Pregenerated sensors for CPSF4L (Homo sapiens)
Ensembl gene IDs: ENSG00000187959Ensembl transcript IDs: ENST00000344935.8, ENST00000397671.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTGCCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTAGGATaGCAGCAGGCTTACTGTGGAACTTGGGAAACAGAATCCCATAGT | + |
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Preference number: 1 (lower is better) Translates to: PATGYFCTSLIPCLG*QQAYCGTWETESHS Trigger: ACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGCCTGCTGTCATCCTAAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR GCA 90 bp | CAGTTGATAGCGGCAGCTGAAGCCATATACAGAGGAGCTGCCACGTaGAACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGATC | + |
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Preference number: 1 (lower is better) Translates to: QLIAAAEAIYRGAAT*NPDLLVGAEQSIMI Trigger: GATCATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCTCCTCTGTATATGGCTTCAGCTGCCGCTATCAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR GCA 90 bp | TTTAGTAGCTCGTTCACTTACAGGATCAAAAGAAATAAACCTGCCTaGCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTAGGATG | + |
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Preference number: 1 (lower is better) Translates to: FSSSFTYRIKRNKPA*HRLLLHLTHTLLRM Trigger: CATCCTAAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCAGGCAGGTTTATTTCTTTTGATCCTGTAAGTGAACGAGCTACTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR TCA 90 bp | AATAAGCCATACAGGGAAGCAGCTGTCATGCTAAAGAAAGCCATTTaGGTTAATTGCCAGTTGATAGCGGCAGCTGAAGCCATATACAGA | + |
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Preference number: 1 (lower is better) Translates to: NKPYREAAVMLKKAI*VNCQLIAAAEAIYR Trigger: TCTGTATATGGCTTCAGCTGCCGCTATCAACTGGCAATTAACTCAAATGGCTTTCTTTAGCATGACAGCTGCTTCCCTGTATGGCTTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGCCACGTGCAACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGAGAAATAAACCTGCCTaGCACAGGCTACTTCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: GAATCNPDLLVGAEQSIMRNKPA*HRLLLH Trigger: GTGCAGAAGTAGCCTGTGGCAGGCAGGTTTATTTCT...CATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR-3UTR GCA 90 bp | ACATTTTGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCGCCACAGGCTACTTCTaGACCTCACTCATACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TFCSRFMDNSFLPICLQTATGYF*TSLIPC Trigger: GCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGC...GGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTGCCACGTGCAACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGGCTTACTGTGGAACTTaGGAAACAGAATCCCATAGT | + |
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Preference number: 2 (lower is better) Translates to: GAATCNPDLLVGAEQSIMAYCGT*ETESHS Trigger: ACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGC...CATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR GCA 72 bp | GCGGCAGCTGAAGCCATATACAGAGGAGCTGCCACGTaGAACCCAGACCTGTTGGTAGGAGCTGAGCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: AAAEAIYRGAAT*NPDLLVGAEQS Trigger: ACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCTCCTCTGTATATGGCTTCAGCTGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR TCA 72 bp | AGCTGCCACGTGCAACCCAGACCTGTTGGTAGGAGCTaGGCAAAGTATAATGATCGTGGATTTCCCATAGAC | + |
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Preference number: 3 (lower is better) Translates to: SCHVQPRPVGRS*AKYNDRGFPID Trigger: GTCTATGGGAAATCCACGATCATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTGCCACGTGCAACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGCATAGACTCGAGCTTTaGGTTTTATGTACATTTTGC | + |
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Preference number: 3 (lower is better) Translates to: GAATCNPDLLVGAEQSIMHRLEL*VLCTFC Trigger: GCAAAATGTACATAAAACCAAAAGCTCGAGTCTATG...CATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR TCA 72 bp | TACAGGGAAGCAGCTGTCATGCTAAAGAAAGCCATTTaGGTTAATTGCCAGTTGATAGCGGCAGCTGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: YREAAVMLKKAI*VNCQLIAAAEA Trigger: GGCTTCAGCTGCCGCTATCAACTGGCAATTAACTCAAATGGCTTTCTTTAGCATGACAGCTGCTTCCCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR GCA 72 bp | TGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTaGCTCCAAACCTGTTGTATTTTTAGTAGCTCGTTC | + |
