGCTGGGCTCAGGAGATCTTACAGACTaGACCTATCTCTGTCCAGACCTCCAGCCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: GVCQLGSGDLTD*TYLCPDLQPPP
Trigger: TGGAGGAGGCTGGAGGTCTGGACAGAGATAGGTCAAGTCTGTAAGATCTCCTGAGCCCAGCTGACAGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596701.1
ENST00000599023.5
CDS CAA 72 bp GAAGATGCGGACCAGGGCCAGTCAGGCAGCAACTCTTaGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: EDADQGQSGSNS*IFSISPKEGSS
Trigger: GCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGACTGGCCCTGGTCCGCATCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295404.9
ENST00000595568.5
ENST00000595969.5
CDS TCA 72 bp AAGATGCGGACCAGGGCCAGTCAGGCAGCAACTCTTTaGTCTTCTCCATCAGTCCTAAGGAAGGATCCAGCT +
Preference number: 6 (lower is better)
Translates to: KMRTRASQAATL*SSPSVLRKDPA
Trigger: AGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAAAGAGTTGCTGCCTGACTGGCCCTGGTCCGCATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295404.9
ENST00000595568.5
ENST00000595969.5
CDS CCA 72 bp TTGATCTTCTCCATCAGTCCTAAGGAAGGATCCAGCTaGAGGAACCAGGCAAGCTGGATGGCACCAGAAACG +
Preference number: 6 (lower is better)
Translates to: LIFSISPKEGSS*RNQASWMAPET
Trigger: CGTTTCTGGTGCCATCCAGCTTGCCTGGTTCCTCCAGCTGGATCCTTCCTTAGGACTGATGGAGAAGATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595568.5
CDS TCA 72 bp GGACTACATAACCTAGCTCATCCTTCTCTAAGCACCTaGAGGGTCTTGAGGGTCCTGGTTTGTAGACCCGGA +
Preference number: 6 (lower is better)
Translates to: GLHNLAHPSLST*RVLRVLVCRPG
Trigger: TCCGGGTCTACAAACCAGGACCCTCAAGACCCTTCAGGTGCTTAGAGAAGGATGAGCTAGGTTATGTAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392518.8
CDS CAA 72 bp CCCAGCCTGTGGGAATCCGTTTTTGTGCTTGATTTTTaGCTGGAGATGTGGAAGGTGATCATGCCATCCCCC +
Preference number: 6 (lower is better)
Translates to: PSLWESVFVLDF*LEMWKVIMPSP
Trigger: GGGGGATGGCATGATCACCTTCCACATCTCCAGCAAAAAATCAAGCACAAAAACGGATTCCCACAGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323446.9
ENST00000392518.8
ENST00000405931.6
ENST00000595031.1
ENST00000595901.5
ENST00000597099.1
ENST00000598072.1
ENST00000598293.6
ENST00000599937.5
CDS CCA 72 bp AGGCTGGCTTCAGTAGGTCCCATCAACGTTTGCAAGTaGATGAGTGAGTACACAGAAATAACTGAAGCCTCA +
Preference number: 6 (lower is better)
Translates to: RLASVGPINVCK*MSEYTEITEAS
Trigger: TGAGGCTTCAGTTATTTCTGTGTACTCACTCATCCACTTGCAAACGTTGATGGGACCTACTGAAGCCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000596701.1
ENST00000599023.5