RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPSF7 (Homo sapiens)

Ensembl gene IDs: ENSG00000149532

Ensembl transcript IDs: ENST00000340437.8, ENST00000394888.8, ENST00000413184.6, ENST00000413232.5, ENST00000439958.8, ENST00000448745.5, ENST00000449811.5, ENST00000450000.5, ENST00000463244.6, ENST00000474684.1, ENST00000477890.6, ENST00000489728.1, ENST00000494016.1, ENST00000535222.5, ENST00000536145.3, ENST00000536548.5, ENST00000537162.5, ENST00000537641.5, ENST00000539952.5, ENST00000541963.5, ENST00000543545.5, ENST00000544585.5, ENST00000544669.5, ENST00000544990.5, ENST00000545934.5, ENST00000626926.1

Found 798 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTaGTTAGGAGGGGCAAGTCCACTGAGAAGGCTGGGCAGCGCAGAG +
Preference number: 1 (lower is better)
Translates to: ALPGFPAASNLIGLL*LGGASPLRRLGSAE
Trigger: CTCTGCGCTGCCCAGCCTTCTCAGTGGACTTGCCCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR TCA 90 bp TGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCC +
Preference number: 1 (lower is better)
Translates to: WDSDTLTFPSLCLKL*QVLPGGRPHVHFFS
Trigger: GGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
3UTR TCA 90 bp ATGGGCCCGTGGAGGTATTCGTTTCCGAGCCTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCC +
Preference number: 1 (lower is better)
Translates to: MGPWRYSFPSLCLKL*QVLPGGRPHVHFFS
Trigger: GGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAATACCTCCACGGGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
3UTR GCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATaGAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCGCTGCT +
Preference number: 1 (lower is better)
Translates to: HMPRLMLGVRCPVDA*RSSITPWVPQDLAA
Trigger: AGCAGCGAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR GCA 90 bp ACACACTCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACT +
Preference number: 1 (lower is better)
Translates to: THSRFRACASNCDRF*RVAGLTSTFSPLRT
Trigger: AGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
3UTR GCA 90 bp GGAGGTATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACT +
Preference number: 1 (lower is better)
Translates to: GGIRFRACASNCDRF*RVAGLTSTFSPLRT
Trigger: AGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAATACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
3UTR GCA 90 bp TGCCAAGTCTCATCTCACATGCCACGTCTCATGTTAGGTGTCAGATaGCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCG +
Preference number: 1 (lower is better)
Translates to: CQVSSHMPRLMLGVR*PVDACRSSITPWVP
Trigger: CGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTGAGATGAGACTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR GCA 90 bp CTCTCCTCTGACCCAGAAGGGTCTCTAGTGACCCTATGTCTCACATaGCAAGTCTCATCTCACATGCCACGTCTCATGTTAGGTGTCAGA +
Preference number: 1 (lower is better)
Translates to: LSSDPEGSLVTLCLT*QVSSHMPRLMLGVR
Trigger: TCTGACACCTAACATGAGACGTGGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCTGGGTCAGAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 90 bp CACCCAGTCACTCTCCTAGATCCTGCATGGAGGATCTATTTTCTTTaGGAAGGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCG +
Preference number: 1 (lower is better)
Translates to: HPVTLLDPAWRIYFL*EGSLPINLTIERLP
Trigger: CGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCTCCATGCAGGATCTAGGAGAGTGACTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR TCA 90 bp GTAGAGAAAATGGCCCCCAGAATGCTGGTCCTTAGAACTCTGAGCTaGGTTCATTCAAGTCGGGCTCTGTTTCTTCTGGCTCCTCATCTG +
Preference number: 1 (lower is better)
Translates to: VEKMAPRMLVLRTLS*VHSSRALFLLAPHL
Trigger: CAGATGAGGAGCCAGAAGAAACAGAGCCCGACTTGAATGAACTCAGCTCAGAGTTCTAAGGACCAGCATTCTGGGGGCCATTTTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR GCA 90 bp GGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTaGATGGAGGATCTATTTTCTTTGGGAAGGAAGTCTTCCCATCAA +
Preference number: 1 (lower is better)
Translates to: GPWAYFGTPSHSPRS*MEDLFSLGRKSSHQ
Trigger: TTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCTCCATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 90 bp CCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATaGAGGATCTATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTC +
Preference number: 1 (lower is better)
Translates to: PGHILAHPVTLLDPA*RIYFLWEGSLPINL
Trigger: GAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCTCCATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR TCA 90 bp GATCTATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATTaGACGGCTCCCGGAGAATCAGAAACTCATACGTTTTCTTGGACA +
Preference number: 1 (lower is better)
Translates to: DLFSLGRKSSHQPHH*TAPGESETHTFSWT
Trigger: TGTCCAAGAAAACGTATGAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 90 bp TTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTG +
Preference number: 1 (lower is better)
Translates to: FSPLRTFPGRSSNNL*TEFSEATTTSAYPL
Trigger: CAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
3UTR-3UTR GCA 90 bp GGCCCGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 2 (lower is better)
Translates to: GPWRYSPSWDSDTLTFPSNCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...GCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
3UTR-3UTR GCA 90 bp TCCACACGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCCATCAAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 2 (lower is better)
Translates to: STRADEGTRFSEGVARPSNCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...TGATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
3UTR-3UTR CCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGGGAAAGGGAAGGGGGTaGGGCGGCCTCCGTCCTTTA +
Preference number: 2 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWGKGRG*GGLRPL
Trigger: TAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
3UTR-3UTR GCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGACCGCAGGACCTCGCTaGTGCCTCCTCCTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGTAGPR*CLLLQQ
Trigger: CTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGT...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR TCA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCGAGGGGCAAGTCCACTaGGAAGGCTGGGCAGCGCAG +
Preference number: 2 (lower is better)
Translates to: RRVSSDPMSHMPSLISHAEGQVH*EGWAAQ
Trigger: CTGCGCTGCCCAGCCTTCTCAGTGGACTTGCCCCTC...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR TCA 90 bp AGGTTCTCAGAGGGTGTGGCCCGTCCATCAGCAGAATCACTAGAATCTCGGGAACTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 2 (lower is better)
Translates to: RFSEGVARPSAESLESRELCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...TTCCCGAGATTCTAGTGATTCTGCTGATGGACGGGCCACACCCTCTGAGAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
3UTR-3UTR GCA 90 bp CTGCGGGGGACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGGTGGTAATTGGCTCTaGCAGGCTTCCCAGCAGCAA +
Preference number: 2 (lower is better)
Translates to: LRGTPSVTEGYMRNVLGTGGNWL*QASQQQ
Trigger: TTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACC...TGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTCCCCCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGAGGAAAGGGAAGGGGGTaGGGCGGCCTCCGTCCTTTA +
Preference number: 2 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGGKGRG*GGLRPL
Trigger: TAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
3UTR-3UTR CCA 90 bp TCCACACGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCCATCACTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCGT +
Preference number: 2 (lower is better)
Translates to: STRADEGTRFSEGVARPSLESRE*ARGGIR
Trigger: ACGAATACCTCCACGGGCCCATTCCCGAGATTCTAG...TGATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
3UTR-3UTR GCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGCTCATAGGCCTTCTCTaGTTAGGAGGGGCAAGTCCA +
Preference number: 2 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGLIGLL*LGGASP
Trigger: TGGACTTGCCCCTCCTAAGCAGAGAAGGCCTATGAG...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCGGAAAGGGAAGGGGGTaGGGCGGCCTCCGTCCTTTA +
Preference number: 2 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFGKGRG*GGLRPL
Trigger: TAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
3UTR-3UTR CCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGAAGCACCATTCTCTATaGAGACCAGGGGCCTGGACA +
Preference number: 2 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGKHHSL*RPGAWT
Trigger: TGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTT...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTAGTAGCATCACCCCATaGGTACCGCAGGACCTCGCT +
Preference number: 2 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGSSITP*VPQDLA
Trigger: AGCGAGGTCCTGCGGTACCCATGGGGTGATGCTACT...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp CGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCCATCAGCAGAAACCTGGATCAGCTGCTaGTCTGTGGTCCACATTATC +
Preference number: 2 (lower is better)
Translates to: RADEGTRFSEGVARPSAETWISC*SVVHII
Trigger: GATAATGTGGACCACAGACCAGCAGCTGATCCAGGT...TTCTGCTGATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535222.5
3UTR CAA 90 bp TGCTTAGGAGGGGCAAGTCCACTGAGAAGGCTGGGCAGCGCAGAGTaGAAAGAGTTCAGCCCTCTGGGAGGTCAAAGAAATAAACCGTCA +
Preference number: 2 (lower is better)
Translates to: CLGGASPLRRLGSAE*KEFSPLGGQRNKPS
Trigger: TGACGGTTTATTTCTTTGACCTCCCAGAGGGCTGAACTCTTTCAACTCTGCGCTGCCCAGCCTTCTCAGTGGACTTGCCCCTCCTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR TCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTAGGGTTCTTCATTGCTaGGGTCCCAATGTCCCCATC +
Preference number: 2 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFRVLHC*GPNVPI
Trigger: GATGGGGACATTGGGACCTCAGCAATGAAGAACCCT...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGTATTCCCTGGGTGTCTaGAGGGAGTTAGGGGTTTGG +
Preference number: 2 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKYSLGV*RELGVW
Trigger: CCAAACCCCTAACTCCCTCCAGACACCCAGGGAATA...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
3UTR-3UTR CCA 90 bp GAATGGGCCCGTGGAGGTATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: EWARGGIRFRACASNCDRIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...CCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAATACCTCCACGGGCCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535222.5
3UTR-3UTR TCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGACATCAACCTCACCATTaGACGGCTCCCGGAGAATCA +
Preference number: 2 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGHQPHH*TAPGES
Trigger: TGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATG...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR TCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGAGGGTTCTTCATTGCTaGGGTCCCAATGTCCCCATC +
Preference number: 2 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVRVLHC*GPNVPI
Trigger: GATGGGGACATTGGGACCTCAGCAATGAAGAACCCT...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR TCA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCTGGTCCTTAGAACTCTaGGCTGAGTTCATTCAAGTC +
Preference number: 2 (lower is better)
Translates to: CPVDACRSSITPWVPQDLWSLEL*AEFIQV
Trigger: GACTTGAATGAACTCAGCTCAGAGTTCTAAGGACCA...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp AAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCAGTCTTCAATCCTGTaGGGCAGAGGGTATTCCCTG +
Preference number: 2 (lower is better)
Translates to: KSLGSFPWQTGGVGLGGLQSSIL*GRGYSL
Trigger: CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTG...CAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
3UTR-3UTR CCA 90 bp CTGCGGGGGACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACACCCTCCTCAAAGGGCTaGAAAGGTAAAGGAGTTAAA +
Preference number: 2 (lower is better)
Translates to: LRGTPSVTEGYMRNVLGTPSSKG*KGKGVK
Trigger: TTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGG...TGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTCCCCCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp TCCATCAGCAGAATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTCCCCCATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: SISRITRISGMGPWRYSPIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...GGGGGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537162.5
3UTR-3UTR CCA 90 bp CTTGGACAAAGCACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCAGTCTTCAATCCTGTaGGGCAGAGGGTATTCCCTG +
Preference number: 2 (lower is better)
Translates to: LGQSTILYGDQGPGHVFFQSSIL*GRGYSL
Trigger: CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTG...GAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTTTGTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGAAGCACCATTCTCTATaGAGACCAGGGGCCTGGACA +
Preference number: 2 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKKHHSL*RPGAWT
Trigger: TGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTT...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGACCCTGGGCATATTTTaGCACACCCAGTCACTCTCC +
Preference number: 2 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKTLGIF*HTQSLS
Trigger: GGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGT...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp TATATGAGAAACGTGCTGGGAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCAGTAGCATCACCCCATaGGTACCGCAGGACCTCGCT +
Preference number: 2 (lower is better)
Translates to: YMRNVLGTEDGFSPIQSLSSITP*VPQDLA
Trigger: AGCGAGGTCCTGCGGTACCCATGGGGTGATGCTACT...GAGAGACTGAATTGGACTAAACCCGTCCTCTGTTCCCAGCACGTTTCTCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp GGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCAAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: GIPPLGTRTHSRFRACASSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...TGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
3UTR-3UTR CCA 90 bp GTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: VPQTVTGSAGWPASRPLFSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...AAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
3UTR-3UTR CCA 90 bp GTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCAGCTGCTGGTCTGTaGTCCACATTATCACAGGAC +
Preference number: 2 (lower is better)
Translates to: VAGLTSTFSPLRTFPGRSSAAGL*STLSQD
Trigger: GTCCTGTGATAATGTGGACCACAGACCAGCAGCTGA...ACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535222.5
3UTR-3UTR CCA 90 bp GAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCTTCAGCTGCTGGTCTGTaGTCCACATTATCACAGGAC +
Preference number: 2 (lower is better)
Translates to: EFSEATTTSAYPLDWPFASAAGL*STLSQD
Trigger: GTCCTGTGATAATGTGGACCACAGACCAGCAGCTGA...AGCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
3UTR CAA 90 bp TCACCATTGAACGGCTCCCGGAGAATCAGAAACTCATACGTTTTCTaGGACAAAGCACCATTCTCTATGGAGACCAGGGGCCTGGACATG +
Preference number: 2 (lower is better)
Translates to: SPLNGSRRIRNSYVF*DKAPFSMETRGLDM
Trigger: CATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTTTGTCCAAGAAAACGTATGAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp CTGCGGGGGACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAAGGATCTATTTTCTTTaGGAAGGAAGTCTTCCCATC +
Preference number: 2 (lower is better)
Translates to: LRGTPSVTEGYMRNVLGTRIYFL*EGSLPI
Trigger: GATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCT...TGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTCCCCCGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACCTGAGGGCAGGACCCTaGGCATATTTTGGCACACCC +
Preference number: 2 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNLRAGP*AYFGTP
Trigger: GGGTGTGCCAAAATATGCCCAGGGTCCTGCCCTCAG...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp AGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: RVFRGYHHLSIPFGLAICIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...GCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
3UTR-3UTR TCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTTGGTCCTTAGAACTCTaGGCTGAGTTCATTCAAGTC +
Preference number: 2 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGWSLEL*AEFIQV
Trigger: GACTTGAATGAACTCAGCTCAGAGTTCTAAGGACCA...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR GCA 90 bp TATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGTGGGATTGGGAGGACTaGCAAGCAGTCTTCAATCCT +
Preference number: 2 (lower is better)
Translates to: YFLWEGSLPINLTIERLPWDWED*QAVFNP
Trigger: AGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA...CGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGTTTCCCCATTCCTCCTaGTTACTTCACAAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVFPHSS*LLHKGS
Trigger: AGAACCCTTGTGAAGTAACCAGGAGGAATGGGGAAA...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp ACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: TEFSEATTTSAYPLDWPFIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...AAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
3UTR-3UTR CCA 90 bp CGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: RVAGLTSTFSPLRTFPGRSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...CCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
3UTR-3UTR TCA 90 bp CGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGGATCAACAGTCAAAAGGTaGAAAGACACCAAATTTGTG +
Preference number: 2 (lower is better)
Translates to: RRTSLLPPPSAATTLQFGSTVKR*KDTKFV
Trigger: CACAAATTTGGTGTCTTTTCACCTTTTGACTGTTGA...TCCAAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR TCA 90 bp GAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGTTTAGTCCAATTCAGTATCTCCAGGCAGAGTaGGAGGAGCTATTAAGTCAA +
Preference number: 2 (lower is better)
Translates to: EGYMRNVLGTEDGFSPIQYLQAE*EELLSQ
Trigger: TTGACTTAATAGCTCCTCTCACTCTGCCTGGAGATA...CTGAATTGGACTAAACCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR GCA 90 bp ATGGAAAAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTATGGGATTGGGAGGACTaGCAAGCAGTCTTCAATCCT +
Preference number: 2 (lower is better)
Translates to: MEKPQGKGTTKSWLLQEVWDWED*QAVFNP
Trigger: AGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA...TACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACTATTCCCTGGGTGTCTaGAGGGAGTTAGGGGTTTGG +
Preference number: 2 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNYSLGV*RELGVW
Trigger: CCAAACCCCTAACTCCCTCCAGACACCCAGGGAATA...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp ATGGAAAAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTATTAGGTTCTTTCCCCTaGCAAACAGGAGGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: MEKPQGKGTTKSWLLQEVLGSFP*QTGGVG
Trigger: TCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAA...TACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp CAAAGAAGTGGTATGTTAGCAAGGGGTTTGGACCCTCTTGGCCCCATTAAATCTTTAGGTTCTTTCCCCTaGCAAACAGGAGGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: QRSGMLARGLDPLGPIKSLGSFP*QTGGVG
Trigger: TCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAA...AGATTTAATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACATACCACTTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp GTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAGTCCCTCCTCAAAGGGCTaGAAAGGTAAAGGAGTTAAA +
Preference number: 2 (lower is better)
Translates to: VPMSPSPNGQYLPLKQGSPSSKG*KGKGVK
Trigger: TTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGG...ACTTCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTAAGAGTTCAGCCCTCTaGGAGGTCAAAGAAATAAAC +
Preference number: 2 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGKSSAL*EVKEIN
Trigger: GTTTATTTCTTTGACCTCCCAGAGGGCTGAACTCTT...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTTTTCCCCATTCCTCCTaGTTACTTCACAAGGGTTCT +
Preference number: 2 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSFPHSS*LLHKGS
Trigger: AGAACCCTTGTGAAGTAACCAGGAGGAATGGGGAAA...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CAA 90 bp AAAGGTAAAGGAGTTAAACAAAGAAGTGGTATGTTAGCAAGGGGTTaGGACCCTCTTGGCCCCATTAAATCTAGTGCTGAGGGCAGGACC +
Preference number: 2 (lower is better)
Translates to: KGKGVKQRSGMLARG*DPLGPIKSSAEGRT
Trigger: GGTCCTGCCCTCAGCACTAGATTTAATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACATACCACTTCTTTGTTTAACTCCTTTACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR TCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTAAGACACCAAATTTGTaGCTTTACCTGCCTACTAGT +
Preference number: 2 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGKTPNL*LYLPTS
Trigger: ACTAGTAGGCAGGTAAAGTCACAAATTTGGTGTCTT...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR GCA 90 bp AGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 2 (lower is better)
Translates to: RVFRGYHHLSIPFGLAICICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...GCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
3UTR CAA 90 bp GGATCTATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATaGAACGGCTCCCGGAGAATCAGAAACTCATACGTTTTCTTGGAC +
Preference number: 2 (lower is better)
Translates to: GSIFFGKEVFPSTSP*NGSRRIRNSYVFLD
Trigger: GTCCAAGAAAACGTATGAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CAA 90 bp GGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTaGGATGTTATGGAAAAGCAATTCCATTTGCCTGTAGAGAAAATG +
Preference number: 2 (lower is better)
Translates to: GPRCCLLLQQQPHYN*DVMEKQFHLPVEKM
Trigger: CATTTTCTCTACAGGCAAATGGAATTGCTTTTCCATAACATCCAAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR GCA 90 bp CACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTTGGTCCATTAATCATTaGTTTCTTCGGCACCAGTAC +
Preference number: 2 (lower is better)
Translates to: HIIDSYRANNLDQLLVCGWSINH*FLRHQY
Trigger: GTACTGGTGCCGAAGAAAGCAATGATTAATGGACCA...ACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
3UTR-3UTR CCA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGAGGATCTATTTTCTTTaGGAAGGAAGTCTTCCCATC +
Preference number: 2 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKRIYFL*EGSLPI
Trigger: GATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCT...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CAA 90 bp ACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCT +
Preference number: 2 (lower is better)
Translates to: TFSPLRTFPGRSSNN*WTEFSEATTTSAYP
Trigger: AGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
3UTR-3UTR TCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTCATCAACCTCACCATTaGACGGCTCCCGGAGAATCA +
Preference number: 2 (lower is better)
Translates to: LHFKRHPELLSISTSLNTHQPHH*TAPGES
Trigger: TGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATG...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR GCA 90 bp AGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTTTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 2 (lower is better)
Translates to: RTFPGRSSNNLWTEFSEAFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000537162.5
3UTR-3UTR CCA 90 bp ATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGAGGATCTATTTTCTTTaGGAAGGAAGTCTTCCCATC +
Preference number: 2 (lower is better)
Translates to: INRQYVRGKAGTEVAFHKRIYFL*EGSLPI
Trigger: GATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCT...CTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR GCA 72 bp GGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTaGTTAGGAGGGGCAAGTCCACTGAGAAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: GFPAASNLIGLL*LGGASPLRRLG
Trigger: GCCCAGCCTTCTCAGTGGACTTGCCCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR GCA 72 bp CGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCA +
Preference number: 3 (lower is better)
Translates to: RFRACASNCDRF*RVAGLTSTFSP
Trigger: TGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
3UTR GCA 72 bp AAAGCTCCAACCTGTAGCCTCTGTCCCAAGGGAATGTaGCTCTCCAATCCTGCGGGGGACTCCCTCAGTGAC +
Preference number: 3 (lower is better)
Translates to: KAPTCSLCPKGM*LSNPAGDSLSD
Trigger: GTCACTGAGGGAGTCCCCCGCAGGATTGGAGAGGCACATTCCCTTGGGACAGAGGCTACAGGTTGGAGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 72 bp TCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTaGAGGGAGTTAGGGGTTTGGAGGAAAGGGAAGGGG +
Preference number: 3 (lower is better)
Translates to: SILWGRGYSLGV*RELGVWRKGKG
Trigger: CCCCTTCCCTTTCCTCCAAACCCCTAACTCCCTCCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
3UTR CCA 72 bp GCCCGTCCATCAGCAGAATCACTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCGTTTCCGAGCCTGTGCC +
Preference number: 3 (lower is better)
Translates to: ARPSAESLESRE*ARGGIRFRACA
Trigger: GGCACAGGCTCGGAAACGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGATGGACGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
3UTR-3UTR CAA 90 bp GGACACACTCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 3 (lower is better)
Translates to: GHTHVSEPVPQTVTGSAGTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...CCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537162.5
3UTR TCA 72 bp TGCCTCTCCAATCCTGCGGGGGACTCCCTCAGTGACTaGGGGCTATATGAGAAACGTGCTGGGAACAGAGGA +
Preference number: 3 (lower is better)
Translates to: CLSNPAGDSLSD*GLYEKRAGNRG
Trigger: TCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTCCCCCGCAGGATTGGAGAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp CGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGGACCATCAACCTCACCATaGAACGGCTCCCGGAGAATC +
