RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000021826

Ensembl transcript IDs: ENST00000233072.10, ENST00000430249.7, ENST00000451903.3, ENST00000467353.1, ENST00000479988.1, ENST00000497121.1, ENST00000619804.1, ENST00000645825.1, ENST00000671984.1, ENST00000673510.1, ENST00000673630.1, ENST00000673698.1, ENST00000673711.1, ENST00000674074.1

Found 1162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTAATCAATTTTCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTaGGACGGCCATGCCACTGGGGTGGCAGGGACATTGTTGGCGTTG +
Preference number: 1 (lower is better)
Translates to: LINFLMEERLGFCPS*DGHATGVAGTLLAL
Trigger: CAACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGAAAATTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR GCA 90 bp CAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTaGGAGATTTCTGCACAGCTTCAGCAAAAAGTTTGGTCACCTGAA +
Preference number: 1 (lower is better)
Translates to: QHCTACSGKDSWSPP*EISAQLQQKVWSPE
Trigger: TTCAGGTGACCAAACTTTTTGCTGAAGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR TCA 90 bp GGTATCTTAAATCCTGTGGAAAGCATTGCCTTTAGGAAGGCTGTATaGATACCTTCACCAAAGCAAGCCACCTCTCCAGTGGAAGCCATC +
Preference number: 1 (lower is better)
Translates to: GILNPVESIAFRKAV*IPSPKQATSPVEAI
Trigger: GATGGCTTCCACTGGAGAGGTGGCTTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAAGGCAATGCTTTCCACAGGATTTAAGATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 90 bp AATCTTGGCCGGAATGATTGCTGGATGCCTATCAGGATGCCTTTCTaGGGTATCTTAAATCCTGTGGAAAGCATTGCCTTTAGGAAGGCT +
Preference number: 1 (lower is better)
Translates to: NLGRNDCWMPIRMPF*GILNPVESIAFRKA
Trigger: AGCCTTCCTAAAGGCAATGCTTTCCACAGGATTTAAGATACCCCAGAAAGGCATCCTGATAGGCATCCAGCAATCATTCCGGCCAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR TCA 90 bp GGTTGTTCTTTGCTTGTAGTGAGGCAGAGGGTCTTTCTCCAACTTTaGGTGCTCAGCAAACTGACCATGAGTTCTGAATCCTCAAGTATA +
Preference number: 1 (lower is better)
Translates to: GCSLLVVRQRVFLQL*VLSKLTMSSESSSI
Trigger: TATACTTGAGGATTCAGAACTCATGGTCAGTTTGCTGAGCACTCAAAGTTGGAGAAAGACCCTCTGCCTCACTACAAGCAAAGAACAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 90 bp AATCACCAAGACATCATTTCCTTTGACAAGAAATTGGACGTTGAATaGACCAGAGATGGCAAAAGCCTTTGCAATCTTCCGGGTAGCATC +
Preference number: 1 (lower is better)
Translates to: NHQDIISFDKKLDVE*TRDGKSLCNLPGSI
Trigger: GATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTTGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 90 bp CTTAATTGCAACATAGTCAGCAGGAATTATGGGATGGTCCAATGTTaGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGT +
Preference number: 1 (lower is better)
Translates to: LNCNIVSRNYGMVQC*KMFLINILSNHHLG
Trigger: ACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACATTGGACCATCCCATAATTCCTGCTGACTATGTTGCAATTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 90 bp TTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCAT +
Preference number: 1 (lower is better)
Translates to: FNIMGRDNNIPGLAK*VRMRIQKEAIHKHH
Trigger: ATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR CAA 90 bp CCGGGTAGCATCCTTCACCTTTTCAATGGCCCCTTGGCTGATGGTTaGTGTGGGCAGCATCAGAGTGGCATCTCCCGAGTGGACACCTGC +
Preference number: 2 (lower is better)
Translates to: PGSILHLFNGPLADG*CGQHQSGISRVDTC
Trigger: GCAGGTGTCCACTCGGGAGATGCCACTCTGATGCTGCCCACACAAACCATCAGCCAAGGGGCCATTGAAAAGGTGAAGGATGCTACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGAGACGGAAATTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: SDGREAGILSFLRRPCHWRRKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAATTTCCGTCT...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SDGREAGILSFLRRPCHWTCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CAA 90 bp TCTAATCAATTTTCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTaGAGACGGCCATGCCACTGGGGTGGCAGGGACATTGTTGGCGTT +
Preference number: 2 (lower is better)
Translates to: SNQFSDGREAGILSF*RRPCHWGGRDIVGV
Trigger: AACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGAAAATTGATTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTAGACGGAAATTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: VLALTVGGINSAVWDPIVRRKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAATTTCCGTCT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR GCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGCATGGGAGCCTTAATTaGAACATAGTCAGCAGGAAT +
Preference number: 2 (lower is better)
Translates to: SDGREAGILSFLRRPCHWHGSLN*NIVSRN
Trigger: ATTCCTGCTGACTATGTTGCAATTAAGGCTCCCATG...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CCA 90 bp TTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGTTTTCAATGGCCCCTTaGCTGATGGTTTGTGTGGGC +
Preference number: 2 (lower is better)
Translates to: FSSTVLPVVEKTLGVHLAFSMAP*LMVCVG
Trigger: GCCCACACAAACCATCAGCCAAGGGGCCATTGAAAA...CGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGAGTCAGCAGGAATTATaGGATGGTCCAATGTTGGAA +
Preference number: 2 (lower is better)
Translates to: SDGREAGILSFLRRPCHWSQQEL*DGPMLE
Trigger: TTCCAACATTGGACCATCCCATAATTCCTGCTGACT...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VLALTVGGINSAVWDPIVTCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTGGGCAGCATCAGAGTaGCATCTCCCGAGTGGACAC +
Preference number: 2 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGWAASE*HLPSGH
Trigger: GTGTCCACTCGGGAGATGCCACTCTGATGCTGCCCA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp TTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGTGTTCAGAGATGGCATaGGAGATAACCCTTCCATCT +
Preference number: 2 (lower is better)
Translates to: FSSTVLPVVEKTLGVHLACSEMA*EITLPS
Trigger: AGATGGAAGGGTTATCTCTCATGCCATCTCTGAACA...CGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACAATGGCCCCTTGGCTaGTGGTTTGTGTGGGCAGCA +
Preference number: 2 (lower is better)
Translates to: SWISQMGENEDPKRSNTQQWPLG*WFVWAA
Trigger: TGCTGCCCACACAAACCATCAGCCAAGGGGCCATTG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp ATCTCTATGCTGCTTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGCCAGCCTGGAGAGTGTaGCTCCATCTCAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: ISMLLFQHCTACSGKDSWPAWRV*LHLKKK
Trigger: TTTCTTTTTGAGATGGAGTCACACTCTCCAGGCTGG...CCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAAGCAGCATAGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR GCA 90 bp AGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGAGATTTGGAATGATTGCTGGATaGCTATCAGGATGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: STVLPVVEKTLGVHLARFGMIAG*LSGCLS
Trigger: AGAAAGGCATCCTGATAGGCATCCAGCAATCATTCC...AAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCCAGCCTGGAGAGTGTaGCTCCATCTCAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGPAWRV*LHLKKK
Trigger: TTTCTTTTTGAGATGGAGTCACACTCTCCAGGCTGG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTATCGTCTTAAGGGAATaGACCTTACTTCCAAGTTAT +
Preference number: 2 (lower is better)
Translates to: VLALTVGGINSAVWDPIVIVLRE*TLLPSY
Trigger: ATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGAT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAGGAATGGTGTCCTTaGCCTTACAGTGGGTGGAAT +
Preference number: 2 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQKEWCP*PYSGWN
Trigger: ATTCCACCCACTGTAAGGGCAAGGACACCATTCCTT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CCA 90 bp GCCATCTCTAATCAATTTTCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGCCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAA +
Preference number: 2 (lower is better)
Translates to: AISNQFSDGREAGILSFLPGLAK*VRMRIQ
Trigger: TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG...CAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGAAAATTGATTAGAGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAGTGGCATCTCCCGAGTaGACACCTGCATCTTCAACA +
Preference number: 2 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAVASPE*TPASST
Trigger: TGTTGAAGATGCAGGTGTCCACTCGGGAGATGCCAC...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CCA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGGGGATGGTCCAATGTTaGAAGATGTTTCTCATCAAC +
Preference number: 2 (lower is better)
Translates to: SVANSLKPSLCNCSATPRGMVQC*KMFLIN
Trigger: GTTGATGAGAAACATCTTCCAACATTGGACCATCCC...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CAA 90 bp CACTCAATCACCAAGACATCATTTCCTTTGACAAGAAATTGGACGTaGAATGGACCAGAGATGGCAAAAGCCTTTGCAATCTTCCGGGTA +
Preference number: 2 (lower is better)
Translates to: HSITKTSFPLTRNWT*NGPEMAKAFAIFRV
Trigger: TACCCGGAAGATTGCAAAGGCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTTGGTGATTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKTCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAAGACGGAAATTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQRRKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAATTTCCGTCT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAA +
Preference number: 2 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGPGLAK*VRMRIQ
Trigger: TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTCCTTGCCCTTACAGTaGGTGGAATTAATAGTGCAG +
Preference number: 2 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGSLPLQ*VELIVQ
Trigger: CTGCACTATTAATTCCACCCACTGTAAGGGCAAGGA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
3UTR CAA 90 bp AATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTaGGTGGCCACATCAATGAAGTCAACCCCAAGAGTCTTGGAAACA +
Preference number: 2 (lower is better)
Translates to: NVGRCFSSTFSPIIT*VATSMKSTPRVLET
Trigger: TGTTTCCAAGACTCTTGGGGTTGACTTCATTGATGTGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLTCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 2 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 2 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp ATCTCTATGCTGCTTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGATCGTCTTAAGGGAATaGACCTTACTTCCAAGTTAT +
Preference number: 2 (lower is better)
Translates to: ISMLLFQHCTACSGKDSWIVLRE*TLLPSY
Trigger: ATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGAT...CCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAAGCAGCATAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp ATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGTGGCCAACTGACCATGAGTTCTaGATCCTCAAGTATAGGCAT +
Preference number: 2 (lower is better)
Translates to: MLEDVSHQHSLQSSPWWPTDHEF*ILKYRH
Trigger: ATGCCTATACTTGAGGATTCAGAACTCATGGTCAGT...TGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGGTGCTCCTAATCTGTaGTGTAAGAACAAGGTTGTT +
Preference number: 2 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQGAPNL*CKNKVV
Trigger: AACAACCTTGTTCTTACAGCACAGATTAGGAGCACC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNTCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACCAGCCTGGAGAGTGTaGCTCCATCTCAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTPAWRV*LHLKKK
Trigger: TTTCTTTTTGAGATGGAGTCACACTCTCCAGGCTGG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGGGGGAGAGTGTGAATaGCAAAAATCTGATTATTTC +
Preference number: 2 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGGGECE*QKSDYF
Trigger: GAAATAATCAGATTTTTGTCATTCACACTCTCCCCC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
41% GC, longest homopolymer 10 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGTCTTTCTCCAACTTTaGGTGCTCAGCAAACTGACC +
Preference number: 2 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNVFLQL*VLSKLT
Trigger: GGTCAGTTTGCTGAGCACTCAAAGTTGGAGAAAGAC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCCCGAGTGGACACCTaGATCTTCAACATGTTCAGA +
Preference number: 2 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSRVDT*IFNMFR
Trigger: TCTGAACATGTTGAAGATGCAGGTGTCCACTCGGGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTTTGTCAGCACCACTaGGTGCTCCTAATCTGTGCT +
Preference number: 2 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNFCQHH*VLLICA
Trigger: AGCACAGATTAGGAGCACCCAGTGGTGCTGACAAAA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CAA 90 bp CAAGTTACACTCAATCACCAAGACATCATTTCCTTTGACAAGAAATaGGACGTTGAATGGACCAGAGATGGCAAAAGCCTTTGCAATCTT +
Preference number: 2 (lower is better)
Translates to: QVTLNHQDIISFDKK*DVEWTRDGKSLCNL
Trigger: AAGATTGCAAAGGCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTTGGTGATTGAGTGTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCACAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 2 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGATCGTCTTAAGGGAATaGACCTTACTTCCAAGTTAT +
Preference number: 2 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGIVLRE*TLLPSY
Trigger: ATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGAT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATC +
Preference number: 2 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIDGKSL*NLPGSI
Trigger: GATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAA +
Preference number: 2 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNPGLAK*VRMRIQ
Trigger: TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 2 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACAAGAAATTGGACGTTaGATGGACCAGAGATGGCAA +
Preference number: 2 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIQEIGR*MDQRWQ
Trigger: TTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 2 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACTGTCTACCATCTGCTaGTATAGTCCAGAAAACAAA +
Preference number: 2 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQLSTIC*YSPENK
Trigger: TTTGTTTTCTGGACTATATCAGCAGATGGTAGACAG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR TCA 72 bp GCCATGCCACTGGGGTGGCAGGGACATTGTTGGCGTTaGGCCAGTCTGATGTGGCTTCCGTGGCAAACAGCT +
Preference number: 3 (lower is better)
Translates to: AMPLGWQGHCWR*ASLMWLPWQTA
Trigger: AGCTGTTTGCCACGGAAGCCACATCAGACTGGCTCAACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR GCA 72 bp AGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATaGCACTGGGGTGGCAGGGACATTGTTGGCGTTGAG +
Preference number: 3 (lower is better)
Translates to: REAGILSFLRRP*HWGGRDIVGVE
Trigger: CTCAACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 72 bp CCACCTCTCCAGTGGAAGCCATCTCACATCTCAGAATaGGGTCAGCATCCCTCAACCGGGGCCAGGAAAACA +
Preference number: 3 (lower is better)
Translates to: PPLQWKPSHISE*GQHPSTGARKT
Trigger: TGTTTTCCTGGCCCCGGTTGAGGGATGCTGACCCCATTCTGAGATGTGAGATGGCTTCCACTGGAGAGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR TCA 72 bp TTTCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTaGGACGGCCATGCCACTGGGGTGGCAGGGACATTG +
Preference number: 3 (lower is better)
Translates to: FLMEERLGFCPS*DGHATGVAGTL
Trigger: CAATGTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGCCACACCAAGGAATCTaGGCCGGAATGATTGCTGGA +
Preference number: 3 (lower is better)
Translates to: SDGREAGILSFLRRPCHWPHQGI*AGMIAG
Trigger: TCCAGCAATCATTCCGGCCAAGATTCCTTGGTGTGG...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp TTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAAT +
Preference number: 3 (lower is better)
Translates to: FSSTVLPVVEKTLGVHLAKQENR*NLGDGN
Trigger: ATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTT...CGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGAAGGAATGGTGTCCTaGCCCTTACAGTGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQEGMVS*PLQWVE
Trigger: TTCCACCCACTGTAAGGGCAAGGACACCATTCCTTC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
3UTR GCA 72 bp ACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTaGGAGATTTCTGCACAGCTTCAGCAAAAAGTTTGG +
Preference number: 3 (lower is better)
Translates to: TACSGKDSWSPP*EISAQLQQKVW
Trigger: CCAAACTTTTTGCTGAAGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR GCA 72 bp TTGGACGTTGAATGGACCAGAGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATCCTTCACCTTTTCAAT +
Preference number: 3 (lower is better)
Translates to: LDVEWTRDGKSL*NLPGSILHLFN
Trigger: ATTGAAAAGGTGAAGGATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATCTCTGGTCCATTCAACGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 72 bp CGGAATGATTGCTGGATGCCTATCAGGATGCCTTTCTaGGGTATCTTAAATCCTGTGGAAAGCATTGCCTTT +
Preference number: 3 (lower is better)
Translates to: RNDCWMPIRMPF*GILNPVESIAF
Trigger: AAAGGCAATGCTTTCCACAGGATTTAAGATACCCCAGAAAGGCATCCTGATAGGCATCCAGCAATCATTCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGAGAATCGCTTGAACTaGGGAGACGGAAATTGCAGT +
Preference number: 3 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGENRLN*GDGNCS
Trigger: ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAAT +
Preference number: 3 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGKQENR*NLGDGN
Trigger: ATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CAA 90 bp GAGGGATTCCACTATCAACAGCTGTCCTCCGAATCACATAATTATCATGGACAAGGTCTTTCTCCAACTTaGAGTGCTCAGCAAACTGAC +
Preference number: 3 (lower is better)
Translates to: EGFHYQQLSSESHNYHGQGLSPT*SAQQTD
Trigger: GTCAGTTTGCTGAGCACTCAAAGTTGGAGAAAGACC...TTGTCCATGATAATTATGTGATTCGGAGGACAGCTGTTGATAGTGGAATCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTCTCCAATCATCACCTaGGTGGCCACATCAATGAAG +
Preference number: 3 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGSPIIT*VATSMK
Trigger: CTTCATTGATGTGGCCACCAAGGTGATGATTGGAGA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACTTTTCAATGGCCCCTaGGCTGATGGTTTGTGTGGG +
Preference number: 3 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTLFNGP*ADGLCG
Trigger: CCCACACAAACCATCAGCCAAGGGGCCATTGAAAAG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 72 bp GACATCATTTCCTTTGACAAGAAATTGGACGTTGAATaGACCAGAGATGGCAAAAGCCTTTGCAATCTTCCG +
Preference number: 3 (lower is better)
Translates to: DIISFDKKLDVE*TRDGKSLCNLP
Trigger: CGGAAGATTGCAAAGGCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGAAATGATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGCAACTTTTCCTACCTaGATCACCATTAATCAGCAC +
Preference number: 3 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQATFPT*ITINQH
Trigger: GTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTGC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGCAACTTTTCCTACCTaGATCACCATTAATCAGCAC +
Preference number: 3 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGATFPT*ITINQH
Trigger: GTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTGC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CAA 90 bp GTGGCTTCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACAAAGACATCATTTCCTTaGACAAGAAATTGGACGTTG +
Preference number: 3 (lower is better)
Translates to: VASVANSLKPSLCNCSATKTSFP*TRNWTL
Trigger: CAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTT...TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGAAGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp GAGGGATTCCACTATCAACAGCTGTCCTCCGAATCACATAATTATCATGGACAATGGGATGGTCCAATGTaGGAAGATGTTTCTCATCAA +
Preference number: 3 (lower is better)
Translates to: EGFHYQQLSSESHNYHGQWDGPM*EDVSHQ
Trigger: TTGATGAGAAACATCTTCCAACATTGGACCATCCCA...TTGTCCATGATAATTATGTGATTCGGAGGACAGCTGTTGATAGTGGAATCCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp ATCTCTATGCTGCTTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGTGGACAAATTTAGTGTaGTTGTTGGGAAGGTTAATC +
Preference number: 3 (lower is better)
Translates to: ISMLLFQHCTACSGKDSWWTNLV*LLGRLI
Trigger: GATTAACCTTCCCAACAACAACACTAAATTTGTCCA...CCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAAGCAGCATAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGAACAAGGTTGTTCTTaGCTTGTAGTGAGGCAGAGG +
Preference number: 3 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTEQGCS*LVVRQR
Trigger: CCTCTGCCTCACTACAAGCAAAGAACAACCTTGTTC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACCCCTTCAACAAATTTaGTCAGCACCACTGGGTGCT +
Preference number: 3 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIPLQQI*SAPLGA
Trigger: AGCACCCAGTGGTGCTGACAAAATTTGTTGAAGGGG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGCAACTTTTCCTACCTaGATCACCATTAATCAGCAC +
Preference number: 3 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLATFPT*ITINQH
Trigger: GTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTGC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGCAACTTTTCCTACCTaGATCACCATTAATCAGCAC +
Preference number: 3 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDATFPT*ITINQH
Trigger: GTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTGC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAATAACCCTTCCATCTTaGCCAACAGCGTCCATTTCT +
Preference number: 3 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQITLPS*PTASIS
Trigger: AGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTAT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 72 bp ATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAAAAAGAAGCAATACAC +
Preference number: 3 (lower is better)
Translates to: MGRDNNIPGLAK*VRMRIQKEAIH
Trigger: GTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGCAACTTTTCCTACCTaGATCACCATTAATCAGCAC +
Preference number: 3 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQATFPT*ITINQH
Trigger: GTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTGC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAACAAGAAATTGGACGTaGAATGGACCAGAGATGGCA +
Preference number: 3 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFITRNWT*NGPEMA
Trigger: TGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCCTTTGACAAGAAATaGGACGTTGAATGGACCAGA +
Preference number: 3 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSFDKK*DVEWTR
Trigger: TCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CCA 72 bp AACATAGTCAGCAGGAATTATGGGATGGTCCAATGTTaGAAGATGTTTCTCATCAACATTCTCTCCAATCAT +
Preference number: 3 (lower is better)
Translates to: NIVSRNYGMVQC*KMFLINILSNH
Trigger: ATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACATTGGACCATCCCATAATTCCTGCTGACTATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGCTGTAAGAACAAGGTaGTTCTTTGCTTGTAGTGAG +
Preference number: 3 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIAVRTR*FFACSE
Trigger: CTCACTACAAGCAAAGAACAACCTTGTTCTTACAGC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp CCTTGGCTGATGGTTTGTGTGGGCAGCATCAGAGTGGCATCTCCCGAGTGGACAGGCGTTGAGCCAGTCTaGTGTGGCTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: PWLMVCVGSIRVASPEWTGVEPV*CGFRGK
Trigger: TTTGCCACGGAAGCCACATCAGACTGGCTCAACGCC...TGTCCACTCGGGAGATGCCACTCTGATGCTGCCCACACAAACCATCAGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CAA 72 bp CTTCCGGGTAGCATCCTTCACCTTTTCAATGGCCCCTaGGCTGATGGTTTGTGTGGGCAGCATCAGAGTGGC +
Preference number: 4 (lower is better)
Translates to: LPGSILHLFNGP*ADGLCGQHQSG
Trigger: GCCACTCTGATGCTGCCCACACAAACCATCAGCCAAGGGGCCATTGAAAAGGTGAAGGATGCTACCCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCTATTGGCCCCGGGGTaGCCTCTGGGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWLLAPG*PLGGTA
Trigger: TGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR GCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGGATGCAGCCACCACATaGCTCCTGATGGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: SDGREAGILSFLRRPCHWDAATT*LLMVDV
Trigger: GACATCTACCATCAGGAGGCATGTGGTGGCTGCATC...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp TTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGTTCTTGAGACGGCCATaGCACTGGGGTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: FSSTVLPVVEKTLGVHLAFLRRP*HWGGRD
Trigger: GTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAA...CGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCCCCGGGGTGACCTCTaGGTGGAACTGCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWPRGDL*VELHSE
Trigger: TTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGGTGGCATCTCCCGAGTaGACACCTGCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SDGREAGILSFLRRPCHWVASPE*TPASST
Trigger: TGTTGAAGATGCAGGTGTCCACTCGGGAGATGCCAC...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGCCATGCCACTGGGGTaGCAGGGACATTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVAMPLG*QGHCWR
Trigger: ACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
3UTR CAA 72 bp ATCCTTCACCTTTTCAATGGCCCCTTGGCTGATGGTTaGTGTGGGCAGCATCAGAGTGGCATCTCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: ILHLFNGPLADG*CGQHQSGISRV
Trigger: CACTCGGGAGATGCCACTCTGATGCTGCCCACACAAACCATCAGCCAAGGGGCCATTGAAAAGGTGAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
3UTR CAA 72 bp TTTTCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTaGAGACGGCCATGCCACTGGGGTGGCAGGGACATT +
Preference number: 4 (lower is better)
Translates to: FSDGREAGILSF*RRPCHWGGRDI
Trigger: AATGTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGTTGTCTGGGCCTCAGTaGGCCCAAGGCATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SDGREAGILSFLRRPCHWLSGPQ*AQGILK
Trigger: TTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAA...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGGTCTTCTTGCCAAGTTaGCGCAGTGTGCGGATACTA +
Preference number: 4 (lower is better)
Translates to: SDGREAGILSFLRRPCHWVFLPS*RSVRIL
Trigger: TAGTATCCGCACACTGCGTCAACTTGGCAAGAAGAC...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGGCGTTGAGCCAGTCTaGTGTGGCTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVGVEPV*CGFRGK
Trigger: TTTGCCACGGAAGCCACATCAGACTGGCTCAACGCC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGGTCTGCTGCCTTCAGTaGATCCTCAATCGATTCCAC +
Preference number: 4 (lower is better)
Translates to: SDGREAGILSFLRRPCHWVCCLQ*ILNRFH
Trigger: GTGGAATCGATTGAGGATGCACTGAAGGCAGCAGAC...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp CCTTGGCTGATGGTTTGTGTGGGCAGCATCAGAGTGGCATCTCCCGAGTGGACATGCATTCACCCACAATaGCCAAGTGGCGAACAACAT +