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Preference number: 3 (lower is better) Translates to: CSRFMDNSFLPI*LQTCCIFSSSF Trigger: GAACGAGCTACTAAAAATACAACAGGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | AGAAATAAACCTGCCTGCCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTCCTGCCCTTGACCCCTaGTCCCCAGGCAGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: RNKPACHRLLLHLTHTLLPALDP*SPGRRA Trigger: TGCTCTCCTGCCTGGGGATCAGGGGTCAAGGGCAGG...AAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCAGGCAGGTTTATTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | TCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCTGTTGTATTAGAAATAGGAGGTGCTaGATCCCGGGGCCGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SRFMDNSFLPICLQTCCIRNRRC*IPGPAG Trigger: GCCAGCCGGCCCCGGGATTCAGCACCTCCTATTTCT...AATACAACAGGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | ACATTTTGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCAGTGATCACCCTTCTTaGAGAGCCCCCGGAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TFCSRFMDNSFLPICLQTSDHPS*RAPGAS Trigger: ACTGGCTCCGGGGGCTCTGCAAGAAGGGTGATCACT...GGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | TGCCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTAGGATGACAGCAGGCAACACTCCTTGTTGCTaGAGTCACCAAACTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: CHRLLLHLTHTLLRMTAGNTPCC*SHQTWS Trigger: ACTCCAAGTTTGGTGACTGCAGCAACAAGGAGTGTT...GCCTGCTGTCATCCTAAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | GGAGCTGCCACGTGCAACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGAGGAACACTCCTTGTTaGTGCAGTCACCAAACTTGG | + |
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Preference number: 4 (lower is better) Translates to: GAATCNPDLLVGAEQSIMRNTPC*CSHQTW Trigger: CCAAGTTTGGTGACTGCAGCAACAAGGAGTGTTCCT...CATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | TGCCAGTTGATAGCGGCAGCTGAAGCCATATACAGAGGAGCTGCCACGTGCAACAACACAAACGTGGCGTaGACACAGACATTACCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CQLIAAAEAIYRGAATCNNTNVA*TQTLPN Trigger: GTTTGGTAATGTCTGTGTGCACGCCACGTTTGTGTT...GTTGCACGTGGCAGCTCCTCTGTATATGGCTTCAGCTGCCGCTATCAACTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | AGAAATAAACCTGCCTGCCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTGAGGACCTGCGTCCTTaGAGAAACCTTGGTCATACC | + |
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Preference number: 4 (lower is better) Translates to: RNKPACHRLLLHLTHTLLEDLRP*RNLGHT Trigger: GGTATGACCAAGGTTTCTGCAAGGACGCAGGTCCTC...AAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCAGGCAGGTTTATTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | AACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGATCGTGGATTTCCCAAATCCCGGGGCCGGCTaGCAAGCTACAGTGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: NPDLLVGAEQSIMIVDFPNPGAG*QATVSK Trigger: TTTGCTCACTGTAGCTTGCCAGCCGGCCCCGGGATT...TGGGAAATCCACGATCATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | ACATTTTGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCACTCAGGCATCCTGGTaGGGTCATACTGGTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TFCSRFMDNSFLPICLQTTQASW*GHTGAG Trigger: TCCTGCACCAGTATGACCTCACCAGGATGCCTGAGT...GGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | TGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTCCTGCCCGGAGCCAGTGCTTaGATACCACCATCTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: CGTWETESHSKTIEHLLLPGASA*IPPSSP Trigger: GGGAGAAGATGGTGGTATGCAAGCACTGGCTCCGGG...CAGGAGAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | TGTACATTTTGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAGAGCAGGCACTCTGTTaGGGATGGGGGTTTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: CTFCSRFMDNSFLPICLQEQALC*GWGFPS Trigger: GCTTGGAAACCCCCATCCCCAACAGAGTGCCTGCTC...TTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAAATGTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | TGCCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTAGGATGACAGCAGGCTTTGCTCCCGTTTTATaGATAACTCGTTCCTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: CHRLLLHLTHTLLRMTAGFAPVL*ITRSCQ Trigger: TTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAA...GCCTGCTGTCATCCTAAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | AACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGATCGTGGATTTCCCAGACAGTCCTGGGACTTaGAAGCTGGCTTCACATGGA | + |