Preference number: 3 (lower is better)
Translates to: RRTSLLPPPSAATTLQFGPSTSP*NGSRRI
Trigger: GATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGG...TCCAAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp TGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 3 (lower is better)
Translates to: CRVAGLTSTFSPLRTFPGTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...ACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
3UTR GCA 72 bp CGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATaGAGAAGTAGCATCACCCCATGGGTACCGCAGGAC +
Preference number: 3 (lower is better)
Translates to: RLMLGVRCPVDA*RSSITPWVPQD
Trigger: GTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 72 bp CCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTaGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCA +
Preference number: 3 (lower is better)
Translates to: PPNHTKSLGSFP*QTGGVGLGGLP
Trigger: TGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
3UTR-3UTR CAA 90 bp GTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAGTCCATCAACCTCACCATaGAACGGCTCCCGGAGAATC +
Preference number: 3 (lower is better)
Translates to: VPMSPSPNGQYLPLKQGSPSTSP*NGSRRI
Trigger: GATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGG...ACTTCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTCATATCCTGCCCAACTaGCTTCTTTCCCCATTCCTC +
Preference number: 3 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFHILPN*LLSPFL
Trigger: GAGGAATGGGGAAAGAAGCAAGTTGGGCAGGATATG...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCGGGGTTTGGACCCTCTaGGCCCCATTAAATCTAGTG +
Preference number: 3 (lower is better)
Translates to: RRVSSDPMSHMPSLISHAGVWTL*APLNLV
Trigger: CACTAGATTTAATGGGGCCAAGAGGGTCCAAACCCC...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCGAAAAGCAATTCCATTaGCCTGTAGAGAAAATGGCC +
Preference number: 3 (lower is better)
Translates to: CPVDACRSSITPWVPQDLEKQFH*PVEKMA
Trigger: GGCCATTTTCTCTACAGGCAAATGGAATTGCTTTTC...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp GACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTCTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 3 (lower is better)
Translates to: DRFCRVAGLTSTFSPLRTLWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...AGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
3UTR TCA 72 bp ATGGCCCCCAGAATGCTGGTCCTTAGAACTCTGAGCTaGGTTCATTCAAGTCGGGCTCTGTTTCTTCTGGCT +
Preference number: 3 (lower is better)
Translates to: MAPRMLVLRTLS*VHSSRALFLLA
Trigger: AGCCAGAAGAAACAGAGCCCGACTTGAATGAACTCAGCTCAGAGTTCTAAGGACCAGCATTCTGGGGGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 72 bp ACGGCTCCCGGAGAATCAGAAACTCATACGTTTTCTTaGACAAAGCACCATTCTCTATGGAGACCAGGGGCC +
Preference number: 3 (lower is better)
Translates to: TAPGESETHTFS*TKHHSLWRPGA
Trigger: GGCCCCTGGTCTCCATAGAGAATGGTGCTTTGTCCAAGAAAACGTATGAGTTTCTGATTCTCCGGGAGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp GACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: DRFCRVAGLTSTFSPLRTRSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...AGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
3UTR GCA 72 bp TCATCTCACATGCCACGTCTCATGTTAGGTGTCAGATaGCCTGTAGATGCATGCAGAAGTAGCATCACCCCA +
Preference number: 3 (lower is better)
Translates to: SSHMPRLMLGVR*PVDACRSSITP
Trigger: TGGGGTGATGCTACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR TCA 72 bp AGAAAATGGCCCCCAGAATGCTGGTCCTTAGAACTCTaGGCTGAGTTCATTCAAGTCGGGCTCTGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: RKWPPECWSLEL*AEFIQVGLCFF
Trigger: GAAGAAACAGAGCCCGACTTGAATGAACTCAGCTCAGAGTTCTAAGGACCAGCATTCTGGGGGCCATTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGAACTCATACGTTTTCTaGGACAAAGCACCATTCTCT +
Preference number: 3 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVNSYVF*DKAPFS
Trigger: AGAGAATGGTGCTTTGTCCAAGAAAACGTATGAGTT...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR TCA 72 bp TCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATTaGACGGCTCCCGGAGAATCAGAAACTCATACGTTT +
Preference number: 3 (lower is better)
Translates to: SLGRKSSHQPHH*TAPGESETHTF
Trigger: AAACGTATGAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 72 bp ATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATaGAGGATCTATTTTCTTTGGGAAGGAAGTCTTCCC +
Preference number: 3 (lower is better)
Translates to: ILAHPVTLLDPA*RIYFLWEGSLP
Trigger: GGGAAGACTTCCTTCCCAAAGAAAATAGATCCTCCATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR-3UTR CAA 90 bp ATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGATGTTAGCAAGGGGTTaGGACCCTCTTGGCCCCATT +
Preference number: 3 (lower is better)
Translates to: INRQYVRGKAGTEVAFHKMLARG*DPLGPI
Trigger: AATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACAT...CTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 72 bp TTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCTACCACCACCTCAGCA +
Preference number: 3 (lower is better)
Translates to: LRTFPGRSSNNL*TEFSEATTTSA
Trigger: TGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
3UTR-3UTR CAA 90 bp CAAAGAAGTGGTATGTTAGCAAGGGGTTTGGACCCTCTTGGCCCCATTAAATCTAACTCATACGTTTTCTaGGACAAAGCACCATTCTCT +
Preference number: 3 (lower is better)
Translates to: QRSGMLARGLDPLGPIKSNSYVF*DKAPFS
Trigger: AGAGAATGGTGCTTTGTCCAAGAAAACGTATGAGTT...AGATTTAATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACATACCACTTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR TCA 72 bp AGTCAACAGTCAAAAGGTGAAAAGACACCAAATTTGTaGCTTTACCTGCCTACTAGTGCCAGGTTATCCCAC +
Preference number: 3 (lower is better)
Translates to: SQQSKGEKTPNL*LYLPTSARLSH
Trigger: GTGGGATAACCTGGCACTAGTAGGCAGGTAAAGTCACAAATTTGGTGTCTTTTCACCTTTTGACTGTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR CCA 72 bp GGTAATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTaGAAAGGTAAAGGAGTTAAACAAAGAAGTGGTATG +
Preference number: 3 (lower is better)
Translates to: GNFCSHGPSSKG*KGKGVKQRSGM
Trigger: CATACCACTTCTTTGTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAATTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
3UTR TCA 72 bp AGAGTGAGAGGAGCTATTAAGTCAACAGTCAAAAGGTaGAAAGACACCAAATTTGTGACTTTACCTGCCTAC +
Preference number: 3 (lower is better)
Translates to: RVRGAIKSTVKR*KDTKFVTLPAY
Trigger: GTAGGCAGGTAAAGTCACAAATTTGGTGTCTTTTCACCTTTTGACTGTTGACTTAATAGCTCCTCTCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCCGGGACCGGCTAGGTaGCCTTTCCCGGGAGCGATG +
Preference number: 4 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMPGPAR*PFPGAM
Trigger: CATCGCTCCCGGGAAAGGTCACCTAGCCGGTCCCGG...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAACCCTTCCCGCCTCAGTaGCGGCCCGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQPFPPQ*RPGPLF
Trigger: GAAGAGGGGTCCGGGCCGGCACTGAGGCGGGAAGGG...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340437.8
CDS-3UTR TCA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGAGGGACCCCAAAGCTTaGGGAGAGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMRDPKA*GERWWG
Trigger: CCCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCT...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAACCGGGACCGGCTAGGTaGCCTTTCCCGGGAGCGATG +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQPGPAR*PFPGAM
Trigger: CATCGCTCCCGGGAAAGGTCACCTAGCCGGTCCCGG...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATGATCCCGGTGCCTCCTaGTGCTCTCCCGGGACCGGC +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHDPGAS*CSPGTG
Trigger: GCCGGTCCCGGGAGAGCAGCAGGAGGCACCGGGATC...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RFRACASNCDRFCRVAGLVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...GAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGGGAAAGGGAAGGGGGTaGGGCGGCCTCCGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GKGRGWGGLRPLVLIKVRGKGRG*GGLRPL
Trigger: TAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC...CCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp CCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTCTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PVPQTVTGSAGWPASRPLLCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...AAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR TCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATCCGGGACCGGCTAGGTaGCCTTTCCCGGGAGCGATG +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHPGPAR*PFPGAM
Trigger: CATCGCTCCCGGGAAAGGTCACCTAGCCGGTCCCGG...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp CACTCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: HSRFRACASNCDRFCRVANCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...GGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTGATGCCACGGGAATATaGCGGCGGCGGCGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPDATGI*RRRRRV
Trigger: GACTCGCCGCCGCCGCCGCCATATTCCCGTGGCATC...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGACCGCAGGACCTCGCTaGTGCCTCCTCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: WEDCQAVFNPVGQRVFPGTAGPR*CLLLQQ
Trigger: CTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGT...CCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SRFRACASNCDRFCRVAGLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...GCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp AGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RKGKGVGRPPSFSPDQGEVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...CTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RFRACASNCDRFCRVAGLQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...GAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp CGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGGAGATGCCACGGGAATATaGCGGCGGCGGCGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: RRTSLLPPPSAATTLQFGDATGI*RRRRRV
Trigger: GACTCGCCGCCGCCGCCGCCATATTCCCGTGGCATC...TCCAAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TTTGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGAAGGCTGGATTGAGGTaGAGGGCAGGTGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: FGGKGRGWGGLRPLVLIKKAGLR*RAGGMA
Trigger: GGCCATCCCACCTGCCCTTCACCTCAATCCAGCCTT...CTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTCGGCCCGGCGCGCTCTaGCTCCTCCCTCAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGRPGAL*LLPQKA
Trigger: GGCCTTTTGAGGGAGGAGGCAGAGCGCGCCGGGCCG...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340437.8
CDS-3UTR GCA 90 bp TCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: SEPVPQTVTGSAGWPASREEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...ACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR GCA 90 bp GGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGTCCACCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GKGRGWGGLRPLVLIKVRSTRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGTGGA...CCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: CPVDACRSSITPWVPQDLNCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCCATCAGCAGAAAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: RADEGTRFSEGVARPSAENCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...TTCTGCTGATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp ATGGGCCCGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: MGPWRYSPSWDSDTLTFPLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...CGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp AGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGACCTGGATCAGCTGCTaGTCTGTGGTCCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: RKGKGVGRPPSFSPDQGETWISC*SVVHQE
Trigger: CTCCTGGTGGACCACAGACCAGCAGCTGATCCAGGT...CTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TTTGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGTGGGGGTGGAATTGGTaGTGGGGGCAGACCCATCAG +
Preference number: 4 (lower is better)
Translates to: FGGKGRGWGGLRPLVLIKWGWNW*WGQTHQ
Trigger: CTGATGGGTCTGCCCCCACCACCAATTCCACCCCCA...CTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGTGGAAGAGCTCCCACTaGCACCCACACTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: GKGRGWGGLRPLVLIKVRWKSSH*HPHCRT
Trigger: AGTCCTACAGTGTGGGTGCCAGTGGGAGCTCTTCCA...CCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp TGGTGGTGGGGGCAGACCCATCAGGGGAAGGGCCGAAGGAGGACGATTGAAGTACAAGTCCACTCCTTCTaGCATGGCTCCGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WWWGQTHQGKGRRRTIEVQVHSF*HGSGRK
Trigger: CTTCCTTCCGGAGCCATGTCAGAAGGAGTGGACTTG...TACTTCAATCGTCCTCCTTCGGCCCTTCCCCTGATGGGTCTGCCCCCACCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR TCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATCTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHLCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp CGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCATCCACACGAGCAGATaGGGGTACAAGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: RFRACASNCDRFCRVAGLIHTSR*GYKVLR
Trigger: TCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGAT...GAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR TCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAACCGAAGGAGGACGATTaGAGTAGGGCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQPKEDD*SRAAHW
Trigger: CCAGTGTGCTGCCCTACTTCAATCGTCCTCCTTCGG...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp GTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCAGGGACCCCAAAGCTTaGGGAGAGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VLPGGRPHVHFFSIKNFPRDPKA*GERWWG
Trigger: CCCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCT...GGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR TCA 90 bp GGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGGGAGGTACAGCAAGATaGGGAGGTAATCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKGRGWGGLRPLVLIKVRGGTAR*GGNRGG
Trigger: ACCTCCTCGATTACCTCCTCATCTTGCTGTACCTCC...CCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGTCAGTCTCTCTCCTCTaGCCCAGAAGGGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMSVSLL*PRRVSS
Trigger: ACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGA...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CTGCGGGGGACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACATGGGGTGCCATGTTCTaGAGTGGAGGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LRGTPSVTEGYMRNVLGTWGAMF*SGGGDG
Trigger: CCCATCCCCACCTCCACTTCAGAACATGGCACCCCA...TGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTCCCCCGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GGCCCGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: GPWRYSPSWDSDTLTFPSEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...GCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR GCA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTTCCACCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGSTRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGTGGA...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp GCAGGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATGAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: AGPWAYFGTPSHSPRSCMNCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...CATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGGTCACTGTAATCCCCTaGACTGGCTCCAGATACTGC +
Preference number: 4 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMVTVIP*TGSRYC
Trigger: GCAGTATCTGGAGCCAGTGCAGGGGATTACAGTGAC...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPGFPAASNLIGLLCLGGLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...CCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp AGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKGKGVGRPPSFSPDQGEQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...CTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGTCAGCTGCTGGTCTGTaGTCCACCAGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LPGFPAASNLIGLLCLGGSAAGL*STRRSC
Trigger: GCAGCTTCTCCTGGTGGACCACAGACCAGCAGCTGA...CCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CACTCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCAGGTATTCCCCCTCTTaGGACTCGGACACACTCACG +
Preference number: 4 (lower is better)
Translates to: HSRFRACASNCDRFCRVARYSPS*DSDTLT
Trigger: CGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCT...GGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATTGGGGGTGGAATTGGTaGTGGGGGCAGACCCATCAG +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHWGWNW*WGQTHQ
Trigger: CTGATGGGTCTGCCCCCACCACCAATTCCACCCCCA...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGTGGGGGTGGAATTGGTaGTGGGGGCAGACCCATCAG +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWWGWNW*WGQTHQ
Trigger: CTGATGGGTCTGCCCCCACCACCAATTCCACCCCCA...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCGGAAAGGGAAGGGGGTaGGGCGGCCTCCGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTAGKGRG*GGLRPL
Trigger: TAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GCAGGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATGGGAAAGGGAAGGGGGTaGGGCGGCCTCCGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: AGPWAYFGTPSHSPRSCMGKGRG*GGLRPL
Trigger: TAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC...CATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGCAGAGGGTGGTAATTaGCTCTGCCAGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQAEGGN*LCQASQ
Trigger: CTGGGAAGCCTGGCAGAGCCAATTACCACCCTCTGC...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGGATGCCACGGGAATATaGCGGCGGCGGCGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: QSFQRLPPPQHTLWTGHLDATGI*RRRRRV
Trigger: GACTCGCCGCCGCCGCCGCCATATTCCCGTGGCATC...CAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR TCA 90 bp TCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: SRFRACASNCDRFCRVAGTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...GCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR TCA 90 bp GGCCCGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: GPWRYSPSWDSDTLTFPSTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...GCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR TCA 90 bp CGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGGACTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RRTSLLPPPSAATTLQFGLCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...TCCAAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCCCGAAGGAGGACGATTaGAGTAGGGCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: CPVDACRSSITPWVPQDLPKEDD*SRAAHW
Trigger: CCAGTGTGCTGCCCTACTTCAATCGTCCTCCTTCGG...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCACCGAAGGAGGACGATTaGAGTAGGGCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: SNCDRFCRVAGLTSTFSPPKEDD*SRAAHW
Trigger: CCAGTGTGCTGCCCTACTTCAATCGTCCTCCTTCGG...TGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR TCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGAGGGACCCCAAAGCTTaGGGAGAGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRRDPKA*GERWWG
Trigger: CCCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCT...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp TTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGAGGGACCCCAAAGCTTaGGGAGAGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FLSATPPNHTKSLGSFPWRDPKA*GERWWG
Trigger: CCCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCT...CCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGAAGGCTGGATTGAGGTaGAGGGCAGGTGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGKAGLR*RAGGMA
Trigger: GGCCATCCCACCTGCCCTTCACCTCAATCCAGCCTT...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGTCCACCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPGFPAASNLIGLLCLGGSTRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGTGGA...CCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKNCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCGATCCCGGTGCCTCCTaGTGCTCTCCCGGGACCGGC +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFDPGAS*CSPGTG
Trigger: GCCGGTCCCGGGAGAGCAGCAGGAGGCACCGGGATC...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTCTCATAGGCCTTCTCTaGTTAGGAGGGGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGLIGLL*LGGASP
Trigger: TGGACTTGCCCCTCCTAAGCAGAGAAGGCCTATGAG...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CTGCGGGGGACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACATGTCCCAAGGGAATGTaGCTCTCCAATCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LRGTPSVTEGYMRNVLGTCPKGM*LSNPAG
Trigger: CCCCGCAGGATTGGAGAGGCACATTCCCTTGGGACA...TGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTCCCCCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FVSEPVPQTVTGSAGWPALNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...GGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GGCCCGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPWRYSPSWDSDTLTFPSLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...GCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp TGGGCCCGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGACTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: WARGGIPPLGTRTHSRFRLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...TCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp ATGGGCCCGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGCTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: MGPWRYSPSWDSDTLTFPLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...CGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp GTGGAGGTATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VEVFVSEPVPQTVTGSAGLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...CCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAATACCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TATCCACACGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCCATGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: YPHEQMRVQGSQRVWPVHVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...ATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATTCAGCTGCTGGTCTGTaGTCCACCAGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHSAAGL*STRRSC
Trigger: GCAGCTTCTCCTGGTGGACCACAGACCAGCAGCTGA...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GGCTTATCCACACGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTTCAGCTGCTGGTCTGTaGTCCACCAGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLSTRADEGTRFSEGVARSAAGL*STRRSC
Trigger: GCAGCTTCTCCTGGTGGACCACAGACCAGCAGCTGA...ACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGATAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544990.5
CDS-3UTR CCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATACCTGGATCAGCTGCTaGTCTGTGGTCCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHTWISC*SVVHQE
Trigger: CTCCTGGTGGACCACAGACCAGCAGCTGATCCAGGT...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCTCGGGAATGGGCCCGTaGAGGTATTCCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: WDWEDCQAVFNPVGQRVFSGMGP*RYSPSW
Trigger: CCAAGAGGGGGAATACCTCCACGGGCCCATTCCCGA...GAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340437.8
ENST00000394888.8
CDS-3UTR CCA 90 bp CTGCGGGGGACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAAGTAGGGCAGCACACTaGGGGGCTTATCCACACGAG +
Preference number: 4 (lower is better)
Translates to: LRGTPSVTEGYMRNVLGTSRAAH*GAYPHE
Trigger: CTCGTGTGGATAAGCCCCCCAGTGTGCTGCCCTACT...TGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTCCCCCGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGAGTAGGGCAGCACACTaGGGGGCTTATCCACACGAG +
Preference number: 4 (lower is better)
Translates to: LPGGRPHVHFFSIKNFPWSRAAH*GAYPHE
Trigger: CTCGTGTGGATAAGCCCCCCAGTGTGCTGCCCTACT...CCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCCACACTGTAGGACTTaGCTTCGATGCCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMPHCRT*LRCHED
Trigger: GTCTTCATGGCATCGAAGCCAAGTCCTACAGTGTGG...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGGAAGAGCTCCCACTaGCACCCACACTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: WEDCQAVFNPVGQRVFPGWKSSH*HPHCRT
Trigger: AGTCCTACAGTGTGGGTGCCAGTGGGAGCTCTTCCA...CCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTAGACTCCTTTCTCAGTaGTGCCGGTCCCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGRLLSQ*CRSRSL
Trigger: TAGAGAACGGGACCGGCACCACTGAGAAAGGAGTCT...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATGCAGAGGGTGGTAATTaGCTCTGCCAGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHAEGGN*LCQASQ
Trigger: CTGGGAAGCCTGGCAGAGCCAATTACCACCCTCTGC...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAATGCCATGTTCTGAAGTaGAGGTGGGGATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQCHVLK*RWGWGW
Trigger: CCAACCCCATCCCCACCTCCACTTCAGAACATGGCA...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCTGTCTGCCACCTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HHSLWRPGAWTCFLPVCHLCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...GTGGCAGACAGGAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTATCCACACGAGCAGATaGGGGTACAAGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGIHTSR*GYKVLR
Trigger: TCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGAT...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGCCGAAGGAGGACGATTaGAGTAGGGCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGPKEDD*SRAAHW