Preference number: 4 (lower is better)
Translates to: PWLMVCVGSIRVASPEWTCIHPQ*PSGEQH
Trigger: ATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCA...TGTCCACTCGGGAGATGCCACTCTGATGCTGCCCACACAAACCATCAGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGGGGTGACCTCTGGGTaGAACTGCACAGCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVGVTSG*NCTAKK
Trigger: CTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCTCAGCTCCCTTGTCTaGGCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWLSSLV*ASVSPR
Trigger: CCTTGGGCTCACTGAGGCCCAGACAAGGGAGCTGAG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGTGGGCAGCATCAGAGTaGCATCTCCCGAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: FSSTVLPVVEKTLGVHLAWAASE*HLPSGH
Trigger: GTGTCCACTCGGGAGATGCCACTCTGATGCTGCCCA...CGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp CCTTGGCTGATGGTTTGTGTGGGCAGCATCAGAGTGGCATCTCCCGAGTGGACACAAGAAATTGGACGTTaGATGGACCAGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: PWLMVCVGSIRVASPEWTQEIGR*MDQRWQ
Trigger: TTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTG...TGTCCACTCGGGAGATGCCACTCTGATGCTGCCCACACAAACCATCAGCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGAAGGAATGGTGTCCTTaGCCTTACAGTGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SDGREAGILSFLRRPCHWKEWCP*PYSGWN
Trigger: ATTCCACCCACTGTAAGGGCAAGGACACCATTCCTT...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp TCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGACGGCCATGCCACTGGCCATTCTTTGTTCATTaGGAGACGGGGAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: SDGREAGILSFLRRPCHWPFFVH*ETGSET
Trigger: GGTTTCACTCCCCGTCTCCCAATGAACAAAGAATGG...CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCTATTGGCCCCGGGGTaGCCTCTGGGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGLLAPG*PLGGTA
Trigger: TGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACTATTGGCCCCGGGGTaGCCTCTGGGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQLLAPG*PLGGTA
Trigger: TGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTAGGAGCCACAACAACTaGGTCACCTGTGTGAACACC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVRSHNN*VTCVNT
Trigger: GGTGTTCACACAGGTGACTCAGTTGTTGTGGCTCCT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGCAATGGCCCCTTGGCTaGTGGTTTGTGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVANSLKPSLCNCSATPRQWPLG*WFVWAA
Trigger: TGCTGCCCACACAAACCATCAGCCAAGGGGCCATTG...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp CCTTGGCTGATGGTTTGTGTGGGCAGCATCAGAGTGGCATCTCCCGAGTGGACAACTGACCATGAGTTCTaGATCCTCAAGTATAGGCAT +
Preference number: 4 (lower is better)
Translates to: PWLMVCVGSIRVASPEWTTDHEF*ILKYRH
Trigger: ATGCCTATACTTGAGGATTCAGAACTCATGGTCAGT...TGTCCACTCGGGAGATGCCACTCTGATGCTGCCCACACAAACCATCAGCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCTCTGTTGGGACAGATaGCTGAGCCTAACCCACCCA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWLCWDR*LSLTHP
Trigger: TGGGTGGGTTAGGCTCAGGCATCTGTCCCAACAGAG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTAACAGCTTTCCAAGGTaGCTGAGCCACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVNSFPR*LSHLQL
Trigger: GAGCTGAAGGTGGCTCAGGCACCTTGGAAAGCTGTT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATGGTTCTGCAAGAGCTaGGTTCCCCGGTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQWFCKS*VPRSSR
Trigger: GCGGGAGGACCGGGGAACCCAGCTCTTGCAGAACCA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTCTCCAGCCTGACCAATaGACAGACCTCCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVLQPDQ*TDLLIL
Trigger: TAGGATCAGGAGGTCTGTCCATTGGTCAGGCTGGAG...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGGAACGGATCATCACTaGGTAGCCAATGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVGTDHH*VANGVC
Trigger: GCAGACACCATTGGCTACCCAGTGATGATCCGTTCC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGCATTGGAGAGTGTCTaGGCAGGAGCCACAACAACT +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVALESV*AGATTT
Trigger: AGTTGTTGTGGCTCCTGCCCAGACACTCTCCAATGC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTAGGTTCAAAACAGGCTaGTGTCTTCCCGGATACGAC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVRFKTG*CLPGYD
Trigger: GTCGTATCCGGGAAGACATCAGCCTGTTTTGAACCT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGAGATTTACACTGCTGCCAATGTaGTATGGACCACAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: STVLPVVEKTLGVHLARFTLLPM*YGPQPS
Trigger: GCTAGGCTGTGGTCCATATCACATTGGCAGCAGTGT...AAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCTCATCCAAGACAGCTaGGAAGATGGAGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWLIQDS*EDGAIL
Trigger: GAGGATCGCTCCATCTTCTCAGCTGTCTTGGATGAG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTGCTTTCCAAGGTGCCTaGGCCACCTTCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSAFQGA*ATFSSS
Trigger: GGATGAGCTGAAGGTGGCTCAGGCACCTTGGAAAGC...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTGGATTCTGTCCTTCTTaGGACGGCCATGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSGFCPS*DGHATG
Trigger: CCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCC...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGAGACGGAAATTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWRRKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAATTTCCGTCT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGGAGAAAAGAGGGGACTaGGAAACTCTAGTCGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSSTVLPVVEKTLGVHLAEKRGD*ETLVAS
Trigger: AGAGGCGACTAGAGTTTCTCAGTCCCCTCTTTTCTC...CGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp GGCATGAGAGATAACCCTTCCATCTTTGCCAACAGCGTCCATTTCTACTTCTCGGTAGCCAATGGTGTCTaGTGCCTTCAGTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: GMRDNPSIFANSVHFYFSVANGV*CLQCIL
Trigger: GAGGATGCACTGAAGGCAGCAGACACCATTGGCTAC...CGAGAAGTAGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTATCTCTCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGCCACCACCGTCTTCTTaGCAAGTTGACGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SVANSLKPSLCNCSATPRPPPSS*QVDAVC
Trigger: GCACACTGCGTCAACTTGGCAAGAAGACGGTGGTGG...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGAACAGCTTTCCAAGGTaGCTGAGCCACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWNSFPR*LSHLQL
Trigger: GAGCTGAAGGTGGCTCAGGCACCTTGGAAAGCTGTT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCTTGGCTGATGGTTTGTGTGGGCAGCATCAGAGTGGCATCTCCCGAGTGGACAGTAGTCCACAGACTTTaGAAATTCCAGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: PWLMVCVGSIRVASPEWTVVHRL*KFQCFI
Trigger: AATGAAGCACTGGAATTTGCAAAGTCTGTGGACTAC...TGTCCACTCGGGAGATGCCACTCTGATGCTGCCCACACAAACCATCAGCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACCCCGGGGTGACCTCTaGGTGGAACTGCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKPRGDL*VELHSE
Trigger: TTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGAGATTTGGAACGGATCATCACTaGGTAGCCAATGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: STVLPVVEKTLGVHLARFGTDHH*VANGVC
Trigger: GCAGACACCATTGGCTACCCAGTGATGATCCGTTCC...AAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp GGCATGAGAGATAACCCTTCCATCTTTGCCAACAGCGTCCATTTCTACTTCTCGTCTGAAACTCGGCATTaGAGAGTGTCTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GMRDNPSIFANSVHFYFSSETRH*RVSGQE
Trigger: CTCCTGCCCAGACACTCTCCAATGCCGAGTTTCAGA...CGAGAAGTAGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTATCTCTCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCTCAGCTCCCTTGTCTaGGCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGLSSLV*ASVSPR
Trigger: CCTTGGGCTCACTGAGGCCCAGACAAGGGAGCTGAG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGAGACAGCTGAGAAGATaGAGCGATCCTCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWRQLRR*SDPQPC
Trigger: ACAGGGCTGAGGATCGCTCCATCTTCTCAGCTGTCT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTTTTTCAATGGCCCCTTaGCTGATGGTTTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVFSMAP*LMVCVG
Trigger: GCCCACACAAACCATCAGCCAAGGGGCCATTGAAAA...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGGCCGGAATGATTGCTaGATGCCTATCAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWGRNDC*MPIRMP
Trigger: AGGCATCCTGATAGGCATCCAGCAATCATTCCGGCC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGTAGCCAGTGGCTTTTaGGGCCAGAGCAGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQVASGF*GQSRAS
Trigger: CGAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTAC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGTGGCCAGCTTTCCAAGGTGCCTaGGCCACCTTCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: MLEDVSHQHSLQSSPWWPAFQGA*ATFSSS
Trigger: GGATGAGCTGAAGGTGGCTCAGGCACCTTGGAAAGC...TGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCAATGGCCCCTTGGCTaGTGGTTTGTGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGQWPLG*WFVWAA
Trigger: TGCTGCCCACACAAACCATCAGCCAAGGGGCCATTG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTGGTGGCCACATCAATaGAGTCAACCCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWWWPHQ*SQPQES
Trigger: AGACTCTTGGGGTTGACTTCATTGATGTGGCCACCA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGGCGTTGAGCCAGTCTaGTGTGGCTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGGVEPV*CGFRGK
Trigger: TTTGCCACGGAAGCCACATCAGACTGGCTCAACGCC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGGATTCTGTCCTTCTTaGGACGGCCATGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQGFCPS*DGHATG
Trigger: CCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCTCTATGCTGCTTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGACGGAAATTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ISMLLFQHCTACSGKDSWRRKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAATTTCCGTCT...CCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAAGCAGCATAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCTCTGTTGGGACAGATaGCTGAGCCTAACCCACCCA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSLCWDR*LSLTHP
Trigger: TGGGTGGGTTAGGCTCAGGCATCTGTCCCAACAGAG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTGGTTCTGCAAGAGCTaGGTTCCCCGGTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDWFCKS*VPRSSR
Trigger: GCGGGAGGACCGGGGAACCCAGCTCTTGCAGAACCA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATGGTTCTGCAAGAGCTaGGTTCCCCGGTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAWFCKS*VPRSSR
Trigger: GCGGGAGGACCGGGGAACCCAGCTCTTGCAGAACCA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTACATCTTGTAGGTTTTaGCACCAGCAGCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVTSCRF*HQQPIL
Trigger: CAGGATTGGCTGCTGGTGCCAAAACCTACAAGATGT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGCCCTCTGTTGGCCATaGACATCTTGTAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWALCWP*TSCRFW
Trigger: CCAAAACCTACAAGATGTCCATGGCCAACAGAGGGC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGATTCTGCCCTCTGTTaGCCATGGACATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWDSALC*PWTSCR
Trigger: CCTACAAGATGTCCATGGCCAACAGAGGGCAGAATC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCCCCGGGGTGACCTCTaGGTGGAACTGCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDPRGDL*VELHSE
Trigger: TTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGTACTCAGTGTCTATTaGCCCCGGGGTGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQVLSVY*PRGDLW
Trigger: CCAGAGGTCACCCCGGGGCCAATAGACACTGAGTAC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACTCAGCTCCCTTGTCTaGGCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKLSSLV*ASVSPR
Trigger: CCTTGGGCTCACTGAGGCCCAGACAAGGGAGCTGAG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACTCAGCTCCCTTGTCTaGGCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLSSLV*ASVSPR
Trigger: CCTTGGGCTCACTGAGGCCCAGACAAGGGAGCTGAG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAGGATCGAGAAGCTCTCAAGTTACACTCAATCACCAAGACATCATTTCCTTTGGCCATGCCACTGGGGTaGCAGGGACATTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: KDREALKLHSITKTSFPLAMPLG*QGHCWR
Trigger: ACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGC...CAAAGGAAATGATGTCTTGGTGATTGAGTGTAACTTGAGAGCTTCTCGATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGCTACTGGAGGCCCCTaGGTGTGGGGAAGTCACAAT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGATGGP*VWGSHN
Trigger: ATTGTGACTTCCCCACACCCAGGGGCCTCCAGTAGC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTCATACTCCATCTTGGTaGAATCATGGTTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVHTPSW*NHGSRE
Trigger: TTCCCTGGAACCATGATTTCACCAAGATGGAGTATG...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTATTGGCCCCGGGGTaGCCTCTGGGTGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLLAPG*PLGGTA
Trigger: TGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAGGAGCCACAACAACTaGGTCACCTGTGTGAACACC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSRSHNN*VTCVNT
Trigger: GGTGTTCACACAGGTGACTCAGTTGTTGTGGCTCCT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCAATCTTTGCAGCAATaGATGCCAATGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWQSLQQ*MPMGSQ
Trigger: CTGGCTACCCATTGGCATTCATTGCTGCAAAGATTG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGCATGAGAGATAACCCTTCCATCTTTGCCAACAGCGTCCATTTCTACTTCTCGCAATCTTTGCAGCAATaGATGCCAATGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GMRDNPSIFANSVHFYFSQSLQQ*MPMGSQ
Trigger: CTGGCTACCCATTGGCATTCATTGCTGCAAAGATTG...CGAGAAGTAGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTATCTCTCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCTCATCCAAGACAGCTaGGAAGATGGAGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSLIQDS*EDGAIL
Trigger: GAGGATCGCTCCATCTTCTCAGCTGTCTTGGATGAG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAGACGGAAATTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSRRKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAATTTCCGTCT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACTCTGTTGGGACAGATaGCTGAGCCTAACCCACCCA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQLCWDR*LSLTHP
Trigger: TGGGTGGGTTAGGCTCAGGCATCTGTCCCAACAGAG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGGGCAAACTGAATGTTaGATTCACCCACAATGCCCA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWGQTEC*IHPQCP
Trigger: TGGGCATTGTGGGTGAATGCAACATTCAGTTTGCCC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTGGCATAGATACGCGTaGTGCTTGGTTCAGACAACT +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWWHRYA*CLVQTT
Trigger: AGTTGTCTGAACCAAGCAGCACGCGTATCTATGCCA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGCATGAGAGATAACCCTTCCATCTTTGCCAACAGCGTCCATTTCTACTTCTCGTGGCATAGATACGCGTaGTGCTTGGTTCAGACAACT +
Preference number: 4 (lower is better)
Translates to: GMRDNPSIFANSVHFYFSWHRYA*CLVQTT
Trigger: AGTTGTCTGAACCAAGCAGCACGCGTATCTATGCCA...CGAGAAGTAGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTATCTCTCATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACCACCACCGTCTTCTTaGCAAGTTGACGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQPPPSS*QVDAVC
Trigger: GCACACTGCGTCAACTTGGCAAGAAGACGGTGGTGG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCCACCACCGTCTTCTTaGCAAGTTGACGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGPPPSS*QVDAVC
Trigger: GCACACTGCGTCAACTTGGCAAGAAGACGGTGGTGG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTGATGCAGCCACCACATaGCTCCTGATGGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSDAATT*LLMVDV
Trigger: GACATCTACCATCAGGAGGCATGTGGTGGCTGCATC...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGAGATTTTCCCGAGTGGACACCTaGATCTTCAACATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: STVLPVVEKTLGVHLARFSRVDT*IFNMFR
Trigger: TCTGAACATGTTGAAGATGCAGGTGTCCACTCGGGA...AAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTCCCGAGTGGACACCTaGATCTTCAACATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWSRVDT*IFNMFR
Trigger: TCTGAACATGTTGAAGATGCAGGTGTCCACTCGGGA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGGAATGATTGCTGGATaGCTATCAGGATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVGMIAG*LSGCLS
Trigger: AGAAAGGCATCCTGATAGGCATCCAGCAATCATTCC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTTCTTGAGACGGCCATaGCACTGGGGTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDFLRRP*HWGGRD
Trigger: GTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTTCTTGAGACGGCCATaGCACTGGGGTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLFLRRP*HWGGRD
Trigger: GTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTCTTGGAGTCCACCTTaGGAGATTTCTGCACAGCTT +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWSWSPP*EISAQL
Trigger: AAGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTGGTTCTGCAAGAGCTaGGTTCCCCGGTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVWFCKS*VPRSSR
Trigger: GCGGGAGGACCGGGGAACCCAGCTCTTGCAGAACCA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGACATCTTGTAGGTTTTaGCACCAGCAGCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWTSCRF*HQQPIL
Trigger: CAGGATTGGCTGCTGGTGCCAAAACCTACAAGATGT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACCCCGGGGTGACCTCTaGGTGGAACTGCACAGCGAA +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTPRGDL*VELHSE
Trigger: TTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTCAAAGTCTCTCTGTTaGGACAGATGCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWSKSLC*DRCLSL
Trigger: TAGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGATACGCGTGCTGCTTaGTTCAGACAACTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVDTRAA*FRQLFS
Trigger: AGAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCAATGGCCTTGGCAATaGCATAGATACGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSQWPWQ*HRYACC
Trigger: GCAGCACGCGTATCTATGCCATTGCCAAGGCCATTG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCTCAGCTCCCTTGTCTaGGCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLLSSLV*ASVSPR
Trigger: CCTTGGGCTCACTGAGGCCCAGACAAGGGAGCTGAG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAGACAGCTGAGAAGATaGAGCGATCCTCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSRQLRR*SDPQPC
Trigger: ACAGGGCTGAGGATCGCTCCATCTTCTCAGCTGTCT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATGGGCAGCATCAGAGTaGCATCTCCCGAGTGGACAC +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKWAASE*HLPSGH
Trigger: GTGTCCACTCGGGAGATGCCACTCTGATGCTGCCCA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTGGCCGGAATGATTGCTaGATGCCTATCAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSGRNDC*MPIRMP
Trigger: AGGCATCCTGATAGGCATCCAGCAATCATTCCGGCC...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGCCATGCCACTGGGGTaGCAGGGACATTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLAMPLG*QGHCWR
Trigger: ACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGAGATTTTTTTGTCAGCACCACTaGGTGCTCCTAATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: STVLPVVEKTLGVHLARFFCQHH*VLLICA
Trigger: AGCACAGATTAGGAGCACCCAGTGGTGCTGACAAAA...AAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCTCATTGGTCTGGACTaGTGCAATGTTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWLIGLD*CNVWVH
Trigger: ATGAACCCAAACATTGCATCAGTCCAGACCAATGAG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCATAATGGACTCAACTaGAGTTCCCAGGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWHNGLN*SSQDFH
Trigger: GTGAAAGTCCTGGGAACTTCAGTTGAGTCCATTATG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCAAAGGCCTTTGTGCTaGGGTCCATCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSQRPLC*GPSKSL
Trigger: GAGAGACTTTGATGGACCTCAGCACAAAGGCCTTTG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTCCATGTTACAGACAGTaGCACAATTGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVPCYRQ*HNCHQH
Trigger: ATGCTGATGACAATTGTGTCACTGTCTGTAACATGG...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGTGGCCAAGGAGCCACAACAACTaGGTCACCTGTGTGAACACC +
Preference number: 4 (lower is better)
Translates to: MLEDVSHQHSLQSSPWWPRSHNN*VTCVNT
Trigger: GGTGTTCACACAGGTGACTCAGTTGTTGTGGCTCCT...TGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGGTACGTCTCAACATCTaGAACTCGGCATTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: SVANSLKPSLCNCSATPRVRLNI*NSALES
Trigger: ACTCTCCAATGCCGAGTTTCAGATGTTGAGACGTAC...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGATGCAGTATTCCATTaGGGTAGGATGAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWDAVFH*GRMKGK
Trigger: TTTGCCCTTCATCCTACCTCAATGGAATACTGCATC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGTAGCCAGTGGCTTTTaGGGCCAGAGCAGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDVASGF*GQSRAS
Trigger: CGAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTAC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCGGCTAGATGTTCCATaGAAACGGTCAAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSRLDVP*KRSRSQ
Trigger: CTGGGATCTTGACCGTTTTCATGGAACATCTAGCCG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGACACTGCTGCCAATGTaGTATGGACCACAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGTLLPM*YGPQPS
Trigger: GCTAGGCTGTGGTCCATATCACATTGGCAGCAGTGT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAATCTGGCCTCCAACTaGTATGATGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSNLASN*YDAATT
Trigger: TGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGCGTTGAGCCAGTCTaGTGTGGCTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDGVEPV*CGFRGK
Trigger: TTTGCCACGGAAGCCACATCAGACTGGCTCAACGCC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTCAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGGTCTTTCTCCAACTTTaGGTGCTCAGCAAACTGACC +
Preference number: 4 (lower is better)
Translates to: SVANSLKPSLCNCSATPRVFLQL*VLSKLT
Trigger: GGTCAGTTTGCTGAGCACTCAAAGTTGGAGAAAGAC...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAACCTCTGGGTGGAACTaGACAGCGAAGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQTSGWN*TAKKGL
Trigger: CAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACCCATCTGGCTGTTCTaGCTTGATGACCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQPIWLF*LDDLCD
Trigger: GTCACAGAGGTCATCAAGGCAGAACAGCCAGATGGG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACTCTGTTGGGACAGATaGCTGAGCCTAACCCACCCA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLCWDR*LSLTHP
Trigger: TGGGTGGGTTAGGCTCAGGCATCTGTCCCAACAGAG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACCACCACCGTCTTCTTaGCAAGTTGACGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQPPPSS*QVDAVC
Trigger: GCACACTGCGTCAACTTGGCAAGAAGACGGTGGTGG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGATGCAGCCACCACATaGCTCCTGATGGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQDAATT*LLMVDV
Trigger: GACATCTACCATCAGGAGGCATGTGGTGGCTGCATC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTCTTGAGACGGCCATaGCACTGGGGTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNFLRRP*HWGGRD
Trigger: GTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATTCTTGAGACGGCCATaGCACTGGGGTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQFLRRP*HWGGRD
Trigger: GTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTTCTTGAGACGGCCATaGCACTGGGGTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMFLRRP*HWGGRD
Trigger: GTCCCTGCCACCCCAGTGGCATGGCCGTCTCAAGAA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTATCTTGGTGAAATCATaGTTCCAGGGAACTAAGTGC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVILVKS*FQGTKC
Trigger: GCACTTAGTTCCCTGGAACCATGATTTCACCAAGAT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGGAACGGATCATCACTaGGTAGCCAATGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGGTDHH*VANGVC
Trigger: GCAGACACCATTGGCTACCCAGTGATGATCCGTTCC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATCTGAAACTCGGCATTaGAGAGTGTCTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQSETRH*RVSGQE
Trigger: CTCCTGCCCAGACACTCTCCAATGCCGAGTTTCAGA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCCCACAATGCCCAAGTaGCGAACAACATTGATTGAA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWPTMPK*RTTLIE
Trigger: TTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCCTTCTATAGATGGGTaGCACATCCGTAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWPSIDG*HIRKAF
Trigger: GAAAGCTTTACGGATGTGCCACCCATCTATAGAAGG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGATACGCGTGCTGCTTaGTTCAGACAACTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWDTRAA*FRQLFS
Trigger: AGAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGTGGCATCTCCCGAGTaGACACCTGCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGVASPE*TPASST
Trigger: TGTTGAAGATGCAGGTGTCCACTCGGGAGATGCCAC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTTTTCAATGGCCCCTTaGCTGATGGTTTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSFSMAP*LMVCVG
Trigger: GCCCACACAAACCATCAGCCAAGGGGCCATTGAAAA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGCCATGCCACTGGGGTaGCAGGGACATTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMAMPLG*QGHCWR
Trigger: ACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGCCATGCCACTGGGGTaGCAGGGACATTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQAMPLG*QGHCWR
Trigger: ACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR CAA 72 bp CTTCATTGTGTAATTGTTCAGCCACACCAAGGAATCTaGGCCGGAATGATTGCTGGATGCCTATCAGGATGC +
Preference number: 4 (lower is better)
Translates to: LHCVIVQPHQGI*AGMIAGCLSGC
Trigger: GCATCCTGATAGGCATCCAGCAATCATTCCGGCCAAGATTCCTTGGTGTGGCTGAACAATTACACAATGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGACCTCTGTGACAAACTaGGGGGTGATGGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGTSVTN*GVMGRK
Trigger: CTTTCTTCCCATCACCCCTCAGTTTGTCACAGAGGT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GTGGCTTCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACATAATGGACTCAACTaGAGTTCCCAGGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: VASVANSLKPSLCNCSATHNGLN*SSQDFH