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Preference number: 4 (lower is better) Translates to: NPDLLVGAEQSIMIVDFPDSPGT*KLASHG Trigger: TCCATGTGAAGCCAGCTTTCAAGTCCCAGGACTGTC...TGGGAAATCCACGATCATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | AACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGATCGTGGATTTCCCAGTTGATAGCGGCAGCTaGAGCCATATACAGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: NPDLLVGAEQSIMIVDFPVDSGS*SHIQRS Trigger: GCTCCTCTGTATATGGCTTCAGCTGCCGCTATCAAC...TGGGAAATCCACGATCATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | GCTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTAGCCCCCGGAGCCAGTaGTTGCATACCACCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: AYCGTWETESHSKTIEHLSPRSQ*LHTTIF Trigger: GAAGATGGTGGTATGCAAGCACTGGCTCCGGGGGCT...AAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | TGTACATTTTGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAGCCACAGGCTACTTCTaGACCTCACTCATACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: CTFCSRFMDNSFLPICLQATGYF*TSLIPC Trigger: GCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGC...TTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAAATGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | TGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTCCTGAGAGGAGCTGCCACGTaGAACCCAGACCTGTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: CGTWETESHSKTIEHLLLRGAAT*NPDLLV Trigger: TACCAACAGGTCTGGGTTGCACGTGGCAGCTCCTCT...CAGGAGAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | TCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCTGTTGTATTGCACTCTGTTGGGGATaGGGGTTTCCAAGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: SRFMDNSFLPICLQTCCIALCWG*GFPSFH Trigger: GTGGAAGCTTGGAAACCCCCATCCCCAACAGAGTGC...AATACAACAGGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| 3UTR CAA 72 bp | ATATACAGAGGAGCTGCCACGTGCAACCCAGACCTGTaGGTAGGAGCTGAGCAAAGTATAATGATCGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: IYRGAATCNPDL*VGAEQSIMIVD Trigger: ATCCACGATCATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCTCCTCTGTATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | AACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGATCGTGGATTTCCCAATACCCTGCTTAGGATaGCAGCAGGCTTACTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: NPDLLVGAEQSIMIVDFPIPCLG*QQAYCG Trigger: TCCACAGTAAGCCTGCTGTCATCCTAAGCAGGGTAT...TGGGAAATCCACGATCATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | AGAAATAAACCTGCCTGCCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTTCGTTCCTGCCAATCTaGCTCCAAACCTGTTGTATT | + |
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Preference number: 4 (lower is better) Translates to: RNKPACHRLLLHLTHTLLSFLPI*LQTCCI Trigger: AATACAACAGGTTTGGAGGCAGATTGGCAGGAACGA...AAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCAGGCAGGTTTATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | GCTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCATATACAGAGGAGCTaGCACGTGCAACCCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: AYCGTWETESHSKTIEHLHIQRS*HVQPRP Trigger: AGGTCTGGGTTGCACGTGGCAGCTCCTCTGTATATG...AAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | TCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCTGTTGTATTTACCAAGGACAGTCCTaGGACTTGAAAGCTGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SRFMDNSFLPICLQTCCIYQGQS*DLKAGF Trigger: GAAGCCAGCTTTCAAGTCCCAGGACTGTCCTTGGTA...AATACAACAGGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | GCTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTGAAGTTGCACACAGCTaGGGCCGACTTGCTTATCTT | + |
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Preference number: 4 (lower is better) Translates to: AYCGTWETESHSKTIEHLEVAHS*GRLAYL Trigger: AAGATAAGCAAGTCGGCCTCAGCTGTGTGCAACTTC...AAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | TCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCTGTTGTATTAGAAATAAACCTGCCTaGCACAGGCTACTTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SRFMDNSFLPICLQTCCIRNKPA*HRLLLH Trigger: GTGCAGAAGTAGCCTGTGGCAGGCAGGTTTATTTCT...AATACAACAGGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | AGAAATAAACCTGCCTGCCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTATAACTCCTATCAGTTaGGTCTTACTGTACTTACTG | + |
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Preference number: 4 (lower is better) Translates to: RNKPACHRLLLHLTHTLLITPIS*VLLYLL Trigger: CAGTAAGTACAGTAAGACTCAACTGATAGGAGTTAT...AAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCAGGCAGGTTTATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | GCTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTTGGATAACTCGTTCCTaGCAATCTGCCTCCAAACCT | + |