Trigger: CCAGTGTGCTGCCCTACTTCAATCGTCCTCCTTCGG...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGCCGAAGGAGGACGATTaGAGTAGGGCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: RVAGLTSTFSPLRTFPGRPKEDD*SRAAHW
Trigger: CCAGTGTGCTGCCCTACTTCAATCGTCCTCCTTCGG...CCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR TCA 90 bp AAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGAGGGACCCCAAAGCTTaGGGAGAGAGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KSLGSFPWQTGGVGLGGLRDPKA*GERWWG
Trigger: CCCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCT...CAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp TGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCTGGGCAGCGCAGAGTTaGAAGAGTTCAGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: WDWEDCQAVFNPVGQRVFWAAQS*KSSALW
Trigger: CCAGAGGGCTGAACTCTTTCAACTCTGCGCTGCCCA...GAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTCAGTCTCTCTCCTCTaGCCCAGAAGGGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: WEDCQAVFNPVGQRVFPGSVSLL*PRRVSS
Trigger: ACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGA...CCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGGGGTGCCATGTTCTaGAGTGGAGGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRWGAMF*SGGGDG
Trigger: CCCATCCCCACCTCCACTTCAGAACATGGCACCCCA...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TTTGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGGTTCAGTGCTGCTaGTTCTGTCATCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: FGGKGRGWGGLRPLVLIKVVQCC*FCHLRA
Trigger: AGCCCTCAGATGACAGAAGCAGCAGCACTGAACCAC...CTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp AGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: RYSPSWDSDTLTFPSLCLEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...GAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR GCA 90 bp GTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VPQTVTGSAGWPASRPLFEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...AAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR GCA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCTCCACCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CPVDACRSSITPWVPQDLSTRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGTGGA...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAATAACCTGGATCAGCTaGTGGTCTGTGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQITWIS*WSVVHQ
Trigger: CTGGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGAACCGCAGGACCTCGCTaGTGCCTCCTCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGTAGPR*CLLLQQ
Trigger: CTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGT...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCATACCCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PQTVTGSAGWPASRPLFLIPRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGTAT...GAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543545.5
CDS-3UTR GCA 90 bp CTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGACTCCCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LPGGRPHVHFFSIKNFPWTPRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGAGT...CCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541963.5
CDS-3UTR CCA 90 bp GTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: VPQTVTGSAGWPASRPLFLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...AAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GGCTTATCCACACGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLSTRADEGTRFSEGVARQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...ACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGATAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp TTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCAAACTCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FPLLGLGHTHVSEPVPQTQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...AGTTTGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCTCAGCTGCTGGTCTGTaGTCCACCAGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTASAAGL*STRRSC
Trigger: GCAGCTTCTCCTGGTGGACCACAGACCAGCAGCTGA...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCACCTGGATCAGCTGCTaGTCTGTGGTCCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLPGGRPHVHFFSIKNFPTWISC*SVVHQE
Trigger: CTCCTGGTGGACCACAGACCAGCAGCTGATCCAGGT...GGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544990.5
CDS-3UTR CCA 90 bp CACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCTGTCTGCCACTCGGGAATGGGCCCGTaGAGGTATTCCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HHSLWRPGAWTCFLPVCHSGMGP*RYSPSW
Trigger: CCAAGAGGGGGAATACCTCCACGGGCCCATTCCCGA...GTGGCAGACAGGAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340437.8
ENST00000394888.8
CDS-3UTR CCA 90 bp TTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGTGGGGGTGGAATTGGTaGTGGGGGCAGACCCATCAG +
Preference number: 4 (lower is better)
Translates to: FLSATPPNHTKSLGSFPWWGWNW*WGQTHQ
Trigger: CTGATGGGTCTGCCCCCACCACCAATTCCACCCCCA...CCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCACTCACTGTAGAGGGTaGAGGGCCCGAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: WDWEDCQAVFNPVGQRVFTHCRG*RARISA
Trigger: AGCCGAGATTCGGGCCCTCCACCCTCTACAGTGAGT...GAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTTTAGGTTCTTTCCCCTaGCAAACAGGAGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGLGSFP*QTGGVG
Trigger: TCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAA...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCCTGAGGGCAGGACCCTaGGCATATTTTGGCACACCC +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTALRAGP*AYFGTP
Trigger: GGGTGTGCCAAAATATGCCCAGGGTCCTGCCCTCAG...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGGCTCCATGTGTTAAATaGAAAAGCCCCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GKGRGWGGLRPLVLIKVRAPCVK*KSPRER
Trigger: CCTTTCCCTGGGGCTTTTCCATTTAACACATGGAGC...CCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGTCCCCATCTCCCAATaGGCAGTACCTTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: RKGKGVGRPPSFSPDQGEVPISQ*AVPSSK
Trigger: TTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGAC...CTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CACCACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGATGCCACGGGAATATaGCGGCGGCGGCGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: HHIIDSYRANNLDQLLVCDATGI*RRRRRV
Trigger: GACTCGCCGCCGCCGCCGCCATATTCCCGTGGCATC...ACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000537162.5
CDS-3UTR CCA 90 bp CTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTGATGCCACGGGAATATaGCGGCGGCGGCGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: LVGVPTICGQSFQRLPPPDATGI*RRRRRV
Trigger: GACTCGCCGCCGCCGCCGCCATATTCCCGTGGCATC...AGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCTCGGGAATGGGCCCGTaGAGGTATTCGTTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTASGMGP*RYSFPS
Trigger: GCTCGGAAACGAATACCTCCACGGGCCCATTCCCGA...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGATCGGGAATGGGCCCGTaGAGGTATTCGTTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: CDRFCRVAGLTSTFSPLRSGMGP*RYSFPS
Trigger: GCTCGGAAACGAATACCTCCACGGGCCCATTCCCGA...TCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR TCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp TGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGATCCACACGAGCAGATaGGGGTACAAGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: WEDCQAVFNPVGQRVFPGIHTSR*GYKVLR
Trigger: TCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGAT...CCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp CCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCATCCACACGAGCAGATaGGGGTACAAGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: PQTVTGSAGWPASRPLFLIHTSR*GYKVLR
Trigger: TCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGAT...GAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR TCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGGGAGGTACAGCAAGATaGGGAGGTAATCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWGGTAR*GGNRGG
Trigger: ACCTCCTCGATTACCTCCTCATCTTGCTGTACCTCC...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTAAGGCTGGATTGAGGTaGAGGGCAGGTGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCKAGLR*RAGGMA
Trigger: GGCCATCCCACCTGCCCTTCACCTCAATCCAGCCTT...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATCATCAACCTCACCATTaGACGGCTCCCGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHHQPHH*TAPGES
Trigger: TGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATG...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp AGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGCTTAGAACTCTGAGCTaGGTTCATTCAAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: RKGKGVGRPPSFSPDQGELRTLS*VHSSRA
Trigger: AGCCCGACTTGAATGAACTCAGCTCAGAGTTCTAAG...CTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGTGGTCCTTAGAACTCTaGGCTGAGTTCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: GKGRGWGGLRPLVLIKVRWSLEL*AEFIQV
Trigger: GACTTGAATGAACTCAGCTCAGAGTTCTAAGGACCA...CCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGATGGGGTGCCATGTTCTaGAGTGGAGGTGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGWGAMF*SGGGDG
Trigger: CCCATCCCCACCTCCACTTCAGAACATGGCACCCCA...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGGTGGTTCAGTGCTGCTaGTTCTGTCATCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWVVQCC*FCHLRA
Trigger: AGCCCTCAGATGACAGAAGCAGCAGCACTGAACCAC...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp GTGGAGGTATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: VEVFVSEPVPQTVTGSAGEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...CCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAATACCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR GCA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPNCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTGTCACTGTAATCCCCTaGACTGGCTCCAGATACTGC +
Preference number: 4 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPVTVIP*TGSRYC
Trigger: GCAGTATCTGGAGCCAGTGCAGGGGATTACAGTGAC...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGGTCACTGTAATCCCCTaGACTGGCTCCAGATACTGC +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWVTVIP*TGSRYC
Trigger: GCAGTATCTGGAGCCAGTGCAGGGGATTACAGTGAC...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp GTGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTTCCCGGTGTCTCTCATaGTCCCGGTTCCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VGLGGLPSSLQSCGAEGISRCLS*SRFLSW
Trigger: CCAAGAAAGGAACCGGGAGCATGAGAGACACCGGGA...AATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGCTCCTTTCTCAGTGGTaGCGGTCCCGTTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGLLSQW*RSRSLS
Trigger: GGATAGAGAACGGGACCGGCACCACTGAGAAAGGAG...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GTGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCTCCTTTCTCAGTGGTaGCGGTCCCGTTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: VGLGGLPSSLQSCGAEGILLSQW*RSRSLS
Trigger: GGATAGAGAACGGGACCGGCACCACTGAGAAAGGAG...AATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp TTTGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGTGGGATTGGGAGGACTaGCAAGCAGTCTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: FGGKGRGWGGLRPLVLIKWDWED*QAVFNP
Trigger: AGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA...CTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp GTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTGGTGGTAATTGGCTCTaGCAGGCTTCCCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VVIGSARLPSSKQPHRPSGGNWL*QASQQQ
Trigger: TTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACC...AGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGGTAATTGGCTCTaGCAGGCTTCCCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLGGNWL*QASQQQ
Trigger: TTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACC...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAATGCCCTGTAGATGCATaGAGAAGTAGCATCACCCCA +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQCPVDA*RSSITP
Trigger: TGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGCCCTGTAGATGCATaGAGAAGTAGCATCACCCCA +
Preference number: 4 (lower is better)
Translates to: WEDCQAVFNPVGQRVFPGCPVDA*RSSITP
Trigger: TGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA...CCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTCCCAAGGGAATGTaGCTCTCCAATCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRCPKGM*LSNPAG
Trigger: CCCCGCAGGATTGGAGAGGCACATTCCCTTGGGACA...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCTGTCTGCCACGCCAGTTGGGTGGGGTaGCATGTTCTGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HHSLWRPGAWTCFLPVCHASWVG*HVLKWR
Trigger: CCTCCACTTCAGAACATGGCACCCCACCCAACTGGC...GTGGCAGACAGGAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGGCCAGTTGGGTGGGGTaGCATGTTCTGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVASWVG*HVLKWR
Trigger: CCTCCACTTCAGAACATGGCACCCCACCCAACTGGC...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTACAACCCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NCDRFCRVAGLTSTFSPLQPRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGTTG...TAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR CCA 90 bp TGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTCCACTCCTTCTGACATaGCTCCGGAAGGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: CRVAGLTSTFSPLRTFPGPLLLT*LRKEDR
Trigger: GCGATCTTCCTTCCGGAGCCATGTCAGAAGGAGTGG...ACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp TTTGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FGGKGRGWGGLRPLVLIKLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...CTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCCTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: CPVDACRSSITPWVPQDLLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RFCRVAGLTSTFSPLRTFLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...GAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCTGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: EFSEATTTSAYPLDWPFAVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...AGCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GCCCGTGGAGGTATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: ARGGIRFRACASNCDRFCSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...GCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAATACCTCCACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCAATCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VFPLLGLGHTHVSEPVPQSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...TTGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp ATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: IRFRACASNCDRFCRVAGAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...GCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CCA 90 bp GCAGGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATGGGTTCTCAGAGGGTGTaGCCCGTCCATCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: AGPWAYFGTPSHSPRSCMGSQRV*PVHQQN
Trigger: ATTCTGCTGATGGACGGGCCACACCCTCTGAGAACC...CATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCGGTTCTCAGAGGGTGTaGCCCGTCCATCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: VDRVFRGYHHLSIPFGLAGSQRV*PVHQQN
Trigger: ATTCTGCTGATGGACGGGCCACACCCTCTGAGAACC...GGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CCA 90 bp TTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGACTCACTGTAGAGGGTaGAGGGCCCGAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FLSATPPNHTKSLGSFPWTHCRG*RARISA
Trigger: AGCCGAGATTCGGGCCCTCCACCCTCTACAGTGAGT...CCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTAGCGATGTCTTTTCCTaGAAGAGCTCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPSDVFS*KSSHWH
Trigger: GTGCCAGTGGGAGCTCTTCCAGGAAAAGACATCGCT...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCAGCGATGTCTTTTCCTaGAAGAGCTCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: CPVDACRSSITPWVPQDLSDVFS*KSSHWH
Trigger: GTGCCAGTGGGAGCTCTTCCAGGAAAAGACATCGCT...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATTATTCCCTGGGTGTCTaGAGGGAGTTAGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHYSLGV*RELGVW
Trigger: CCAAACCCCTAACTCCCTCCAGACACCCAGGGAATA...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCTGCCATGTTCTGAAGTaGAGGTGGGGATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: WDWEDCQAVFNPVGQRVFCHVLK*RWGWGW
Trigger: CCAACCCCATCCCCACCTCCACTTCAGAACATGGCA...GAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGTCGGGAATGGGCCCGTaGAGGTATTCGTTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: FLSATPPNHTKSLGSFPWSGMGP*RYSFPS
Trigger: GCTCGGAAACGAATACCTCCACGGGCCCATTCCCGA...CCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTCAAGTCCACTCCTTCTaGCATGGCTCCGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFQVHSF*HGSGRK
Trigger: CTTCCTTCCGGAGCCATGTCAGAAGGAGTGGACTTG...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CTAAGAGCTGGTTATTGCAAGAGGTACCCAAGCACTAAGCAGCAGAGGGTGGTAAAGGCTGGATTGAGGTaGAGGGCAGGTGGGATGGCC +
Preference number: 4 (lower is better)
Translates to: LRAGYCKRYPSTKQQRVVKAGLR*RAGGMA
Trigger: GGCCATCCCACCTGCCCTTCACCTCAATCCAGCCTT...TACCACCCTCTGCTGCTTAGTGCTTGGGTACCTCTTGCAATAACCAGCTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGTGCCGATCTTCATTATaGAGCAGATCCCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLCRSSL*SRSRCL
Trigger: GAGGCACCGGGATCTGCTTCATAATGAAGATCGGCA...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCCATCAACCTCACCATTaGACGGCTCCCGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTAHQPHH*TAPGES
Trigger: TGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATG...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GCAGGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATGGTGGTTCAGTGCTGCTaGTTCTGTCATCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AGPWAYFGTPSHSPRSCMVVQCC*FCHLRA
Trigger: AGCCCTCAGATGACAGAAGCAGCAGCACTGAACCAC...CATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VVIGSARLPSSKQPHRPSEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...AGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: RVAGLTSTFSPLRTFPGREVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...CCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR GCA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp CAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTTCCACCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QVLPGGRPHVHFFSIKNFSTRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGTGGA...AAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544990.5
CDS-3UTR GCA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGATAACCTGGATCAGCTaGTGGTCTGTGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLITWIS*WSVVHQ
Trigger: CTGGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp GGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGCTTTGGAAATGGCACTaGTGGAAATTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GKGRGWGGLRPLVLIKVRLWKWH*WKLLCF
Trigger: GAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAG...CCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTTCCCGGTGTCTCTCATaGTCCCGGTTCCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFSRCLS*SRFLSW
Trigger: CCAAGAAAGGAACCGGGAGCATGAGAGACACCGGGA...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTGTTTTCTTCCTGTCTaGCACCCCTCCCAATCACAC +
Preference number: 4 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPCFLPV*HPSQSH
Trigger: GTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAACA...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGTGTCCCAAGGGAATGTaGCTCTCCAATCCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVCPKGM*LSNPAG
Trigger: CCCCGCAGGATTGGAGAGGCACATTCCCTTGGGACA...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CTGCGGGGGACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACATTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRGTPSVTEGYMRNVLGTLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...TGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTCCCCCGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GCCCGTGGAGGTATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ARGGIRFRACASNCDRFCLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...GCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAATACCTCCACGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TACAAGGTTCTCAGAGGGTGTGGCCCGTCCATCAGCAGAATCACTAGAATCTCGTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: YKVLRGCGPSISRITRISLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...CGAGATTCTAGTGATTCTGCTGATGGACGGGCCACACCCTCTGAGAACCTTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GTGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VGLGGLPSSLQSCGAEGISCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...AATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp ATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTCGTTTCCGAGCCTGTGCTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: ITRISGMGPWRYSFPSLCSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...GCACAGGCTCGGAAACGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAACCTGGATCAGCTGCTaGTCTGTGGTCCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGTWISC*SVVHQE
Trigger: CTCCTGGTGGACCACAGACCAGCAGCTGATCCAGGT...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGGAGAATCAGAAACTCACCTGGATCAGCTGCTaGTCTGTGGTCCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSLPINLTIERLPENQKLTWISC*SVVHQE
Trigger: CTCCTGGTGGACCACAGACCAGCAGCTGATCCAGGT...GAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGAGGTATTCCCCCTCTTaGGACTCGGACACACTCACG +
Preference number: 4 (lower is better)
Translates to: FLSATPPNHTKSLGSFPWRYSPS*DSDTLT
Trigger: CGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCT...CCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340437.8
ENST00000394888.8
CDS-3UTR CCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTCTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCCC +
Preference number: 4 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFLESRE*ARGGIP
Trigger: GGGAATACCTCCACGGGCCCATTCCCGAGATTCTAG...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340437.8
ENST00000394888.8
CDS-3UTR CCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGGTTCTCAGAGGGTGTaGCCCGTCCATCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFGSQRV*PVHQQN
Trigger: ATTCTGCTGATGGACGGGCCACACCCTCTGAGAACC...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTAGTAGGGCAGCACACTaGGGGGCTTATCCACACGAG +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGSRAAH*GAYPHE
Trigger: CTCGTGTGGATAAGCCCCCCAGTGTGCTGCCCTACT...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCACTGTAGCGTTTGGTaGGGGGAAGAAGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: VVIGSARLPSSKQPHRPSHCSVW*GEEGWI
Trigger: AATCCAGCCTTCTTCCCCCCACCAAACGCTACAGTG...AGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATCTTCATGTAAGTATCTaGTGGAGGCCCCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHLHVSI*WRPHCS
Trigger: GCTACAGTGGGGCCTCCACCAGATACTTACATGAAG...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTCTCCAGATACTGCTTTaGAAATGGCACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGLQILL*KWHCWK
Trigger: TTTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAG...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATCCACACTGTAGGACTTaGCTTCGATGCCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHPHCRT*LRCHED
Trigger: GTCTTCATGGCATCGAAGCCAAGTCCTACAGTGTGG...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGTGGAAGAGCTCCCACTaGCACCCACACTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: FLSATPPNHTKSLGSFPWWKSSH*HPHCRT
Trigger: AGTCCTACAGTGTGGGTGCCAGTGGGAGCTCTTCCA...CCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCTATTCCCTGGGTGTCTaGAGGGAGTTAGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTAYSLGV*RELGVW
Trigger: CCAAACCCCTAACTCCCTCCAGACACCCAGGGAATA...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGCAGTCTTCAATCCTGTaGGGCAGAGGGTATTCCCTG +
Preference number: 4 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGQSSIL*GRGYSL
Trigger: CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTG...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTTAGGTTCTTTCCCCTaGCAAACAGGAGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPLGSFP*QTGGVG
Trigger: TCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAA...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTGCAGAGGGTGGTAATTaGCTCTGCCAGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGAEGGN*LCQASQ
Trigger: CTGGGAAGCCTGGCAGAGCCAATTACCACCCTCTGC...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGGCTCCATGTGTTAAATaGAAAAGCCCCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: LPGFPAASNLIGLLCLGGAPCVK*KSPRER
Trigger: CCTTTCCCTGGGGCTTTTCCATTTAACACATGGAGC...CCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTAGTAGCATCACCCCATaGGTACCGCAGGACCTCGCT +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGSSITP*VPQDLA
Trigger: AGCGAGGTCCTGCGGTACCCATGGGGTGATGCTACT...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCGT +
Preference number: 4 (lower is better)
Translates to: VGLGGLPSSLQSCGAEGILESRE*ARGGIR