Trigger: GTGAAAGTCCTGGGAACTTCAGTTGAGTCCATTATG...TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGAAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGTAGCCAGTGGCTTTTaGGGCCAGAGCAGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMVASGF*GQSRAS
Trigger: CGAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTAC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGTAGCCAGTGGCTTTTaGGGCCAGAGCAGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVVASGF*GQSRAS
Trigger: CGAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTAC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGAGGTTCAAAACAGGCTaGTGTCTTCCCGGATACGAC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGRFKTG*CLPGYD
Trigger: GTCGTATCCGGGAAGACATCAGCCTGTTTTGAACCT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACGGCTAGATGTTCCATaGAAACGGTCAAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQRLDVP*KRSRSQ
Trigger: CTGGGATCTTGACCGTTTTCATGGAACATCTAGCCG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACTCATCCAAGACAGCTaGGAAGATGGAGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLIQDS*EDGAIL
Trigger: GAGGATCGCTCCATCTTCTCAGCTGTCTTGGATGAG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGCTTTCCAAGGTGCCTaGGCCACCTTCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNAFQGA*ATFSSS
Trigger: GGATGAGCTGAAGGTGGCTCAGGCACCTTGGAAAGC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGCTTTCCAAGGTGCCTaGGCCACCTTCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQAFQGA*ATFSSS
Trigger: GGATGAGCTGAAGGTGGCTCAGGCACCTTGGAAAGC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCAATGGCCCCTTGGCTaGTGGTTTGTGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVQWPLG*WFVWAA
Trigger: TGCTGCCCACACAAACCATCAGCCAAGGGGCCATTG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCAATGGCCCCTTGGCTaGTGGTTTGTGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMQWPLG*WFVWAA
Trigger: TGCTGCCCACACAAACCATCAGCCAAGGGGCCATTG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGGCGTTGAGCCAGTCTaGTGTGGCTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVGVEPV*CGFRGK
Trigger: TTTGCCACGGAAGCCACATCAGACTGGCTCAACGCC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGGCGTTGAGCCAGTCTaGTGTGGCTTCCGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNGVEPV*CGFRGK
Trigger: TTTGCCACGGAAGCCACATCAGACTGGCTCAACGCC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGGATTCTGTCCTTCTTaGGACGGCCATGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVGFCPS*DGHATG
Trigger: CCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGGATTCTGTCCTTCTTaGGACGGCCATGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQGFCPS*DGHATG
Trigger: CCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSTCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGACGGAAATTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQRRKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAATTTCCGTCT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTTCCAGGACAATGTGTaGTGTCTGTGCCTTGACAGA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSFQDNV*CLCLDR
Trigger: TCTGTCAAGGCACAGACAGCACACATTGTCCTGGAA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACTGTCTGGCCACCCATaGCCAGAATTAACCCATCTG +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLSGHP*PELTHL
Trigger: CAGATGGGTTAATTCTGGGCATGGGTGGCCAGACAG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGCTCAATCGATTCCACTaGAAAACTTGGAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: FSSTVLPVVEKTLGVHLALNRFH*KTWSNL
Trigger: AAGATTGCTCCAAGTTTTGCAGTGGAATCGATTGAG...CGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGTAGCCAATGGTGTCTaGTGCCTTCAGTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQVANGV*CLQCIL
Trigger: GAGGATGCACTGAAGGCAGCAGACACCATTGGCTAC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTGCATTCACCCACAATaGCCAAGTGGCGAACAACAT +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSCIHPQ*PSGEQH
Trigger: ATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGCATAGATACGCGTGCTaGTTGGTTCAGACAACTCTT +
Preference number: 4 (lower is better)
Translates to: SVANSLKPSLCNCSATPRHRYAC*LVQTTL
Trigger: AAGAGTTGTCTGAACCAAGCAGCACGCGTATCTATG...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCCACCACCGTCTTCTTaGCAAGTTGACGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDPPPSS*QVDAVC
Trigger: GCACACTGCGTCAACTTGGCAAGAAGACGGTGGTGG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGATGCAGCCACCACATaGCTCCTGATGGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQDAATT*LLMVDV
Trigger: GACATCTACCATCAGGAGGCATGTGGTGGCTGCATC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAAACAAAGGGGAAGGATCGAGAAGCTCTCAAGTTACACTCAATCACCAAGACATCTTGGAGTCCACCTTaGGAGATTTCTGCACAGCTT +
Preference number: 4 (lower is better)
Translates to: ETKGKDREALKLHSITKTSWSPP*EISAQL
Trigger: AAGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGA...TGTCTTGGTGATTGAGTGTAACTTGAGAGCTTCTCGATCCTTCCCCTTTGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAACCAGCAACAGAGGATaGATGGCCAAAGGAGTAACC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQTSNRG*MAKGVT
Trigger: GGTTACTCCTTTGGCCATCCATCCTCTGTTGCTGGT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGGGGTGACCTCTGGGTaGAACTGCACAGCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQGVTSG*NCTAKK
Trigger: CTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGGGGTGACCTCTGGGTaGAACTGCACAGCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNGVTSG*NCTAKK
Trigger: CTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGTACTCAGTGTCTATTaGCCCCGGGGTGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNVLSVY*PRGDLW
Trigger: CCAGAGGTCACCCCGGGGCCAATAGACACTGAGTAC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGTACTCAGTGTCTATTaGCCCCGGGGTGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTVLSVY*PRGDLW
Trigger: CCAGAGGTCACCCCGGGGCCAATAGACACTGAGTAC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACTCCAGCCTGACCAATaGACAGACCTCCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKLQPDQ*TDLLIL
Trigger: TAGGATCAGGAGGTCTGTCCATTGGTCAGGCTGGAG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAATCACTGGGTAGCCAATaGTGTCTGCTGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQSLGSQ*CLLPSV
Trigger: CACTGAAGGCAGCAGACACCATTGGCTACCCAGTGA...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATCACTGGGTAGCCAATaGTGTCTGCTGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKSLGSQ*CLLPSV
Trigger: CACTGAAGGCAGCAGACACCATTGGCTACCCAGTGA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTCAAAGTCTCTCTGTTaGGACAGATGCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSSKSLC*DRCLSL
Trigger: TAGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGTTCTCCACCAGAATTTaGTTGGTCATAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: SVANSLKPSLCNCSATPRFSTRI*LVIAKA
Trigger: GGCCTTTGCTATGACCAACCAAATTCTGGTGGAGAA...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp GTGGCTTCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCTTCTATAGATGGGTaGCACATCCGTAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: VASVANSLKPSLCNCSATPSIDG*HIRKAF
Trigger: GAAAGCTTTACGGATGTGCCACCCATCTATAGAAGG...TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGAAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTGTCATCAATGGCCTTaGCAATGGCATAGATACGCG +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSCHQWP*QWHRYA
Trigger: CGCGTATCTATGCCATTGCCAAGGCCATTGATGACA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATACTCAGCTCCCTTGTCTaGGCCTCAGTGAGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKILSSLV*ASVSPR
Trigger: CCTTGGGCTCACTGAGGCCCAGACAAGGGAGCTGAG...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGAGGTTGTTTGGAATCTaGCCTCCAACTGATATGATG +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWRLFGI*PPTDMM
Trigger: CATCATATCAGTTGGAGGCCAGATTCCAAACAACCT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGACAGCTGAGAAGATaGAGCGATCCTCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQRQLRR*SDPQPC
Trigger: ACAGGGCTGAGGATCGCTCCATCTTCTCAGCTGTCT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGTGGCATCTCCCGAGTaGACACCTGCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQVASPE*TPASST
Trigger: TGTTGAAGATGCAGGTGTCCACTCGGGAGATGCCAC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTTTTCAATGGCCCCTTaGCTGATGGTTTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGFSMAP*LMVCVG
Trigger: GCCCACACAAACCATCAGCCAAGGGGCCATTGAAAA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGAGTCAGCAGGAATTATaGGATGGTCCAATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWSQQEL*DGPMLE
Trigger: TTCCAACATTGGACCATCCCATAATTCCTGCTGACT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGATCAGGATGCCTTTCTaGGGTATCTTAAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWIRMPF*GILNPV
Trigger: CACAGGATTTAAGATACCCCAGAAAGGCATCCTGAT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGCCATGCCACTGGGGTaGCAGGGACATTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLAMPLG*QGHCWR
Trigger: ACGCCAACAATGTCCCTGCCACCCCAGTGGCATGGC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTGGCTTCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACATCCTTGCCCTTACAGTaGGTGGAATTAATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VASVANSLKPSLCNCSATSLPLQ*VELIVQ
Trigger: CTGCACTATTAATTCCACCCACTGTAAGGGCAAGGA...TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGAAGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAGGCCCCTGGGTGTaGGGAAGTCACAATAGACTT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDGGPWV*GSHNRL
Trigger: AAGTCTATTGTGACTTCCCCACACCCAGGGGCCTCC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACTGACTGGTGGGGCTTaGGTCACGTGCCTGTGTCTA +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQLTGGA*VTCLCL
Trigger: TAGACACAGGCACGTGACCCAAGCCCCACCAGTCAG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTTAAGTTTCCTGTACTaGTTCCAAACAATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWLSFLY*FQTMAP
Trigger: AGGAGCCATTGTTTGGAATCAGTACAGGAAACTTAA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATAGGAGCCACAACAACTaGGTCACCTGTGTGAACACC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDRSHNN*VTCVNT
Trigger: GGTGTTCACACAGGTGACTCAGTTGTTGTGGCTCCT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGTACGTCTCAACATCTaGAACTCGGCATTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQVRLNI*NSALES
Trigger: ACTCTCCAATGCCGAGTTTCAGATGTTGAGACGTAC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGTAGCCAGTGGCTTTTaGGGCCAGAGCAGAGCTTCG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLVASGF*GQSRAS
Trigger: CGAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTAC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTACTTGTCAATGTATGTaGGCTTCTCAATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVTCQCM*ASQSHQ
Trigger: TTGATGAGATTGAGAAGCTCACATACATTGACAAGT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTCATGGACTCACTGTTaGGGCCTTTCAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSSWTHC*GLSVSF
Trigger: AAAAGACACTGAAAGGCCTCAACAGTGAGTCCATGA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAATTGTCTGGGCCTCAGTaGGCCCAAGGCATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLSGPQ*AQGILK
Trigger: TTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAA...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATTGTCTGGGCCTCAGTaGGCCCAAGGCATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKLSGPQ*AQGILK
Trigger: TTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGACACTGCTGCCAATGTaGTATGGACCACAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLTLLPM*YGPQPS
Trigger: GCTAGGCTGTGGTCCATATCACATTGGCAGCAGTGT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAATCTGGCCTCCAACTaGTATGATGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQNLASN*YDAATT
Trigger: TGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCTCATCCAAGACAGCTaGGAAGATGGAGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLLIQDS*EDGAIL
Trigger: GAGGATCGCTCCATCTTCTCAGCTGTCTTGGATGAG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGCTTTCCAAGGTGCCTaGGCCACCTTCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLAFQGA*ATFSSS
Trigger: GGATGAGCTGAAGGTGGCTCAGGCACCTTGGAAAGC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGCTTTCCAAGGTGCCTaGGCCACCTTCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIAFQGA*ATFSSS
Trigger: GGATGAGCTGAAGGTGGCTCAGGCACCTTGGAAAGC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACAATGGCCCCTTGGCTaGTGGTTTGTGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLQWPLG*WFVWAA
Trigger: TGCTGCCCACACAAACCATCAGCCAAGGGGCCATTG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACAATGGCCCCTTGGCTaGTGGTTTGTGTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIQWPLG*WFVWAA
Trigger: TGCTGCCCACACAAACCATCAGCCAAGGGGCCATTG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCAAGAAATTGGACGTTaGATGGACCAGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSQEIGR*MDQRWQ
Trigger: TTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATGGTGGCCACATCAATaGAGTCAACCCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKWWPHQ*SQPQES
Trigger: AGACTCTTGGGGTTGACTTCATTGATGTGGCCACCA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTTTAGGAAGGCTGTATaGATACCTTCACCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: RRNGVLALTVGGINSAVWFRKAV*IPSPKQ
Trigger: TTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGAATCTTGGCCGGAATaGTTGCTGGATGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKESWPE*LLDAYQ
Trigger: CTGATAGGCATCCAGCAATCATTCCGGCCAAGATTC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGACATTGTTGGCGTTaGGCCAGTCTGATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDGHCWR*ASLMWL
Trigger: AAGCCACATCAGACTGGCTCAACGCCAACAATGTCC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGATTCTGTCCTTCTTaGGACGGCCATGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGFCPS*DGHATG
Trigger: CCCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAGACGGAAATTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLRRKLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAATTTCCGTCT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGAAATCTGGGAGGGGTaGAGTCAGTGTTTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKEIWEG*SQCLRL
Trigger: CAGCCTTAAACACTGACTGCACCCCTCCCAGATTTC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000233072.10
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTCTTCCTGTAGCCATTaGCCTAAACTCTTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGSSCSH*PKLLVA
Trigger: GGCTACCAAGAGTTTAGGGCAATGGCTACAGGAAGA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATTCCAGGGAACTAAGTaGACTTCAGCTCCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQFQGTK*TSAPRF
Trigger: AAAGCGAGGAGCTGAAGTGCACTTAGTTCCCTGGAA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATACCTCTGGGTGGAACTaGACAGCGAAGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDTSGWN*TAKKGL
Trigger: CAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCTGTCTGGCCACCCATaGCCAGAATTAACCCATCTG +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLLSGHP*PELTHL
Trigger: CAGATGGGTTAATTCTGGGCATGGGTGGCCAGACAG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGTCTGCTGCCTTCAGTaGATCCTCAATCGATTCCAC +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKVCCLQ*ILNRFH
Trigger: GTGGAATCGATTGAGGATGCACTGAAGGCAGCAGAC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGCCAATGGTGTCTGCTaGCTTCAGTGCATCCTCAAT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKANGVC*LQCILN
Trigger: ATTGAGGATGCACTGAAGGCAGCAGACACCATTGGC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGTAGCCAATGGTGTCTaGTGCCTTCAGTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDVANGV*CLQCIL
Trigger: GAGGATGCACTGAAGGCAGCAGACACCATTGGCTAC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCTCTGTTGGGACAGATaGCTGAGCCTAACCCACCCA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVLCWDR*LSLTHP
Trigger: TGGGTGGGTTAGGCTCAGGCATCTGTCCCAACAGAG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGGGCAAACTGAATGTTaGATTCACCCACAATGCCCA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGGQTEC*IHPQCP
Trigger: TGGGCATTGTGGGTGAATGCAACATTCAGTTTGCCC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATCACAGTCTCAGGATTaGAATTCACCACCACCGTCT +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQSQSQD*NSPPPS
Trigger: AGACGGTGGTGGTGAATTGCAATCCTGAGACTGTGA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTCACAGTCTCAGGATTaGAATTCACCACCACCGTCT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGSQSQD*NSPPPS
Trigger: AGACGGTGGTGGTGAATTGCAATCCTGAGACTGTGA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTACTCATCAAAGTCTGTaGTCACAGTCTCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSTHQSL*SQSQDC
Trigger: GCAATCCTGAGACTGTGAGCACAGACTTTGATGAGT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATAACAGCTTTCCAAGGTaGCTGAGCCACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDNSFPR*LSHLQL
Trigger: GAGCTGAAGGTGGCTCAGGCACCTTGGAAAGCTGTT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTCCCGAGTGGACACCTaGATCTTCAACATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGSRVDT*IFNMFR
Trigger: TCTGAACATGTTGAAGATGCAGGTGTCCACTCGGGA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQDGKSL*NLPGSI
Trigger: GATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGDGKSL*NLPGSI
Trigger: GATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCTCTATGCTGCTTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGCATGGGAGCCTTAATTaGAACATAGTCAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: ISMLLFQHCTACSGKDSWHGSLN*NIVSRN
Trigger: ATTCCTGCTGACTATGTTGCAATTAAGGCTCCCATG...CCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAAGCAGCATAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTCTGCATCTCTATGCTaGTTTTCCAGCACTGTACTG +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSSASLC*FSSTVL
Trigger: CAGTACAGTGCTGGAAAAGCAGCATAGAGATGCAGA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGGGTGCTCCTAATCTGTaGTGTAAGAACAAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SVANSLKPSLCNCSATPRGAPNL*CKNKVV
Trigger: AACAACCTTGTTCTTACAGCACAGATTAGGAGCACC...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACCAGCAACAGAGGATaGATGGCCAAAGGAGTAACC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQTSNRG*MAKGVT
Trigger: GGTTACTCCTTTGGCCATCCATCCTCTGTTGCTGGT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGTCAGTAATAGCTTCTaGGTACCCTCCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLVSNSF*VPSQAS
Trigger: ACTGGCCTGGGAGGGTACCCAGAAGCTATTACTGAC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGATTCTGCCCTCTGTTaGCCATGGACATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQDSALC*PWTSCR
Trigger: CCTACAAGATGTCCATGGCCAACAGAGGGCAGAATC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGGGTGACCTCTGGGTaGAACTGCACAGCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGVTSG*NCTAKK
Trigger: CTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGTACTCAGTGTCTATTaGCCCCGGGGTGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLVLSVY*PRGDLW
Trigger: CCAGAGGTCACCCCGGGGCCAATAGACACTGAGTAC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCTCCAGCCTGACCAATaGACAGACCTCCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLLQPDQ*TDLLIL
Trigger: TAGGATCAGGAGGTCTGTCCATTGGTCAGGCTGGAG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTCATTTTCTTCCTTCATaGCTTTTACAGCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVHFLPS*LLQLEI
Trigger: GATCTCAAGCTGTAAAAGCCATGAAGGAAGAAAATG...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673711.1
CDS-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATCACTGGGTAGCCAATaGTGTCTGCTGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEASLGSQ*CLLPSV
Trigger: CACTGAAGGCAGCAGACACCATTGGCTACCCAGTGA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAACGGATCATCACTaGGTAGCCAATGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDGTDHH*VANGVC
Trigger: GCAGACACCATTGGCTACCCAGTGATGATCCGTTCC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATCAAAGTCTCTCTGTTaGGACAGATGCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQSKSLC*DRCLSL
Trigger: TAGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGCATTGGAGAGTGTCTaGGCAGGAGCCACAACAACT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDALESV*AGATTT
Trigger: AGTTGTTGTGGCTCCTGCCCAGACACTCTCCAATGC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACCATTCTTTGTTCATTaGGAGACGGGGAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQPFFVH*ETGSET
Trigger: GGTTTCACTCCCCGTCTCCCAATGAACAAAGAATGG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTGATACGCGTGCTGCTTaGTTCAGACAACTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSDTRAA*FRQLFS
Trigger: AGAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATC...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCAATGGCCTTGGCAATaGCATAGATACGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLQWPWQ*HRYACC
Trigger: GCAGCACGCGTATCTATGCCATTGCCAAGGCCATTG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCACAATGGCCTTGGCAATaGCATAGATACGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAQWPWQ*HRYACC
Trigger: GCAGCACGCGTATCTATGCCATTGCCAAGGCCATTG...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTGTCATCAATGGCCTTaGCAATGGCATAGATACGCG +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGCHQWP*QWHRYA
Trigger: CGCGTATCTATGCCATTGCCAAGGCCATTGATGACA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTTGTTTAACCCAAGGGTaGATGTTTTTCTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: VLALTVGGINSAVWDPIVCLTQG*MFFFNL
Trigger: GAGGTTAAAGAAAAACATCCACCCTTGGGTTAAACA...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTTTTGTCAGCACCACTaGGTGCTCCTGAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGFCQHH*VLLRNS
Trigger: AGAGTTTCTCAGGAGCACCCAGTGGTGCTGACAAAA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCTCTATGCTGCTTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAAATTGGACGTTGAATaGACCAGAGATGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: ISMLLFQHCTACSGKDSWKLDVE*TRDGKS
Trigger: GCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTT...CCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAAGCAGCATAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGCCGGAATGATTGCTaGATGCCTATCAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLGRNDC*MPIRMP
Trigger: AGGCATCCTGATAGGCATCCAGCAATCATTCCGGCC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAATTATGGGATGGTCCAATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAAGGCCGGAATGATTGCTaGATGCCTATCAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: ELWDGPMLEDVSHQHSLQGRNDC*MPIRMP
Trigger: AGGCATCCTGATAGGCATCCAGCAATCATTCCGGCC...TTGGAGAGAATGTTGATGAGAAACATCTTCCAACATTGGACCATCCCATAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSPGLAK*VRMRIQ
Trigger: TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAAACAAAGGGGAAGGATCGAGAAGCTCTCAAGTTACACTCAATCACCAAGACACCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: ETKGKDREALKLHSITKTPGLAK*VRMRIQ
Trigger: TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG...TGTCTTGGTGATTGAGTGTAACTTGAGAGCTTCTCGATCCTTCCCCTTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTCCTTGCCCTTACAGTaGGTGGAATTAATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSSLPLQ*VELIVQ
Trigger: CTGCACTATTAATTCCACCCACTGTAAGGGCAAGGA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAATGAAGATTTGCTACTaGAGGCCCCTGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTMKICY*RPLGVG
Trigger: CCCCACACCCAGGGGCCTCCAGTAGCAAATCTTCAT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGTTTGTCTGACTGGTaGGGCTTGGGTCACGTGCCT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGLSDW*GLGHVP
Trigger: AGGCACGTGACCCAAGCCCCACCAGTCAGACAAACC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673630.1
3UTR CAA 72 bp CTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAATTGCAGTGAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: LKEIHSLKQENR*NLGDGNCSEPR
Trigger: TCTCGGCTCACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR CAA 72 bp AGATGTTTCTCATCAACATTCTCTCCAATCATCACCTaGGTGGCCACATCAATGAAGTCAACCCCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: RCFSSTFSPIIT*VATSMKSTPRV
Trigger: GACTCTTGGGGTTGACTTCATTGATGTGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGTGTCCTCACCACTTTaGAAGCTGTCAAAATCCTCG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKVSSPL*KLSKSS
Trigger: CGAGGATTTTGACAGCTTTCAAAGTGGTGAGGACAC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCATACTCCATCTTGGTaGAATCATGGTTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGHTPSW*NHGSRE
Trigger: TTCCCTGGAACCATGATTTCACCAAGATGGAGTATG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACATACTCCATCTTGGTaGAATCATGGTTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQHTPSW*NHGSRE
Trigger: TTCCCTGGAACCATGATTTCACCAAGATGGAGTATG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACATAATGGACTCAACTaGAGTTCCCAGGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQHNGLN*SSQDFH
Trigger: GTGAAAGTCCTGGGAACTTCAGTTGAGTCCATTATG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCACAAAGGCCTTTGTGCTaGGGTCCATCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAQRPLC*GPSKSL
Trigger: GAGAGACTTTGATGGACCTCAGCACAAAGGCCTTTG...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAGGAGCCACAACAACTaGGTCACCTGTGTGAACACC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTRSHNN*VTCVNT