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Preference number: 4 (lower is better) Translates to: AYCGTWETESHSKTIEHLWITRS*QSASKP Trigger: AGGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCA...AAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | CTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTACCGAACACAAACGTaGCGTGCACACAGACATTAC | + |
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Preference number: 4 (lower is better) Translates to: LTVELGKQNPIVRPLSIFYRTQT*RAHRHY Trigger: GTAATGTCTGTGTGCACGCCACGTTTGTGTTCGGTA...GAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | ACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTCCTCTTACTGTACTTACTaGCATAATGGCCCTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: TVELGKQNPIVRPLSIFSSYCTY*HNGPVA Trigger: TGCCACAGGGCCATTATGCCAGTAAGTACAGTAAGA...GGAGAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | TGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTCCTGACAGCAGGCTTACTGTaGAACTTGGGAAACAGAATC | + |
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Preference number: 4 (lower is better) Translates to: CGTWETESHSKTIEHLLLTAGLL*NLGNRI Trigger: GATTCTGTTTCCCAAGTTCCACAGTAAGCCTGCTGT...CAGGAGAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | CTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCCTCATACTTTGTCCATaGAGACACAGCCACAGGTTA | + |
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Preference number: 4 (lower is better) Translates to: LTVELGKQNPIVRPLSIFLILCP*RHSHRL Trigger: TAACCTGTGGCTGTGTCTTCATGGACAAAGTATGAG...GAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR TCA 90 bp | CTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCCCTGTTGGTAGGAGCTaGGCAAAGTATAATGATCGT | + |
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Preference number: 4 (lower is better) Translates to: LTVELGKQNPIVRPLSIFPVGRS*AKYNDR Trigger: ACGATCATTATACTTTGCTCAGCTCCTACCAACAGG...GAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR GCA 90 bp | GCTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTAGGTTAGCAAAGAGTTaGACAAACCAACCGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: AYCGTWETESHSKTIEHLRLAKS*TNQPQQ Trigger: TTGCTGCGGTTGGTTTGTGCAACTCTTTGCTAACCT...AAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CCA 90 bp | GCTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTGCTTACTGTGGAACTTaGGAAACAGAATCCCATAGT | + |
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Preference number: 4 (lower is better) Translates to: AYCGTWETESHSKTIEHLAYCGT*ETESHS Trigger: ACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGC...AAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | TGCCAGTTGATAGCGGCAGCTGAAGCCATATACAGAGGAGCTGCCACGTGCAACCCCCGGAGCCAGTGCTaGCATACCACCATCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: CQLIAAAEAIYRGAATCNPRSQC*HTTIFS Trigger: GGAGAAGATGGTGGTATGCAAGCACTGGCTCCGGGG...GTTGCACGTGGCAGCTCCTCTGTATATGGCTTCAGCTGCCGCTATCAACTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | TGCCAGTTGATAGCGGCAGCTGAAGCCATATACAGAGGAGCTGCCACGTGCAACCAGGTTAGCAAAGAGTaGCACAAACCAACCGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CQLIAAAEAIYRGAATCNQVSKE*HKPTAA Trigger: TGCTGCGGTTGGTTTGTGCAACTCTTTGCTAACCTG...GTTGCACGTGGCAGCTCCTCTGTATATGGCTTCAGCTGCCGCTATCAACTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | AGAAATAAACCTGCCTGCCACAGGCTACTTCTGCACCTCACTCATACCCTGCTTAGGAAGGAACACTCCTaGTTGCTGCAGTCACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: RNKPACHRLLLHLTHTLLRKEHS*LLQSPN Trigger: GTTTGGTGACTGCAGCAACAAGGAGTGTTCCTTCCT...AAGCAGGGTATGAGTGAGGTGCAGAAGTAGCCTGTGGCAGGCAGGTTTATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | TGTACATTTTGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAAGAGCAGGCACTCTGTaGGGGATGGGGGTTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: CTFCSRFMDNSFLPICLQRAGTL*GMGVSK Trigger: CTTGGAAACCCCCATCCCCAACAGAGTGCCTGCTCT...TTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAAATGTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | ACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTCCGGACAGTCCTGGGACTaGAAAGCTGGCTTCACATGG | + |
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Preference number: 5 (lower is better) Translates to: TVELGKQNPIVRPLSIFSGQSWD*KAGFTW Trigger: CCATGTGAAGCCAGCTTTCAAGTCCCAGGACTGTCC...GGAGAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | GGAGCTGCCACGTGCAACCCAGACCTGTTGGTAGGAGCTGAGCAAAGTATAATGCCGACTTGCTTATCTTaGCATGTTACCGAACACAAA | + |