Trigger: ACGAATACCTCCACGGGCCCATTCCCGAGATTCTAG...AATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGCAAGTCCACTCCTTCTaGCATGGCTCCGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVQVHSF*HGSGRK
Trigger: CTTCCTTCCGGAGCCATGTCAGAAGGAGTGGACTTG...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTCAAGTCCACTCCTTCTaGCATGGCTCCGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCQVHSF*HGSGRK
Trigger: CTTCCTTCCGGAGCCATGTCAGAAGGAGTGGACTTG...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp GTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: VLPGGRPHVHFFSIKNFPTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...GGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR TCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFLCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp ATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTCTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ICGQSFQRLPPPQHTLWTLCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...AGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000537162.5
CDS-3UTR TCA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGCCGAAGGAGGACGATTaGAGTAGGGCAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKPKEDD*SRAAHW
Trigger: CCAGTGTGCTGCCCTACTTCAATCGTCCTCCTTCGG...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCTCTGTTTCGCTTCATaGTATCTTCAAATTCGGCTT +
Preference number: 4 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMLCFAS*YLQIRL
Trigger: AAGCCGAATTTGAAGATATCATGAAGCGAAACAGAG...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATTTGGCTTCGATGCCATaGAGACAGTCCTTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHLASMP*RQSLRE
Trigger: CTCTCTTAAGGACTGTCTTCATGGCATCGAAGCCAA...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGCATCAACCTCACCATTaGACGGCTCCCGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKHQPHH*TAPGES
Trigger: TGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATG...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTTGGGCAGCGCAGAGTTaGAAGAGTTCAGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSWAAQS*KSSALW
Trigger: CCAGAGGGCTGAACTCTTTCAACTCTGCGCTGCCCA...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGATCTCGTCCCTCAGATaGCCCCAGGAGAAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: YRANNLDQLLVCGPHYHRISSLR*PQEKLP
Trigger: GGGCAGCTTCTCCTGGGGTCATCTGAGGGACGAGAT...CCTGTGATAATGTGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR GCA 90 bp CGTCCATCAGCAGAATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTCGTGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: RPSAESLESREWARGGIREVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...ACGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGATGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR GCA 90 bp CGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RGGIPPLGTRTHSRFRACVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...ACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR GCA 90 bp TGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGTTCAAGAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: WSVVHIITGPSNDHQEFKNCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...CTTGAACTCTTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR GCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGGCACTGCTGGAAATTaGTCTGTTTCGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQGTAGN*SVSLHD
Trigger: ATCATGAAGCGAAACAGAGCAATTTCCAGCAGTGCC...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGAGCAGCGTCTCAATTaGGTCACTGTAATCCCCTGC +
Preference number: 4 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFEQRLN*VTVIPC
Trigger: GCAGGGGATTACAGTGACGCAATTGAGACGCTGCTC...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGGAGCAGCGTCTCAATTaGGTCACTGTAATCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKEQRLN*VTVIPC
Trigger: GCAGGGGATTACAGTGACGCAATTGAGACGCTGCTC...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGATCCCGGTGCCTCCTaGTGCTCTCCCGGGACCGGC +
Preference number: 4 (lower is better)
Translates to: INRQYVRGKAGTEVAFHKDPGAS*CSPGTG
Trigger: GCCGGTCCCGGGAGAGCAGCAGGAGGCACCGGGATC...CTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGATCCCGGTGTCTCTCATaGTCCCGGTTCCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGSRCLS*SRFLSW
Trigger: CCAAGAAAGGAACCGGGAGCATGAGAGACACCGGGA...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp GCAGGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATGTGGGATTGGGAGGACTaGCAAGCAGTCTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: AGPWAYFGTPSHSPRSCMWDWED*QAVFNP
Trigger: AGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA...CATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCTGTTTTCTTCCTGTCTaGCACCCCTCCCAATCACAC +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTACFLPV*HPSQSH
Trigger: GTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAACA...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGGTGGTAATTGGCTCTaGCAGGCTTCCCAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGGGNWL*QASQQQ
Trigger: TTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACC...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGATGTTAGGTGTCAGATaGCCTGTAGATGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: LPGFPAASNLIGLLCLGGMLGVR*PVDACR
Trigger: TCTGCATGCATCTACAGGGCATCTGACACCTAACAT...CCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTCCACTCCTTCTGACATaGCTCCGGAAGGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGPLLLT*LRKEDR
Trigger: GCGATCTTCCTTCCGGAGCCATGTCAGAAGGAGTGG...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGGATTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RRTSLLPPPSAATTLQFGLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...TCCAAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LPGFPAASNLIGLLCLGGCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...CCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: QVLPGGRPHVHFFSIKNFLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...AAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp TCAGCTGCTGGTCTGTGGTCCATTAATCATTGCTTTCTTCGGCACCAGTACGTCTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: SAAGLWSINHCFLRHQYVLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...GACGTACTGGTGCCGAAGAAAGCAATGATTAATGGACCACAGACCAGCAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp TATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: YRANNLDQLLVCGPHYHRVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...CCTGTGATAATGTGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR CCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RVFRGYHHLSIPFGLAICQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...GCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp GACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DRVFRGYHHLSIPFGLAIQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...AATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCTCAGCTGCTGGTCTGTaGTCCACCAGGAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRVSSDPMSHMPSLISHASAAGL*STRRSC
Trigger: GCAGCTTCTCCTGGTGGACCACAGACCAGCAGCTGA...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCAAACTGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: FPLLGLGHTHVSEPVPQTAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...AGTTTGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR CCA 90 bp CTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: LPGGRPHVHFFSIKNFPWAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...CCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp GGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGGAGAATCAGAAACTCAGGTATTCCCCCTCTTaGGACTCGGACACACTCACG +
Preference number: 4 (lower is better)
Translates to: GSLPINLTIERLPENQKLRYSPS*DSDTLT
Trigger: CGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCT...GAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340437.8
ENST00000394888.8
CDS-3UTR CCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTCTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCCC +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCLESRE*ARGGIP
Trigger: GGGAATACCTCCACGGGCCCATTCCCGAGATTCTAG...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340437.8
ENST00000394888.8
CDS-3UTR CCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGTTCTCAGAGGGTGTaGCCCGTCCATCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCGSQRV*PVHQQN
Trigger: ATTCTGCTGATGGACGGGCCACACCCTCTGAGAACC...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGTGGGGGTGGAATTGGTaGTGGGGGCAGACCCATCAG +
Preference number: 4 (lower is better)
Translates to: YRANNLDQLLVCGPHYHRWGWNW*WGQTHQ
Trigger: CTGATGGGTCTGCCCCCACCACCAATTCCACCCCCA...CCTGTGATAATGTGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGCACTGTAGCGTTTGGTaGGGGGAAGAAGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRHCSVW*GEEGWI
Trigger: AATCCAGCCTTCTTCCCCCCACCAAACGCTACAGTG...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GCAGGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATGCTTCATGTAAGTATCTaGTGGAGGCCCCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: AGPWAYFGTPSHSPRSCMLHVSI*WRPHCS
Trigger: GCTACAGTGGGGCCTCCACCAGATACTTACATGAAG...CATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCACTCACTGTAGAGGGTaGAGGGCCCGAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: RRVSSDPMSHMPSLISHATHCRG*RARISA
Trigger: AGCCGAGATTCGGGCCCTCCACCCTCTACAGTGAGT...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGGAGAATCAGAAACTCTGGAAGAGCTCCCACTaGCACCCACACTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: GSLPINLTIERLPENQKLWKSSH*HPHCRT
Trigger: AGTCCTACAGTGTGGGTGCCAGTGGGAGCTCTTCCA...GAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGAGCGATGTCTTTTCCTaGAAGAGCTCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKSDVFS*KSSHWH
Trigger: GTGCCAGTGGGAGCTCTTCCAGGAAAAGACATCGCT...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTAGACTCCTTTCTCAGTaGTGCCGGTCCCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFRLLSQ*CRSRSL
Trigger: TAGAGAACGGGACCGGCACCACTGAGAAAGGAGTCT...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGAGACTCCTTTCTCAGTaGTGCCGGTCCCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRRLLSQ*CRSRSL
Trigger: TAGAGAACGGGACCGGCACCACTGAGAAAGGAGTCT...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CAAAGAAGTGGTATGTTAGCAAGGGGTTTGGACCCTCTTGGCCCCATTAAATCTGGAAAGGGAAGGGGGTaGGGCGGCCTCCGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: QRSGMLARGLDPLGPIKSGKGRG*GGLRPL
Trigger: TAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC...AGATTTAATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACATACCACTTCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTaGGGCAGAGGGTATTCCCTG +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKQSSIL*GRGYSL
Trigger: CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTG...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGCAGTCTTCAATCCTGTaGGGCAGAGGGTATTCCCTG +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRQSSIL*GRGYSL
Trigger: CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTG...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTTTAGGTTCTTTCCCCTaGCAAACAGGAGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VGLGGLPSSLQSCGAEGILGSFP*QTGGVG
Trigger: TCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAA...AATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCAGTAGCATCACCCCATaGGTACCGCAGGACCTCGCT +
Preference number: 4 (lower is better)
Translates to: RRVSSDPMSHMPSLISHASSITP*VPQDLA
Trigger: AGCGAGGTCCTGCGGTACCCATGGGGTGATGCTACT...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CGTCCATCAGCAGAATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTCGTCTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCGT +
Preference number: 4 (lower is better)
Translates to: RPSAESLESREWARGGIRLESRE*ARGGIR
Trigger: ACGAATACCTCCACGGGCCCATTCCCGAGATTCTAG...ACGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGATGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp ATCAGCAGAATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTCGTTTCCGCCACCTCAGCATACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: ISRITRISGMGPWRYSFPPPQHT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTATGCTGAGGTGG...CGGAAACGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544990.5
CDS-3UTR TCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp CTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSLVGVPTICGQSFQRLPLCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...TGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR TCA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGATCCACACGAGCAGATaGGGGTACAAGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVIHTSR*GYKVLR
Trigger: TCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGAT...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GTGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTTTGGCTTCGATGCCATaGAGACAGTCCTTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: VGLGGLPSSLQSCGAEGILASMP*RQSLRE
Trigger: CTCTCTTAAGGACTGTCTTCATGGCATCGAAGCCAA...AATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp ATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGCCGGGACCGGCTAGGTaGCCTTTCCCGGGAGCGATG +
Preference number: 4 (lower is better)
Translates to: INRQYVRGKAGTEVAFHKPGPAR*PFPGAM
Trigger: CATCGCTCCCGGGAAAGGTCACCTAGCCGGTCCCGG...CTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp AACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGTAGAGGGGCAAGTCCACTaGGAAGGCTGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: NRQYVRGKAGTEVAFHKVEGQVH*EGWAAQ
Trigger: CTGCGCTGCCCAGCCTTCTCAGTGGACTTGCCCCTC...TACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp AAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGAGGGTTCTTCATTGCTaGGGTCCCAATGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: KSLGSFPWQTGGVGLGGLRVLHC*GPNVPI
Trigger: GATGGGGACATTGGGACCTCAGCAATGAAGAACCCT...CAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTTCAGTCTCTCTCCTCTaGCCCAGAAGGGTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGSVSLL*PRRVSS
Trigger: ACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGA...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGGGCACTGCTGGAAATTaGTCTGTTTCGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWGTAGN*SVSLHD
Trigger: ATCATGAAGCGAAACAGAGCAATTTCCAGCAGTGCC...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp TGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCACTGGCTCCAGATACTaGTTTGGAAATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: WDWEDCQAVFNPVGQRVFTGSRY*FGNGTA
Trigger: AGCAGTGCCATTTCCAAAGCAGTATCTGGAGCCAGT...GAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTGATCCCGGTGCCTCCTaGTGCTCTCCCGGGACCGGC +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTDPGAS*CSPGTG
Trigger: GCCGGTCCCGGGAGAGCAGCAGGAGGCACCGGGATC...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CTAAGAGCTGGTTATTGCAAGAGGTACCCAAGCACTAAGCAGCAGAGGGTGGTACTCCTTTCTCAGTGGTaGCGGTCCCGTTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: LRAGYCKRYPSTKQQRVVLLSQW*RSRSLS
Trigger: GGATAGAGAACGGGACCGGCACCACTGAGAAAGGAG...TACCACCCTCTGCTGCTTAGTGCTTGGGTACCTCTTGCAATAACCAGCTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGTGGGATTGGGAGGACTaGCAAGCAGTCTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVWDWED*QAVFNP
Trigger: AGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGGAGAATCAGAAACTCCTCATAGGCCTTCTCTaGTTAGGAGGGGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GSLPINLTIERLPENQKLLIGLL*LGGASP
Trigger: TGGACTTGCCCCTCCTAAGCAGAGAAGGCCTATGAG...GAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCACCTGCCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: IIDSYRANNLDQLLVCGPPARRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGCAGG...TGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536145.3
CDS-3UTR CCA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGCCACTCCTTCTGACATaGCTCCGGAAGGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKPLLLT*LRKEDR
Trigger: GCGATCTTCCTTCCGGAGCCATGTCAGAAGGAGTGG...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GQSFQRLPPPQHTLWTGHLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...ATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp CTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LGTRTHSRFRACASNCDRCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...CCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: HIIDSYRANNLDQLLVCGLGDGS*RTGGGG
Trigger: ACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAA...ACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp TGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGTTCAAGGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: WSVVHIITGPSNDHQEFKVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...CTTGAACTCTTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR CCA 90 bp ACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TFPGRSSNNLWTEFSEATVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...GGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGATCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCTTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: EFSEATTTSAYPLDWPFASCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...AGCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp GTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VAGLTSTFSPLRTFPGRSSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...ACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTAIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CGTCCATCAGCAGAATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTCCCATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: RPSAESLESREWARGGIPIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...GGGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGATGGACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR CCA 90 bp GTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: VVIGSARLPSSKQPHRPSAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...AGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTAAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp AGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACTCGGGAATGGGCCCGTaGAGGTATTCCCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSNNLWTEFSEATTTSAYSGMGP*RYSPSW
Trigger: CCAAGAGGGGGAATACCTCCACGGGCCCATTCCCGA...GTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR CCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCAGTAGGGCAGCACACTaGGGGGCTTATCCACACGAG +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFSRAAH*GAYPHE
Trigger: CTCGTGTGGATAAGCCCCCCAGTGTGCTGCCCTACT...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGAAGTAGGGCAGCACACTaGGGGGCTTATCCACACGAG +
Preference number: 4 (lower is better)
Translates to: QFVDRVFRGYHHLSIPFGSRAAH*GAYPHE
Trigger: CTCGTGTGGATAAGCCCCCCAGTGTGCTGCCCTACT...TCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CCA 90 bp AAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCACTGTAGCGTTTGGTaGGGGGAAGAAGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: KSLGSFPWQTGGVGLGGLHCSVW*GEEGWI
Trigger: AATCCAGCCTTCTTCCCCCCACCAAACGCTACAGTG...CAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGCTTCATGTAAGTATCTaGTGGAGGCCCCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVLHVSI*WRPHCS
Trigger: GCTACAGTGGGGCCTCCACCAGATACTTACATGAAG...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGAGCGATGTCTTTTCCTaGAAGAGCTCCCACTGGCAC +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVSDVFS*KSSHWH
Trigger: GTGCCAGTGGGAGCTCTTCCAGGAAAAGACATCGCT...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTAGACTCCTTTCTCAGTaGTGCCGGTCCCGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCRLLSQ*CRSRSL
Trigger: TAGAGAACGGGACCGGCACCACTGAGAAAGGAGTCT...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTTATTCCCTGGGTGTCTaGAGGGAGTTAGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCYSLGV*RELGVW
Trigger: CCAAACCCCTAACTCCCTCCAGACACCCAGGGAATA...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTCAGTCTTCAATCCTGTaGGGCAGAGGGTATTCCCTG +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGQSSIL*GRGYSL
Trigger: CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTG...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTAAGCACCATTCTCTATaGAGACCAGGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCKHHSL*RPGAWT
Trigger: TGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTT...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGAGGATCTATTTTCTTTaGGAAGGAAGTCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: RKGKGVGRPPSFSPDQGERIYFL*EGSLPI
Trigger: GATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCT...CTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGAACCCTGGGCATATTTTaGCACACCCAGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGTLGIF*HTQSLS
Trigger: GGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGT...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGACCCTGGGCATATTTTaGCACACCCAGTCACTCTCC +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVTLGIF*HTQSLS
Trigger: GGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGT...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTCCCTCCTCAAAGGGCTaGAAAGGTAAAGGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPPSSKG*KGKGVK
Trigger: TTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGG...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAAAGAGTTCAGCCCTCTaGGAGGTCAAAGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQKSSAL*EVKEIN
Trigger: GTTTATTTCTTTGACCTCCCAGAGGGCTGAACTCTT...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCTGTCTGCCACGTCCCCATCTCCCAATaGGCAGTACCTTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: HHSLWRPGAWTCFLPVCHVPISQ*AVPSSK
Trigger: TTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGAC...GTGGCAGACAGGAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAACATCACTTAACACTTaGCCAGTTGGGTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGTSLNT*PVGWGA
Trigger: GGCACCCCACCCAACTGGCCAAGTGTTAAGTGATGT...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTACATCACTTAACACTTaGCCAGTTGGGTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGTSLNT*PVGWGA
Trigger: GGCACCCCACCCAACTGGCCAAGTGTTAAGTGATGT...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCTACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: EFSEATTTSAYPLDWPFATLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...AGCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR TCA 90 bp CAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: QSFQRLPPPQHTLWTGHLTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...CAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR TCA 90 bp GCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: AGLTSTFSPLRTFPGRSSTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...GGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR TCA 90 bp CACTCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCTCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: HSRFRACASNCDRFCRVASYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...GGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR TCA 90 bp GAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACTGTGCCTCAAACTGTaGCAGGTTCTGCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: ELSLVGVPTICGQSFQRLLCLKL*QVLPGG
Trigger: GCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAG...TAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR TCA 90 bp AAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGATCCACACGAGCAGATaGGGGTACAAGGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KSLGSFPWQTGGVGLGGLIHTSR*GYKVLR
Trigger: TCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGAT...CAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCGGAGGTACAGCAAGATaGGGAGGTAATCGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RRVSSDPMSHMPSLISHAGGTAR*GGNRGG
Trigger: ACCTCCTCGATTACCTCCTCATCTTGCTGTACCTCC...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCTGCCGATCTTCATTATaGAGCAGATCCCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: RRVSSDPMSHMPSLISHACRSSL*SRSRCL
Trigger: GAGGCACCGGGATCTGCTTCATAATGAAGATCGGCA...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGTTTAGTCCAATTCAGTGCCGATCTTCATTATaGAGCAGATCCCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: EGYMRNVLGTEDGFSPIQCRSSL*SRSRCL
Trigger: GAGGCACCGGGATCTGCTTCATAATGAAGATCGGCA...CTGAATTGGACTAAACCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp ATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGAGGGGCAAGTCCACTaGGAAGGCTGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: INRQYVRGKAGTEVAFHKEGQVH*EGWAAQ
Trigger: CTGCGCTGCCCAGCCTTCTCAGTGGACTTGCCCCTC...CTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTAGGGTTCTTCATTGCTaGGGTCCCAATGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSRVLHC*GPNVPI