Trigger: GGTGTTCACACAGGTGACTCAGTTGTTGTGGCTCCT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGATGCAGTATTCCATTaGGGTAGGATGAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQDAVFH*GRMKGK
Trigger: TTTGCCCTTCATCCTACCTCAATGGAATACTGCATC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGATGCAGTATTCCATTaGGGTAGGATGAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGDAVFH*GRMKGK
Trigger: TTTGCCCTTCATCCTACCTCAATGGAATACTGCATC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAGGTTCAAAACAGGCTaGTGTCTTCCCGGATACGAC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLRFKTG*CLPGYD
Trigger: GTCGTATCCGGGAAGACATCAGCCTGTTTTGAACCT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTTGTCTGGGCCTCAGTaGGCCCAAGGCATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLLSGPQ*AQGILK
Trigger: TTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGAGATAGTTTGTTACTaGTGGGTATTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQEIVCY*WVFCSQ
Trigger: CTGGCTGCAGAATACCCATCAGTAACAAACTATCTC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAACACTGCTGCCAATGTaGTATGGACCACAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTTLLPM*YGPQPS
Trigger: GCTAGGCTGTGGTCCATATCACATTGGCAGCAGTGT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGTCTTCTTGCCAAGTTaGCGCAGTGTGCGGATACTA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDVFLPS*RSVRIL
Trigger: TAGTATCCGCACACTGCGTCAACTTGGCAAGAAGAC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGTCTTCTTGCCAAGTTaGCGCAGTGTGCGGATACTA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLVFLPS*RSVRIL
Trigger: TAGTATCCGCACACTGCGTCAACTTGGCAAGAAGAC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAATCTGGCCTCCAACTaGTATGATGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLNLASN*YDAATT
Trigger: TGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGTGGCCATGTTCAGAGATGGCATaGGAGATAACCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: MLEDVSHQHSLQSSPWWPCSEMA*EITLPS
Trigger: AGATGGAAGGGTTATCTCTCATGCCATCTCTGAACA...TGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTGTTCAGAGATGGCATaGGAGATAACCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGCSEMA*EITLPS
Trigger: AGATGGAAGGGTTATCTCTCATGCCATCTCTGAACA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACAAGAAATTGGACGTTaGATGGACCAGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQQEIGR*MDQRWQ
Trigger: TTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGAATCTTGGCCGGAATaGTTGCTGGATGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDESWPE*LLDAYQ
Trigger: CTGATAGGCATCCAGCAATCATTCCGGCCAAGATTC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGGACATTGTTGGCGTTaGGCCAGTCTGATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVGHCWR*ASLMWL
Trigger: AAGCCACATCAGACTGGCTCAACGCCAACAATGTCC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGGACATTGTTGGCGTTaGGCCAGTCTGATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQGHCWR*ASLMWL
Trigger: AAGCCACATCAGACTGGCTCAACGCCAACAATGTCC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQTCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGACCTCTGGGTGGAACTaGACAGCGAAGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMTSGWN*TAKKGL
Trigger: CAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAACCTCTGGGTGGAACTaGACAGCGAAGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQTSGWN*TAKKGL
Trigger: CAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTGTCTGGCCACCCATaGCCAGAATTAACCCATCTG +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLSGHP*PELTHL
Trigger: CAGATGGGTTAATTCTGGGCATGGGTGGCCAGACAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTTATCTGAAAACAGCTaGCTGTCTTCCGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSLSENS*LSSVAI
Trigger: TATGGCTACGGAAGACAGGCAGCTGTTTTCAGATAA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGTCTGCTGCCTTCAGTaGATCCTCAATCGATTCCAC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDVCCLQ*ILNRFH
Trigger: GTGGAATCGATTGAGGATGCACTGAAGGCAGCAGAC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAGCCAATGGTGTCTGCTaGCTTCAGTGCATCCTCAAT +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAANGVC*LQCILN
Trigger: ATTGAGGATGCACTGAAGGCAGCAGACACCATTGGC...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGCCAATGGTGTCTGCTaGCTTCAGTGCATCCTCAAT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLANGVC*LQCILN
Trigger: ATTGAGGATGCACTGAAGGCAGCAGACACCATTGGC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGTAGCCAATGGTGTCTaGTGCCTTCAGTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQVANGV*CLQCIL
Trigger: GAGGATGCACTGAAGGCAGCAGACACCATTGGCTAC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGTAGCCAATGGTGTCTaGTGCCTTCAGTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMVANGV*CLQCIL
Trigger: GAGGATGCACTGAAGGCAGCAGACACCATTGGCTAC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACTCTGTTGGGACAGATaGCTGAGCCTAACCCACCCA +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILCWDR*LSLTHP
Trigger: TGGGTGGGTTAGGCTCAGGCATCTGTCCCAACAGAG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAATGCATTCACCCACAATaGCCAAGTGGCGAACAACAT +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQCIHPQ*PSGEQH
Trigger: ATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCA...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGGGCAAACTGAATGTTaGATTCACCCACAATGCCCA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQGQTEC*IHPQCP
Trigger: TGGGCATTGTGGGTGAATGCAACATTCAGTTTGCCC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGACTCATCAAAGTCTGTaGTCACAGTCTCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGTHQSL*SQSQDC
Trigger: GCAATCCTGAGACTGTGAGCACAGACTTTGATGAGT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGATGCAGCCACCACATaGCTCCTGATGGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVDAATT*LLMVDV
Trigger: GACATCTACCATCAGGAGGCATGTGGTGGCTGCATC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAACAGCTTTCCAAGGTaGCTGAGCCACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNNSFPR*LSHLQL
Trigger: GAGCTGAAGGTGGCTCAGGCACCTTGGAAAGCTGTT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQDGKSL*NLPGSI
Trigger: GATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGTGGCCAGGAATGATTGCTGGATaGCTATCAGGATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: MLEDVSHQHSLQSSPWWPGMIAG*LSGCLS
Trigger: AGAAAGGCATCCTGATAGGCATCCAGCAATCATTCC...TGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR GCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATCTTGGAGTCCACCTTaGGAGATTTCTGCACAGCTT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKSWSPP*EISAQL
Trigger: AAGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTCTGCATCTCTATGCTaGTTTTCCAGCACTGTACTG +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGSASLC*FSSTVL
Trigger: CAGTACAGTGCTGGAAAAGCAGCATAGAGATGCAGA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAGGAATGGTGTCCTTaGCCTTACAGTGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQKEWCP*PYSGWN
Trigger: ATTCCACCCACTGTAAGGGCAAGGACACCATTCCTT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGTCAGTAATAGCTTCTaGGTACCCTCCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTVSNSF*VPSQAS
Trigger: ACTGGCCTGGGAGGGTACCCAGAAGCTATTACTGAC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGTCAGTAATAGCTTCTaGGTACCCTCCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVVSNSF*VPSQAS
Trigger: ACTGGCCTGGGAGGGTACCCAGAAGCTATTACTGAC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGACTGATTCCAAACAATaGCTCCTTGCGATCACTCTC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGTDSKQ*LLAITL
Trigger: GAGAGTGATCGCAAGGAGCCATTGTTTGGAATCAGT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAACATCTTGTAGGTTTTaGCACCAGCAGCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKTSCRF*HQQPIL
Trigger: CAGGATTGGCTGCTGGTGCCAAAACCTACAAGATGT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGCCCTCTGTTGGCCATaGACATCTTGTAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDALCWP*TSCRFW
Trigger: CCAAAACCTACAAGATGTCCATGGCCAACAGAGGGC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGATTCTGCCCTCTGTTaGCCATGGACATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDDSALC*PWTSCR
Trigger: CCTACAAGATGTCCATGGCCAACAGAGGGCAGAATC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCTCCAGCCTGACCAATaGACAGACCTCCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVLQPDQ*TDLLIL
Trigger: TAGGATCAGGAGGTCTGTCCATTGGTCAGGCTGGAG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTCCAGCCTGACCAATaGACAGACCTCCTGATCCTA +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLQPDQ*TDLLIL
Trigger: TAGGATCAGGAGGTCTGTCCATTGGTCAGGCTGGAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTCACTGGGTAGCCAATaGTGTCTGCTGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSLGSQ*CLLPSV
Trigger: CACTGAAGGCAGCAGACACCATTGGCTACCCAGTGA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCACTGGGTAGCCAATaGTGTCTGCTGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSLGSQ*CLLPSV
Trigger: CACTGAAGGCAGCAGACACCATTGGCTACCCAGTGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGGAACGGATCATCACTaGGTAGCCAATGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVGTDHH*VANGVC
Trigger: GCAGACACCATTGGCTACCCAGTGATGATCCGTTCC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAGGATCGAGAAGCTCTCAAGTTACACTCAATCACCAAGACATCATTTCCTTTGTCAAAGTCTCTCTGTTaGGACAGATGCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: KDREALKLHSITKTSFPLSKSLC*DRCLSL
Trigger: TAGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGA...CAAAGGAAATGATGTCTTGGTGATTGAGTGTAACTTGAGAGCTTCTCGATCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATTCTCCACCAGAATTTaGTTGGTCATAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQFSTRI*LVIAKA
Trigger: GGCCTTTGCTATGACCAACCAAATTCTGGTGGAGAA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGCATTGGAGAGTGTCTaGGCAGGAGCCACAACAACT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVALESV*AGATTT
Trigger: AGTTGTTGTGGCTCCTGCCCAGACACTCTCCAATGC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGCATTGGAGAGTGTCTaGGCAGGAGCCACAACAACT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMALESV*AGATTT
Trigger: AGTTGTTGTGGCTCCTGCCCAGACACTCTCCAATGC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCTGAAACTCGGCATTaGAGAGTGTCTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSETRH*RVSGQE
Trigger: CTCCTGCCCAGACACTCTCCAATGCCGAGTTTCAGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCCCACAATGCCCAAGTaGCGAACAACATTGATTGAA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGPTMPK*RTTLIE
Trigger: TTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACCTTCTATAGATGGGTaGCACATCCGTAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQPSIDG*HIRKAF
Trigger: GAAAGCTTTACGGATGTGCCACCCATCTATAGAAGG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGATACGCGTGCTGCTTaGTTCAGACAACTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQDTRAA*FRQLFS
Trigger: AGAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCAATGGCCTTGGCAATaGCATAGATACGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVQWPWQ*HRYACC
Trigger: GCAGCACGCGTATCTATGCCATTGCCAAGGCCATTG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCAATGGCCTTGGCAATaGCATAGATACGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMQWPWQ*HRYACC
Trigger: GCAGCACGCGTATCTATGCCATTGCCAAGGCCATTG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGACAGCTGAGAAGATaGAGCGATCCTCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMRQLRR*SDPQPC
Trigger: ACAGGGCTGAGGATCGCTCCATCTTCTCAGCTGTCT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGTGGCATCTCCCGAGTaGACACCTGCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMVASPE*TPASST
Trigger: TGTTGAAGATGCAGGTGTCCACTCGGGAGATGCCAC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGTGGCATCTCCCGAGTaGACACCTGCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQVASPE*TPASST
Trigger: TGTTGAAGATGCAGGTGTCCACTCGGGAGATGCCAC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGTGGCATCTCCCGAGTaGACACCTGCATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNVASPE*TPASST
Trigger: TGTTGAAGATGCAGGTGTCCACTCGGGAGATGCCAC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTTTTCAATGGCCCCTTaGCTGATGGTTTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLFSMAP*LMVCVG
Trigger: GCCCACACAAACCATCAGCCAAGGGGCCATTGAAAA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAGTCAGCAGGAATTATaGGATGGTCCAATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSSQQEL*DGPMLE
Trigger: TTCCAACATTGGACCATCCCATAATTCCTGCTGACT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQPGLAK*VRMRIQ
Trigger: TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGTGTCCTCACCACTTTaGAAGCTGTCAAAATCCTCG +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLVSSPL*KLSKSS
Trigger: CGAGGATTTTGACAGCTTTCAAAGTGGTGAGGACAC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTTAAGTTTCCTGTACTaGTTCCAAACAATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSLSFLY*FQTMAP
Trigger: AGGAGCCATTGTTTGGAATCAGTACAGGAAACTTAA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTACAGCTTGAGATCCTaGGTAATCAAATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGYSLRS*VIKFSS
Trigger: GCTGGAGAATTTGATTACTCAGGATCTCAAGCTGTA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATACAGCTTGAGATCCTaGGTAATCAAATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQYSLRS*VIKFSS
Trigger: GCTGGAGAATTTGATTACTCAGGATCTCAAGCTGTA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACTCATTGGTCTGGACTaGTGCAATGTTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLIGLD*CNVWVH
Trigger: ATGAACCCAAACATTGCATCAGTCCAGACCAATGAG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGACCTCTGTGACAAACTaGGGGGTGATGGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMTSVTN*GVMGRK
Trigger: CTTTCTTCCCATCACCCCTCAGTTTGTCACAGAGGT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACACCTCTGTGACAAACTaGGGGGTGATGGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNTSVTN*GVMGRK
Trigger: CTTTCTTCCCATCACCCCTCAGTTTGTCACAGAGGT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACAAAGGCCTTTGTGCTaGGGTCCATCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQQRPLC*GPSKSL
Trigger: GAGAGACTTTGATGGACCTCAGCACAAAGGCCTTTG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACAAAGGCCTTTGTGCTaGGGTCCATCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTQRPLC*GPSKSL
Trigger: GAGAGACTTTGATGGACCTCAGCACAAAGGCCTTTG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAAGGAGCCACAACAACTaGGTCACCTGTGTGAACACC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIRSHNN*VTCVNT
Trigger: GGTGTTCACACAGGTGACTCAGTTGTTGTGGCTCCT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAGTACGTCTCAACATCTaGAACTCGGCATTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAVRLNI*NSALES
Trigger: ACTCTCCAATGCCGAGTTTCAGATGTTGAGACGTAC...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGCGAACAACATTGATTaGAGTACGTCTCAACATCTG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQANNID*STSQHL
Trigger: CAGATGTTGAGACGTACTTCAATCAATGTTGTTCGC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGTGGCCACATCAATGAGTGGCGAACAACATTaGTTGAAGTACGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: RCFSSTFSPIITLVATSMSGEQH*LKYVST
Trigger: TGTTGAGACGTACTTCAATCAATGTTGTTCGCCACT...CATTGATGTGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCAATCTTTGCAGCAATaGATGCCAATGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDQSLQQ*MPMGSQ
Trigger: CTGGCTACCCATTGGCATTCATTGCTGCAAAGATTG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAGGTTCAAAACAGGCTaGTGTCTTCCCGGATACGAC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTRFKTG*CLPGYD
Trigger: GTCGTATCCGGGAAGACATCAGCCTGTTTTGAACCT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCGGCTAGATGTTCCATaGAAACGGTCAAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVRLDVP*KRSRSQ
Trigger: CTGGGATCTTGACCGTTTTCATGGAACATCTAGCCG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACGGCTAGATGTTCCATaGAAACGGTCAAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQRLDVP*KRSRSQ
Trigger: CTGGGATCTTGACCGTTTTCATGGAACATCTAGCCG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAATCATGGACTCACTGTTaGGGCCTTTCAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQSWTHC*GLSVSF
Trigger: AAAAGACACTGAAAGGCCTCAACAGTGAGTCCATGA...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGAGATAGTTTGTTACTaGTGGGTATTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQEIVCY*WVFCSQ
Trigger: CTGGCTGCAGAATACCCATCAGTAACAAACTATCTC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGAGATAGTTTGTTACTaGTGGGTATTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKEIVCY*WVFCSQ
Trigger: CTGGCTGCAGAATACCCATCAGTAACAAACTATCTC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCATGGTCATCAAAATTaGCATCATGCTCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGHGHQN*HHAPDH
Trigger: ATGGTCAGGAGCATGATGTCAATTTTGATGACCATG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAACACTGCTGCCAATGTaGTATGGACCACAGCCTAGC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLTLLPM*YGPQPS
Trigger: GCTAGGCTGTGGTCCATATCACATTGGCAGCAGTGT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGTCTTCTTGCCAAGTTaGCGCAGTGTGCGGATACTA +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTVFLPS*RSVRIL
Trigger: TAGTATCCGCACACTGCGTCAACTTGGCAAGAAGAC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAATCTGGCCTCCAACTaGTATGATGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMNLASN*YDAATT
Trigger: TGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAATCTGGCCTCCAACTaGTATGATGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTNLASN*YDAATT
Trigger: TGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACTCATCCAAGACAGCTaGGAAGATGGAGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILIQDS*EDGAIL
Trigger: GAGGATCGCTCCATCTTCTCAGCTGTCTTGGATGAG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACTCATCCAAGACAGCTaGGAAGATGGAGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLLIQDS*EDGAIL
Trigger: GAGGATCGCTCCATCTTCTCAGCTGTCTTGGATGAG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACAAGAAATTGGACGTTaGATGGACCAGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKQEIGR*MDQRWQ
Trigger: TTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTGGTGGCCACATCAATaGAGTCAACCCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNWWPHQ*SQPQES
Trigger: AGACTCTTGGGGTTGACTTCATTGATGTGGCCACCA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATGGTGGCCACATCAATaGAGTCAACCCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQWWPHQ*SQPQES
Trigger: AGACTCTTGGGGTTGACTTCATTGATGTGGCCACCA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTGGTGGCCACATCAATaGAGTCAACCCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMWWPHQ*SQPQES
Trigger: AGACTCTTGGGGTTGACTTCATTGATGTGGCCACCA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGAATCTTGGCCGGAATaGTTGCTGGATGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVESWPE*LLDAYQ
Trigger: CTGATAGGCATCCAGCAATCATTCCGGCCAAGATTC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGAATCTTGGCCGGAATaGTTGCTGGATGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNESWPE*LLDAYQ
Trigger: CTGATAGGCATCCAGCAATCATTCCGGCCAAGATTC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGGACATTGTTGGCGTTaGGCCAGTCTGATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIGHCWR*ASLMWL
Trigger: AAGCCACATCAGACTGGCTCAACGCCAACAATGTCC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGACATTGTTGGCGTTaGGCCAGTCTGATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGHCWR*ASLMWL
Trigger: AAGCCACATCAGACTGGCTCAACGCCAACAATGTCC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGAAAAGTTTGGTCACCTaGAAATTAGTGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGKSLVT*KLVRRG
Trigger: CCCTCTCCTCACTAATTTTCAGGTGACCAAACTTTT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEATCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCCAGCCTGGAGAGTGTaGCTCCATCTCAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLPAWRV*LHLKKK
Trigger: TTTCTTTTTGAGATGGAGTCACACTCTCCAGGCTGG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATTCCAGGACAATGTGTaGTGTCTGTGCCTTGACAGA +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAFQDNV*CLCLDR
Trigger: TCTGTCAAGGCACAGACAGCACACATTGTCCTGGAA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATCTTCCTGTAGCCATTaGCCTAAACTCTTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEASSCSH*PKLLVA
Trigger: GGCTACCAAGAGTTTAGGGCAATGGCTACAGGAAGA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTCTTCCTGTAGCCATTaGCCTAAACTCTTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLSSCSH*PKLLVA
Trigger: GGCTACCAAGAGTTTAGGGCAATGGCTACAGGAAGA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCAAACAATGGCTCCTTaGGATCACTCTCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGQTMAP*DHSPKS
Trigger: AGATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACCCATCTGGCTGTTCTaGCTTGATGACCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIPIWLF*LDDLCD
Trigger: GTCACAGAGGTCATCAAGGCAGAACAGCCAGATGGG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATACTGTCTGGCCACCCATaGCCAGAATTAACCCATCTG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKILSGHP*PELTHL
Trigger: CAGATGGGTTAATTCTGGGCATGGGTGGCCAGACAG...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATTATCTGAAAACAGCTaGCTGTCTTCCGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQLSENS*LSSVAI
Trigger: TATGGCTACGGAAGACAGGCAGCTGTTTTCAGATAA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTTATCTGAAAACAGCTaGCTGTCTTCCGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGLSENS*LSSVAI
Trigger: TATGGCTACGGAAGACAGGCAGCTGTTTTCAGATAA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGTCTGCTGCCTTCAGTaGATCCTCAATCGATTCCAC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQVCCLQ*ILNRFH
Trigger: GTGGAATCGATTGAGGATGCACTGAAGGCAGCAGAC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGTCTGCTGCCTTCAGTaGATCCTCAATCGATTCCAC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNVCCLQ*ILNRFH
Trigger: GTGGAATCGATTGAGGATGCACTGAAGGCAGCAGAC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGCCAATGGTGTCTGCTaGCTTCAGTGCATCCTCAAT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMANGVC*LQCILN
Trigger: ATTGAGGATGCACTGAAGGCAGCAGACACCATTGGC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGTAGCCAATGGTGTCTaGTGCCTTCAGTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIVANGV*CLQCIL
Trigger: GAGGATGCACTGAAGGCAGCAGACACCATTGGCTAC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATGCATTCACCCACAATaGCCAAGTGGCGAACAACAT +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEACIHPQ*PSGEQH
Trigger: ATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGGCAAACTGAATGTTaGATTCACCCACAATGCCCA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLGQTEC*IHPQCP
Trigger: TGGGCATTGTGGGTGAATGCAACATTCAGTTTGCCC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGGCAAACTGAATGTTaGATTCACCCACAATGCCCA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDGQTEC*IHPQCP
Trigger: TGGGCATTGTGGGTGAATGCAACATTCAGTTTGCCC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACATAGATACGCGTGCTaGTTGGTTCAGACAACTCTT +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQHRYAC*LVQTTL
Trigger: AAGAGTTGTCTGAACCAAGCAGCACGCGTATCTATG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTGGCATAGATACGCGTaGTGCTTGGTTCAGACAACT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDWHRYA*CLVQTT
Trigger: AGTTGTCTGAACCAAGCAGCACGCGTATCTATGCCA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTCACAGTCTCAGGATTaGAATTCACCACCACCGTCT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLSQSQD*NSPPPS
Trigger: AGACGGTGGTGGTGAATTGCAATCCTGAGACTGTGA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGATGCAGCCACCACATaGCTCCTGATGGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLDAATT*LLMVDV
Trigger: GACATCTACCATCAGGAGGCATGTGGTGGCTGCATC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAACAGCTTTCCAAGGTaGCTGAGCCACCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFINSFPR*LSHLQL
Trigger: GAGCTGAAGGTGGCTCAGGCACCTTGGAAAGCTGTT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTCCCGAGTGGACACCTaGATCTTCAACATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDSRVDT*IFNMFR
Trigger: TCTGAACATGTTGAAGATGCAGGTGTCCACTCGGGA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEADGKSL*NLPGSI
Trigger: GATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATC...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDDGKSL*NLPGSI
Trigger: GATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGACCTTGCGAGATTTCTaGACAGCTTCAGCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGTLRDF*TASAKS
Trigger: ACTTTTTGCTGAAGCTGTGCAGAAATCTCGCAAGGT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTCTTGGAGTCCACCTTaGGAGATTTCTGCACAGCTT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDSWSPP*EISAQL
Trigger: AAGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATCTGCATCTCTATGCTaGTTTTCCAGCACTGTACTG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKSASLC*FSSTVL
Trigger: CAGTACAGTGCTGGAAAAGCAGCATAGAGATGCAGA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAAGGAATGGTGTCCTTaGCCTTACAGTGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLKEWCP*PYSGWN
Trigger: ATTCCACCCACTGTAAGGGCAAGGACACCATTCCTT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTTCCCCTCCTTCTCCTaGTGCTGTTTATTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDFPSFS*CCLFSL
Trigger: AAGGGAGAATAAACAGCAGCAGGAGAAGGAGGGGAA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAATGTATGTGCATGCATaGCCTCTCTCCCCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQMYVHA*PLSPPT