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Preference number: 5 (lower is better) Translates to: GAATCNPDLLVGAEQSIMPTCLS*HVTEHK Trigger: TTTGTGTTCGGTAACATGCAAAGATAAGCAAGTCGG...CATTATACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCACGTGGCAGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | ACATTTTGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCAGAGGACCTGCGTCCTaGCAGAAACCTTGGTCATAC | + |
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Preference number: 5 (lower is better) Translates to: TFCSRFMDNSFLPICLQTRGPAS*QKPWSY Trigger: GTATGACCAAGGTTTCTGCAAGGACGCAGGTCCTCT...GGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS CCA 90 bp | TGTTACCGAACACAAACGTGGCGTGCACACAGACATTACCAAACCTaGGCTCATACTTTGTCCATGAAGACACAGCCACAGGTTAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: CYRTQTWRAHRHYQT*AHTLSMKTQPQVSK Trigger: TTTGCTAACCTGTGGCTGTGTCTTCATGGACAAAGTATGAGCCCAGGTTTGGTAATGTCTGTGTGCACGCCACGTTTGTGTTCGGTAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | ACATTTTGCTCCCGTTTTATGGATAACTCGTTCCTGCCAATCTGCCTCCAAACCACAGCTGAGGCCGACTaGCTTATCTTTGCATGTTAC | + |
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Preference number: 5 (lower is better) Translates to: TFCSRFMDNSFLPICLQTTAEAD*LIFACY Trigger: GTAACATGCAAAGATAAGCAAGTCGGCCTCAGCTGT...GGTTTGGAGGCAGATTGGCAGGAACGAGTTATCCATAAAACGGGAGCAAAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | CTTACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTGCAACCCAGACCTGTaGGTAGGAGCTGAGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: LTVELGKQNPIVRPLSIFCNPDL*VGAEQS Trigger: ACTTTGCTCAGCTCCTACCAACAGGTCTGGGTTGCA...GAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | ACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTCCAAGGAACACTCCTTGTaGCTGCAGTCACCAAACTTG | + |
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Preference number: 5 (lower is better) Translates to: TVELGKQNPIVRPLSIFSKEHSL*LQSPNL Trigger: CAAGTTTGGTGACTGCAGCAACAAGGAGTGTTCCTT...GGAGAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS-3UTR CAA 90 bp | ACTGTGGAACTTGGGAAACAGAATCCCATAGTAAGACCATTGAGCATCTTCTCCCATAGACTCGAGCTTTaGGTTTTATGTACATTTTGC | + |
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Preference number: 5 (lower is better) Translates to: TVELGKQNPIVRPLSIFSHRLEL*VLCTFC Trigger: GCAAAATGTACATAAAACCAAAAGCTCGAGTCTATG...GGAGAAGATGCTCAATGGTCTTACTATGGGATTCTGTTTCCCAAGTTCCACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS GCA 72 bp | GCAAAGGTGAACCGCTCTAGCCCCGCAATGACCTCTTaGATCTTCCGTCTCCTGCTGGGGCTGCGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: AKVNRSSPAMTS*IFRLLLGLRKL Trigger: CAGCTTCCGCAGCCCCAGCAGGAGACGGAAGATGCAAGAGGTCATTGCGGGGCTAGAGCGGTTCACCTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000344935.8 |
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| CDS CAA 90 bp | GCTCATACTTTGTCCATGAAGACACAGCCACAGGTTAGCAAAGAGTaGCACAAACCAACCGCAGCAAGGCTGTTATTCTGCCAGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AHTLSMKTQPQVSKE*HKPTAARLLFCQSW Trigger: CCAGCTCTGGCAGAATAACAGCCTTGCTGCGGTTGGTTTGTGCAACTCTTTGCTAACCTGTGGCTGTGTCTTCATGGACAAAGTATGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS TCA 72 bp | GAAGCAACGCTTAGATCTTGCTTCCAGGCAGCAGCTTaGATTCCCGAATCTTCTGAGCAAATTGGCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: EATLRSCFQAAA*IPESSEQIGTW Trigger: CCAAGTGCCAATTTGCTCAGAAGATTCGGGAATTCAAGCTGCTGCCTGGAAGCAAGATCTAAGCGTTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344935.8 |
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| CDS CAA 72 bp | TTGTCCATGAAGACACAGCCACAGGTTAGCAAAGAGTaGCACAAACCAACCGCAGCAAGGCTGTTATTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSMKTQPQVSKE*HKPTAARLLFC Trigger: GCAGAATAACAGCCTTGCTGCGGTTGGTTTGTGCAACTCTTTGCTAACCTGTGGCTGTGTCTTCATGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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| CDS CAA 90 bp | GCATCTTCTCCTGACCATAGGTTAGTTTTTAATAACTCCTATCAGTaGAGTCTTACTGTACTTACTGGCATAATGGCCCTGTGGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: ASSPDHRLVFNNSYQ*SLTVLTGIMALWHR Trigger: CCTGTGCCACAGGGCCATTATGCCAGTAAGTACAGTAAGACTCAACTGATAGGAGTTATTAAAAACTAACCTATGGTCAGGAGAAGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000397671.1 |
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