Trigger: GATGGGGACATTGGGACCTCAGCAATGAAGAACCCT...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGAAGACACCAAATTTGTaGCTTTACCTGCCTACTAGT +
Preference number: 4 (lower is better)
Translates to: LPGFPAASNLIGLLCLGGKTPNL*LYLPTS
Trigger: ACTAGTAGGCAGGTAAAGTCACAAATTTGGTGTCTT...CCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGCTTAGAACTCTGAGCTaGGTTCATTCAAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRLRTLS*VHSSRA
Trigger: AGCCCGACTTGAATGAACTCAGCTCAGAGTTCTAAG...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTGACTCCCTCAGTGACTaGGGGCTATATGAGAAACGT +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGDSLSD*GLYEKR
Trigger: ACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTC...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGGAGAATCAGAAACTCGACTCCCTCAGTGACTaGGGGCTATATGAGAAACGT +
Preference number: 4 (lower is better)
Translates to: GSLPINLTIERLPENQKLDSLSD*GLYEKR
Trigger: ACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTC...GAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GATCAGCTGCTGGTCTGTGGTCCATTAATCATTGCTTTCTTCGGCACCAGTACGGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: DQLLVCGPLIIAFFGTSTEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...CGTACTGGTGCCGAAGAAAGCAATGATTAATGGACCACAGACCAGCAGCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
CDS-3UTR GCA 90 bp ACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: TEFSEATTTSAYPLDWPFEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...AAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp GAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCCATCAGCAGAATGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: EQMRVQGSQRVWPVHQQNVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...ATTCTGCTGATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR GCA 90 bp GCCCGTCCATCAGCAGAATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: ARPSAESLESREWARGGIVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...AATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGATGGACGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000544990.5
CDS-3UTR GCA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCATAACCTGGATCAGCTaGTGGTCTGTGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RRVSSDPMSHMPSLISHAITWIS*WSVVHQ
Trigger: CTGGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCTTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: RYSPSWDSDTLTFPSLCLFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...GAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR GCA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGCACTGCTGGAAATTaGTCTGTTTCGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLGTAGN*SVSLHD
Trigger: ATCATGAAGCGAAACAGAGCAATTTCCAGCAGTGCC...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGACTGGCTCCAGATACTaGTTTGGAAATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRTGSRY*FGNGTA
Trigger: AGCAGTGCCATTTCCAAAGCAGTATCTGGAGCCAGT...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGATGGGATTGGGAGGACTaGCAAGCAGTCTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGWDWED*QAVFNP
Trigger: AGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTCTCATAGGCCTTCTCTaGTTAGGAGGGGCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSLIGLL*LGGASP
Trigger: TGGACTTGCCCCTCCTAAGCAGAGAAGGCCTATGAG...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGATATCCTGCCCAACTTaGTTCTTTCCCCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKISCPT*FFPHSS
Trigger: GGAGGAATGGGGAAAGAAGCAAGTTGGGCAGGATAT...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACAACCCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QFVDRVFRGYHHLSIPFGQPRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGTTG...TCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCACTCCTTCTGACATaGCTCCGGAAGGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFPLLLT*LRKEDR
Trigger: GCGATCTTCCTTCCGGAGCCATGTCAGAAGGAGTGG...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: DRVFRGYHHLSIPFGLAILNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...AATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp GCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: AGLTSTFSPLRTFPGRSSLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...GGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp CTAAGAGCTGGTTATTGCAAGAGGTACCCAAGCACTAAGCAGCAGAGGGTGGTACTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: LRAGYCKRYPSTKQQRVVLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...TACCACCCTCTGCTGCTTAGTGCTTGGGTACCTCTTGCAATAACCAGCTCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SNNLWTEFSEATTTSAYPQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...AGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp AATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NLWTEFSEATTTSAYPLDQGSCC*AWEMAP
Trigger: AGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTG...GTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TTTGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FGGKGRGWGGLRPLVLIKSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...CTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp AGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCAAGGTATTCCCCCTCTTaGGACTCGGACACACTCACG +
Preference number: 4 (lower is better)
Translates to: RSSNNLWTEFSEATTTSARYSPS*DSDTLT
Trigger: CGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCT...TGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR CCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTCACTGTAGCGTTTGGTaGGGGGAAGAAGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSHCSVW*GEEGWI
Trigger: AATCCAGCCTTCTTCCCCCCACCAAACGCTACAGTG...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCATGTAAGTATCTGGTaGAGGCCCCACTGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGHVSIW*RPHCSV
Trigger: AACGCTACAGTGGGGCCTCCACCAGATACTTACATG...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGCATGTAAGTATCTGGTaGAGGCCCCACTGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVHVSIW*RPHCSV
Trigger: AACGCTACAGTGGGGCCTCCACCAGATACTTACATG...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACATGTAAGTATCTGGTaGAGGCCCCACTGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGHVSIW*RPHCSV
Trigger: AACGCTACAGTGGGGCCTCCACCAGATACTTACATG...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTTCATGTAAGTATCTaGTGGAGGCCCCACTGTAGC +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGLHVSI*WRPHCS
Trigger: GCTACAGTGGGGCCTCCACCAGATACTTACATGAAG...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCTGGAAATGGCACTGCTaGAAATTGCTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTAWKWHC*KLLCFA
Trigger: AGCGAAACAGAGCAATTTCCAGCAGTGCCATTTCCA...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCCTCCAGATACTGCTTTaGAAATGGCACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: VFRFFPLANRRCGIGRTALQILL*KWHCWK
Trigger: TTTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAG...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp AAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCACACTGTAGGACTTaGCTTCGATGCCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: KSLGSFPWQTGGVGLGGLPHCRT*LRCHED
Trigger: GTCTTCATGGCATCGAAGCCAAGTCCTACAGTGTGG...CAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp GTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAGTTATTCCCTGGGTGTCTaGAGGGAGTTAGGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: VPMSPSPNGQYLPLKQGSYSLGV*RELGVW
Trigger: CCAAACCCCTAACTCCCTCCAGACACCCAGGGAATA...ACTTCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGAGGATCTATTTTCTTTaGGAAGGAAGTCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: WEDCQAVFNPVGQRVFPGRIYFL*EGSLPI
Trigger: GATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCT...CCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAGTCCCCATCTCCCAATaGGCAGTACCTTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGVPISQ*AVPSSK
Trigger: TTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGAC...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGGATTTCCCCATTCCTCCTaGTTACTTCACAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: RRTSLLPPPSAATTLQFGFPHSS*LLHKGS
Trigger: AGAACCCTTGTGAAGTAACCAGGAGGAATGGGGAAA...TCCAAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAGTCTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCGT +
Preference number: 4 (lower is better)
Translates to: VPMSPSPNGQYLPLKQGSLESRE*ARGGIR
Trigger: ACGAATACCTCCACGGGCCCATTCCCGAGATTCTAG...ACTTCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439958.8
CDS-3UTR TCA 90 bp GAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGTTTAGTCCAATTCAGACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: EGYMRNVLGTEDGFSPIQTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...CTGAATTGGACTAAACCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTTTGGCTTCGATGCCATaGAGACAGTCCTTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGLASMP*RQSLRE
Trigger: CTCTCTTAAGGACTGTCTTCATGGCATCGAAGCCAA...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTGAGGGGCAAGTCCACTaGGAAGGCTGGGCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTEGQVH*EGWAAQ
Trigger: CTGCGCTGCCCAGCCTTCTCAGTGGACTTGCCCCTC...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGCTTAGAACTCTGAGCTaGGTTCATTCAAGTCGGGCT +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVLRTLS*VHSSRA
Trigger: AGCCCGACTTGAATGAACTCAGCTCAGAGTTCTAAG...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CTTGGACAAAGCACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCGACTCCCTCAGTGACTaGGGGCTATATGAGAAACGT +
Preference number: 4 (lower is better)
Translates to: LGQSTILYGDQGPGHVFFDSLSD*GLYEKR
Trigger: ACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGTC...GAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTTTGTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: YFLWEGSLPINLTIERLPEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...CGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: ISCWSVVHIITGPSNDHQEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...TTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCAGCAGCTGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR GCA 90 bp GGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: GVPTICGQSFQRLPPPQHEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...ATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp ATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCAGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: IIDSYRANNLDQLLVCGPEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...TGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR GCA 90 bp ATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: ICGQSFQRLPPPQHTLWTEEVVQ*CCFCHL
Trigger: CAGATGACAGAAGCAGCAGCACTGAACCACCTCCTC...AGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp GGCTTATCCACACGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: GLSTRADEGTRFSEGVARICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...ACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGATAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR GCA 90 bp TTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGAACTGTGACAGGTTCTaGCGGGTGGCCGGCCTCACG +
Preference number: 4 (lower is better)
Translates to: LRTFPGRSSNNLWTEFSENCDRF*RVAGLT
Trigger: CGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT...CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR GCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGCTTTGGAAATGGCACTaGTGGAAATTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGLWKWH*WKLLCF
Trigger: GAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAG...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GCAGGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATGCTTTGGAAATGGCACTaGTGGAAATTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: AGPWAYFGTPSHSPRSCMLWKWH*WKLLCF
Trigger: GAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAG...CATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTACTGGCTCCAGATACTaGTTTGGAAATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCTGSRY*FGNGTA
Trigger: AGCAGTGCCATTTCCAAAGCAGTATCTGGAGCCAGT...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGTGTTTTCTTCCTGTCTaGCACCCCTCCCAATCACAC +
Preference number: 4 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKCFLPV*HPSQSH
Trigger: GTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAACA...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCTGTTTTCTTCCTGTCTaGCACCCCTCCCAATCACAC +
Preference number: 4 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPCFLPV*HPSQSH
Trigger: GTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAACA...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp CACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCTGTCTGCCACCTAAGAGCTGGTTATTaGAAGAGGTACCCAAGCACT +
Preference number: 4 (lower is better)
Translates to: HHSLWRPGAWTCFLPVCHLRAGY*KRYPST
Trigger: AGTGCTTGGGTACCTCTTGCAATAACCAGCTCTTAG...GTGGCAGACAGGAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTATATCCTGCCCAACTTaGTTCTTTCCCCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGISCPT*FFPHSS
Trigger: GGAGGAATGGGGAAAGAAGCAAGTTGGGCAGGATAT...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CTTGGACAAAGCACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCTGCCCTGTAGATGCATaGAGAAGTAGCATCACCCCA +
Preference number: 4 (lower is better)
Translates to: LGQSTILYGDQGPGHVFFCPVDA*RSSITP
Trigger: TGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA...GAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTTTGTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCTGGTCCATTAATCATTaGTTTCTTCGGCACCAGTAC +
Preference number: 4 (lower is better)
Translates to: TRTHSRFRACASNCDRFCWSINH*FLRHQY
Trigger: GTACTGGTGCCGAAGAAAGCAATGATTAATGGACCA...GCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR CCA 90 bp GTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAGTTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: VPMSPSPNGQYLPLKQGSLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...ACTTCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp TGCTGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGTTCCTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: CWSVVHIITGPSNDHQEFLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...GAACTCTTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR CCA 90 bp AATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACCTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: NLWTEFSEATTTSAYPLDLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...GTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp ATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCATCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: IIDSYRANNLDQLLVCGPSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...TGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp TCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAA +
Preference number: 4 (lower is better)
Translates to: SNNLWTEFSEATTTSAYPSCCWA*EMAPGE
Trigger: TTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGA...AGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp CCTGGATCAGCTGCTGGTCTGTGGTCCATTAATCATTGCTTTCTTCGGCACCAGATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PGSAAGLWSINHCFLRHQIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...CTGGTGCCGAAGAAAGCAATGATTAATGGACCACAGACCAGCAGCTGATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp AGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCCC +
Preference number: 4 (lower is better)
Translates to: SSNNLWTEFSEATTTSAYLESRE*ARGGIP
Trigger: GGGAATACCTCCACGGGCCCATTCCCGAGATTCTAG...GTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR CCA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCATGTAAGTATCTGGTaGAGGCCCCACTGTAGCGTT +
Preference number: 4 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPHVSIW*RPHCSV
Trigger: AACGCTACAGTGGGGCCTCCACCAGATACTTACATG...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACACTCACTGTAGAGGGTaGAGGGCCCGAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNTHCRG*RARISA
Trigger: AGCCGAGATTCGGGCCCTCCACCCTCTACAGTGAGT...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACTCCCTCAGTGACTGAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGCTCCTAGATCCTGCATaGAGGATCTATTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TPSVTEGYMRNVLGTEDGLLDPA*RIYFLW
Trigger: CCAAAGAAAATAGATCCTCCATGCAGGATCTAGGAG...CCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTCAGTCACTGAGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TGCATGGAGGATCTATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATCTGAGGGCAGGACCCTaGGCATATTTTGGCACACCC +
Preference number: 4 (lower is better)
Translates to: CMEDLFSLGRKSSHQPHHLRAGP*AYFGTP
Trigger: GGGTGTGCCAAAATATGCCCAGGGTCCTGCCCTCAG...ATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCTCCATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CAAAGAAGTGGTATGTTAGCAAGGGGTTTGGACCCTCTTGGCCCCATTAAATCTTGCCATGTTCTGAAGTaGAGGTGGGGATGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QRSGMLARGLDPLGPIKSCHVLK*RWGWGW
Trigger: CCAACCCCATCCCCACCTCCACTTCAGAACATGGCA...AGATTTAATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACATACCACTTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTTCGGGAATGGGCCCGTaGAGGTATTCGTTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: RTFPGRSSNNLWTEFSEASGMGP*RYSFPS
Trigger: GCTCGGAAACGAATACCTCCACGGGCCCATTCCCGA...AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
3UTR CAA 72 bp AACGGCTCCCGGAGAATCAGAAACTCATACGTTTTCTaGGACAAAGCACCATTCTCTATGGAGACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NGSRRIRNSYVF*DKAPFSMETRG
Trigger: GCCCCTGGTCTCCATAGAGAATGGTGCTTTGTCCAAGAAAACGTATGAGTTTCTGATTCTCCGGGAGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCCATCAGCAGAATCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: RADEGTRFSEGVARPSAESYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...TTCTGCTGATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR TCA 90 bp GTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTCTGTTTCGCTTCATaGTATCTTCAAATTCGGCTT +
Preference number: 4 (lower is better)
Translates to: VVIGSARLPSSKQPHRPSLCFAS*YLQIRL
Trigger: AAGCCGAATTTGAAGATATCATGAAGCGAAACAGAG...AGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp GTGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCTCTGTTTCGCTTCATaGTATCTTCAAATTCGGCTT +
Preference number: 4 (lower is better)
Translates to: VGLGGLPSSLQSCGAEGILCFAS*YLQIRL
Trigger: AAGCCGAATTTGAAGATATCATGAAGCGAAACAGAG...AATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp AGAAGGGTCTCTAGTGACCCTATGTCTCACATGCCAAGTCTCATCTCACATGCCTTGGCTTCGATGCCATaGAGACAGTCCTTAAGAGAG +
Preference number: 4 (lower is better)
Translates to: RRVSSDPMSHMPSLISHALASMP*RQSLRE
Trigger: CTCTCTTAAGGACTGTCTTCATGGCATCGAAGCCAA...GGCATGTGAGATGAGACTTGGCATGTGAGACATAGGGTCACTAGAGACCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TATATGAGAAACGTGCTGGGAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCAGGGTTCTTCATTGCTaGGGTCCCAATGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: YMRNVLGTEDGFSPIQSLRVLHC*GPNVPI
Trigger: GATGGGGACATTGGGACCTCAGCAATGAAGAACCCT...GAGAGACTGAATTGGACTAAACCCGTCCTCTGTTCCCAGCACGTTTCTCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGTCAACAGTCAAAAGGTaGAAAGACACCAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWSTVKR*KDTKFV
Trigger: CACAAATTTGGTGTCTTTTCACCTTTTGACTGTTGA...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: NNLWTEFSEATTTSAYPLEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...CAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp CAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: QSFQRLPPPQHTLWTGHLVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...CAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp GTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: VVIGSARLPSSKQPHRPSICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...AGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTGGCACTGCTGGAAATTaGTCTGTTTCGCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGGTAGN*SVSLHD
Trigger: ATCATGAAGCGAAACAGAGCAATTTCCAGCAGTGCC...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGACTGGCTCCAGATACTaGTTTGGAAATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKTGSRY*FGNGTA
Trigger: AGCAGTGCCATTTCCAAAGCAGTATCTGGAGCCAGT...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGATATCCTGCCCAACTTaGTTCTTTCCCCATTCCTCC +
Preference number: 4 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKISCPT*FFPHSS
Trigger: GGAGGAATGGGGAAAGAAGCAAGTTGGGCAGGATAT...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTACCGCAGGACCTCGCTaGTGCCTCCTCCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTTAGPR*CLLLQQ
Trigger: CTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGT...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGAATGTTAGGTGTCAGATaGCCTGTAGATGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGMLGVR*PVDACR
Trigger: TCTGCATGCATCTACAGGGCATCTGACACCTAACAT...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTATGTTAGGTGTCAGATaGCCTGTAGATGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCMLGVR*PVDACR
Trigger: TCTGCATGCATCTACAGGGCATCTGACACCTAACAT...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp AGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTCATACCTGGATCAGCTaGTGGTCTGTGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: RTFPGRSSNNLWTEFSEAHTWIS*WSVVHQ
Trigger: CTGGTGGACCACAGACCAGCAGCTGATCCAGGTATG...AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544990.5
CDS-3UTR CCA 90 bp TGCATGGAGGATCTATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATCCACTCCTTCTGACATaGCTCCGGAAGGAAGATCGC +
Preference number: 4 (lower is better)
Translates to: CMEDLFSLGRKSSHQPHHPLLLT*LRKEDR
Trigger: GCGATCTTCCTTCCGGAGCCATGTCAGAAGGAGTGG...ATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCTCCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCTTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: EFSEATTTSAYPLDWPFACIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...AGCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp GCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: AGLTSTFSPLRTFPGRSSCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...GGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: VAGLTSTFSPLRTFPGRSCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...ACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp AGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: SSNNLWTEFSEATTTSAYLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...GTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp TTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGGTTGGGCTTGGGAGATaGCTCCTGGCGAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: FSPLRTFPGRSSNNLWTEVGLGR*LLANRR
Trigger: CCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAAC...CTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CTCCACCACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LHHIIDSYRANNLDQLLVIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...GACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTGGTGGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CTCCACCACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: LHHIIDSYRANNLDQLLVAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...GACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTGGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp ATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTCGTTTCCGAGCCTGTGCAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: ITRISGMGPWRYSFPSLCSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...GCACAGGCTCGGAAACGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp TGCATGGAGGATCTATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATGGTTCTCAGAGGGTGTaGCCCGTCCATCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: CMEDLFSLGRKSSHQPHHGSQRV*PVHQQN
Trigger: ATTCTGCTGATGGACGGGCCACACCCTCTGAGAACC...ATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCTCCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTGGTTCTCAGAGGGTGTaGCCCGTCCATCAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: RTFPGRSSNNLWTEFSEAGSQRV*PVHQQN
Trigger: ATTCTGCTGATGGACGGGCCACACCCTCTGAGAACC...AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGGAGAATCAGAAACTCCTCCAGATACTGCTTTaGAAATGGCACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GSLPINLTIERLPENQKLLQILL*KWHCWK
Trigger: TTTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAG...GAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGATTTCCCCATTCCTCCTaGTTACTTCACAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGFPHSS*LLHKGS
Trigger: AGAACCCTTGTGAAGTAACCAGGAGGAATGGGGAAA...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTTTTCCCCATTCCTCCTaGTTACTTCACAAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: EQRTGLVQFSLSPLTQKGFPHSS*LLHKGS