Trigger: TGTTGGAGGGGAGAGAGGGCATGCATGCACATACAT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACTGACAATGAAGATTTaGTACTGGAGGCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQLTMKI*YWRPLG
Trigger: ACCCAGGGGCCTCCAGTAGCAAATCTTCATTGTCAG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAATGCAAACTTCACTaGTCCCTCATACTGGATGCT +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQKCKLH*SLILDA
Trigger: AGCATCCAGTATGAGGGAGCAGTGAAGTTTGCATTT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAATGTAAAAGAAATCTaGGAGGGGTGCAGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQNVKEI*EGCSQC
Trigger: ACACTGACTGCACCCCTCCCAGATTTCTTTTACATT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000233072.10
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAACCAGCAACAGAGGATaGATGGCCAAAGGAGTAACC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTTSNRG*MAKGVT
Trigger: GGTTACTCCTTTGGCCATCCATCCTCTGTTGCTGGT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAACCAGCAACAGAGGATaGATGGCCAAAGGAGTAACC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQTSNRG*MAKGVT
Trigger: GGTTACTCCTTTGGCCATCCATCCTCTGTTGCTGGT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGTCAGTAATAGCTTCTaGGTACCCTCCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLVSNSF*VPSQAS
Trigger: ACTGGCCTGGGAGGGTACCCAGAAGCTATTACTGAC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACTGATTCCAAACAATaGCTCCTTGCGATCACTCTC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQTDSKQ*LLAITL
Trigger: GAGAGTGATCGCAAGGAGCCATTGTTTGGAATCAGT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGCCCTCTGTTGGCCATaGACATCTTGTAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNALCWP*TSCRFW
Trigger: CCAAAACCTACAAGATGTCCATGGCCAACAGAGGGC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGCCCTCTGTTGGCCATaGACATCTTGTAGGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTALCWP*TSCRFW
Trigger: CCAAAACCTACAAGATGTCCATGGCCAACAGAGGGC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGGAACGGATCATCACTaGGTAGCCAATGGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLGTDHH*VANGVC
Trigger: GCAGACACCATTGGCTACCCAGTGATGATCCGTTCC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACTGTGTGAACACCCATaGCATCAACATTTTCCATGT +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQLCEHP*HQHFPC
Trigger: ACATGGAAAATGTTGATGCCATGGGTGTTCACACAG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGCATTGGAGAGTGTCTaGGCAGGAGCCACAACAACT +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLALESV*AGATTT
Trigger: AGTTGTTGTGGCTCCTGCCCAGACACTCTCCAATGC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATCTGAAACTCGGCATTaGAGAGTGTCTGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKISETRH*RVSGQE
Trigger: CTCCTGCCCAGACACTCTCCAATGCCGAGTTTCAGA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACCCACAATGCCCAAGTaGCGAACAACATTGATTGAA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQPTMPK*RTTLIE
Trigger: TTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTATCCGTAAAGCTTTCTaGAAACTCTCCTCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSIRKAF*KLSSKV
Trigger: TACCTTTGAGGAGAGTTTCCAGAAAGCTTTACGGAT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACCTTCTATAGATGGGTaGCACATCCGTAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKPSIDG*HIRKAF
Trigger: GAAAGCTTTACGGATGTGCCACCCATCTATAGAAGG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCCATTCTTTGTTCATTaGGAGACGGGGAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLPFFVH*ETGSET
Trigger: GGTTTCACTCCCCGTCTCCCAATGAACAAAGAATGG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGATACGCGTGCTGCTTaGTTCAGACAACTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKDTRAA*FRQLFS
Trigger: AGAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACAATGGCCTTGGCAATaGCATAGATACGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIQWPWQ*HRYACC
Trigger: GCAGCACGCGTATCTATGCCATTGCCAAGGCCATTG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAAGACAGCTGAGAAGATaGAGCGATCCTCAGCCCTGT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIRQLRR*SDPQPC
Trigger: ACAGGGCTGAGGATCGCTCCATCTTCTCAGCTGTCT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATTTTGTCAGCACCACTaGGTGCTCCTGAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAFCQHH*VLLRNS
Trigger: AGAGTTTCTCAGGAGCACCCAGTGGTGCTGACAAAA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTTTTGTCAGCACCACTaGGTGCTCCTGAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDFCQHH*VLLRNS
Trigger: AGAGTTTCTCAGGAGCACCCAGTGGTGCTGACAAAA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATTTTCAATGGCCCCTTaGCTGATGGTTTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQFSMAP*LMVCVG
Trigger: GCCCACACAAACCATCAGCCAAGGGGCCATTGAAAA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGGGATGGTCCAATGTTaGAAGATGTTTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQGMVQC*KMFLIN
Trigger: GTTGATGAGAAACATCTTCCAACATTGGACCATCCC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATCTCACATCTCAGAATaGGGTCAGCATCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQSHISE*GQHPST
Trigger: GGTTGAGGGATGCTGACCCCATTCTGAGATGTGAGA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTCTCACATCTCAGAATaGGGTCAGCATCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNSHISE*GQHPST
Trigger: GGTTGAGGGATGCTGACCCCATTCTGAGATGTGAGA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATCTCACATCTCAGAATaGGGTCAGCATCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTSHISE*GQHPST
Trigger: GGTTGAGGGATGCTGACCCCATTCTGAGATGTGAGA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAATCAGGATGCCTTTCTaGGGTATCTTAAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQIRMPF*GILNPV
Trigger: CACAGGATTTAAGATACCCCAGAAAGGCATCCTGAT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGCCGGAATGATTGCTaGATGCCTATCAGGATGCCT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGRNDC*MPIRMP
Trigger: AGGCATCCTGATAGGCATCCAGCAATCATTCCGGCC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGTGTCCTCACCACTTTaGAAGCTGTCAAAATCCTCG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTVSSPL*KLSKSS
Trigger: CGAGGATTTTGACAGCTTTCAAAGTGGTGAGGACAC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAACAAAATCCACAGGCTaGCCTTCAAATTCAATCTTC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQTKSTG*PSNSIF
Trigger: GAAGATTGAATTTGAAGGTCAGCCTGTGGATTTTGT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAAGCCTGTTTGTTTGTaGTATTCAAAACAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSKPVCL*YSKQAD
Trigger: ATCAGCCTGTTTTGAATATCACAAACAAACAGGCTT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCTCATTGGTCTGGACTaGTGCAATGTTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDLIGLD*CNVWVH
Trigger: ATGAACCCAAACATTGCATCAGTCCAGACCAATGAG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAACCTCTGTGACAAACTaGGGGGTGATGGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKITSVTN*GVMGRK
Trigger: CTTTCTTCCCATCACCCCTCAGTTTGTCACAGAGGT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCATAATGGACTCAACTaGAGTTCCCAGGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLHNGLN*SSQDFH
Trigger: GTGAAAGTCCTGGGAACTTCAGTTGAGTCCATTATG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATACAAAGGCCTTTGTGCTaGGGTCCATCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIQRPLC*GPSKSL
Trigger: GAGAGACTTTGATGGACCTCAGCACAAAGGCCTTTG...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACAAAGGCCTTTGTGCTaGGGTCCATCAAAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIQRPLC*GPSKSL
Trigger: GAGAGACTTTGATGGACCTCAGCACAAAGGCCTTTG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGTACGTCTCAACATCTaGAACTCGGCATTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMVRLNI*NSALES
Trigger: ACTCTCCAATGCCGAGTTTCAGATGTTGAGACGTAC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAGTGGCGAACAACATTaGTTGAAGTACGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKSGEQH*LKYVST
Trigger: TGTTGAGACGTACTTCAATCAATGTTGTTCGCCACT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGTGGCGAACAACATTaGTTGAAGTACGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQSGEQH*LKYVST
Trigger: TGTTGAGACGTACTTCAATCAATGTTGTTCGCCACT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGATGCAGTATTCCATTaGGGTAGGATGAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDDAVFH*GRMKGK
Trigger: TTTGCCCTTCATCCTACCTCAATGGAATACTGCATC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCAATCTTTGCAGCAATaGATGCCAATGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVQSLQQ*MPMGSQ
Trigger: CTGGCTACCCATTGGCATTCATTGCTGCAAAGATTG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACAATCTTTGCAGCAATaGATGCCAATGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTQSLQQ*MPMGSQ
Trigger: CTGGCTACCCATTGGCATTCATTGCTGCAAAGATTG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAGGTTCAAAACAGGCTaGTGTCTTCCCGGATACGAC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLRFKTG*CLPGYD
Trigger: GTCGTATCCGGGAAGACATCAGCCTGTTTTGAACCT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACGGCTAGATGTTCCATaGAAACGGTCAAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIRLDVP*KRSRSQ
Trigger: CTGGGATCTTGACCGTTTTCATGGAACATCTAGCCG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACGGCTAGATGTTCCATaGAAACGGTCAAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLRLDVP*KRSRSQ
Trigger: CTGGGATCTTGACCGTTTTCATGGAACATCTAGCCG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCATCTCTAATCAATTTTCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGACTTGTCAATGTATGTaGGCTTCTCAATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: AISNQFSDGREAGILSFLTCQCM*ASQSHQ
Trigger: TTGATGAGATTGAGAAGCTCACATACATTGACAAGT...CAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGAAAATTGATTAGAGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTCATGGACTCACTGTTaGGGCCTTTCAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLSWTHC*GLSVSF
Trigger: AAAAGACACTGAAAGGCCTCAACAGTGAGTCCATGA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATTGTCTGGGCCTCAGTaGGCCCAAGGCATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKILSGPQ*AQGILK
Trigger: TTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATTGTCTGGGCCTCAGTaGGCCCAAGGCATTTTGAAA +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILSGPQ*AQGILK
Trigger: TTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAGAGATAGTTTGTTACTaGTGGGTATTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAEIVCY*WVFCSQ
Trigger: CTGGCTGCAGAATACCCATCAGTAACAAACTATCTC...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGTCTTCTTGCCAAGTTaGCGCAGTGTGCGGATACTA +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIVFLPS*RSVRIL
Trigger: TAGTATCCGCACACTGCGTCAACTTGGCAAGAAGAC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGTCTTCTTGCCAAGTTaGCGCAGTGTGCGGATACTA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLVFLPS*RSVRIL
Trigger: TAGTATCCGCACACTGCGTCAACTTGGCAAGAAGAC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAAATCTGGCCTCCAACTaGTATGATGCAGCCACCACA +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKINLASN*YDAATT
Trigger: TGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATGTTCAGAGATGGCATaGGAGATAACCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEACSEMA*EITLPS
Trigger: AGATGGAAGGGTTATCTCTCATGCCATCTCTGAACA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCAAGAAATTGGACGTTaGATGGACCAGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDQEIGR*MDQRWQ
Trigger: TTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATGGTGGCCACATCAATaGAGTCAACCCCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIWWPHQ*SQPQES
Trigger: AGACTCTTGGGGTTGACTTCATTGATGTGGCCACCA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATTTAGGAAGGCTGTATaGATACCTTCACCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQFRKAV*IPSPKQ
Trigger: TTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGAATCTTGGCCGGAATaGTTGCTGGATGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLESWPE*LLDAYQ
Trigger: CTGATAGGCATCCAGCAATCATTCCGGCCAAGATTC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGAATCTTGGCCGGAATaGTTGCTGGATGCCTATCAG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIESWPE*LLDAYQ
Trigger: CTGATAGGCATCCAGCAATCATTCCGGCCAAGATTC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAAAAGTTTGGTCACCTaGAAATTAGTGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKKSLVT*KLVRRG
Trigger: CCCTCTCCTCACTAATTTTCAGGTGACCAAACTTTT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCCAGCCTGGAGAGTGTaGCTCCATCTCAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNPAWRV*LHLKKK
Trigger: TTTCTTTTTGAGATGGAGTCACACTCTCCAGGCTGG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACCAGCCTGGAGAGTGTaGCTCCATCTCAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQPAWRV*LHLKKK
Trigger: TTTCTTTTTGAGATGGAGTCACACTCTCCAGGCTGG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGTGGCCAGGGGGAGAGTGTGAATaGCAAAAATCTGATTATTTC +
Preference number: 4 (lower is better)
Translates to: MLEDVSHQHSLQSSPWWPGGECE*QKSDYF
Trigger: GAAATAATCAGATTTTTGTCATTCACACTCTCCCCC...TGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGGGGGAGAGTGTGAATaGCAAAAATCTGATTATTTC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQGGECE*QKSDYF
Trigger: GAAATAATCAGATTTTTGTCATTCACACTCTCCCCC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTCCAGGGAACTAAGTaGACTTCAGCTCCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNFQGTK*TSAPRF
Trigger: AAAGCGAGGAGCTGAAGTGCACTTAGTTCCCTGGAA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACAAACAATGGCTCCTTaGGATCACTCTCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQQTMAP*DHSPKS
Trigger: AGATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACAAACAATGGCTCCTTaGGATCACTCTCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKQTMAP*DHSPKS
Trigger: AGATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACTCAATCGATTCCACTaGAAAACTTGGAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQLNRFH*KTWSNL
Trigger: AAGATTGCTCCAAGTTTTGCAGTGGAATCGATTGAG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCTCAATCGATTCCACTaGAAAACTTGGAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGLNRFH*KTWSNL
Trigger: AAGATTGCTCCAAGTTTTGCAGTGGAATCGATTGAG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGTCTGCTGCCTTCAGTaGATCCTCAATCGATTCCAC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIVCCLQ*ILNRFH
Trigger: GTGGAATCGATTGAGGATGCACTGAAGGCAGCAGAC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTGCATTCACCCACAATaGCCAAGTGGCGAACAACAT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNCIHPQ*PSGEQH
Trigger: ATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGGGCAAACTGAATGTTaGATTCACCCACAATGCCCA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVGQTEC*IHPQCP
Trigger: TGGGCATTGTGGGTGAATGCAACATTCAGTTTGCCC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATGGCATAGATACGCGTaGTGCTTGGTTCAGACAACT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTWHRYA*CLVQTT
Trigger: AGTTGTCTGAACCAAGCAGCACGCGTATCTATGCCA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTGGCATAGATACGCGTaGTGCTTGGTTCAGACAACT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNWHRYA*CLVQTT
Trigger: AGTTGTCTGAACCAAGCAGCACGCGTATCTATGCCA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAGGCATTTTGAAATCTaGTTATCTGAGAACCCAATC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSRHFEI*LSENPI
Trigger: GATTGGGTTCTCAGATAAGCAGATTTCAAAATGCCT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAATCAAATTCCACACTaGTGCCAATGTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQNQIPH*CQCDMD
Trigger: GTCCATATCACATTGGCAGCAGTGTGGAATTTGATT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGAATCAAATTCCACACTaGTGCCAATGTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGNQIPH*CQCDMD
Trigger: GTCCATATCACATTGGCAGCAGTGTGGAATTTGATT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCACAGTCTCAGGATTaGAATTCACCACCACCGTCT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSQSQD*NSPPPS
Trigger: AGACGGTGGTGGTGAATTGCAATCCTGAGACTGTGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGGTAGTCCACAGACTTTaGAAATTCCAGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGVVHRL*KFQCFI
Trigger: AATGAAGCACTGGAATTTGCAAAGTCTGTGGACTAC...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATCCCGAGTGGACACCTaGATCTTCAACATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTSRVDT*IFNMFR
Trigger: TCTGAACATGTTGAAGATGCAGGTGTCCACTCGGGA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATCCCGAGTGGACACCTaGATCTTCAACATGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQSRVDT*IFNMFR
Trigger: TCTGAACATGTTGAAGATGCAGGTGTCCACTCGGGA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAATGATTGCTGGATaGCTATCAGGATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDGMIAG*LSGCLS
Trigger: AGAAAGGCATCCTGATAGGCATCCAGCAATCATTCC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTCTTGGAGTCCACCTTaGGAGATTTCTGCACAGCTT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSWSPP*EISAQL
Trigger: AAGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATCTTGGAGTCCACCTTaGGAGATTTCTGCACAGCTT +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQSWSPP*EISAQL
Trigger: AAGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATCTGCATCTCTATGCTaGTTTTCCAGCACTGTACTG +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEASASLC*FSSTVL
Trigger: CAGTACAGTGCTGGAAAAGCAGCATAGAGATGCAGA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAAAAGTAACAAAGGCTaGCCTTGGGGAGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKKSNKG*PWGETF
Trigger: AAAAGTCTCTCCCCAAGGGCAGCCTTTGTTACTTTT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673711.1
CDS-3UTR GCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAATCTATGTATGTGCATaGATGCCCTCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLIYVCA*MPSLPS
Trigger: GGAGGGGAGAGAGGGCATGCATGCACATACATAGAT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACAATCTTCCCAAGCATaGTACCCTTATCCCGAATTA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQQSSQA*YPYPEL
Trigger: TAATTCGGGATAAGGGTACCATGCTTGGGAAGATTG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATCTTGGTGAAATCATaGTTCCAGGGAACTAAGTGC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQILVKS*FQGTKC
Trigger: GCACTTAGTTCCCTGGAACCATGATTTCACCAAGAT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATACTGATTCCAAACAATaGCTCCTTGCGATCACTCTC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDTDSKQ*LLAITL
Trigger: GAGAGTGATCGCAAGGAGCCATTGTTTGGAATCAGT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAACATCTTGTAGGTTTTaGCACCAGCAGCCAATCCTG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTTSCRF*HQQPIL
Trigger: CAGGATTGGCTGCTGGTGCCAAAACCTACAAGATGT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGATTCTGCCCTCTGTTaGCCATGGACATCTTGTAGG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLDSALC*PWTSCR
Trigger: CCTACAAGATGTCCATGGCCAACAGAGGGCAGAATC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATCAAAGTCTCTCTGTTaGGACAGATGCCTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTSKSLC*DRCLSL
Trigger: TAGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTTCTCCACCAGAATTTaGTTGGTCATAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLFSTRI*LVIAKA
Trigger: GGCCTTTGCTATGACCAACCAAATTCTGGTGGAGAA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATTCTCCACCAGAATTTaGTTGGTCATAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAFSTRI*LVIAKA
Trigger: GGCCTTTGCTATGACCAACCAAATTCTGGTGGAGAA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACTGTGTGAACACCCATaGCATCAACATTTTCCATGT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKLCEHP*HQHFPC
Trigger: ACATGGAAAATGTTGATGCCATGGGTGTTCACACAG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCCCACAATGCCCAAGTaGCGAACAACATTGATTGAA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDPTMPK*RTTLIE
Trigger: TTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGGGATTCCACTATCAACAGCTGTCCTCCGAATCACATAATTATCATGGACAAATCCGTAAAGCTTTCTaGAAACTCTCCTCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: EGFHYQQLSSESHNYHGQIRKAF*KLSSKV
Trigger: TACCTTTGAGGAGAGTTTCCAGAAAGCTTTACGGAT...TTGTCCATGATAATTATGTGATTCGGAGGACAGCTGTTGATAGTGGAATCCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCCATTCTTTGTTCATTaGGAGACGGGGAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNPFFVH*ETGSET
Trigger: GGTTTCACTCCCCGTCTCCCAATGAACAAAGAATGG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACCATTCTTTGTTCATTaGGAGACGGGGAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQPFFVH*ETGSET
Trigger: GGTTTCACTCCCCGTCTCCCAATGAACAAAGAATGG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATGTCATCAATGGCCTTaGCAATGGCATAGATACGCG +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQCHQWP*QWHRYA
Trigger: CGCGTATCTATGCCATTGCCAAGGCCATTGATGACA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTGTTTAACCCAAGGGTaGATGTTTTTCTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSCLTQG*MFFFNL
Trigger: GAGGTTAAAGAAAAACATCCACCCTTGGGTTAAACA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAGGTTGTTTGGAATCTaGCCTCCAACTGATATGATG +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKRLFGI*PPTDMM
Trigger: CATCATATCAGTTGGAGGCCAGATTCCAAACAACCT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTTTTGTCAGCACCACTaGGTGCTCCTGAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVFCQHH*VLLRNS
Trigger: AGAGTTTCTCAGGAGCACCCAGTGGTGCTGACAAAA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTTTGTCAGCACCACTaGGTGCTCCTGAGAAACTCT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNFCQHH*VLLRNS
Trigger: AGAGTTTCTCAGGAGCACCCAGTGGTGCTGACAAAA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATTTTCAATGGCCCCTTaGCTGATGGTTTGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIFSMAP*LMVCVG
Trigger: GCCCACACAAACCATCAGCCAAGGGGCCATTGAAAA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAAATTGGACGTTGAATaGACCAGAGATGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKKLDVE*TRDGKS
Trigger: GCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATCTCACATCTCAGAATaGGGTCAGCATCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLSHISE*GQHPST
Trigger: GGTTGAGGGATGCTGACCCCATTCTGAGATGTGAGA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATCTCACATCTCAGAATaGGGTCAGCATCCCTCAACC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKISHISE*GQHPST
Trigger: GGTTGAGGGATGCTGACCCCATTCTGAGATGTGAGA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDPGLAK*VRMRIQ
Trigger: TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATCCTTGCCCTTACAGTaGGTGGAATTAATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEASLPLQ*VELIVQ
Trigger: CTGCACTATTAATTCCACCCACTGTAAGGGCAAGGA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGTGTCCTCACCACTTTaGAAGCTGTCAAAATCCTCG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLVSSPL*KLSKSS
Trigger: CGAGGATTTTGACAGCTTTCAAAGTGGTGAGGACAC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCTTTGCCGTACACTTTaGCATCCTTGGTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVLCRTL*HPWLKP
Trigger: AGGTTTCAACCAAGGATGTCAAAGTGTACGGCAAAG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTTTGCCGTACACTTTaGCATCCTTGGTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLCRTL*HPWLKP
Trigger: AGGTTTCAACCAAGGATGTCAAAGTGTACGGCAAAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACATACTCCATCTTGGTaGAATCATGGTTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTHTPSW*NHGSRE
Trigger: TTCCCTGGAACCATGATTTCACCAAGATGGAGTATG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGAAGCCTGTTTGTTTGTaGTATTCAAAACAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGKPVCL*YSKQAD
Trigger: ATCAGCCTGTTTTGAATATCACAAACAAACAGGCTT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATACAGCTTGAGATCCTaGGTAATCAAATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAYSLRS*VIKFSS
Trigger: GCTGGAGAATTTGATTACTCAGGATCTCAAGCTGTA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTACAGCTTGAGATCCTaGGTAATCAAATTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLYSLRS*VIKFSS
Trigger: GCTGGAGAATTTGATTACTCAGGATCTCAAGCTGTA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCTCATTGGTCTGGACTaGTGCAATGTTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNLIGLD*CNVWVH
Trigger: ATGAACCCAAACATTGCATCAGTCCAGACCAATGAG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTCATTGGTCTGGACTaGTGCAATGTTTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLIGLD*CNVWVH
Trigger: ATGAACCCAAACATTGCATCAGTCCAGACCAATGAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCATAATGGACTCAACTaGAGTTCCCAGGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMHNGLN*SSQDFH
Trigger: GTGAAAGTCCTGGGAACTTCAGTTGAGTCCATTATG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACATAATGGACTCAACTaGAGTTCCCAGGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQHNGLN*SSQDFH
Trigger: GTGAAAGTCCTGGGAACTTCAGTTGAGTCCATTATG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCCATGTTACAGACAGTaGCACAATTGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLPCYRQ*HNCHQH
Trigger: ATGCTGATGACAATTGTGTCACTGTCTGTAACATGG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAATTATGGGATGGTCCAATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAACCATGTTACAGACAGTaGCACAATTGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: ELWDGPMLEDVSHQHSLQPCYRQ*HNCHQH
Trigger: ATGCTGATGACAATTGTGTCACTGTCTGTAACATGG...TTGGAGAGAATGTTGATGAGAAACATCTTCCAACATTGGACCATCCCATAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGCGAACAACATTGATTaGAGTACGTCTCAACATCTG +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLANNID*STSQHL