Trigger: AGAACCCTTGTGAAGTAACCAGGAGGAATGGGGAAA...ACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTCCTCTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTGGATCAGCTGCTaGTCTGTGGTCCACATTATC +
Preference number: 4 (lower is better)
Translates to: FPGRSSNNLWTEFSEATTTWISC*SVVHII
Trigger: GATAATGTGGACCACAGACCAGCAGCTGATCCAGGT...GGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CCA 90 bp ATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCAACCTGGATCAGCTGCTaGTCTGTGGTCCACATTATC +
Preference number: 4 (lower is better)
Translates to: IIDSYRANNLDQLLVCGPTWISC*SVVHII
Trigger: GATAATGTGGACCACAGACCAGCAGCTGATCCAGGT...TGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR TCA 90 bp TGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCTCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: WDWEDCQAVFNPVGQRVFSYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...GAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp TGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGATCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: CDRFCRVAGLTSTFSPLRSYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...TCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR TCA 90 bp CACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCTGTCTGCCACCTCTGTTTCGCTTCATaGTATCTTCAAATTCGGCTT +
Preference number: 4 (lower is better)
Translates to: HHSLWRPGAWTCFLPVCHLCFAS*YLQIRL
Trigger: AAGCCGAATTTGAAGATATCATGAAGCGAAACAGAG...GTGGCAGACAGGAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACTGCCGATCTTCATTATaGAGCAGATCCCGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNCRSSL*SRSRCL
Trigger: GAGGCACCGGGATCTGCTTCATAATGAAGATCGGCA...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGAAGACACCAAATTTGTaGCTTTACCTGCCTACTAGT +
Preference number: 4 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVKTPNL*LYLPTS
Trigger: ACTAGTAGGCAGGTAAAGTCACAAATTTGGTGTCTT...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCTATCTCCAGGCAGAGTaGGAGGAGCTATTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPYLQAE*EELLSQ
Trigger: TTGACTTAATAGCTCCTCTCACTCTGCCTGGAGATA...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTTGGTCCTTAGAACTCTaGGCTGAGTTCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSWSLEL*AEFIQV
Trigger: GACTTGAATGAACTCAGCTCAGAGTTCTAAGGACCA...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGTTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACGAGCAGCGTCTCAATTaGGTCACTGTAATCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNEQRLN*VTVIPC
Trigger: GCAGGGGATTACAGTGACGCAATTGAGACGCTGCTC...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GAGGGCTATATGAGAAACGTGCTGGGAACAGAGGACGGGTTTAGTCCAATTCAGCTAAGAGCTGGTTATTaGAAGAGGTACCCAAGCACT +
Preference number: 4 (lower is better)
Translates to: EGYMRNVLGTEDGFSPIQLRAGY*KRYPST
Trigger: AGTGCTTGGGTACCTCTTGCAATAACCAGCTCTTAG...CTGAATTGGACTAAACCCGTCCTCTGTTCCCAGCACGTTTCTCATATAGCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGGACCCCAGGAGAAGCTaGCCACATAAACGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FSPLRTFPGRSSNNLWTEDPRRS*PHKRQL
Trigger: GAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGGTC...CTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR GCA 90 bp TATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGATAACCTGGATCAGCTaGTGGTCTGTGGTCCACATT +
Preference number: 4 (lower is better)
Translates to: YRANNLDQLLVCGPHYHRITWIS*WSVVHI
Trigger: AATGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...CCTGTGATAATGTGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR GCA 90 bp CAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGTGGTCCATTAATCATTaGTTTCTTCGGCACCAGTAC +
Preference number: 4 (lower is better)
Translates to: QSFQRLPPPQHTLWTGHLWSINH*FLRHQY
Trigger: GTACTGGTGCCGAAGAAAGCAATGATTAATGGACCA...CAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp AGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACTTGAACTCTGGGTCCTaGTTGAACTCCTCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSNNLWTEFSEATTTSAYLNSGS*LNSSSA
Trigger: TGCTGACGAGGAGTTCAACCAGGACCCAGAGTTCAA...GTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp CTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTATAGAGCGAATAACCTaGATCAGCTGCTGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LVGVPTICGQSFQRLPPPIERIT*ISCWSV
Trigger: CACAGACCAGCAGCTGATCCAGGTTATTCGCTCTAT...AGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp ATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCAGCATACCCTTTGGACTaGCCATTTGCTCGATTCTCT +
Preference number: 4 (lower is better)
Translates to: IIDSYRANNLDQLLVCGPAYPLD*PFARFS
Trigger: AGAGAATCGAGCAAATGGCCAGTCCAAAGGGTATGC...TGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp GGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GQSFQRLPPPQHTLWTGHSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...ATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp CGTCCATCAGCAGAATCACTAGAATCTCGGGAATGGGCCCGTGGAGGTATTCGTAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RPSAESLESREWARGGIRSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...ACGAATACCTCCACGGGCCCATTCCCGAGATTCTAGTGATTCTGCTGATGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp GTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAGTTGGAAATGGCACTGCTaGAAATTGCTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: VPMSPSPNGQYLPLKQGSWKWHC*KLLCFA
Trigger: AGCGAAACAGAGCAATTTCCAGCAGTGCCATTTCCA...ACTTCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ATGGAAAAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCACACTGTAGGACTTaGCTTCGATGCCATGAAGAC +
Preference number: 4 (lower is better)
Translates to: MEKPQGKGTTKSWLLQEVPHCRT*LRCHED
Trigger: GTCTTCATGGCATCGAAGCCAAGTCCTACAGTGTGG...TACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGACTCCTAGATCCTGCATaGAGGATCTATTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGLLDPA*RIYFLW
Trigger: CCAAAGAAAATAGATCCTCCATGCAGGATCTAGGAG...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAAGAGTTCAGCCCTCTaGGAGGTCAAAGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGKSSAL*EVKEIN
Trigger: GTTTATTTCTTTGACCTCCCAGAGGGCTGAACTCTT...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTTCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFSYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTTGGGCAGCGCAGAGTTaGAAGAGTTCAGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTWAAQS*KSSALW
Trigger: CCAGAGGGCTGAACTCTTTCAACTCTGCGCTGCCCA...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTCAACAGTCAAAAGGTaGAAAGACACCAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRSTVKR*KDTKFV
Trigger: CACAAATTTGGTGTCTTTTCACCTTTTGACTGTTGA...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: HIIDSYRANNLDQLLVCGVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...ACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR GCA 90 bp GGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GVPTICGQSFQRLPPPQHVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...ATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp ACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: TPPNHTKSLGSFPWQTGGICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...ACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTTTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp TGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGTTCAAGATAACCTGGATCAGCTaGTGGTCTGTGGTCCACATT +
Preference number: 4 (lower is better)
Translates to: WSVVHIITGPSNDHQEFKITWIS*WSVVHI
Trigger: AATGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...CTTGAACTCTTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR CCA 90 bp CACCACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: HHIIDSYRANNLDQLLVCCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...ACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTGGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp AACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGTACTGAGGGCTGTGAGGTaGCTGTCAGCACATCATCAT +
Preference number: 4 (lower is better)
Translates to: NRQYVRGKAGTEVAFHKVLRAVR*LSAHHH
Trigger: ATGATGATGTGCTGACAGCCACCTCACAGCCCTCAG...TACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GACGGGTTTAGTCCAATTCAGTCTCTCTCCTCTGACCCAGAAGGGTCTCTAGTGAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: DGFSPIQSLSSDPEGSLVSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...CACTAGAGACCCTTCTGGGTCAGAGGAGAGAGACTGAATTGGACTAAACCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTAGTAGGGCAGCACACTaGGGGGCTTATCCACACGAG +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTSRAAH*GAYPHE
Trigger: CTCGTGTGGATAAGCCCCCCAGTGTGCTGCCCTACT...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCTGGAAATGGCACTGCTaGAAATTGCTCTGTTTCGCT +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFWKWHC*KLLCFA
Trigger: AGCGAAACAGAGCAATTTCCAGCAGTGCCATTTCCA...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CCA 90 bp CTAAGAGCTGGTTATTGCAAGAGGTACCCAAGCACTAAGCAGCAGAGGGTGGTAAAGAGTTCAGCCCTCTaGGAGGTCAAAGAAATAAAC +
Preference number: 4 (lower is better)
Translates to: LRAGYCKRYPSTKQQRVVKSSAL*EVKEIN
Trigger: GTTTATTTCTTTGACCTCCCAGAGGGCTGAACTCTT...TACCACCCTCTGCTGCTTAGTGCTTGGGTACCTCTTGCAATAACCAGCTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGTAACATCACTTAACACTTaGCCAGTTGGGTGGGGTGCC +
Preference number: 4 (lower is better)
Translates to: NRQYVRGKAGTEVAFHKVTSLNT*PVGWGA
Trigger: GGCACCCCACCCAACTGGCCAAGTGTTAAGTGATGT...TACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTATCAGCTGCTGGTCTGTaGTCCACATTATCACAGGAC +
Preference number: 4 (lower is better)
Translates to: ELSLVGVPTICGQSFQRLSAAGL*STLSQD
Trigger: GTCCTGTGATAATGTGGACCACAGACCAGCAGCTGA...TAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CCA 90 bp ACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTTCAGCTGCTGGTCTGTaGTCCATTAATCATTGCTTT +
Preference number: 4 (lower is better)
Translates to: TEFSEATTTSAYPLDWPFSAAGL*SINHCF
Trigger: AAAGCAATGATTAATGGACCACAGACCAGCAGCTGA...AAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
3UTR CAA 72 bp TTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATaGAACGGCTCCCGGAGAATCAGAAACTCATACGTT +
Preference number: 4 (lower is better)
Translates to: FFGKEVFPSTSP*NGSRRIRNSYV
Trigger: AACGTATGAGTTTCTGATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTCAAGTCCACTCCTTCTaGCATGGCTCCGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTQVHSF*HGSGRK
Trigger: CTTCCTTCCGGAGCCATGTCAGAAGGAGTGGACTTG...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTTCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCSYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR TCA 90 bp ATGGAAAAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTATGGTCCTTAGAACTCTaGGCTGAGTTCATTCAAGTC +
Preference number: 4 (lower is better)
Translates to: MEKPQGKGTTKSWLLQEVWSLEL*AEFIQV
Trigger: GACTTGAATGAACTCAGCTCAGAGTTCTAAGGACCA...TACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGATAACCTGGATCAGCTaGTGGTCTGTGGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: INRQYVRGKAGTEVAFHKITWIS*WSVVHQ
Trigger: CTGGTGGACCACAGACCAGCAGCTGATCCAGGTTAT...CTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CTCCACCACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LHHIIDSYRANNLDQLLVICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...GACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTGGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CCA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGAAGCACCATTCTCTATaGAGACCAGGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: INRQYVRGKAGTEVAFHKKHHSL*RPGAWT
Trigger: TGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTT...CTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCTCCTAGATCCTGCATaGAGGATCTATTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFLLDPA*RIYFLW
Trigger: CCAAAGAAAATAGATCCTCCATGCAGGATCTAGGAG...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CAAAGAAGTGGTATGTTAGCAAGGGGTTTGGACCCTCTTGGCCCCATTAAATCTCCCTCCTCAAAGGGCTaGAAAGGTAAAGGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: QRSGMLARGLDPLGPIKSPSSKG*KGKGVK
Trigger: TTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGG...AGATTTAATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACATACCACTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TGCATGGAGGATCTATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATGCTCCATGTGTTAAATaGAAAAGCCCCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: CMEDLFSLGRKSSHQPHHAPCVK*KSPRER
Trigger: CCTTTCCCTGGGGCTTTTCCATTTAACACATGGAGC...ATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCTCCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGCTAGAATCTCGGGAATaGGCCCGTGGAGGTATTCGT +
Preference number: 4 (lower is better)
Translates to: TSTFSPLRTFPGRSSNNLLESRE*ARGGIR
Trigger: ACGAATACCTCCACGGGCCCATTCCCGAGATTCTAG...CAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CCA 90 bp AATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTCAGCTGCTGGTCTGTaGTCCATTAATCATTGCTTT +
Preference number: 4 (lower is better)
Translates to: NLWTEFSEATTTSAYPLDSAAGL*SINHCF
Trigger: AAAGCAATGATTAATGGACCACAGACCAGCAGCTGA...GTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
3UTR CAA 72 bp CCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAGGCTACCACCACCTCA +
Preference number: 4 (lower is better)
Translates to: PLRTFPGRSSNN*WTEFSEATTTS
Trigger: TGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR TCA 90 bp TCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTACTCTGGGTCCTGGTTaGACTCCTCGTCAGCATATA +
Preference number: 4 (lower is better)
Translates to: SPLRTFPGRSSNNLWTEFTLGPG*TPRQHI
Trigger: TATATGCTGACGAGGAGTTCAACCAGGACCCAGAGT...AAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR TCA 90 bp ACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTTCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: TEFSEATTTSAYPLDWPFSYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...AAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR TCA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACTATCTCCAGGCAGAGTaGGAGGAGCTATTAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNYLQAE*EELLSQ
Trigger: TTGACTTAATAGCTCCTCTCACTCTGCCTGGAGATA...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTEVVQC*CFCHLR
Trigger: CCTCAGATGACAGAAGCAGCAGCACTGAACCACCTC...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp TATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: YFLWEGSLPINLTIERLPICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...CGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR GCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp TGCTGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGTTCATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: CWSVVHIITGPSNDHQEFICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...GAACTCTTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR GCA 90 bp ATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCAATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: IIDSYRANNLDQLLVCGPICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...TGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR GCA 90 bp GGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATATTTGCTCGATTCTCTaGAAATTTCAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: GVPTICGQSFQRLPPPQHICSIL*KFQLHH
Trigger: GTGGTGGAGTTGAAATTTGCAGAGAATCGAGCAAAT...ATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCTTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR GCA 90 bp ATCAGCTGCTGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAATTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: ISCWSVVHIITGPSNDHQFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...TTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCAGCAGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR GCA 90 bp CCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: PTICGQSFQRLPPPQHTLFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...AAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTGAGCAGCGTCTCAATTaGGTCACTGTAATCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTEQRLN*VTVIPC
Trigger: GCAGGGGATTACAGTGACGCAATTGAGACGCTGCTC...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTTGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: RTFPGRSSNNLWTEFSEACIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp CTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVGVPTICGQSFQRLPPPSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...AGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CCA 90 bp ATAAACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGTTAGGTTCTTTCCCCTaGCAAACAGGAGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: INRQYVRGKAGTEVAFHKLGSFP*QTGGVG
Trigger: TCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAA...CTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTAAGCACCATTCTCTATaGAGACCAGGGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTKHHSL*RPGAWT
Trigger: TGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTT...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCAGGATCTATTTTCTTTaGGAAGGAAGTCTTCCCATC +
Preference number: 4 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFRIYFL*EGSLPI
Trigger: GATGGGAAGACTTCCTTCCCAAAGAAAATAGATCCT...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp TATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGTCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: YFLWEGSLPINLTIERLPSYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...CGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR TCA 90 bp CCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCACATTATCACATCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: PIERITWISCWSVVHIITSYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...TGTGATAATGTGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR GCA 90 bp TGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGTTCAAGTTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: WSVVHIITGPSNDHQEFKFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...CTTGAACTCTTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR GCA 90 bp AACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGTTTGGACTGGCCATTTaGTCGATTCTCTGCAAATTT +
Preference number: 4 (lower is better)
Translates to: NNLWTEFSEATTTSAYPLFGLAI*SILCKF
Trigger: AAATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAA...CAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACCTTTGGAAATGGCACTaGTGGAAATTGCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNLWKWH*WKLLCF
Trigger: GAAACAGAGCAATTTCCAGCAGTGCCATTTCCAAAG...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp TATATGAGAAACGTGCTGGGAACAGAGGACGGGTTTAGTCCAATTCAGTCTCTCAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: YMRNVLGTEDGFSPIQSLSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...GAGAGACTGAATTGGACTAAACCCGTCCTCTGTTCCCAGCACGTTTCTCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp AGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSNNLWTEFSEATTTSAYSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...GTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR TCA 90 bp CAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTTCATACAGGTCAATCTaGTCTGTATTGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: QQFVDRVFRGYHHLSIPFSYRSI*SVLLNS
Trigger: AGAGTTCAACAATACAGATCAGATTGACCTGTATGA...AAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR GCA 90 bp TTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGGTAGGTATACAGAATTaGAGGGGTCTTGTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FSPLRTFPGRSSNNLWTEVGIQN*RGLVVG
Trigger: CCCAACAACAAGACCCCTGCAATTCTGTATACCTAC...CTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CCA 90 bp CCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCATGTATTGTTGAACTCTaGGTCCTGGTTGAACTCCTC +
Preference number: 4 (lower is better)
Translates to: PLRTFPGRSSNNLWTEFSCIVEL*VLVELL
Trigger: GAGGAGTTCAACCAGGACCCAGAGTTCAACAATACA...TGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR TCA 90 bp AACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGTAAAGACACCAAATTTGTaGCTTTACCTGCCTACTAGT +
Preference number: 4 (lower is better)
Translates to: NRQYVRGKAGTEVAFHKVKTPNL*LYLPTS
Trigger: ACTAGTAGGCAGGTAAAGTCACAAATTTGGTGTCTT...TACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTCTCCAGATACTGCTTTaGAAATGGCACTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LHFKRHPELLSISTSLNTLQILL*KWHCWK
Trigger: TTTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAG...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CCA 90 bp ACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: TFSPLRTFPGRSSNNLWTSSNNL*TEFSEA
Trigger: AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT...TGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS GCA 90 bp CAAAGTAAGGAAGATGCCACGCTCTCCCAGGCCGCCGGGGGTCGCTaGCCATCACCCTCGGGCCCGACCCGGGTAGCGCCGCGTCTGCGC +
Preference number: 5 (lower is better)
Translates to: QSKEDATLSQAAGGR*PSPSGPTRVAPRLR
Trigger: GCGCAGACGCGGCGCTACCCGGGTCGGGCCCGAGGGTGATGGGCAGCGACCCCCGGCGGCCTGGGAGAGCGTGGCATCTTCCTTACTTTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413184.6
ENST00000489728.1
CDS TCA 90 bp AAGCAGATCCCGGTGCCTCCTGCTGCTCTCCCGGGACCGGCTAGGTaGCCTTTCCCGGGAGCGATGTCTTTTCCTGGAAGAGCTCCCACT +
Preference number: 5 (lower is better)
Translates to: KQIPVPPAALPGPAR*PFPGAMSFPGRAPT
Trigger: AGTGGGAGCTCTTCCAGGAAAAGACATCGCTCCCGGGAAAGGTCACCTAGCCGGTCCCGGGAGAGCAGCAGGAGGCACCGGGATCTGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000477890.6
ENST00000537641.5
CDS-3UTR CAA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGGCAGGGGTCTTGTTGTaGGGCTTGGGAGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMAGVLL*GLGDGS
Trigger: GGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGC...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp AGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGGGACCCCAAAGCTaGAGGAGAGAGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RKGKGVGRPPSFSPDQGEEGPQS*RREVVG
Trigger: CCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCTC...CTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCGGCAACGCTCATCATaGGCAACCCGGGACTGTTTG +
Preference number: 5 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMRQRSS*ATRDCL
Trigger: CAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCG...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS GCA 90 bp TGGGCTTGGGAGATGGCTCCTGGCGAACAGGAGGAGGTGGTTCAGTaGTGCTGCTTCTGTCATCTGAGGGCTGTGAGGTGGCTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: WAWEMAPGEQEEVVQ*CCFCHLRAVRWLSA
Trigger: TGCTGACAGCCACCTCACAGCCCTCAGATGACAGAAGCAGCAGCACTGAACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS GCA 90 bp GCTTGGGAGATGGCTCCTGGCGAACAGGAGGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGGGCTGTGAGGTGGCTGTCAGCACAT +
Preference number: 5 (lower is better)
Translates to: AWEMAPGEQEEVVQC*CFCHLRAVRWLSAH
Trigger: ATGTGCTGACAGCCACCTCACAGCCCTCAGATGACAGAAGCAGCAGCACTGAACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS-3UTR CAA 90 bp ACTCACGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: THVSEPVPQTVTGSAGWPIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...CGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGTGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CAA 90 bp AGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCGAGGTATTCCCCCTCTaGGGACTCGGACACACTCAC +
Preference number: 5 (lower is better)
Translates to: RYSPSWDSDTLTFPSLCLEVFPL*GLGHTH
Trigger: GTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTC...GAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS GCA 90 bp TGGGAGATGGCTCCTGGCGAACAGGAGGAGGTGGTTCAGTGCTGCTaGTTCTGTCATCTGAGGGCTGTGAGGTGGCTGTCAGCACATCAT +
Preference number: 5 (lower is better)
Translates to: WEMAPGEQEEVVQCC*FCHLRAVRWLSAHH
Trigger: ATGATGTGCTGACAGCCACCTCACAGCCCTCAGATGACAGAAGCAGCAGCACTGAACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS-3UTR CAA 90 bp TGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: WEDCQAVFNPVGQRVFPGIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...CCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp ATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: IRFRACASNCDRFCRVAGTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...GCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CAA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGGCTCCAGATACTGCTTaGGAAATGGCACTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMAPDTA*EMALLE
Trigger: TTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAGC...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGCAACCCGGGACTGTTaGATAACCGCAATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQATRDC*ITAMAV
Trigger: CACAGCCATTGCGGTTATCAAACAGTCCCGGGTTGC...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTCGGCAACGCTCATCATaGGCAACCCGGGACTGTTTG +
Preference number: 5 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPRQRSS*ATRDCL
Trigger: CAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCG...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCCGGCAACGCTCATCATaGGCAACCCGGGACTGTTTG +
Preference number: 5 (lower is better)
Translates to: CPVDACRSSITPWVPQDLRQRSS*ATRDCL
Trigger: CAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCG...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGCGGCAACGCTCATCATaGGCAACCCGGGACTGTTTG +
Preference number: 5 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWRQRSS*ATRDCL
Trigger: CAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCG...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGGGGTTTGGACCCTCTaGGCCCCATTAAATCTAGTG +
Preference number: 5 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGGVWTL*APLNLV
Trigger: CACTAGATTTAATGGGGCCAAGAGGGTCCAAACCCC...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTTTAACACTTGGCCAGTaGGGTGGGGTGCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGLTLGQ*GGVPCS
Trigger: AGAACATGGCACCCCACCCAACTGGCCAAGTGTTAA...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS CCA 90 bp GGCCACTGTAGGTATACAGAATTGCAGGGGTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAACAGGAGGAGGTGGTTCAGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GHCRYTELQGSCCWA*EMAPGEQEEVVQCC
Trigger: GCAGCACTGAACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGCAATTCTGTATACCTACAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS-3UTR CAA 90 bp CACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGGCAGGGGTCTTGTTGTaGGGCTTGGGAGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: HPSQSHEVFRFFPLANRRAGVLL*GLGDGS
Trigger: GGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGC...CCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp TCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCAATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: SNCDRFCRVAGLTSTFSPIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...TGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CAA 90 bp TCCACACGAGCAGATGAGGGTACAAGGTTCTCAGAGGGTGTGGCCCGTCCATCAATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: STRADEGTRFSEGVARPSIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...TGATGGACGGGCCACACCCTCTGAGAACCTTGTACCCTCATCTGCTCGTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CAA 90 bp GTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTGAGGTATTCCCCCTCTaGGGACTCGGACACACTCAC +
Preference number: 5 (lower is better)
Translates to: VVIGSARLPSSKQPHRPSEVFPL*GLGHTH
Trigger: GTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTC...AGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340437.8
ENST00000394888.8
CDS-3UTR CAA 90 bp GACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTGAGGGACCCCAAAGCTaGAGGAGAGAGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: DRVFRGYHHLSIPFGLAIEGPQS*RREVVG
Trigger: CCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCTC...AATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CAA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCGCAACCCGGGACTGTTaGATAACCGCAATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: CPVDACRSSITPWVPQDLATRDC*ITAMAV
Trigger: CACAGCCATTGCGGTTATCAAACAGTCCCGGGTTGC...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp AGGGTGGTAATTGGCTCTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTGACCCTGGGCATATTTaGGCACACCCAGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: RVVIGSARLPSSKQPHRPDPGHI*AHPVTL
Trigger: GAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTC...AGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAGAGCCAATTACCACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp CTGCCAGGCTTCCCAGCAGCAAGCAACCTCATAGGCCTTCTCTGCTTAGGAGGGCACAAGGGTTCTTCATaGCTGAGGTCCCAATGTCCC +
Preference number: 5 (lower is better)
Translates to: LPGFPAASNLIGLLCLGGHKGSS*LRSQCP
Trigger: GGGACATTGGGACCTCAGCAATGAAGAACCCTTGTG...CCCTCCTAAGCAGAGAAGGCCTATGAGGTTGCTTGCTGCTGGGAAGCCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS CCA 90 bp TACGCAGGCCACTGTAGGTATACAGAATTGCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCTGGCGAACAGGAGGAGGTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: YAGHCRYTELQGSCC*AWEMAPGEQEEVVQ
Trigger: CTGAACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGCAATTCTGTATACCTACAGTGGCCTGCGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS-3UTR CAA 90 bp GAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCTGCAGGGGTCTTGTTGTaGGGCTTGGGAGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: EFSEATTTSAYPLDWPFAAGVLL*GLGDGS
Trigger: GGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGC...AGCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp GTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCATGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: VSEPVPQTVTGSAGWPASCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...TGAGGCCGGCCACCCGGCAGAACCTGTCACAGTTTGAGGCACAGGCTCGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CAA 90 bp ACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGGGTGTCTGGACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: TAKQSSILWGRGYSLGVWTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...CCAGACACCCAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGGAGGTATTCCCCCTCTaGGGACTCGGACACACTCAC +
Preference number: 5 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVEVFPL*GLGHTH
Trigger: GTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTC...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340437.8
ENST00000394888.8
CDS-3UTR CAA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATGGGGTTTGGACCCTCTaGGCCCCATTAAATCTAGTG +
Preference number: 5 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHGVWTL*APLNLV
Trigger: CACTAGATTTAATGGGGCCAAGAGGGTCCAAACCCC...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TTTGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGCATATCCTGCCCAACTaGCTTCTTTCCCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: FGGKGRGWGGLRPLVLIKHILPN*LLSPFL
Trigger: GAGGAATGGGGAAAGAAGCAAGTTGGGCAGGATATG...CTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGCAGGGGGACGGGACCTaGGCCTTTTTGAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKQGDGT*AFLRDG
Trigger: CCCATCCCTCAAAAAGGCCAAGGTCCCGTCCCCCTG...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS GCA 90 bp TTCACTCTGAAATCTCGTCCCTCAGATGACCCTGCCAGGAGAAGCTaGCCACATAAACGGCAGCTCGTCTATTACGCAGGCCACTGTAGG +
Preference number: 5 (lower is better)
Translates to: FTLKSRPSDDPARRS*PHKRQLVYYAGHCR
Trigger: CCTACAGTGGCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGCAGGGTCATCTGAGGGACGAGATTTCAGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463244.6
ENST00000536145.3
ENST00000545934.5
CDS GCA 90 bp CCACCCCTAAGCATTTTTGGTTACCCACACTCACCCAGGAGAAGCTaGCCACATAAACGGCAGCTCGTCTATTACGCAGGCCACTGTAGG +
Preference number: 5 (lower is better)
Translates to: PPLSIFGYPHSPRRS*PHKRQLVYYAGHCR
Trigger: CCTACAGTGGCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGTGAGTGTGGGTAACCAAAAATGCTTAGGGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489728.1
ENST00000544669.5
CDS GCA 90 bp GTGTTCACTCTGAAATCTCGTCCCTCAGATGACCCCAGGAGAAGCTaGCCACATAAACGGCAGCTCGTCTATTACGCAGGCCACTGTAGG +
Preference number: 5 (lower is better)
Translates to: VFTLKSRPSDDPRRS*PHKRQLVYYAGHCR
Trigger: CCTACAGTGGCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGGTCATCTGAGGGACGAGATTTCAGAGTGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CAA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCGCAGGGGTCTTGTTGTaGGGCTTGGGAGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPAGVLL*GLGDGS
Trigger: GGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGC...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp TTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCAAGATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: FRFFPLANRRCGIGRTAKIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...CTTGGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp CAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: QVLPGGRPHVHFFSIKNFIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...AAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CAA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTCTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGLWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp GGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: GKGVGRPPSFSPDQGEEMRSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...CATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp GGGCCCGTGGAGGTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: GPVEVFPLLGLGHTHVSERSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...CTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTCCACGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CAA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCGAGGGACCCCAAAGCTaGAGGAGAGAGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFEGPQS*RREVVG
Trigger: CCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCTC...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATGCTCCAGATACTGCTTaGGAAATGGCACTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHAPDTA*EMALLE
Trigger: TTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAGC...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTCCATCAACCTCACCATaGAACGGCTCCCGGAGAATC +
Preference number: 5 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFPSTSP*NGSRRI
Trigger: GATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGG...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGGACCCTGGGCATATTTaGGCACACCCAGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVDPGHI*AHPVTL
Trigger: GAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTC...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TGGGATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCATGTTAGCAAGGGGTTaGGACCCTCTTGGCCCCATT +
Preference number: 5 (lower is better)
Translates to: WDWEDCQAVFNPVGQRVFMLARG*DPLGPI
Trigger: AATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACAT...GAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAATCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TTTGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGACTAAGAGCTGGTTATaGCAAGAGGTACCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: FGGKGRGWGGLRPLVLIKTKSWL*QEVPKH
Trigger: GTGCTTGGGTACCTCTTGCAATAACCAGCTCTTAGT...CTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp GGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGGAAAAGCAATTCCATTaGCCTGTAGAGAAAATGGCC +
Preference number: 5 (lower is better)
Translates to: GKGRGWGGLRPLVLIKVREKQFH*PVEKMA
Trigger: GGCCATTTTCTCTACAGGCAAATGGAATTGCTTTTC...CCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCTTAACACTTGGCCAGTaGGGTGGGGTGCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: VFRFFPLANRRCGIGRTALTLGQ*GGVPCS
Trigger: AGAACATGGCACCCCACCCAACTGGCCAAGTGTTAA...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS CCA 90 bp CCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCACTaGGGCCGGCAAGATGGAAAAGGAAGAGATGTCAAGAGCTACACC +
Preference number: 5 (lower is better)
Translates to: PIERITWISCWSVVH*GRQDGKGRDVKSYT
Trigger: GGTGTAGCTCTTGACATCTCTTCCTTTTCCATCTTGCCGGCCCCAGTGGACCACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544669.5
CDS-3UTR CAA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TGGAGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: WRKGKGVGRPPSFSPDQGRSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...ACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp ATGGAAAAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTAGAGGGACCCCAAAGCTaGAGGAGAGAGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: MEKPQGKGTTKSWLLQEVEGPQS*RREVVG
Trigger: CCCCACCACCTCTCTCCTCAAGCTTTGGGGTCCCTC...TACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTTTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCGCTCCAGATACTGCTTaGGAAATGGCACTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: VFRFFPLANRRCGIGRTAAPDTA*EMALLE
Trigger: TTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAGC...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp GTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAGTCCATCTCCCGGTTCCTTTCTaGGAAATAATCATCATGCCG +
Preference number: 5 (lower is better)
Translates to: VGRPPSFSPDQGEEMQVHLPVPF*EIIIMP
Trigger: CGGCATGATGATTATTTCCAAGAAAGGAACCGGGAG...ATGGACTTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp CCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTCCATCAACCTCACCATaGAACGGCTCCCGGAGAATC +
Preference number: 5 (lower is better)
Translates to: PSQSHEVFRFFPLANRRCPSTSP*NGSRRI
Trigger: GATTCTCCGGGAGCCGTTCAATGGTGAGGTTGATGG...ACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGAGACCCTGGGCATATTTaGGCACACCCAGTCACTCTC +
Preference number: 5 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGDPGHI*AHPVTL
Trigger: GAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTC...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTATGTTAGCAAGGGGTTaGGACCCTCTTGGCCCCATT +
Preference number: 5 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFMLARG*DPLGPI
Trigger: AATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACAT...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp CATCACTTAACACTTGGCCAGTTGGGTGGGGTGCCATGTTCTGAAGTGGAGGTGCACAAGGGTTCTTCATaGCTGAGGTCCCAATGTCCC +
Preference number: 5 (lower is better)
Translates to: HHLTLGQLGGVPCSEVEVHKGSS*LRSQCP
Trigger: GGGACATTGGGACCTCAGCAATGAAGAACCCTTGTG...CACCTCCACTTCAGAACATGGCACCCCACCCAACTGGCCAAGTGTTAAGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp AAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGGAGATGCAAAAAAGACACCCGGAGTaGCTCTCAATAAGCACATCA +
Preference number: 5 (lower is better)
Translates to: KGVGRPPSFSPDQGEEMQKRHPE*LSISTS
Trigger: TGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTT...TTGCATCTCCTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS TCA 90 bp TCACAGGACCATCTAATGACCACCAAGAGTTCAAGGTGTTCACTCTaGAATCTCGTCCCTCAGATGACCCTGCCAGGAGAAGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: SQDHLMTTKSSRCSL*NLVPQMTLPGEAAH
Trigger: GTGGGCAGCTTCTCCTGGCAGGGTCATCTGAGGGACGAGATTTCAGAGTGAACACCTTGAACTCTTGGTGGTCATTAGATGGTCCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463244.6
ENST00000536145.3
ENST00000545934.5
CDS-3UTR CAA 90 bp CTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCAGCAGGGGTCTTGTTGTaGGGCTTGGGAGATGGCTCC +
Preference number: 5 (lower is better)
Translates to: LSLVGVPTICGQSFQRLPAGVLL*GLGDGS
Trigger: GGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGC...TGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CAA 90 bp TGCCCTGTAGATGCATGCAGAAGTAGCATCACCCCATGGGTACCGCAGGACCTCTGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: CPVDACRSSITPWVPQDLCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...GAGGTCCTGCGGTACCCATGGGGTGATGCTACTTCTGCATGCATCTACAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp GTATTCCCCCTCTTGGGACTCGGACACACTCACGTTTCCGAGCCTGTGCCTCAATGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: VFPLLGLGHTHVSEPVPQCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...TTGAGGCACAGGCTCGGAAACGTGAGTGTGTCCGAGTCCCAAGAGGGGGAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537162.5
ENST00000543545.5
CDS-3UTR CAA 90 bp AAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: KSLGSFPWQTGGVGLGGLTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...CAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp CAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: QSFQRLPPPQHTLWTGHLTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...CAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp GCCGGCCTCACGTCCACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: AGLTSTFSPLRTFPGRSSTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...GGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGTGGACGTGAGGCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp ACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGGAGGTATTCCCCCTCTaGGGACTCGGACACACTCAC +
Preference number: 5 (lower is better)
Translates to: TICGQSFQRLPPPQHTLWEVFPL*GLGHTH
Trigger: GTGAGTGTGTCCGAGTCCCAAGAGGGGGAATACCTC...CCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537162.5
CDS-3UTR CAA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCGCAACCCGGGACTGTTaGATAACCGCAATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPATRDC*ITAMAV
Trigger: CACAGCCATTGCGGTTATCAAACAGTCCCGGGTTGC...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp AGGAAAGGGAAGGGGGTGGGGCGGCCTCCGTCCTTTAGTCCTGATCAAGGTGAGAACTCATACGTTTTCTaGGACAAAGCACCATTCTCT +
Preference number: 5 (lower is better)
Translates to: RKGKGVGRPPSFSPDQGENSYVF*DKAPFS
Trigger: AGAGAATGGTGCTTTGTCCAAGAAAACGTATGAGTT...CTCACCTTGATCAGGACTAAAGGACGGAGGCCGCCCCACCCCCTTCCCTTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp GCAGGACCCTGGGCATATTTTGGCACACCCAGTCACTCTCCTAGATCCTGCATGACTAAGAGCTGGTTATaGCAAGAGGTACCCAAGCAC +
Preference number: 5 (lower is better)
Translates to: AGPWAYFGTPSHSPRSCMTKSWL*QEVPKH
Trigger: GTGCTTGGGTACCTCTTGCAATAACCAGCTCTTAGT...CATGCAGGATCTAGGAGAGTGACTGGGTGTGCCAAAATATGCCCAGGGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACCAGGGGGACGGGACCTaGGCCTTTTTGAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNQGDGT*AFLRDG
Trigger: CCCATCCCTCAAAAAGGCCAAGGTCCCGTCCCCCTG...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS TCA 90 bp GAGGGCTGTGAGGTGGCTGTCAGCACATCATCATACAGGTCAATCTaGTCTGTATTGTTGAACTCTGGGTCCTTTGGCTTCCTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: EGCEVAVSTSSYRSI*SVLLNSGSFGFLGS
Trigger: ACTCCCCAGGAAGCCAAAGGACCCAGAGTTCAACAATACAGATCAGATTGACCTGTATGATGATGTGCTGACAGCCACCTCACAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS GCA 90 bp CTCAGGATAGTTCTCTTTCAGAGATCAATCCAACCCAGGAGAAGCTaGCCACATAAACGGCAGCTCGTCTATTACGCAGGCCACTGTAGG +
Preference number: 5 (lower is better)
Translates to: LRIVLFQRSIQPRRS*PHKRQLVYYAGHCR
Trigger: CCTACAGTGGCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGTTGGATTGATCTCTGAAAGAGAACTATCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CAA 90 bp ACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: TICGQSFQRLPPPQHTLWIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...CCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp ATTGGGAGGACTGCCAAGCAGTCTTCAATCCTGTGGGGCAGAGGGTATTCCCTGTGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: IGRTAKQSSILWGRGYSLCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...CAGGGAATACCCTCTGCCCCACAGGATTGAAGACTGCTTGGCAGTCCTCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp GTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGCCCTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: VFRFFPLANRRCGIGRTALWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...GGCAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp AACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTACTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: NCDRFCRVAGLTSTFSPLLWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...TAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000537162.5
CDS-3UTR CAA 90 bp CACATGCCACGTCTCATGTTAGGTGTCAGATGCCCTGTAGATGCATGCAGAAGTACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: HMPRLMLGVRCPVDACRSTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...ACTTCTGCATGCATCTACAGGGCATCTGACACCTAACATGAGACGTGGCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TGGGCCCGTGGAGGTATTCGTTTCCGAGCCTGTGCCTCAAACTGTGACAGGTTCAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: WARGGIRFRACASNCDRFRSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...GAACCTGTCACAGTTTGAGGCACAGGCTCGGAAACGAATACCTCCACGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000544990.5
CDS-3UTR CAA 90 bp CACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCTGTCTGCCACCTCCCGGTTCCTTTCTaGGAAATAATCATCATGCCG +
Preference number: 5 (lower is better)
Translates to: HHSLWRPGAWTCFLPVCHLPVPF*EIIIMP
Trigger: CGGCATGATGATTATTTCCAAGAAAGGAACCGGGAG...GTGGCAGACAGGAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TACCGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTCTCCCGGTTCCTTTCTaGGAAATAATCATCATGCCG +
Preference number: 5 (lower is better)
Translates to: YRRTSLLPPPSAATTLQFLPVPF*EIIIMP
Trigger: CGGCATGATGATTATTTCCAAGAAAGGAACCGGGAG...AAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp CTTGGACAAAGCACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCGGGGTTTGGACCCTCTaGGCCCCATTAAATCTAGTG +
Preference number: 5 (lower is better)
Translates to: LGQSTILYGDQGPGHVFFGVWTL*APLNLV
Trigger: CACTAGATTTAATGGGGCCAAGAGGGTCCAAACCCC...GAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTGCTTTGTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGATGTTAGCAAGGGGTTaGGACCCTCTTGGCCCCATT +
Preference number: 5 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKMLARG*DPLGPI
Trigger: AATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACAT...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp GTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAGTCACAAGGGTTCTTCATaGCTGAGGTCCCAATGTCCC +
Preference number: 5 (lower is better)
Translates to: VPMSPSPNGQYLPLKQGSHKGSS*LRSQCP
Trigger: GGGACATTGGGACCTCAGCAATGAAGAACCCTTGTG...ACTTCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp ACGAAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACATATCCTGCCCAACTaGCTTCTTTCCCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: TKSLGSFPWQTGGVGLGGHILPN*LLSPFL
Trigger: GAGGAATGGGGAAAGAAGCAAGTTGGGCAGGATATG...TCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp AAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACCCAAGTTAACACTTGGCCAGTaGGGTGGGGTGCCATGTTCT +
Preference number: 5 (lower is better)
Translates to: KPQGKGTTKSWLLQEVPKLTLGQ*GGVPCS
Trigger: AGAACATGGCACCCCACCCAACTGGCCAAGTGTTAA...CTTGGGTACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS TCA 90 bp GTTGAACTCCTCGTCAGCATATATATCAATCAAGTCCACTCCTTCTaGCATGGCTCCGGAAGGAAGATCGCGAGTCCGGAGGATGGACAA +
Preference number: 5 (lower is better)
Translates to: VELLVSIYINQVHSF*HGSGRKIASPEDGQ
Trigger: TTGTCCATCCTCCGGACTCGCGATCTTCCTTCCGGAGCCATGTCAGAAGGAGTGGACTTGATTGATATATATGCTGACGAGGAGTTCAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000537641.5
ENST00000539952.5
ENST00000541963.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
CDS TCA 90 bp GAGGGCTGTGAGGTGGCTGTCAGCACATCATCATACAGGTCAATCTaGTCTGTATTGTTGAACTCTGGGTCCTGGTTGAACTCCTCGTCA +
Preference number: 5 (lower is better)
Translates to: EGCEVAVSTSSYRSI*SVLLNSGSWLNSSS
Trigger: TGACGAGGAGTTCAACCAGGACCCAGAGTTCAACAATACAGATCAGATTGACCTGTATGATGATGTGCTGACAGCCACCTCACAGCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS TCA 90 bp TCACAGGACCATCTAATGACCACCAAGAGTTCAAGGTGTTCACTCTaGAATCTCGTCCCTCAGATGACCCCAGGAGAAGCTGCCCACATA +
Preference number: 5 (lower is better)
Translates to: SQDHLMTTKSSRCSL*NLVPQMTPGEAAHI
Trigger: TATGTGGGCAGCTTCTCCTGGGGTCATCTGAGGGACGAGATTTCAGAGTGAACACCTTGAACTCTTGGTGGTCATTAGATGGTCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS-3UTR CAA 90 bp TGGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGTTCAAGATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: WSVVHIITGPSNDHQEFKIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...CTTGAACTCTTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR CAA 90 bp CACCATTCTCTATGGAGACCAGGGGCCTGGACATGTTTTCTTCCTGTCTGCCACTGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: HHSLWRPGAWTCFLPVCHCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...GTGGCAGACAGGAAGAAAACATGTCCAGGCCCCTGGTCTCCATAGAGAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp CACCACATCATAGACTCCTATAGAGCGAATAACCTGGATCAGCTGCTGGTCTGTACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: HHIIDSYRANNLDQLLVCTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...ACAGACCAGCAGCTGATCCAGGTTATTCGCTCTATAGGAGTCTATGATGTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
CDS-3UTR CAA 90 bp ATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTACCTCAGCATACCCTTaGGACTGGCCATTTGCTCGA +
Preference number: 5 (lower is better)
Translates to: ICGQSFQRLPPPQHTLWTTSAYP*DWPFAR
Trigger: TCGAGCAAATGGCCAGTCCAAAGGGTATGCTGAGGT...AGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp AACTGTGACAGGTTCTGCCGGGTGGCCGGCCTCACGTCCACTTTTTCTCCATTAAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: NCDRFCRVAGLTSTFSPLRSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...TAATGGAGAAAAAGTGGACGTGAGGCCGGCCACCCGGCAGAACCTGTCACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CAA 90 bp CGCAGGACCTCGCTGCTGCCTCCTCCTTCAGCAGCAACCACATTACAATTTGGAGAAAAGCAATTCCATTaGCCTGTAGAGAAAATGGCC +
Preference number: 5 (lower is better)
Translates to: RRTSLLPPPSAATTLQFGEKQFH*PVEKMA