Trigger: CAGATGTTGAGACGTACTTCAATCAATGTTGTTCGC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGATGCAGTATTCCATTaGGGTAGGATGAAGGGCAAA +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMDAVFH*GRMKGK
Trigger: TTTGCCCTTCATCCTACCTCAATGGAATACTGCATC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACAATCTTTGCAGCAATaGATGCCAATGGGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIQSLQQ*MPMGSQ
Trigger: CTGGCTACCCATTGGCATTCATTGCTGCAAAGATTG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTCATGGACTCACTGTTaGGGCCTTTCAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSWTHC*GLSVSF
Trigger: AAAAGACACTGAAAGGCCTCAACAGTGAGTCCATGA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATCATGGACTCACTGTTaGGGCCTTTCAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTSWTHC*GLSVSF
Trigger: AAAAGACACTGAAAGGCCTCAACAGTGAGTCCATGA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATGTTCAGAGATGGCATaGGAGATAACCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTCSEMA*EITLPS
Trigger: AGATGGAAGGGTTATCTCTCATGCCATCTCTGAACA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAAAAGTTTGGTCACCTaGAAATTAGTGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLKSLVT*KLVRRG
Trigger: CCCTCTCCTCACTAATTTTCAGGTGACCAAACTTTT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAACATGTGGCTCAGGTTaGTTTAATAATGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFITCGSG*FNNGAG
Trigger: CCCAGCCCCATTATTAAATCAACCTGAGCCACATGT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACCAGCCTGGAGAGTGTaGCTCCATCTCAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLPAWRV*LHLKKK
Trigger: TTTCTTTTTGAGATGGAGTCACACTCTCCAGGCTGG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGGGGGAGAGTGTGAATaGCAAAAATCTGATTATTTC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQGGECE*QKSDYF
Trigger: GAAATAATCAGATTTTTGTCATTCACACTCTCCCCC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATTCCAGGACAATGTGTaGTGTCTGTGCCTTGACAGA +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIFQDNV*CLCLDR
Trigger: TCTGTCAAGGCACAGACAGCACACATTGTCCTGGAA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATTCCAGGACAATGTGTaGTGTCTGTGCCTTGACAGA +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIFQDNV*CLCLDR
Trigger: TCTGTCAAGGCACAGACAGCACACATTGTCCTGGAA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGTCCACTCCATAAATTaGAGGAACCTTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDVHSIN*RNLFFL
Trigger: CAGGAAGAAAAGGTTCCTGCAATTTATGGAGTGGAC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATTCCAGGGAACTAAGTaGACTTCAGCTCCTCGCTTT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIFQGTK*TSAPRF
Trigger: AAAGCGAGGAGCTGAAGTGCACTTAGTTCCCTGGAA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATTATCTGAAAACAGCTaGCTGTCTTCCGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEALSENS*LSSVAI
Trigger: TATGGCTACGGAAGACAGGCAGCTGTTTTCAGATAA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATGCATTCACCCACAATaGCCAAGTGGCGAACAACAT +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLCIHPQ*PSGEQH
Trigger: ATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCATAGATACGCGTGCTaGTTGGTTCAGACAACTCTT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVHRYAC*LVQTTL
Trigger: AAGAGTTGTCTGAACCAAGCAGCACGCGTATCTATG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACATAGATACGCGTGCTaGTTGGTTCAGACAACTCTT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTHRYAC*LVQTTL
Trigger: AAGAGTTGTCTGAACCAAGCAGCACGCGTATCTATG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCATAGATACGCGTGCTaGTTGGTTCAGACAACTCTT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNHRYAC*LVQTTL
Trigger: AAGAGTTGTCTGAACCAAGCAGCACGCGTATCTATG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATGGCATAGATACGCGTaGTGCTTGGTTCAGACAACT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIWHRYA*CLVQTT
Trigger: AGTTGTCTGAACCAAGCAGCACGCGTATCTATGCCA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGAGGCATTTTGAAATCTaGTTATCTGAGAACCCAATC +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGRHFEI*LSENPI
Trigger: GATTGGGTTCTCAGATAAGCAGATTTCAAAATGCCT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAATCAAATTCCACACTaGTGCCAATGTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQNQIPH*CQCDMD
Trigger: GTCCATATCACATTGGCAGCAGTGTGGAATTTGATT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATCACAGTCTCAGGATTaGAATTCACCACCACCGTCT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKISQSQD*NSPPPS
Trigger: AGACGGTGGTGGTGAATTGCAATCCTGAGACTGTGA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAACTCATCAAAGTCTGTaGTCACAGTCTCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTTHQSL*SQSQDC
Trigger: GCAATCCTGAGACTGTGAGCACAGACTTTGATGAGT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGTAGTCCACAGACTTTaGAAATTCCAGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKVVHRL*KFQCFI
Trigger: AATGAAGCACTGGAATTTGCAAAGTCTGTGGACTAC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLDGKSL*NLPGSI
Trigger: GATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCATGGGAGCCTTAATTaGAACATAGTCAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLHGSLN*NIVSRN
Trigger: ATTCCTGCTGACTATGTTGCAATTAAGGCTCCCATG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGGAATGATTGCTGGATaGCTATCAGGATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMGMIAG*LSGCLS
Trigger: AGAAAGGCATCCTGATAGGCATCCAGCAATCATTCC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATACCTTGCGAGATTTCTaGACAGCTTCAGCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDTLRDF*TASAKS
Trigger: ACTTTTTGCTGAAGCTGTGCAGAAATCTCGCAAGGT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCTGCATCTCTATGCTaGTTTTCCAGCACTGTACTG +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSASLC*FSSTVL
Trigger: CAGTACAGTGCTGGAAAAGCAGCATAGAGATGCAGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAAGGAATGGTGTCCTTaGCCTTACAGTGGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIKEWCP*PYSGWN
Trigger: ATTCCACCCACTGTAAGGGCAAGGACACCATTCCTT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAATCATCTATGTATGTaGATGCATGCCCTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNNHLCM*MHALSP
Trigger: GGGAGAGAGGGCATGCATGCACATACATAGATGATT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCACAATCTTCCCAAGCATaGTACCCTTATCCCGAATTA +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAQSSQA*YPYPEL
Trigger: TAATTCGGGATAAGGGTACCATGCTTGGGAAGATTG...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTTCTCCACCAGAATTTaGTTGGTCATAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVFSTRI*LVIAKA
Trigger: GGCCTTTGCTATGACCAACCAAATTCTGGTGGAGAA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTCTCCACCAGAATTTaGTTGGTCATAGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNFSTRI*LVIAKA
Trigger: GGCCTTTGCTATGACCAACCAAATTCTGGTGGAGAA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCCTTCTATAGATGGGTaGCACATCCGTAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNPSIDG*HIRKAF
Trigger: GAAAGCTTTACGGATGTGCCACCCATCTATAGAAGG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCCTTCTATAGATGGGTaGCACATCCGTAAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMPSIDG*HIRKAF
Trigger: GAAAGCTTTACGGATGTGCCACCCATCTATAGAAGG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACCATTCTTTGTTCATTaGGAGACGGGGAGTGAAACC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLPFFVH*ETGSET
Trigger: GGTTTCACTCCCCGTCTCCCAATGAACAAAGAATGG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATGTCATCAATGGCCTTaGCAATGGCATAGATACGCG +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFICHQWP*QWHRYA
Trigger: CGCGTATCTATGCCATTGCCAAGGCCATTGATGACA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATGTCATCAATGGCCTTaGCAATGGCATAGATACGCG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKICHQWP*QWHRYA
Trigger: CGCGTATCTATGCCATTGCCAAGGCCATTGATGACA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATGTTTAACCCAAGGGTaGATGTTTTTCTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQCLTQG*MFFFNL
Trigger: GAGGTTAAAGAAAAACATCCACCCTTGGGTTAAACA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATAGGTTGTTTGGAATCTaGCCTCCAACTGATATGATG +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDRLFGI*PPTDMM
Trigger: CATCATATCAGTTGGAGGCCAGATTCCAAACAACCT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAAATTGGACGTTGAATaGACCAGAGATGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLKLDVE*TRDGKS
Trigger: GCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAGTCAGCAGGAATTATaGGATGGTCCAATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLSQQEL*DGPMLE
Trigger: TTCCAACATTGGACCATCCCATAATTCCTGCTGACT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCCTGGATTAGCCAAATaGGTGAGAATGAGGATCCAA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVPGLAK*VRMRIQ
Trigger: TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
3UTR CAA 72 bp CAACATAGTCAGCAGGAATTATGGGATGGTCCAATGTaGGAAGATGTTTCTCATCAACATTCTCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: QHSQQELWDGPM*EDVSHQHSLQS
Trigger: TGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACATTGGACCATCCCATAATTCCTGCTGACTATGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACTTTGCCGTACACTTTaGCATCCTTGGTTGAAACCT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILCRTL*HPWLKP
Trigger: AGGTTTCAACCAAGGATGTCAAAGTGTACGGCAAAG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATCTTTCTGACATTCTaGATTAGTGGTTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQIFLTF*ISGSAR
Trigger: TCTTGCAGAACCACTAATTCAGAATGTCAGAAAGAT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTTAAGTTTCCTGTACTaGTTCCAAACAATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDLSFLY*FQTMAP
Trigger: AGGAGCCATTGTTTGGAATCAGTACAGGAAACTTAA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCCATGTTACAGACAGTaGCACAATTGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNPCYRQ*HNCHQH
Trigger: ATGCTGATGACAATTGTGTCACTGTCTGTAACATGG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGCGAACAACATTGATTaGAGTACGTCTCAACATCTG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTANNID*STSQHL
Trigger: CAGATGTTGAGACGTACTTCAATCAATGTTGTTCGC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGCGAACAACATTGATTaGAGTACGTCTCAACATCTG +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQANNID*STSQHL
Trigger: CAGATGTTGAGACGTACTTCAATCAATGTTGTTCGC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACTTGTCAATGTATGTaGGCTTCTCAATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SWISQMGENEDPKRSNTQTCQCM*ASQSHQ
Trigger: TTGATGAGATTGAGAAGCTCACATACATTGACAAGT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGAGATAGTTTGTTACTaGTGGGTATTCTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLEIVCY*WVFCSQ
Trigger: CTGGCTGCAGAATACCCATCAGTAACAAACTATCTC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCATGGTCATCAAAATTaGCATCATGCTCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVHGHQN*HHAPDH
Trigger: ATGGTCAGGAGCATGATGTCAATTTTGATGACCATG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCATGGTCATCAAAATTaGCATCATGCTCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMHGHQN*HHAPDH
Trigger: ATGGTCAGGAGCATGATGTCAATTTTGATGACCATG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATGTTCAGAGATGGCATaGGAGATAACCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLCSEMA*EITLPS
Trigger: AGATGGAAGGGTTATCTCTCATGCCATCTCTGAACA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATGTTCAGAGATGGCATaGGAGATAACCCTTCCATCT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFICSEMA*EITLPS
Trigger: AGATGGAAGGGTTATCTCTCATGCCATCTCTGAACA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACAAGAAATTGGACGTTaGATGGACCAGAGATGGCAA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLQEIGR*MDQRWQ
Trigger: TTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAAAGTTTGGTCACCTaGAAATTAGTGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTKSLVT*KLVRRG
Trigger: CCCTCTCCTCACTAATTTTCAGGTGACCAAACTTTT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCAACTTTTCCTACCTTaGTCACCATTAATCAGCACC +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVQLFLP*SPLIST
Trigger: GGTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCTGTCTACCATCTGCTaGTATAGTCCAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLLSTIC*YSPENK
Trigger: TTTGTTTTCTGGACTATATCAGCAGATGGTAGACAG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAATCGTCTTAAGGGAATaGACCTTACTTCCAAGTTAT +
Preference number: 4 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKIVLRE*TLLPSY
Trigger: ATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGAT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTTTTCTGAAGCCGTCTaGATCATCTATGTATGTGCA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDFSEAV*IIYVCA
Trigger: TGCACATACATAGATGATTCAGACGGCTTCAGAAAA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGATGGGTTTGAACAATaGACTAAGAGCTCACACACA +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTDGFEQ*TKSSHT
Trigger: TGTGTGTGAGCTCTTAGTTCATTGTTCAAACCCATC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR GCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGTCCACTCCATAAATTaGAGGAACCTTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQVHSIN*RNLFFL
Trigger: CAGGAAGAAAAGGTTCCTGCAATTTATGGAGTGGAC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCAAACAATGGCTCCTTaGGATCACTCTCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMQTMAP*DHSPKS
Trigger: AGATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAAGGGTTTGCTCTCATaGATAATCCCCTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLKGLLS*IIPSFV
Trigger: AACAAATGAGGGGATTATGCATGAGAGCAAACCCTT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATAAGGGTTTGCTCTCATaGATAATCCCCTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDKGLLS*IIPSFV
Trigger: AACAAATGAGGGGATTATGCATGAGAGCAAACCCTT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTATCTGAAAACAGCTaGCTGTCTTCCGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNLSENS*LSSVAI
Trigger: TATGGCTACGGAAGACAGGCAGCTGTTTTCAGATAA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTTATCTGAAAACAGCTaGCTGTCTTCCGTAGCCATA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVLSENS*LSSVAI
Trigger: TATGGCTACGGAAGACAGGCAGCTGTTTTCAGATAA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACATAGATACGCGTGCTaGTTGGTTCAGACAACTCTT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIHRYAC*LVQTTL
Trigger: AAGAGTTGTCTGAACCAAGCAGCACGCGTATCTATG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAAATCAAATTCCACACTaGTGCCAATGTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEANQIPH*CQCDMD
Trigger: GTCCATATCACATTGGCAGCAGTGTGGAATTTGATT...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAACTCATCAAAGTCTGTaGTCACAGTCTCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKITHQSL*SQSQDC
Trigger: GCAATCCTGAGACTGTGAGCACAGACTTTGATGAGT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAACTCATCAAAGTCTGTaGTCACAGTCTCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFITHQSL*SQSQDC
Trigger: GCAATCCTGAGACTGTGAGCACAGACTTTGATGAGT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGTAGTCCACAGACTTTaGAAATTCCAGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDVVHRL*KFQCFI
Trigger: AATGAAGCACTGGAATTTGCAAAGTCTGTGGACTAC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCATGGGAGCCTTAATTaGAACATAGTCAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMHGSLN*NIVSRN
Trigger: ATTCCTGCTGACTATGTTGCAATTAAGGCTCCCATG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACATGGGAGCCTTAATTaGAACATAGTCAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTHGSLN*NIVSRN
Trigger: ATTCCTGCTGACTATGTTGCAATTAAGGCTCCCATG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCATGGGAGCCTTAATTaGAACATAGTCAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVHGSLN*NIVSRN
Trigger: ATTCCTGCTGACTATGTTGCAATTAAGGCTCCCATG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGGAATGATTGCTGGATaGCTATCAGGATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLGMIAG*LSGCLS
Trigger: AGAAAGGCATCCTGATAGGCATCCAGCAATCATTCC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGAATGATTGCTGGATaGCTATCAGGATGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGMIAG*LSGCLS
Trigger: AGAAAGGCATCCTGATAGGCATCCAGCAATCATTCC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAACCTTGCGAGATTTCTaGACAGCTTCAGCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTTLRDF*TASAKS
Trigger: ACTTTTTGCTGAAGCTGTGCAGAAATCTCGCAAGGT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAAAAGTAACAAAGGCTaGCCTTGGGGAGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNKSNKG*PWGETF
Trigger: AAAAGTCTCTCCCCAAGGGCAGCCTTTGTTACTTTT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAAAGTAACAAAGGCTaGCCTTGGGGAGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTKSNKG*PWGETF
Trigger: AAAAGTCTCTCCCCAAGGGCAGCCTTTGTTACTTTT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCAATCTTCCCAAGCATaGTACCCTTATCCCGAATTA +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMQSSQA*YPYPEL
Trigger: TAATTCGGGATAAGGGTACCATGCTTGGGAAGATTG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCAAATTCTGTTTATTTaGATCCACAAAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGQILFI*IHKIHR
Trigger: CCTGTGGATTTTGTGGATCCAAATAAACAGAATTTG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGATCTTGGTGAAATCATaGTTCCAGGGAACTAAGTGC +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVILVKS*FQGTKC
Trigger: GCACTTAGTTCCCTGGAACCATGATTTCACCAAGAT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAACTGATTCCAAACAATaGCTCCTTGCGATCACTCTC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLTDSKQ*LLAITL
Trigger: GAGAGTGATCGCAAGGAGCCATTGTTTGGAATCAGT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCTGTGTGAACACCCATaGCATCAACATTTTCCATGT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNLCEHP*HQHFPC
Trigger: ACATGGAAAATGTTGATGCCATGGGTGTTCACACAG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACTGTGTGAACACCCATaGCATCAACATTTTCCATGT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTLCEHP*HQHFPC
Trigger: ACATGGAAAATGTTGATGCCATGGGTGTTCACACAG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACCCACAATGCCCAAGTaGCGAACAACATTGATTGAA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLPTMPK*RTTLIE
Trigger: TTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGATACGCGTGCTGCTTaGTTCAGACAACTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLDTRAA*FRQLFS
Trigger: AGAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAAATTGGACGTTGAATaGACCAGAGATGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMKLDVE*TRDGKS
Trigger: GCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGGGATGGTCCAATGTTaGAAGATGTTTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQGMVQC*KMFLIN
Trigger: GTTGATGAGAAACATCTTCCAACATTGGACCATCCC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGTCAGCAGGAATTATaGGATGGTCCAATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSQQEL*DGPMLE
Trigger: TTCCAACATTGGACCATCCCATAATTCCTGCTGACT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAATCAGGATGCCTTTCTaGGGTATCTTAAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTIRMPF*GILNPV
Trigger: CACAGGATTTAAGATACCCCAGAAAGGCATCCTGAT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACATCAGGATGCCTTTCTaGGGTATCTTAAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNIRMPF*GILNPV
Trigger: CACAGGATTTAAGATACCCCAGAAAGGCATCCTGAT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAATCAGGATGCCTTTCTaGGGTATCTTAAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQIRMPF*GILNPV
Trigger: CACAGGATTTAAGATACCCCAGAAAGGCATCCTGAT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATCCTTGCCCTTACAGTaGGTGGAATTAATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLSLPLQ*VELIVQ
Trigger: CTGCACTATTAATTCCACCCACTGTAAGGGCAAGGA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATCCTTGCCCTTACAGTaGGTGGAATTAATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFISLPLQ*VELIVQ
Trigger: CTGCACTATTAATTCCACCCACTGTAAGGGCAAGGA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGATCTTTCTGACATTCTaGATTAGTGGTTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLIFLTF*ISGSAR
Trigger: TCTTGCAGAACCACTAATTCAGAATGTCAGAAAGAT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTAAGTTTCCTGTACTaGTTCCAAACAATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNLSFLY*FQTMAP
Trigger: AGGAGCCATTGTTTGGAATCAGTACAGGAAACTTAA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAAAGCCTGTTTGTTTGTaGTATTCAAAACAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAKPVCL*YSKQAD
Trigger: ATCAGCCTGTTTTGAATATCACAAACAAACAGGCTT...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACCATGTTACAGACAGTaGCACAATTGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIPCYRQ*HNCHQH
Trigger: ATGCTGATGACAATTGTGTCACTGTCTGTAACATGG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACCATGTTACAGACAGTaGCACAATTGTCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLPCYRQ*HNCHQH
Trigger: ATGCTGATGACAATTGTGTCACTGTCTGTAACATGG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGCGAACAACATTGATTaGAGTACGTCTCAACATCTG +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIANNID*STSQHL
Trigger: CAGATGTTGAGACGTACTTCAATCAATGTTGTTCGC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAGTGGCGAACAACATTaGTTGAAGTACGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLSGEQH*LKYVST
Trigger: TGTTGAGACGTACTTCAATCAATGTTGTTCGCCACT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAGTGGCGAACAACATTaGTTGAAGTACGTCTCAACA +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFISGEQH*LKYVST
Trigger: TGTTGAGACGTACTTCAATCAATGTTGTTCGCCACT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATACTTGTCAATGTATGTaGGCTTCTCAATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDTCQCM*ASQSHQ
Trigger: TTGATGAGATTGAGAAGCTCACATACATTGACAAGT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACATGGTCATCAAAATTaGCATCATGCTCCTGACCAT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIHGHQN*HHAPDH
Trigger: ATGGTCAGGAGCATGATGTCAATTTTGATGACCATG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATTTAGGAAGGCTGTATaGATACCTTCACCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQFRKAV*IPSPKQ
Trigger: TTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAAAAGTTTGGTCACCTaGAAATTAGTGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIKSLVT*KLVRRG
Trigger: CCCTCTCCTCACTAATTTTCAGGTGACCAAACTTTT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCTGTCTACCATCTGCTaGTATAGTCCAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNLSTIC*YSPENK
Trigger: TTTGTTTTCTGGACTATATCAGCAGATGGTAGACAG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCTGTCTACCATCTGCTaGTATAGTCCAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVLSTIC*YSPENK
Trigger: TTTGTTTTCTGGACTATATCAGCAGATGGTAGACAG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTGTCTACCATCTGCTaGTATAGTCCAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLSTIC*YSPENK
Trigger: TTTGTTTTCTGGACTATATCAGCAGATGGTAGACAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGGGGGAGAGTGTGAATaGCAAAAATCTGATTATTTC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTGGECE*QKSDYF
Trigger: GAAATAATCAGATTTTTGTCATTCACACTCTCCCCC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGGGGGAGAGTGTGAATaGCAAAAATCTGATTATTTC +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNGGECE*QKSDYF
Trigger: GAAATAATCAGATTTTTGTCATTCACACTCTCCCCC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGATCGTCTTAAGGGAATaGACCTTACTTCCAAGTTAT +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLIVLRE*TLLPSY
Trigger: ATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGAT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACTTGTGGTTCTTTTCTaGAGCCGTCTGAATCATCTA +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILVVLF*SRLNHL
Trigger: TAGATGATTCAGACGGCTTCAGAAAAGAACCACAAG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR GCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGTCCACTCCATAAATTaGAGGAACCTTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLVHSIN*RNLFFL
Trigger: CAGGAAGAAAAGGTTCCTGCAATTTATGGAGTGGAC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAGGGTTTGCTCTCATaGATAATCCCCTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTKGLLS*IIPSFV
Trigger: AACAAATGAGGGGATTATGCATGAGAGCAAACCCTT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACTCAATCGATTCCACTaGAAAACTTGGAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTLNRFH*KTWSNL
Trigger: AAGATTGCTCCAAGTTTTGCAGTGGAATCGATTGAG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTCAATCGATTCCACTaGAAAACTTGGAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLNRFH*KTWSNL
Trigger: AAGATTGCTCCAAGTTTTGCAGTGGAATCGATTGAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAATCAAATTCCACACTaGTGCCAATGTGATATGGAC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTNQIPH*CQCDMD
Trigger: GTCCATATCACATTGGCAGCAGTGTGGAATTTGATT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGTAGTCCACAGACTTTaGAAATTCCAGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMVVHRL*KFQCFI
Trigger: AATGAAGCACTGGAATTTGCAAAGTCTGTGGACTAC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATACATGGGAGCCTTAATTaGAACATAGTCAGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIHGSLN*NIVSRN
Trigger: ATTCCTGCTGACTATGTTGCAATTAAGGCTCCCATG...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAACCTTGCGAGATTTCTaGACAGCTTCAGCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKITLRDF*TASAKS