Trigger: GGCCATTTTCTCTACAGGCAAATGGAATTGCTTTTC...TCCAAATTGTAATGTGGTTGCTGCTGAAGGAGGAGGCAGCAGCGAGGTCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp ATTTCTGTTCTCATGGTCCCTCCTCAAAGGGCTGGAAAGGTAAAGGAGTTAAACATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: ISVLMVPPQRAGKVKELNIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...GTTTAACTCCTTTACCTTTCCAGCCCTTTGAGGAGGGACCATGAGAACAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp AGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTATTGCAGGGGTCTTGTaGTTGGGCTTGGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: RTFPGRSSNNLWTEFSEAIAGVL*LGLGDG
Trigger: GCCATCTCCCAAGCCCAACAACAAGACCCCTGCAAT...AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CAA 90 bp AAGTCTTTAGGTTCTTTCCCCTGGCAAACAGGAGGTGTGGGATTGGGAGGACTGTGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: KSLGSFPWQTGGVGLGGLCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...CAGTCCTCCCAATCCCACACCTCCTGTTTGCCAGGGGAAAGAACCTAAAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp CAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGTGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QSFQRLPPPQHTLWTGHLCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...CAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp AGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGCCTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: RVFRGYHHLSIPFGLAICLWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...GCAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTCAGGGGGACGGGACCTaGGCCTTTTTGAGGGATGGG +
Preference number: 5 (lower is better)
Translates to: LHFKRHPELLSISTSLNTQGDGT*AFLRDG
Trigger: CCCATCCCTCAAAAAGGCCAAGGTCCCGTCCCCCTG...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp CAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGGACTGGCCATTTGAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: QSFQRLPPPQHTLWTGHLRSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...CAAATGGCCAGTCCAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp AACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGTAGCAACCCGGGACTGTTaGATAACCGCAATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: NRQYVRGKAGTEVAFHKVATRDC*ITAMAV
Trigger: CACAGCCATTGCGGTTATCAAACAGTCCCGGGTTGC...TACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TATTTTCTTTGGGAAGGAAGTCTTCCCATCAACCTCACCATTGAACGGCTCCCGCTCCCGGTTCCTTTCTaGGAAATAATCATCATGCCG +
Preference number: 5 (lower is better)
Translates to: YFLWEGSLPINLTIERLPLPVPF*EIIIMP
Trigger: CGGCATGATGATTATTTCCAAGAAAGGAACCGGGAG...CGGGAGCCGTTCAATGGTGAGGTTGATGGGAAGACTTCCTTCCCAAAGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp ATGGAAAAGCCCCAGGGAAAGGGAACAACTAAGAGCTGGTTATTGCAAGAGGTACATATCCTGCCCAACTaGCTTCTTTCCCCATTCCTC +
Preference number: 5 (lower is better)
Translates to: MEKPQGKGTTKSWLLQEVHILPN*LLSPFL
Trigger: GAGGAATGGGGAAAGAAGCAAGTTGGGCAGGATATG...TACCTCTTGCAATAACCAGCTCTTAGTTGTTCCCTTTCCCTGGGGCTTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCAAAAGACACCCGGAGTaGCTCTCAATAAGCACATCA +
Preference number: 5 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPKRHPE*LSISTS
Trigger: TGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTT...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS TCA 90 bp TGGCTGTCAGCACATCATCATACAGGTCAATCTGATCTGTATTGTTaGACTCTGGGTCCTTTGGCTTCCTGGGGAGTAAATTCCACAGGT +
Preference number: 5 (lower is better)
Translates to: WLSAHHHTGQSDLYC*TLGPLASWGVNSTG
Trigger: ACCTGTGGAATTTACTCCCCAGGAAGCCAAAGGACCCAGAGTTCAACAATACAGATCAGATTGACCTGTATGATGATGTGCTGACAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS-3UTR CAA 90 bp GGTCTGTGGTCCACATTATCACAGGACCATCTAATGACCACCAAGAGTTCAAGGTGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: GLWSTLSQDHLMTTKSSRCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...CCTTGAACTCTTGGTGGTCATTAGATGGTCCTGTGATAATGTGGACCACAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535222.5
ENST00000536145.3
CDS-3UTR CAA 90 bp TTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCTGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: FPGRSSNNLWTEFSEATTCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...GGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS-3UTR CAA 90 bp GGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCACTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: GRSSNNLWTEFSEATTTSLWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...TGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp TTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCCCAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: FLPVCHPSQSHEVFRFFPRSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...GGGAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
CDS-3UTR CAA 90 bp GAGGTCCCAATGTCCCCATCTCCCAATGGGCAGTACCTTCCTCTAAAACAAGGAAACTCATACGTTTTCTaGGACAAAGCACCATTCTCT +
Preference number: 5 (lower is better)
Translates to: EVPMSPSPNGQYLPLKQGNSYVF*DKAPFS
Trigger: AGAGAATGGTGCTTTGTCCAAGAAAACGTATGAGTT...TCCTTGTTTTAGAGGAAGGTACTGCCCATTGGGAGATGGGGACATTGGGACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS TCA 90 bp TTTAGACCGGATAGACGCGTGTTCAAGCCTAGGACTGGTACAGCTTaGAACCACTGCCAGTTTGCTGAAAATGATTCCTCAGATGATCAA +
Preference number: 5 (lower is better)
Translates to: FRPDRRVFKPRTGTA*NHCQFAENDSSDDQ
Trigger: TTGATCATCTGAGGAATCATTTTCAGCAAACTGGCAGTGGTTTCAAGCTGTACCAGTCCTAGGCTTGAACACGCGTCTATCCGGTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS GCA 90 bp CTTATTTACCCTGGCTCAAATCTGAAAGGAACAATAGTCCTTACCTaGCATGGTGGTTATAGGGGGCAGAGGCCTTCATGTAAGTATCTG +
Preference number: 5 (lower is better)
Translates to: LIYPGSNLKGTIVLT*HGGYRGQRPSCKYL
Trigger: CAGATACTTACATGAAGGCCTCTGCCCCCTATAACCACCATGGCAGGTAAGGACTATTGTTCCTTTCAGATTTGAGCCAGGGTAAATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537641.5
CDS CCA 90 bp TTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCAGGA +
Preference number: 5 (lower is better)
Translates to: FSPLRTFPGRSSNNL*TEFSEATTTSAYPG
Trigger: TCCTGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543545.5
CDS-3UTR CAA 90 bp AGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACTGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: SSNNLWTEFSEATTTSAYCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...GTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp AACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTGCTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: NNLWTEFSEATTTSAYPLLWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...CAAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp CAACAATTTGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCTTTCTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: QQFVDRVFRGYHHLSIPFLWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...AAAGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000535222.5
ENST00000536548.5
ENST00000537162.5
ENST00000541963.5
CDS-3UTR CAA 90 bp AACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGTAGCTCCAGATACTGCTTaGGAAATGGCACTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: NRQYVRGKAGTEVAFHKVAPDTA*EMALLE
Trigger: TTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAGC...TACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp GTTTTCTTCCTGTCTGCCACCCCTCCCAATCACACGAAGTCTTTAGGTTCTTTCGAAAAGCAATTCCATTaGCCTGTAGAGAAAATGGCC +
Preference number: 5 (lower is better)
Translates to: VFFLSATPPNHTKSLGSFEKQFH*PVEKMA
Trigger: GGCCATTTTCTCTACAGGCAAATGGAATTGCTTTTC...GAAAGAACCTAAAGACTTCGTGTGATTGGGAGGGGTGGCAGACAGGAAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp CAAAGAAGTGGTATGTTAGCAAGGGGTTTGGACCCTCTTGGCCCCATTAAATCTAAAAGACACCCGGAGTaGCTCTCAATAAGCACATCA +
Preference number: 5 (lower is better)
Translates to: QRSGMLARGLDPLGPIKSKRHPE*LSISTS
Trigger: TGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTT...AGATTTAATGGGGCCAAGAGGGTCCAAACCCCTTGCTAACATACCACTTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS TCA 90 bp ATGATCAAGGAAAATCCCAAAGCTCCTGATGACACCTCACCTGGTTaGACTCCTCGTCAGCATATATATCAATCAAGTCCACTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: MIKENPKAPDDTSPG*TPRQHIYQSSPLLL
Trigger: CAGAAGGAGTGGACTTGATTGATATATATGCTGACGAGGAGTTCAACCAGGTGAGGTGTCATCAGGAGCTTTGGGATTTTCCTTGATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS CCA 90 bp TTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTaGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCTGGAT +
Preference number: 5 (lower is better)
Translates to: FSPLRTFPGRSSNNL*TEFSEATTTSAYLD
Trigger: ATCCAGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544990.5
CDS-3UTR CAA 90 bp GAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTATGTAGGTATACAGAATaGCAGGGGTCTTGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: ELSLVGVPTICGQSFQRLCRYTE*QGSCCW
Trigger: CCAACAACAAGACCCCTGCAATTCTGTATACCTACA...TAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS GCA 90 bp GGAGGGCCCGAATCTCGGCTGTACAGAGAAAATACCATCCTTGATTaGTCACATCCCTTATTATTTTTACTGTACTCTACAACACTTTGG +
Preference number: 5 (lower is better)
Translates to: GGPESRLYRENTILD*SHPLLFLLYSTTLW
Trigger: CCAAAGTGTTGTAGAGTACAGTAAAAATAATAAGGGATGTGAGCAATCAAGGATGGTATTTTCTCTGTACAGCCGAGATTCGGGCCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537641.5
CDS-3UTR CAA 90 bp AACCGTCAATACGTGAGAGGGAAAGCAGGAACAGAAGTAGCTTTTCATAAGGTACTTTGGACTGGCCATTaGCTCGATTCTCTGCAAATT +
Preference number: 5 (lower is better)
Translates to: NRQYVRGKAGTEVAFHKVLWTGH*LDSLQI
Trigger: AATTTGCAGAGAATCGAGCAAATGGCCAGTCCAAAG...TACCTTATGAAAAGCTACTTCTGTTCCTGCTTTCCCTCTCACGTATTGACGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS-3UTR CAA 90 bp AGAACTTTCCCTGGTAGGAGTTCCAACAATTTGTGGACAGAGTTTTCAGAGGCTAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAG +
Preference number: 5 (lower is better)
Translates to: RTFPGRSSNNLWTEFSEARSSNN*WTEFSE
Trigger: CTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCT...AGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000535222.5
ENST00000537162.5
ENST00000541963.5
ENST00000543545.5
ENST00000544990.5
CDS TCA 90 bp ATATGGCCAATTATTAGTGGAGAAACTGGGATTCAAATTGGTACCTaGATGCAGACACCATACTCTCACTCAGATACCAGGTTAAGGCAG +
Preference number: 5 (lower is better)
Translates to: IWPIISGETGIQIGT*MQTPYSHSDTRLRQ
Trigger: CTGCCTTAACCTGGTATCTGAGTGAGAGTATGGTGTCTGCATTCAGGTACCAATTTGAATCCCAGTTTCTCCACTAATAATTGGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537641.5
CDS-3UTR CAA 90 bp CTACATTTTAAAAGACACCCGGAGTTGCTCTCAATAAGCACATCACTTAACACTAACTCATACGTTTTCTaGGACAAAGCACCATTCTCT +
Preference number: 5 (lower is better)
Translates to: LHFKRHPELLSISTSLNTNSYVF*DKAPFS
Trigger: AGAGAATGGTGCTTTGTCCAAGAAAACGTATGAGTT...AGTGTTAAGTGATGTGCTTATTGAGAGCAACTCCGGGTGTCTTTTAAAATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
CDS GCA 72 bp GAAGATGCCACGCTCTCCCAGGCCGCCGGGGGTCGCTaGCCATCACCCTCGGGCCCGACCCGGGTAGCGCCG +
Preference number: 6 (lower is better)
Translates to: EDATLSQAAGGR*PSPSGPTRVAP
Trigger: CGGCGCTACCCGGGTCGGGCCCGAGGGTGATGGGCAGCGACCCCCGGCGGCCTGGGAGAGCGTGGCATCTTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413184.6
ENST00000489728.1
CDS GCA 72 bp GCCGTCCCATCTCAACCGACCCCCTTCCCGCCTCAGTaGCGGCCCGGACCCCTCTTCCGGCCCAACCTGCCC +
Preference number: 6 (lower is better)
Translates to: AVPSQPTPFPPQ*RPGPLFRPNLP
Trigger: GGGCAGGTTGGGCCGGAAGAGGGGTCCGGGCCGGCACTGAGGCGGGAAGGGGGTCGGTTGAGATGGGACGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340437.8
CDS TCA 72 bp CCGGTGCCTCCTGCTGCTCTCCCGGGACCGGCTAGGTaGCCTTTCCCGGGAGCGATGTCTTTTCCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: PVPPAALPGPAR*PFPGAMSFPGR
Trigger: TCTTCCAGGAAAAGACATCGCTCCCGGGAAAGGTCACCTAGCCGGTCCCGGGAGAGCAGCAGGAGGCACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000477890.6
ENST00000537641.5
CDS GCA 72 bp ATGGCTCCTGGCGAACAGGAGGAGGTGGTTCAGTGCTaGTGCTTCTGTCATCTGAGGGCTGTGAGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: MAPGEQEEVVQC*CFCHLRAVRWL
Trigger: CAGCCACCTCACAGCCCTCAGATGACAGAAGCAGCAGCACTGAACCACCTCCTCCTGTTCGCCAGGAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS CCA 72 bp GCAGGGGTCTTGTTGTTGGGCTTGGGAGATGGCTCCTaGCGAACAGGAGGAGGTGGTTCAGTGCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: AGVLLLGLGDGS*RTGGGGSVLLL
Trigger: AAGCAGCAGCACTGAACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS GCA 72 bp AAATCTCGTCCCTCAGATGACCCTGCCAGGAGAAGCTaGCCACATAAACGGCAGCTCGTCTATTACGCAGGC +
Preference number: 6 (lower is better)
Translates to: KSRPSDDPARRS*PHKRQLVYYAG
Trigger: GCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGCAGGGTCATCTGAGGGACGAGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463244.6
ENST00000536145.3
ENST00000545934.5
CDS GCA 72 bp CTGAAATCTCGTCCCTCAGATGACCCCAGGAGAAGCTaGCCACATAAACGGCAGCTCGTCTATTACGCAGGC +
Preference number: 6 (lower is better)
Translates to: LKSRPSDDPRRS*PHKRQLVYYAG
Trigger: GCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGGTCATCTGAGGGACGAGATTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS CAA 90 bp GAGATGAGGACACGGCAACGCTCATCATTGGCAACCCGGGACTGTTaGATAACCGCAATGGCTGTGAGCAGCGTCTCAATTGCGTCACTG +
Preference number: 6 (lower is better)
Translates to: EMRTRQRSSLATRDC*ITAMAVSSVSIASL
Trigger: CAGTGACGCAATTGAGACGCTGCTCACAGCCATTGCGGTTATCAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCGTGTCCTCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000477890.6
ENST00000537641.5
CDS CCA 72 bp AGGTATACAGAATTGCAGGGGTCTTGTTGTTGGGCTTaGGAGATGGCTCCTGGCGAACAGGAGGAGGTGGTT +
Preference number: 6 (lower is better)
Translates to: RYTELQGSCCWA*EMAPGEQEEVV
Trigger: AACCACCTCCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGCAATTCTGTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS CCA 72 bp CACTGTAGGTATACAGAATTGCAGGGGTCTTGTTGTTaGGCTTGGGAGATGGCTCCTGGCGAACAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: HCRYTELQGSCC*AWEMAPGEQEE
Trigger: CTCCTCCTGTTCGCCAGGAGCCATCTCCCAAGCCCAACAACAAGACCCCTGCAATTCTGTATACCTACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS CCA 72 bp CGAATAACCTGGATCAGCTGCTGGTCTGTGGTCCACTaGGGCCGGCAAGATGGAAAAGGAAGAGATGTCAAG +
Preference number: 6 (lower is better)
Translates to: RITWISCWSVVH*GRQDGKGRDVK
Trigger: CTTGACATCTCTTCCTTTTCCATCTTGCCGGCCCCAGTGGACCACAGACCAGCAGCTGATCCAGGTTATTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544669.5
CDS CAA 90 bp AGACAGTCCTTAAGAGAGGAGATGAGGACACGGCAACGCTCATCATaGGCAACCCGGGACTGTTTGATAACCGCAATGGCTGTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: RQSLREEMRTRQRSS*ATRDCLITAMAVSS
Trigger: GCTGCTCACAGCCATTGCGGTTATCAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCGTGTCCTCATCTCCTCTCTTAAGGACTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000477890.6
ENST00000537641.5
CDS GCA 72 bp AGCATTTTTGGTTACCCACACTCACCCAGGAGAAGCTaGCCACATAAACGGCAGCTCGTCTATTACGCAGGC +
Preference number: 6 (lower is better)
Translates to: SIFGYPHSPRRS*PHKRQLVYYAG
Trigger: GCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGTGAGTGTGGGTAACCAAAAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489728.1
ENST00000544669.5
CDS CAA 72 bp ACACGGCAACGCTCATCATTGGCAACCCGGGACTGTTaGATAACCGCAATGGCTGTGAGCAGCGTCTCAATT +
Preference number: 6 (lower is better)
Translates to: TRQRSSLATRDC*ITAMAVSSVSI
Trigger: AATTGAGACGCTGCTCACAGCCATTGCGGTTATCAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000477890.6
ENST00000537641.5
CDS TCA 72 bp CTCGTCAGCATATATATCAATCAAGTCCACTCCTTCTaGCATGGCTCCGGAAGGAAGATCGCGAGTCCGGAG +
Preference number: 6 (lower is better)
Translates to: LVSIYINQVHSF*HGSGRKIASPE
Trigger: CTCCGGACTCGCGATCTTCCTTCCGGAGCCATGTCAGAAGGAGTGGACTTGATTGATATATATGCTGACGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000474684.1
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000537641.5
ENST00000539952.5
ENST00000541963.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
CDS GCA 72 bp TTTGATAACCGCAATGGCTGTGAGCAGCGTCTCAATTaGGTCACTGTAATCCCCTGCACTGGCTCCAGATAC +
Preference number: 6 (lower is better)
Translates to: FDNRNGCEQRLN*VTVIPCTGSRY
Trigger: GTATCTGGAGCCAGTGCAGGGGATTACAGTGACGCAATTGAGACGCTGCTCACAGCCATTGCGGTTATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000477890.6
ENST00000537641.5
CDS GCA 72 bp GTTCTCTTTCAGAGATCAATCCAACCCAGGAGAAGCTaGCCACATAAACGGCAGCTCGTCTATTACGCAGGC +
Preference number: 6 (lower is better)
Translates to: VLFQRSIQPRRS*PHKRQLVYYAG
Trigger: GCCTGCGTAATAGACGAGCTGCCGTTTATGTGGGCAGCTTCTCCTGGGTTGGATTGATCTCTGAAAGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536548.5
ENST00000537162.5
ENST00000626926.1
CDS CAA 72 bp TTAAGAGAGGAGATGAGGACACGGCAACGCTCATCATaGGCAACCCGGGACTGTTTGATAACCGCAATGGCT +
Preference number: 6 (lower is better)
Translates to: LREEMRTRQRSS*ATRDCLITAMA
Trigger: AGCCATTGCGGTTATCAAACAGTCCCGGGTTGCCAATGATGAGCGTTGCCGTGTCCTCATCTCCTCTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000477890.6
ENST00000537641.5
CDS GCA 72 bp TGCGTCACTGTAATCCCCTGCACTGGCTCCAGATACTaGTTTGGAAATGGCACTGCTGGAAATTGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: CVTVIPCTGSRY*FGNGTAGNCSV
Trigger: AACAGAGCAATTTCCAGCAGTGCCATTTCCAAAGCAGTATCTGGAGCCAGTGCAGGGGATTACAGTGACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000477890.6
ENST00000537641.5
CDS GCA 72 bp CCTGGATCAGCTGCTGGTCTGTGGTCCATTAATCATTaGTTTCTTCGGCACCAGTACGTCCTCAGGATAGTT +
Preference number: 6 (lower is better)
Translates to: PGSAAGLWSINH*FLRHQYVLRIV
Trigger: AACTATCCTGAGGACGTACTGGTGCCGAAGAAAGCAATGATTAATGGACCACAGACCAGCAGCTGATCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536548.5
ENST00000537162.5
CDS GCA 72 bp CCTGGCTCAAATCTGAAAGGAACAATAGTCCTTACCTaGCATGGTGGTTATAGGGGGCAGAGGCCTTCATGT +
Preference number: 6 (lower is better)
Translates to: PGSNLKGTIVLT*HGGYRGQRPSC
Trigger: ACATGAAGGCCTCTGCCCCCTATAACCACCATGGCAGGTAAGGACTATTGTTCCTTTCAGATTTGAGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537641.5
CDS TCA 72 bp CATCTAATGACCACCAAGAGTTCAAGGTGTTCACTCTaGAATCTCGTCCCTCAGATGACCCTGCCAGGAGAA +
Preference number: 6 (lower is better)
Translates to: HLMTTKSSRCSL*NLVPQMTLPGE
Trigger: TTCTCCTGGCAGGGTCATCTGAGGGACGAGATTTCAGAGTGAACACCTTGAACTCTTGGTGGTCATTAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463244.6
ENST00000536145.3
ENST00000545934.5
CDS TCA 72 bp CATCTAATGACCACCAAGAGTTCAAGGTGTTCACTCTaGAATCTCGTCCCTCAGATGACCCCAGGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: HLMTTKSSRCSL*NLVPQMTPGEA
Trigger: AGCTTCTCCTGGGGTCATCTGAGGGACGAGATTTCAGAGTGAACACCTTGAACTCTTGGTGGTCATTAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535222.5
CDS TCA 72 bp GAGGTGGCTGTCAGCACATCATCATACAGGTCAATCTaGTCTGTATTGTTGAACTCTGGGTCCTGGTTGAAC +
Preference number: 6 (lower is better)
Translates to: EVAVSTSSYRSI*SVLLNSGSWLN
Trigger: GTTCAACCAGGACCCAGAGTTCAACAATACAGATCAGATTGACCTGTATGATGATGTGCTGACAGCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000413184.6
ENST00000413232.5
ENST00000439958.8
ENST00000448745.5
ENST00000449811.5
ENST00000450000.5
ENST00000463244.6
ENST00000477890.6
ENST00000489728.1
ENST00000535222.5
ENST00000536145.3
ENST00000536548.5
ENST00000537162.5
ENST00000539952.5
ENST00000541963.5
ENST00000543545.5
ENST00000544585.5
ENST00000544669.5
ENST00000544990.5
ENST00000545934.5
ENST00000626926.1
CDS TCA 72 bp GAGGTGGCTGTCAGCACATCATCATACAGGTCAATCTaGTCTGTATTGTTGAACTCTGGGTCCTTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: EVAVSTSSYRSI*SVLLNSGSFGF
Trigger: GAAGCCAAAGGACCCAGAGTTCAACAATACAGATCAGATTGACCTGTATGATGATGTGCTGACAGCCACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS TCA 72 bp CATCTAATGACCACCAAGAGTTCAAGGTGTTCACTCTaGAATCTCGTCCCTCAGATGACCCTGCTAGACATA +
Preference number: 6 (lower is better)
Translates to: HLMTTKSSRCSL*NLVPQMTLLDI
Trigger: TATGTCTAGCAGGGTCATCTGAGGGACGAGATTTCAGAGTGAACACCTTGAACTCTTGGTGGTCATTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544669.5
CDS CAA 90 bp AGGGTGGAGGGCCCGAATCTCGGCTGTACAGAGAAAATACCATCCTaGATTGCTCACATCCCTTATTATTTTTACTGTACTCTACAACAC +
Preference number: 6 (lower is better)
Translates to: RVEGPNLGCTEKIPS*IAHIPYYFYCTLQH
Trigger: GTGTTGTAGAGTACAGTAAAAATAATAAGGGATGTGAGCAATCAAGGATGGTATTTTCTCTGTACAGCCGAGATTCGGGCCCTCCACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537641.5
CDS CAA 90 bp ACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCCA +
Preference number: 6 (lower is better)
Translates to: TFSPLRTFPGRSSNN*WTEFSEATTTSAYP
Trigger: TGGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543545.5
CDS CAA 90 bp ACTTTTTCTCCATTAAGAACTTTCCCTGGTAGGAGTTCCAACAATTaGTGGACAGAGTTTTCAGAGGCTACCACCACCTCAGCATACCTG +
Preference number: 6 (lower is better)
Translates to: TFSPLRTFPGRSSNN*WTEFSEATTTSAYL
Trigger: CAGGTATGCTGAGGTGGTGGTAGCCTCTGAAAACTCTGTCCACAAATTGTTGGAACTCCTACCAGGGAAAGTTCTTAATGGAGAAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544990.5
CDS TCA 72 bp GAAAATCCCAAAGCTCCTGATGACACCTCACCTGGTTaGACTCCTCGTCAGCATATATATCAATCAAGTCCA +
Preference number: 6 (lower is better)
Translates to: ENPKAPDDTSPG*TPRQHIYQSSP
Trigger: TGGACTTGATTGATATATATGCTGACGAGGAGTTCAACCAGGTGAGGTGTCATCAGGAGCTTTGGGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS TCA 72 bp GCACATCATCATACAGGTCAATCTGATCTGTATTGTTaGACTCTGGGTCCTTTGGCTTCCTGGGGAGTAAAT +
Preference number: 6 (lower is better)
Translates to: AHHHTGQSDLYC*TLGPLASWGVN
Trigger: ATTTACTCCCCAGGAAGCCAAAGGACCCAGAGTTCAACAATACAGATCAGATTGACCTGTATGATGATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS CAA 72 bp TCTATCCCGGTGTCTCTCATGCTCCCGGTTCCTTTCTaGGAAATAATCATCATGCCGATCTTCATTATGAAG +
Preference number: 6 (lower is better)
Translates to: SIPVSLMLPVPF*EIIIMPIFIMK
Trigger: CTTCATAATGAAGATCGGCATGATGATTATTTCCAAGAAAGGAACCGGGAGCATGAGAGACACCGGGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340437.8
ENST00000394888.8
ENST00000439958.8
ENST00000448745.5
ENST00000537641.5
CDS TCA 72 bp GGTCCTTTGGCTTCCTGGGGAGTAAATTCCACAGGTTaGTTCACCATTCTATTACACCTGCTTTTTATTTGC +
Preference number: 6 (lower is better)
Translates to: GPLASWGVNSTG*FTILLHLLFIC
Trigger: GCAAATAAAAAGCAGGTGTAATAGAATGGTGAATCAACCTGTGGAATTTACTCCCCAGGAAGCCAAAGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS CAA 72 bp GGGTCCTTTGGCTTCCTGGGGAGTAAATTCCACAGGTaGATTCACCATTCTATTACACCTGCTTTTTATTTG +
Preference number: 6 (lower is better)
Translates to: GSFGFLGSKFHR*IHHSITPAFYL
Trigger: CAAATAAAAAGCAGGTGTAATAGAATGGTGAATCAACCTGTGGAATTTACTCCCCAGGAAGCCAAAGGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS TCA 72 bp ATTATTAGTGGAGAAACTGGGATTCAAATTGGTACCTaGATGCAGACACCATACTCTCACTCAGATACCAGG +
Preference number: 6 (lower is better)
Translates to: IISGETGIQIGT*MQTPYSHSDTR
Trigger: CCTGGTATCTGAGTGAGAGTATGGTGTCTGCATTCAGGTACCAATTTGAATCCCAGTTTCTCCACTAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537641.5
CDS CCA 72 bp CGAAGATTAAAACTTATTGTAACTTTGACTGCCGTTTaGGCTGGCTGGTCATCAGTTCAAACATTGACAGCT +
Preference number: 6 (lower is better)
Translates to: RRLKLIVTLTAV*AGWSSVQTLTA
Trigger: AGCTGTCAATGTTTGAACTGATGACCAGCCAGCCCAAACGGCAGTCAAAGTTACAATAAGTTTTAATCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544669.5
CDS CAA 72 bp TATGGCCAATTATTAGTGGAGAAACTGGGATTCAAATaGGTACCTGAATGCAGACACCATACTCTCACTCAG +
Preference number: 6 (lower is better)
Translates to: YGQLLVEKLGFK*VPECRHHTLTQ
Trigger: CTGAGTGAGAGTATGGTGTCTGCATTCAGGTACCAATTTGAATCCCAGTTTCTCCACTAATAATTGGCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537641.5
CDS CAA 72 bp ACGAAGATTAAAACTTATTGTAACTTTGACTGCCGTTaGGGCTGGCTGGTCATCAGTTCAAACATTGACAGC +
Preference number: 6 (lower is better)
Translates to: TKIKTYCNFDCR*GWLVISSNIDS
Trigger: GCTGTCAATGTTTGAACTGATGACCAGCCAGCCCAAACGGCAGTCAAAGTTACAATAAGTTTTAATCTTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544669.5
CDS CAA 90 bp TTGAACTCTGGGTCCTTTGGCTTCCTGGGGAGTAAATTCCACAGGTaGATTCACCATTCTATTACACCTGCTTTTTATTTGCTCTTAAAT +
Preference number: 6 (lower is better)
Translates to: LNSGSFGFLGSKFHR*IHHSITPAFYLLLN
Trigger: ATTTAAGAGCAAATAAAAAGCAGGTGTAATAGAATGGTGAATCAACCTGTGGAATTTACTCCCCAGGAAGCCAAAGGACCCAGAGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474684.1
CDS TCA 72 bp GCTTCCAACCAGACTCCATTAGGGCTTCTGAATCTTTaGATTCGATCCAAATTGAAGAGAAAGCTCAGTTTT +
Preference number: 6 (lower is better)
Translates to: ASNQTPLGLLNL*IRSKLKRKLSF
Trigger: AAAACTGAGCTTTCTCTTCAATTTGGATCGAATTCAAAGATTCAGAAGCCCTAATGGAGTCTGGTTGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494016.1
CDS CCA 72 bp AAACTTATTGTAACTTTGACTGCCGTTTGGGCTGGCTaGTCATCAGTTCAAACATTGACAGCTAGCAATTTT +
Preference number: 6 (lower is better)
Translates to: KLIVTLTAVWAG*SSVQTLTASNF
Trigger: AAAATTGCTAGCTGTCAATGTTTGAACTGATGACCAGCCAGCCCAAACGGCAGTCAAAGTTACAATAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544669.5
CDS CAA 72 bp TGCTTCCAACCAGACTCCATTAGGGCTTCTGAATCTTaGAATTCGATCCAAATTGAAGAGAAAGCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: CFQPDSIRASES*NSIQIEEKAQF
Trigger: AAACTGAGCTTTCTCTTCAATTTGGATCGAATTCAAAGATTCAGAAGCCCTAATGGAGTCTGGTTGGAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494016.1
CDS GCA 72 bp GAATCTCGGCTGTACAGAGAAAATACCATCCTTGATTaGTCACATCCCTTATTATTTTTACTGTACTCTACA +
Preference number: 6 (lower is better)
Translates to: ESRLYRENTILD*SHPLLFLLYST
Trigger: TGTAGAGTACAGTAAAAATAATAAGGGATGTGAGCAATCAAGGATGGTATTTTCTCTGTACAGCCGAGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537641.5