Trigger: ACTTTTTGCTGAAGCTGTGCAGAAATCTCGCAAGGT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAACCTTGCGAGATTTCTaGACAGCTTCAGCAAAAAGT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFITLRDF*TASAKS
Trigger: ACTTTTTGCTGAAGCTGTGCAGAAATCTCGCAAGGT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATTTTCATCAGGAAAATaGAAACTTCACTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTFSSGK*KLHCSL
Trigger: GAGGGAGCAGTGAAGTTTGCATTTTCCTGATGAAAA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAATCTTGGTGAAATCATaGTTCCAGGGAACTAAGTGC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIILVKS*FQGTKC
Trigger: GCACTTAGTTCCCTGGAACCATGATTTCACCAAGAT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCACATTTTCTTCCTTCATaGCTTTTACAGCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAHFLPS*LLQLEI
Trigger: GATCTCAAGCTGTAAAAGCCATGAAGGAAGAAAATG...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCATTTTCTTCCTTCATaGCTTTTACAGCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLHFLPS*LLQLEI
Trigger: GATCTCAAGCTGTAAAAGCCATGAAGGAAGAAAATG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGATCCGTAAAGCTTTCTaGAAACTCTCCTCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVIRKAF*KLSSKV
Trigger: TACCTTTGAGGAGAGTTTCCAGAAAGCTTTACGGAT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACATCCGTAAAGCTTTCTaGAAACTCTCCTCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNIRKAF*KLSSKV
Trigger: TACCTTTGAGGAGAGTTTCCAGAAAGCTTTACGGAT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTGTTTAACCCAAGGGTaGATGTTTTTCTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDCLTQG*MFFFNL
Trigger: GAGGTTAAAGAAAAACATCCACCCTTGGGTTAAACA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTGTTTAACCCAAGGGTaGATGTTTTTCTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLCLTQG*MFFFNL
Trigger: GAGGTTAAAGAAAAACATCCACCCTTGGGTTAAACA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATAGCACCATCATTCCATaGTCATCAAAATTGACATCA +
Preference number: 4 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDSTIIP*SSKLTS
Trigger: TGATGTCAATTTTGATGACCATGGAATGATGGTGCT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAGCACCATCATTCCATaGTCATCAAAATTGACATCA +
Preference number: 4 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLSTIIP*SSKLTS
Trigger: TGATGTCAATTTTGATGACCATGGAATGATGGTGCT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAGGTTGTTTGGAATCTaGCCTCCAACTGATATGATG +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIRLFGI*PPTDMM
Trigger: CATCATATCAGTTGGAGGCCAGATTCCAAACAACCT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAAATTGGACGTTGAATaGACCAGAGATGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIKLDVE*TRDGKS
Trigger: GCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAATTGGACGTTGAATaGACCAGAGATGGCAAAAGC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLKLDVE*TRDGKS
Trigger: GCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGGGATGGTCCAATGTTaGAAGATGTTTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLGMVQC*KMFLIN
Trigger: GTTGATGAGAAACATCTTCCAACATTGGACCATCCC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGGATGGTCCAATGTTaGAAGATGTTTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGMVQC*KMFLIN
Trigger: GTTGATGAGAAACATCTTCCAACATTGGACCATCCC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGGGATGGTCCAATGTTaGAAGATGTTTCTCATCAAC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIGMVQC*KMFLIN
Trigger: GTTGATGAGAAACATCTTCCAACATTGGACCATCCC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAGTCAGCAGGAATTATaGGATGGTCCAATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLSQQEL*DGPMLE
Trigger: TTCCAACATTGGACCATCCCATAATTCCTGCTGACT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAGTCAGCAGGAATTATaGGATGGTCCAATGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFISQQEL*DGPMLE
Trigger: TTCCAACATTGGACCATCCCATAATTCCTGCTGACT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAATCAGGATGCCTTTCTaGGGTATCTTAAATCCTGTG +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIIRMPF*GILNPV
Trigger: CACAGGATTTAAGATACCCCAGAAAGGCATCCTGAT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAAGATGCAAGCGAGGCTaGGAATTCAAGTTCAAAATC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIRCKRG*EFKFKI
Trigger: GATTTTGAACTTGAATTCCCAGCCTCGCTTGCATCT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR TCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAATCTTTCTGACATTCTaGATTAGTGGTTCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQIFLTF*ISGSAR
Trigger: TCTTGCAGAACCACTAATTCAGAATGTCAGAAAGAT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGACTTGTCAATGTATGTaGGCTTCTCAATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVTCQCM*ASQSHQ
Trigger: TTGATGAGATTGAGAAGCTCACATACATTGACAAGT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATTTAGGAAGGCTGTATaGATACCTTCACCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLFRKAV*IPSPKQ
Trigger: TTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATTTAGGAAGGCTGTATaGATACCTTCACCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIFRKAV*IPSPKQ
Trigger: TTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATACTGTCTACCATCTGCTaGTATAGTCCAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKILSTIC*YSPENK
Trigger: TTTGTTTTCTGGACTATATCAGCAGATGGTAGACAG...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACTGTCTACCATCTGCTaGTATAGTCCAGAAAACAAA +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILSTIC*YSPENK
Trigger: TTTGTTTTCTGGACTATATCAGCAGATGGTAGACAG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGGGGAGAGTGTGAATaGCAAAAATCTGATTATTTC +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGGECE*QKSDYF
Trigger: GAAATAATCAGATTTTTGTCATTCACACTCTCCCCC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACATCGTCTTAAGGGAATaGACCTTACTTCCAAGTTAT +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNIVLRE*TLLPSY
Trigger: ATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGAT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCATACTGGATGCTTTTaGACTAAAGTTTCAATTGGG +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNHTGCF*TKVSIG
Trigger: CCCAATTGAAACTTTAGTTCAAAAGCATCCAGTATG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAAGGGTTTGCTCTCATaGATAATCCCCTCATTTGTT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIKGLLS*IIPSFV
Trigger: AACAAATGAGGGGATTATGCATGAGAGCAAACCCTT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACTCAATCGATTCCACTaGAAAACTTGGAGCAATCTT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILNRFH*KTWSNL
Trigger: AAGATTGCTCCAAGTTTTGCAGTGGAATCGATTGAG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGCATTTTGAAATCTaGTTATCTGAGAACCCAATC +
Preference number: 4 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMRHFEI*LSENPI
Trigger: GATTGGGTTCTCAGATAAGCAGATTTCAAAATGCCT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGGCATTTTGAAATCTaGTTATCTGAGAACCCAATC +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVRHFEI*LSENPI
Trigger: GATTGGGTTCTCAGATAAGCAGATTTCAAAATGCCT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGTAGTCCACAGACTTTaGAAATTCCAGTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIVVHRL*KFQCFI
Trigger: AATGAAGCACTGGAATTTGCAAAGTCTGTGGACTAC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAGCACCATCATTCCATaGTCATCAAAATTGACATCA +
Preference number: 4 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNSTIIP*SSKLTS
Trigger: TGATGTCAATTTTGATGACCATGGAATGATGGTGCT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAAGCACCATCATTCCATaGTCATCAAAATTGACATCA +
Preference number: 4 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQSTIIP*SSKLTS
Trigger: TGATGTCAATTTTGATGACCATGGAATGATGGTGCT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGCACCATCATTCCATaGTCATCAAAATTGACATCA +
Preference number: 4 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSTIIP*SSKLTS
Trigger: TGATGTCAATTTTGATGACCATGGAATGATGGTGCT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR TCA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAAAGCCTGTTTGTTTGTaGTATTCAAAACAGGCTGAT +
Preference number: 4 (lower is better)
Translates to: EYSALLKCPEFADSVLKIKPVCL*YSKQAD
Trigger: ATCAGCCTGTTTTGAATATCACAAACAAACAGGCTT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR TCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAACTTGTCAATGTATGTaGGCTTCTCAATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLTCQCM*ASQSHQ
Trigger: TTGATGAGATTGAGAAGCTCACATACATTGACAAGT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAGGCATTTTGAAATCTaGTTATCTGAGAACCCAATC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLRHFEI*LSENPI
Trigger: GATTGGGTTCTCAGATAAGCAGATTTCAAAATGCCT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR GCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAGGCATTTTGAAATCTaGTTATCTGAGAACCCAATC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIRHFEI*LSENPI
Trigger: GATTGGGTTCTCAGATAAGCAGATTTCAAAATGCCT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACAAATTCTGTTTATTTaGATCCACAAAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTQILFI*IHKIHR
Trigger: CCTGTGGATTTTGTGGATCCAAATAAACAGAATTTG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACATTTTCTTCCTTCATaGCTTTTACAGCTTGAGATC +
Preference number: 4 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIHFLPS*LLQLEI
Trigger: GATCTCAAGCTGTAAAAGCCATGAAGGAAGAAAATG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATGTTTAACCCAAGGGTaGATGTTTTTCTTTAACCTC +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLCLTQG*MFFFNL
Trigger: GAGGTTAAAGAAAAACATCCACCCTTGGGTTAAACA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAGCACCATCATTCCATaGTCATCAAAATTGACATCA +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLSTIIP*SSKLTS
Trigger: TGATGTCAATTTTGATGACCATGGAATGATGGTGCT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CCA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACAAATTCTGTTTATTTaGATCCACAAAATCCACAGG +
Preference number: 4 (lower is better)
Translates to: FLEYSALLKCPEFADSVLQILFI*IHKIHR
Trigger: CCTGTGGATTTTGTGGATCCAAATAAACAGAATTTG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS TCA 90 bp AGCTTTCCAAGGTGCCTGAGCCACCTTCAGCTCATCCAAGACAGCTaGGAAGATGGAGCGATCCTCAGCCCTGTCGATCTGCAGGGGGCT +
Preference number: 5 (lower is better)
Translates to: SFPRCLSHLQLIQDS*EDGAILSPVDLQGA
Trigger: AGCCCCCTGCAGATCGACAGGGCTGAGGATCGCTCCATCTTCTCAGCTGTCTTGGATGAGCTGAAGGTGGCTCAGGCACCTTGGAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 90 bp TCAAACAGGTACTCAGTGTCTATTGGCCCCGGGGTGACCTCTGGGTaGAACTGCACAGCGAAGAAGGGTTTGCTCTCATGCATAATCCCC +
Preference number: 5 (lower is better)
Translates to: SNRYSVSIGPGVTSG*NCTAKKGLLSCIIP
Trigger: GGGGATTATGCATGAGAGCAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAGACACTGAGTACCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CCA 90 bp ACCCACCCAGTGCATAGGCGGAACGGATCATCACTGGGTAGCCAATaGTGTCTGCTGCCTTCAGTGCATCCTCAATCGATTCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: THPVHRRNGSSLGSQ*CLLPSVHPQSIPLQ
Trigger: TTGCAGTGGAATCGATTGAGGATGCACTGAAGGCAGCAGACACCATTGGCTACCCAGTGATGATCCGTTCCGCCTATGCACTGGGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 90 bp GGTTTGTCTGACTGGTGGGGCTTGGGTCACGTGCCTGTGTCTAGATaGAAGCGAGGCTGGGAATTCAAGTTCAAAATCCATGTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLSDWWGLGHVPVSR*KRGWEFKFKIHVGQ
Trigger: CTGCCCTACATGGATTTTGAACTTGAATTCCCAGCCTCGCTTGCATCTAGACACAGGCACGTGACCCAAGCCCCACCAGTCAGACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS GCA 90 bp TGCATAGGCGGAACGGATCATCACTGGGTAGCCAATGGTGTCTGCTaGCTTCAGTGCATCCTCAATCGATTCCACTGCAAAACTTGGAGC +
Preference number: 5 (lower is better)
Translates to: CIGGTDHHWVANGVC*LQCILNRFHCKTWS
Trigger: GCTCCAAGTTTTGCAGTGGAATCGATTGAGGATGCACTGAAGGCAGCAGACACCATTGGCTACCCAGTGATGATCCGTTCCGCCTATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 90 bp CAGTGCATAGGCGGAACGGATCATCACTGGGTAGCCAATGGTGTCTaGTGCCTTCAGTGCATCCTCAATCGATTCCACTGCAAAACTTGG +
Preference number: 5 (lower is better)
Translates to: QCIGGTDHHWVANGV*CLQCILNRFHCKTW
Trigger: CCAAGTTTTGCAGTGGAATCGATTGAGGATGCACTGAAGGCAGCAGACACCATTGGCTACCCAGTGATGATCCGTTCCGCCTATGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 90 bp GGAATCAAACAGGTACTCAGTGTCTATTGGCCCCGGGGTGACCTCTaGGTGGAACTGCACAGCGAAGAAGGGTTTGCTCTCATGCATAAT +
Preference number: 5 (lower is better)
Translates to: GIKQVLSVYWPRGDL*VELHSEEGFALMHN
Trigger: ATTATGCATGAGAGCAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAGACACTGAGTACCTGTTTGATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGTGGCAGGGACATTGTaGGCGTTGAGCCAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVVAGTL*ALSQSD
Trigger: ATCAGACTGGCTCAACGCCAACAATGTCCCTGCCAC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGGGATTCTGTCCTTCTaGAGACGGCCATGCCACTGG +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWGILSF*RRPCHW
Trigger: CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS GCA 90 bp GACAAGAAATTGGACGTTGAATGGACCAGAGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATCCTTCACCTGCTGGGAGGTACAGGC +
Preference number: 5 (lower is better)
Translates to: DKKLDVEWTRDGKSL*NLPGSILHLLGGTG
Trigger: GCCTGTACCTCCCAGCAGGTGAAGGATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645825.1
CDS CCA 90 bp CTGGATGCTTTTGAACTAAAGTTTCAATTGGGTTTGTCTGACTGGTaGGGCTTGGGTCACGTGCCTGTGTCTAGATGCAAGCGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: LDAFELKFQLGLSDW*GLGHVPVSRCKRGW
Trigger: CCAGCCTCGCTTGCATCTAGACACAGGCACGTGACCCAAGCCCCACCAGTCAGACAAACCCAATTGAAACTTTAGTTCAAAAGCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGAACTGCCAGGTTGTTaGGAATCTGGCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVELPGC*ESGLQL
Trigger: CAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGGGACATTGTTGGCGTaGAGCCAGTCTGATGTGGCT +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWGTLLA*SQSDVA
Trigger: AGCCACATCAGACTGGCTCAACGCCAACAATGTCCC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS CCA 90 bp TGGTGGGGCTTGGGTCACGTGCCTGTGTCTAGATGCAAGCGAGGCTaGGAATTCAAGTTCAAAATCCATGTAGGGCAGGAAATACTCATA +
Preference number: 5 (lower is better)
Translates to: WWGLGHVPVSRCKRG*EFKFKIHVGQEILI
Trigger: TATGAGTATTTCCTGCCCTACATGGATTTTGAACTTGAATTCCCAGCCTCGCTTGCATCTAGACACAGGCACGTGACCCAAGCCCCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTGGTAGCCAGTGGCTTTaGAGGCCAGAGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSGSQWL*RPEQSF
Trigger: GAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTACC...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCTCACAGTCTCAGGATaGCAATTCACCACCACCGTC +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWLTVSG*QFTTTV
Trigger: GACGGTGGTGGTGAATTGCAATCCTGAGACTGTGAG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGAGATTTCTTTTCAATGGCCCCTaGGCTGATGGTTTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: STVLPVVEKTLGVHLARFLFNGP*ADGLCG
Trigger: CCCACACAAACCATCAGCCAAGGGGCCATTGAAAAG...AAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCCACACCAAGGAATCTaGGCCGGAATGATTGCTGGA +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWPHQGI*AGMIAG
Trigger: TCCAGCAATCATTCCGGCCAAGATTCCTTGGTGTGG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCAACATTCTCTCCAATCATCACCTTGGTGGCCACATCAATGAAGTCAACCCCGGGACATTGTTGGCGTaGAGCCAGTCTGATGTGGCT +
Preference number: 5 (lower is better)
Translates to: INILSNHHLGGHINEVNPGTLLA*SQSDVA
Trigger: AGCCACATCAGACTGGCTCAACGCCAACAATGTCCC...GGGGTTGACTTCATTGATGTGGCCACCAAGGTGATGATTGGAGAGAATGTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGAAGGAATGGTGTCCTaGCCCTTACAGTGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWEGMVS*PLQWVE
Trigger: TTCCACCCACTGTAAGGGCAAGGACACCATTCCTTC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS TCA 90 bp ATGCCCAAGTGGCGAACAACATTGATTGAAGTACGTCTCAACATCTaGAACTCGGCATTGGAGAGTGTCTGGGCAGGAGCCACAACAACT +
Preference number: 5 (lower is better)
Translates to: MPKWRTTLIEVRLNI*NSALESVWAGATTT
Trigger: AGTTGTTGTGGCTCCTGCCCAGACACTCTCCAATGCCGAGTTTCAGATGTTGAGACGTACTTCAATCAATGTTGTTCGCCACTTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 90 bp AGCTCCCTTGTCTGGGCCTCAGTGAGCCCAAGGCATTTTGAAATCTaGTTATCTGAGAACCCAATCTCCTTTGCCCTTTTCAGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SSLVWASVSPRHFEI*LSENPISFALFRVS
Trigger: AGAAACCCTGAAAAGGGCAAAGGAGATTGGGTTCTCAGATAAGCAGATTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAAGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 90 bp ACAGTTTGTCACACTCATCAAAGTCTGTGCTCACAGTCTCAGGATTaGAATTCACCACCACCGTCTTCTTGCCAAGTTGACGCAGTGTGC +
Preference number: 5 (lower is better)
Translates to: TVCHTHQSLCSQSQD*NSPPPSSCQVDAVC
Trigger: GCACACTGCGTCAACTTGGCAAGAAGACGGTGGTGGTGAATTGCAATCCTGAGACTGTGAGCACAGACTTTGATGAGTGTGACAAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 90 bp ACCTGTCTAGTGTCCAGCCCCTACCTTCCCTGGATTCCTGACCATTaGCATCAGGAGTTCCCTATTTCTGAACATACTTCCTGTGATCAA +
Preference number: 5 (lower is better)
Translates to: TCLVSSPYLPWIPDH*HQEFPISEHTSCDQ
Trigger: TTGATCACAGGAAGTATGTTCAGAAATAGGGAACTCCTGATGGCAATGGTCAGGAATCCAGGGAAGGTAGGGGCTGGACACTAGACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS CCA 90 bp ATACTGGATGCTTTTGAACTAAAGTTTCAATTGGGTTTGTCTGACTaGTGGGGCTTGGGTCACGTGCCTGTGTCTAGATGCAAGCGAGGC +
Preference number: 5 (lower is better)
Translates to: ILDAFELKFQLGLSD*WGLGHVPVSRCKRG
Trigger: GCCTCGCTTGCATCTAGACACAGGCACGTGACCCAAGCCCCACCAGTCAGACAAACCCAATTGAAACTTTAGTTCAAAAGCATCCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTTTGAGCACACCTCTCTaGAATAGTTCCACTCCACAG +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVLSTPL*NSSTPQ
Trigger: CTGTGGAGTGGAACTATTCAAGAGAGGTGTGCTCAA...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGCATGAGAGATAACCCTTCCATCTTTGCCAACAGCGTCCATTTCTACTTCTCGATCAAAGTCTCTCTGTaGGGACAGATGCCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: GMRDNPSIFANSVHFYFSIKVSL*GQMPEP
Trigger: AGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGAT...CGAGAAGTAGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTATCTCTCATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTCTTCTCCACCAGAATTaGGTTGGTCATAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVLLHQN*VGHSKG
Trigger: GCCTTTGCTATGACCAACCAAATTCTGGTGGAGAAG...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTAGATACGCGTGCTGCTaGGTTCAGACAACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVRYACC*VQTTLF
Trigger: GAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATCT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCAACATTCTCTCCAATCATCACCTTGGTGGCCACATCAATGAAGTCAACCCCCGTCTTCTTGCCAAGTaGACGCAGTGTGCGGATACT +
Preference number: 5 (lower is better)
Translates to: INILSNHHLGGHINEVNPRLLAK*TQCADT
Trigger: AGTATCCGCACACTGCGTCAACTTGGCAAGAAGACG...GGGGTTGACTTCATTGATGTGGCCACCAAGGTGATGATTGGAGAGAATGTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp TTTTCCAGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGTCTCCAATCATCACCTaGGTGGCCACATCAATGAAG +
Preference number: 5 (lower is better)
Translates to: FSSTVLPVVEKTLGVHLASPIIT*VATSMK
Trigger: CTTCATTGATGTGGCCACCAAGGTGATGATTGGAGA...CGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS TCA 90 bp CCAAGCATGGGTTCCTCTACCCACGATTACACTTACAACCCAAACTaGCTGCCCCCTCATTTATACGCATTTCATTTCCACACAGGCTTC +
Preference number: 5 (lower is better)
Translates to: PSMGSSTHDYTYNPN*LPPHLYAFHFHTGF
Trigger: GAAGCCTGTGTGGAAATGAAATGCGTATAAATGAGGGGGCAGTCAGTTTGGGTTGTAAGTGTAATCGTGGGTAGAGGAACCCATGCTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS GCA 90 bp GCATGGGTTCCTCTACCCACGATTACACTTACAACCCAAACTGACTaGCCCCTCATTTATACGCATTTCATTTCCACACAGGCTTCCCTA +
Preference number: 5 (lower is better)
Translates to: AWVPLPTITLTTQTD*PLIYTHFISTQASL
Trigger: TAGGGAAGCCTGTGTGGAAATGAAATGCGTATAAATGAGGGGGCAGTCAGTTTGGGTTGTAAGTGTAATCGTGGGTAGAGGAACCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS CCA 90 bp CCCTCCCAGGCCAGTATTAAAAACCACTTCACCAGCAACAGAGGATaGATGGCCAAAGGAGTAACCTTTCATCTTAGTTCCATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: PSQASIKNHFTSNRG*MAKGVTFHLSSIFQ
Trigger: CTGGAAGATGGAACTAAGATGAAAGGTTACTCCTTTGGCCATCCATCCTCTGTTGCTGGTGAAGTGGTTTTTAATACTGGCCTGGGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CCA 90 bp GGAGTGAAACCTTCTATAGATGGGTGGCACATCCGTAAAGCTTTCTaGAAACTCTCCTCAAAGGTACGACCAATAGCCATGACCTCTCCT +
Preference number: 5 (lower is better)
Translates to: GVKPSIDGWHIRKAF*KLSSKVRPIAMTSP
Trigger: AGGAGAGGTCATGGCTATTGGTCGTACCTTTGAGGAGAGTTTCCAGAAAGCTTTACGGATGTGCCACCCATCTATAGAAGGTTTCACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCCAAACAATGGCTCCTaGCGATCACTCTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWPNNGS*RSLSKI
Trigger: GATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTGG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTCCTAGAATAAGGACTTaGGAAACCTCAACCCGAGAT +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVPRIRT*ETSTRD
Trigger: ATCTCGGGTTGAGGTTTCCAAAGTCCTTATTCTAGG...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTTTAAGCCCACCTCATaGGTCTGGACTGATGCAATG +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWFKPTS*VWTDAM
Trigger: CATTGCATCAGTCCAGACCAATGAGGTGGGCTTAAA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673711.1
CDS-3UTR CAA 90 bp AGCACTGTACTGCCTGTAGTGGAAAAGACTCTTGGAGTCCACCTTGCGAGATTTCTTCTCCACCAGAATTaGGTTGGTCATAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: STVLPVVEKTLGVHLARFLLHQN*VGHSKG
Trigger: GCCTTTGCTATGACCAACCAAATTCTGGTGGAGAAG...AAATCTCGCAAGGTGGACTCCAAGAGTCTTTTCCACTACAGGCAGTACAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGGTAGCCAGTGGCTTTaGAGGCCAGAGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQGSQWL*RPEQSF
Trigger: GAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTACC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGTCATGGACTCACTGTaGAGGCCTTTCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWVMDSL*RPFSVF
Trigger: AAAGACACTGAAAGGCCTCAACAGTGAGTCCATGAC...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAAACAAAGGGGAAGGATCGAGAAGCTCTCAAGTTACACTCAATCACCAAGACAGAACTGCCAGGTTGTTaGGAATCTGGCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: ETKGKDREALKLHSITKTELPGC*ESGLQL
Trigger: CAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTC...TGTCTTGGTGATTGAGTGTAACTTGAGAGCTTCTCGATCCTTCCCCTTTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAGAGGAACTGCCAGGTaGTTTGGAATCTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSRGTAR*FGIWPP
Trigger: TGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTACAAGAAATTGGACGTaGAATGGACCAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVTRNWT*NGPEMA
Trigger: TGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTCTCCAATCATCACCTaGGTGGCCACATCAATGAAG +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWSPIIT*VATSMK
Trigger: CTTCATTGATGTGGCCACCAAGGTGATGATTGGAGA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCTCTTGGAGTCCACCTaGCGAGATTTCTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSLLEST*RDFCTA
Trigger: AGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGAG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTCTGACAATGAAGATTaGCTACTGGAGGCCCCTGGG +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSSDNED*LLEAPG
Trigger: CCCAGGGGCCTCCAGTAGCAAATCTTCATTGTCAGA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS TCA 90 bp CTGTTTCAGTGTTGTCCCCCAGGTGGAAAAGATAAATATCCAACATaGCAGTATCGACAGTTCCCAGCCAGGAAACCACTCTACCTTCTG +
Preference number: 5 (lower is better)
Translates to: LFQCCPPGGKDKYPT*QYRQFPARKPLYLL
Trigger: CAGAAGGTAGAGTGGTTTCCTGGCTGGGAACTGTCGATACTGTCATGTTGGATATTTATCTTTTCCACCTGGGGGACAACACTGAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS CCA 90 bp TCTTTGTTCATTGGGAGACGGGGAGTGAAACCTTCTATAGATGGGTaGCACATCCGTAAAGCTTTCTGGAAACTCTCCTCAAAGGTACGA +
Preference number: 5 (lower is better)
Translates to: SLFIGRRGVKPSIDG*HIRKAFWKLSSKVR
Trigger: TCGTACCTTTGAGGAGAGTTTCCAGAAAGCTTTACGGATGTGCCACCCATCTATAGAAGGTTTCACTCCCCGTCTCCCAATGAACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 90 bp TTAACCCAAGGGTGGATGTTTTTCTTTAACCTCAGCTCCCTTGTCTaGGCCTCAGTGAGCCCAAGGCATTTTGAAATCTGCTTATCTGAG +
Preference number: 5 (lower is better)
Translates to: LTQGWMFFFNLSSLV*ASVSPRHFEICLSE
Trigger: CTCAGATAAGCAGATTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAAGGGAGCTGAGGTTAAAGAAAAACATCCACCCTTGGGTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 90 bp CCCCTAAAAACTAGATTCCTGCCCTTACATCCTAGTTTCCAAGCATaGGTTCCTCTACCCACGATTACACTTACAACCCAAACTGACTGC +
Preference number: 5 (lower is better)
Translates to: PLKTRFLPLHPSFQA*VPLPTITLTTQTDC
Trigger: GCAGTCAGTTTGGGTTGTAAGTGTAATCGTGGGTAGAGGAACCCATGCTTGGAAACTAGGATGTAAGGGCAGGAATCTAGTTTTTAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTGTGCTGTCTGTGCCTaGACAGAAAGGAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGCAVCA*TERSLM
Trigger: CATCAGGCTCCTTTCTGTCAAGGCACAGACAGCACA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGCCATCATACTCCATCTaGGTGAAATCATGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWPSYSI*VKSWFQ
Trigger: CTGGAACCATGATTTCACCAAGATGGAGTATGATGG...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTCTGGCTGTTCTGCCTaGATGACCTCTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSSGCSA*MTSVTN
Trigger: GTTTGTCACAGAGGTCATCAAGGCAGAACAGCCAGA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTATCAAAGTCTCTCTGTaGGGACAGATGCCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSIKVSL*GQMPEP
Trigger: AGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGAT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCAACATTCTCTCCAATCATCACCTTGGTGGCCACATCAATGAAGTCAACCCCTTAGATGGCCATTCTTaGTTCATTGGGAGACGGGGA +
Preference number: 5 (lower is better)
Translates to: INILSNHHLGGHINEVNPLDGHS*FIGRRG
Trigger: TCCCCGTCTCCCAATGAACAAAGAATGGCCATCTAA...GGGGTTGACTTCATTGATGTGGCCACCAAGGTGATGATTGGAGAGAATGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACGTCTTCTTGCCAAGTaGACGCAGTGTGCGGATACT +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQRLLAK*TQCADT
Trigger: AGTATCCGCACACTGCGTCAACTTGGCAAGAAGACG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACTCACAGTCTCAGGATaGCAATTCACCACCACCGTC +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQLTVSG*QFTTTV
Trigger: GACGGTGGTGGTGAATTGCAATCCTGAGACTGTGAG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGAACTGCCAGGTTGTTaGGAATCTGGCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQELPGC*ESGLQL
Trigger: CAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTTCCGTGGCAAACAGCTaGAAACCTTCATTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVSVANS*KPSLCN
Trigger: ATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGTGGCAGGGACATTGTaGGCGTTGAGCCAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQVAGTL*ALSQSD
Trigger: ATCAGACTGGCTCAACGCCAACAATGTCCCTGCCAC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAGGGATTCTGTCCTTCTaGAGACGGCCATGCCACTGG +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAGILSF*RRPCHW
Trigger: CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCC...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTGCAACTTTTCCTACCTaGATCACCATTAATCAGCAC +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVATFPT*ITINQH
Trigger: GTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTGC...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS TCA 90 bp GTGTGCTGTCTGTGCCTTGACAGAAAGGAGCCTGATGCCAGGTCTTaGAAATTTCCATTTTTGGTGTGCAGTCACATTGGTAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: VCCLCLDRKEPDARS*KFPFLVCSHIGKAK
Trigger: TTTGGCTTTACCAATGTGACTGCACACCAAAAATGGAAATTTTCAAGACCTGGCATCAGGCTCCTTTCTGTCAAGGCACAGACAGCACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS TCA 90 bp AATGTTGCATTCACCCACAATGCCCAAGTGGCGAACAACATTGATTaGAGTACGTCTCAACATCTGAAACTCGGCATTGGAGAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: NVAFTHNAQVANNID*STSQHLKLGIGECL
Trigger: CAGACACTCTCCAATGCCGAGTTTCAGATGTTGAGACGTACTTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 90 bp ACTGAATGTTGCATTCACCCACAATGCCCAAGTGGCGAACAACATTaGTTGAAGTACGTCTCAACATCTGAAACTCGGCATTGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: TECCIHPQCPSGEQH*LKYVSTSETRHWRV
Trigger: CACTCTCCAATGCCGAGTTTCAGATGTTGAGACGTACTTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCAACATTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 90 bp AGGACAACTCTTCAAAGTACAGTTTGTCACACTCATCAAAGTCTGTaGTCACAGTCTCAGGATTGCAATTCACCACCACCGTCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: RTTLQSTVCHTHQSL*SQSQDCNSPPPSSC
Trigger: GCAAGAAGACGGTGGTGGTGAATTGCAATCCTGAGACTGTGAGCACAGACTTTGATGAGTGTGACAAACTGTACTTTGAAGAGTTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATTGCCCTAAACTCTaGGTAGCCAGCCAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKHCPKL*VASQWL
Trigger: CAACCACTGGCTGGCTACCAAGAGTTTAGGGCAATG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTACACTTTGACATCCTaGGTTGAAACCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWYTLTS*VETSAI
Trigger: GATTGCTGAGGTTTCAACCAAGGATGTCAAAGTGTA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGAGCAGGCGGATTACATaGTTTTTAATCCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWSRRIT*FLIPQS
Trigger: AGACTGTGGGATTAAAAACAATGTAATCCGCCTGCT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGACAGCGAAGAAGGGTTaGCTCTCATGCATAATCCCC +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGTAKKG*LSCIIP
Trigger: GGGGATTATGCATGAGAGCAAACCCTTCTTCGCTGT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCAGACAGTGACACAATaGTCATCAGCATCTCGAACC +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSQTVTQ*SSASRT
Trigger: GGTTCGAGATGCTGATGACAATTGTGTCACTGTCTG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGGTAGCCAGTGGCTTTaGAGGCCAGAGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVGSQWL*RPEQSF
Trigger: GAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTACC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGGTAGCCAGTGGCTTTaGAGGCCAGAGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQGSQWL*RPEQSF
Trigger: GAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTACC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGGTAGCCAGTGGCTTTaGAGGCCAGAGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMGSQWL*RPEQSF
Trigger: GAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTACC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGGTAGCCAGTGGCTTTaGAGGCCAGAGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNGSQWL*RPEQSF
Trigger: GAAGCTCTGCTCTGGCCTCAAAAGCCACTGGCTACC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAGATACGCGTGCTGCTaGGTTCAGACAACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSRYACC*VQTTLF
Trigger: GAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATCT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCATCTCTAATCAATTTTCTGATGGAAGAGAGGCTGGGATTCTGTCCTTCTTGAGATACGCGTGCTGCTaGGTTCAGACAACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: AISNQFSDGREAGILSFLRYACC*VQTTLF
Trigger: GAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATCT...CAAGAAGGACAGAATCCCAGCCTCTCTTCCATCAGAAAATTGATTAGAGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACTCACAGTCTCAGGATaGCAATTCACCACCACCGTC +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKLTVSG*QFTTTV
Trigger: GACGGTGGTGGTGAATTGCAATCCTGAGACTGTGAG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGCATGAGAGATAACCCTTCCATCTTTGCCAACAGCGTCCATTTCTACTTCTCGCTTGTGCCCATGATCTaGACACCATTCTTGTATAGA +
Preference number: 5 (lower is better)
Translates to: GMRDNPSIFANSVHFYFSLVPMI*TPFLYR
Trigger: TCTATACAAGAATGGTGTCAAGATCATGGGCACAAG...CGAGAAGTAGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTATCTCTCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACCCCTTCAACAAATTTaGTCAGCACCACTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQPLQQI*SAPLGA
Trigger: AGCACCCAGTGGTGCTGACAAAATTTGTTGAAGGGG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACTTTTCAATGGCCCCTaGGCTGATGGTTTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLFNGP*ADGLCG
Trigger: CCCACACAAACCATCAGCCAAGGGGCCATTGAAAAG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGTCCTTTGACAAGAAATaGGACGTTGAATGGACCAGA +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWSFDKK*DVEWTR
Trigger: TCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGA...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGGGATTCTGTCCTTCTaGAGACGGCCATGCCACTGG +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVGILSF*RRPCHW
Trigger: CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGGGATTCTGTCCTTCTaGAGACGGCCATGCCACTGG +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNGILSF*RRPCHW
Trigger: CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACTCTTGGAGTCCACCTaGCGAGATTTCTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKLLEST*RDFCTA
Trigger: AGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGAG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTGAGAATCGCTTGAACTaGGGAGACGGAAATTGCAGT +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSENRLN*GDGNCS
Trigger: ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTC...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAAT +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSKQENR*NLGDGN
Trigger: ATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGAAGGAATGGTGTCCTaGCCCTTACAGTGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQEGMVS*PLQWVE
Trigger: TTCCACCCACTGTAAGGGCAAGGACACCATTCCTTC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAGAAGGAATGGTGTCCTaGCCCTTACAGTGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKEGMVS*PLQWVE
Trigger: TTCCACCCACTGTAAGGGCAAGGACACCATTCCTTC...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATCTGACTGGTGGGGCTaGGGTCACGTGCCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKISDWWG*GHVPVS
Trigger: AGACACAGGCACGTGACCCAAGCCCCACCAGTCAGA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS TCA 90 bp GGTATCTTAAATCCTGTGGAAAGCATTGCCTTTAGGAAGGCTGTATaGATACCTTCACCAAAGCAAGCCACCATGGAATACTATGCAGCC +
Preference number: 5 (lower is better)
Translates to: GILNPVESIAFRKAV*IPSPKQATMEYYAA
Trigger: GGCTGCATAGTATTCCATGGTGGCTTGCTTTGGTGAAGGTATTCATACAGCCTTCCTAAAGGCAATGCTTTCCACAGGATTTAAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671984.1
CDS TCA 90 bp GGTCTTTCTCCAACTTTGAGTGCTCAGCAAACTGACCATGAGTTCTaGATCCTCAAGTATAGGCATCCAGGTCAATTAGAGAAAAGAGGG +
Preference number: 5 (lower is better)
Translates to: GLSPTLSAQQTDHEF*ILKYRHPGQLEKRG
Trigger: CCCTCTTTTCTCTAATTGACCTGGATGCCTATACTTGAGGATTCAGAACTCATGGTCAGTTTGCTGAGCACTCAAAGTTGGAGAAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTAGTGTCCTCACCACTTaGAAAGCTGTCAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSSVLTT*KAVKIL
Trigger: GAGGATTTTGACAGCTTTCAAAGTGGTGAGGACACT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATGTGCTGTCTGTGCCTaGACAGAAAGGAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEACAVCA*TERSLM
Trigger: CATCAGGCTCCTTTCTGTCAAGGCACAGACAGCACA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACCTTTGCCGTACACTTaGACATCCTTGGTTGAAACC +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQPLPYT*TSLVET
Trigger: GGTTTCAACCAAGGATGTCAAAGTGTACGGCAAAGG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCCTTTGCCGTACACTTaGACATCCTTGGTTGAAACC +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGPLPYT*TSLVET
Trigger: GGTTTCAACCAAGGATGTCAAAGTGTACGGCAAAGG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATCTGGCTGTTCTGCCTaGATGACCTCTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKSGCSA*MTSVTN
Trigger: GTTTGTCACAGAGGTCATCAAGGCAGAACAGCCAGA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATTGAGCACACCTCTCTaGAATAGTTCCACTCCACAG +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQLSTPL*NSSTPQ
Trigger: CTGTGGAGTGGAACTATTCAAGAGAGGTGTGCTCAA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCATTTCCTTTGACAAGAAATTGGACGTTGAATGGACCAGAGATGGCAAAAGCCTTGAGCACACCTCTCTaGAATAGTTCCACTCCACAG +
Preference number: 5 (lower is better)
Translates to: SFPLTRNWTLNGPEMAKALSTPL*NSSTPQ
Trigger: CTGTGGAGTGGAACTATTCAAGAGAGGTGTGCTCAA...GGCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAATCAAAGTCTCTCTGTaGGGACAGATGCCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKIKVSL*GQMPEP
Trigger: AGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGAT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGGGATTCCACTATCAACAGCTGTCCTCCGAATCACATAATTATCATGGACAACAGACAGTGACACAATaGTCATCAGCATCTCGAACC +
Preference number: 5 (lower is better)
Translates to: EGFHYQQLSSESHNYHGQQTVTQ*SSASRT
Trigger: GGTTCGAGATGCTGATGACAATTGTGTCACTGTCTG...TTGTCCATGATAATTATGTGATTCGGAGGACAGCTGTTGATAGTGGAATCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp ATCAACATTCTCTCCAATCATCACCTTGGTGGCCACATCAATGAAGTCAACCCCAAGTGGCGAACAACATaGATTGAAGTACGTCTCAAC +
Preference number: 5 (lower is better)
Translates to: INILSNHHLGGHINEVNPKWRTT*IEVRLN
Trigger: GTTGAGACGTACTTCAATCAATGTTGTTCGCCACTT...GGGGTTGACTTCATTGATGTGGCCACCAAGGTGATGATTGGAGAGAATGTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTTAGATGGCCATTCTTaGTTCATTGGGAGACGGGGA +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGLDGHS*FIGRRG
Trigger: TCCCCGTCTCCCAATGAACAAAGAATGGCCATCTAA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAGTCATGGACTCACTGTaGAGGCCTTTCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQVMDSL*RPFSVF
Trigger: AAAGACACTGAAAGGCCTCAACAGTGAGTCCATGAC...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCACGTCTTCTTGCCAAGTaGACGCAGTGTGCGGATACT +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEARLLAK*TQCADT
Trigger: AGTATCCGCACACTGCGTCAACTTGGCAAGAAGACG...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCGTCTTCTTGCCAAGTaGACGCAGTGTGCGGATACT +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLRLLAK*TQCADT
Trigger: AGTATCCGCACACTGCGTCAACTTGGCAAGAAGACG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGAACTGCCAGGTTGTTaGGAATCTGGCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDELPGC*ESGLQL
Trigger: CAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAGAGGAACTGCCAGGTaGTTTGGAATCTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLRGTAR*FGIWPP
Trigger: TGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATAGAGGAACTGCCAGGTaGTTTGGAATCTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDRGTAR*FGIWPP
Trigger: TGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACCCCTTCAACAAATTTaGTCAGCACCACTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQPLQQI*SAPLGA
Trigger: AGCACCCAGTGGTGCTGACAAAATTTGTTGAAGGGG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACCCCTTCAACAAATTTaGTCAGCACCACTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKPLQQI*SAPLGA
Trigger: AGCACCCAGTGGTGCTGACAAAATTTGTTGAAGGGG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTACAAGAAATTGGACGTaGAATGGACCAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSTRNWT*NGPEMA
Trigger: TGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATCTCCAATCATCACCTaGGTGGCCACATCAATGAAG +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQSPIIT*VATSMK
Trigger: CTTCATTGATGTGGCCACCAAGGTGATGATTGGAGA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTATCCTGTGGAAAGCATaGCCTTTAGGAAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSILWKA*PLGRLY
Trigger: ATACAGCCTTCCTAAAGGCAATGCTTTCCACAGGAT...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCCACACCAAGGAATCTaGGCCGGAATGATTGCTGGA +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLPHQGI*AGMIAG
Trigger: TCCAGCAATCATTCCGGCCAAGATTCCTTGGTGTGG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAAGGAATGGTGTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGAGCTTGAAACCTTCATaGTGTAATTGTTCAGCCACA +
Preference number: 5 (lower is better)
Translates to: RRNGVLALTVGGINSAVWSLKPS*CNCSAT
Trigger: TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCT...CCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGACACCATTCCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGTCCGTGGCAAACAGCTaGAAACCTTCATTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: SVANSLKPSLCNCSATPRSVANS*KPSLCN
Trigger: ATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGGGACATTGTTGGCGTaGAGCCAGTCTGATGTGGCT +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQGTLLA*SQSDVA
Trigger: AGCCACATCAGACTGGCTCAACGCCAACAATGTCCC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGGGACATTGTTGGCGTaGAGCCAGTCTGATGTGGCT +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTGTLLA*SQSDVA
Trigger: AGCCACATCAGACTGGCTCAACGCCAACAATGTCCC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGGGACATTGTTGGCGTaGAGCCAGTCTGATGTGGCT +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMGTLLA*SQSDVA
Trigger: AGCCACATCAGACTGGCTCAACGCCAACAATGTCCC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGTGGCAGGGACATTGTaGGCGTTGAGCCAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVVAGTL*ALSQSD
Trigger: ATCAGACTGGCTCAACGCCAACAATGTCCCTGCCAC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGGTGGCAGGGACATTGTaGGCGTTGAGCCAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMVAGTL*ALSQSD
Trigger: ATCAGACTGGCTCAACGCCAACAATGTCCCTGCCAC...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGGGATTCTGTCCTTCTaGAGACGGCCATGCCACTGG +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLGILSF*RRPCHW
Trigger: CCAGTGGCATGGCCGTCTCAAGAAGGACAGAATCCC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTAATTTAGTGTTGTTGTaGGGAAGGTTAATCACTAGG +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVNLVLL*GRLITR
Trigger: CCTAGTGATTAACCTTCCCAACAACAACACTAAATT...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GTCCTTGCCCTTACAGTGGGTGGAATTAATAGTGCAGTGTGGGACCCCATAGTTTGGACAAATTTAGTGTaGTTGTTGGGAAGGTTAATC +
Preference number: 5 (lower is better)
Translates to: VLALTVGGINSAVWDPIVWTNLV*LLGRLI
Trigger: GATTAACCTTCCCAACAACAACACTAAATTTGTCCA...AACTATGGGGTCCCACACTGCACTATTAATTCCACCCACTGTAAGGGCAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCTCTTGGAGTCCACCTaGCGAGATTTCTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDLLEST*RDFCTA
Trigger: AGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGAG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACGTCATTTTGATGATTaGTGGCATGGGCCTCGGCTA +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKRHFDD*WHGPRL
Trigger: TAGCCGAGGCCCATGCCACAAATCATCAAAATGACG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CAA 90 bp TCATTTCCTTTGACAAGAAATTGGACGTTGAATGGACCAGAGATGGCAAAAGCCGGTCTTTCTCCAACTTaGAGTGCTCAGCAAACTGAC +
Preference number: 5 (lower is better)
Translates to: SFPLTRNWTLNGPEMAKAGLSPT*SAQQTD
Trigger: GTCAGTTTGCTGAGCACTCAAAGTTGGAGAAAGACC...GGCTTTTGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS TCA 90 bp AGGTTTTGGCACCAGCAGCCAATCCTGTTATTAAGTTTCCTGTACTaGTTCCAAACAATGGCTCCTTGCGATCACTCTCCAAAATCTTTC +
Preference number: 5 (lower is better)
Translates to: RFWHQQPILLLSFLY*FQTMAPCDHSPKSF
Trigger: GAAAGATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTGGAATCAGTACAGGAAACTTAATAACAGGATTGGCTGCTGGTGCCAAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATGGTGTGCAGTCACATaGGTAAAGCCAAAACCAGTC +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKWCAVT*VKPKPV
Trigger: GACTGGTTTTGGCTTTACCAATGTGACTGCACACCA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTGTGCTGTCTGTGCCTaGACAGAAAGGAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNCAVCA*TERSLM
Trigger: CATCAGGCTCCTTTCTGTCAAGGCACAGACAGCACA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCATTGCCCTAAACTCTaGGTAGCCAGCCAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVHCPKL*VASQWL
Trigger: CAACCACTGGCTGGCTACCAAGAGTTTAGGGCAATG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACATTGCCCTAAACTCTaGGTAGCCAGCCAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTHCPKL*VASQWL
Trigger: CAACCACTGGCTGGCTACCAAGAGTTTAGGGCAATG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAATTTGTGGGGTTTCCTTaGCCGTACACTTTGACATCC +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQFVGFP*PYTLTS
Trigger: GGATGTCAAAGTGTACGGCAAAGGAAACCCCACAAA...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACCAAACAATGGCTCCTaGCGATCACTCTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQPNNGS*RSLSKI
Trigger: GATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTGG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAACCTAGAATAAGGACTTaGGAAACCTCAACCCGAGAT +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQPRIRT*ETSTRD
Trigger: ATCTCGGGTTGAGGTTTCCAAAGTCCTTATTCTAGG...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATCCACCAGAATTTGGTaGGTCATAGCAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQSTRIW*VIAKAF
Trigger: AAAGGCCTTTGCTATGACCAACCAAATTCTGGTGGA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACTTCTCCACCAGAATTaGGTTGGTCATAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLLHQN*VGHSKG
Trigger: GCCTTTGCTATGACCAACCAAATTCTGGTGGAGAAG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACAGACAGTGACACAATaGTCATCAGCATCTCGAACC +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKQTVTQ*SSASRT
Trigger: GGTTCGAGATGCTGATGACAATTGTGTCACTGTCTG...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATTAGATGGCCATTCTTaGTTCATTGGGAGACGGGGA +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKLDGHS*FIGRRG
Trigger: TCCCCGTCTCCCAATGAACAAAGAATGGCCATCTAA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGTCATGGACTCACTGTaGAGGCCTTTCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQVMDSL*RPFSVF
Trigger: AAAGACACTGAAAGGCCTCAACAGTGAGTCCATGAC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCGTCTTCTTGCCAAGTaGACGCAGTGTGCGGATACT +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNRLLAK*TQCADT
Trigger: AGTATCCGCACACTGCGTCAACTTGGCAAGAAGACG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTCACAGTCTCAGGATaGCAATTCACCACCACCGTC +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLTVSG*QFTTTV
Trigger: GACGGTGGTGGTGAATTGCAATCCTGAGACTGTGAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCTCACAGTCTCAGGATaGCAATTCACCACCACCGTC +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVLTVSG*QFTTTV
Trigger: GACGGTGGTGGTGAATTGCAATCCTGAGACTGTGAG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAGAGGAACTGCCAGGTaGTTTGGAATCTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTRGTAR*FGIWPP
Trigger: TGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAGGAACTGCCAGGTaGTTTGGAATCTGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVRGTAR*FGIWPP
Trigger: TGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTCTTGTGCCCATGATCTaGACACCATTCTTGTATAGA +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSLVPMI*TPFLYR
Trigger: TCTATACAAGAATGGTGTCAAGATCATGGGCACAAG...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCACCCCTTCAACAAATTTaGTCAGCACCACTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAPLQQI*SAPLGA
Trigger: AGCACCCAGTGGTGCTGACAAAATTTGTTGAAGGGG...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTTTTCAATGGCCCCTaGGCTGATGGTTTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLFNGP*ADGLCG
Trigger: CCCACACAAACCATCAGCCAAGGGGCCATTGAAAAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATCTCCAATCATCACCTaGGTGGCCACATCAATGAAG +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKSPIIT*VATSMK
Trigger: CTTCATTGATGTGGCCACCAAGGTGATGATTGGAGA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGGAGACGGAAATTGCAGTTGGGATGGTCCAATGTaGGAAGATGTTTCTCATCAA +
Preference number: 5 (lower is better)
Translates to: IHSLKQENRLNLGDGNCSWDGPM*EDVSHQ
Trigger: TTGATGAGAAACATCTTCCAACATTGGACCATCCCA...ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAATCCTGTGGAAAGCATaGCCTTTAGGAAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQILWKA*PLGRLY
Trigger: ATACAGCCTTCCTAAAGGCAATGCTTTCCACAGGAT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCCACACCAAGGAATCTaGGCCGGAATGATTGCTGGA +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVPHQGI*AGMIAG
Trigger: TCCAGCAATCATTCCGGCCAAGATTCCTTGGTGTGG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCCACACCAAGGAATCTaGGCCGGAATGATTGCTGGA +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNPHQGI*AGMIAG
Trigger: TCCAGCAATCATTCCGGCCAAGATTCCTTGGTGTGG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGGGACATTGTTGGCGTaGAGCCAGTCTGATGTGGCT +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIGTLLA*SQSDVA
Trigger: AGCCACATCAGACTGGCTCAACGCCAACAATGTCCC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGTGGCAGGGACATTGTaGGCGTTGAGCCAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLVAGTL*ALSQSD
Trigger: ATCAGACTGGCTCAACGCCAACAATGTCCCTGCCAC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACTCTTGGAGTCCACCTaGCGAGATTTCTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTLLEST*RDFCTA
Trigger: AGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGAG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACTCTTGGAGTCCACCTaGCGAGATTTCTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQLLEST*RDFCTA
Trigger: AGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGAG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGCTCTTGGAGTCCACCTaGCGAGATTTCTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMLLEST*RDFCTA
Trigger: AGCTGTGCAGAAATCTCGCAAGGTGGACTCCAAGAG...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAGAGAATCGCTTGAACTaGGGAGACGGAAATTGCAGT +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQENRLN*GDGNCS
Trigger: ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTC...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAAT +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKKQENR*NLGDGN
Trigger: ATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGAAGGAATGGTGTCCTaGCCCTTACAGTGGGTGGAA +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQEGMVS*PLQWVE
Trigger: TTCCACCCACTGTAAGGGCAAGGACACCATTCCTTC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCGTCATTTTGATGATTaGTGGCATGGGCCTCGGCTA +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDRHFDD*WHGPRL
Trigger: TAGCCGAGGCCCATGCCACAAATCATCAAAATGACG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAATCCTCTAAGCATTCCTaGTGGTTCTTTTCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQSSKHS*WFFSEA
Trigger: GGCTTCAGAAAAGAACCACAAGGAATGCTTAGAGGA...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS TCA 90 bp AGCATCTCGAACCACTTCATATTCTATTTCTTTCCAACCTGTCACTaGCTTCTCCACCAGAATTTGGTTGGTCATAGCAAAGGCCTTTGT +
Preference number: 5 (lower is better)
Translates to: SISNHFIFYFFPTCH*LLHQNLVGHSKGLC
Trigger: ACAAAGGCCTTTGCTATGACCAACCAAATTCTGGTGGAGAAGTCAGTGACAGGTTGGAAAGAAATAGAATATGAAGTGGTTCGAGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 90 bp AGCATCTCGAACCACTTCATATTCTATTTCTTTCCAACCTGTCACTaGCTTCTCCACCAGAATTTGGTTGGTCATAGCAAAGGCCTAGAA +
Preference number: 5 (lower is better)
Translates to: SISNHFIFYFFPTCH*LLHQNLVGHSKGLE
Trigger: TTCTAGGCCTTTGCTATGACCAACCAAATTCTGGTGGAGAAGTCAGTGACAGGTTGGAAAGAAATAGAATATGAAGTGGTTCGAGATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467353.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATGTGCTGTCTGTGCCTaGACAGAAAGGAGCCTGATG +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKICAVCA*TERSLM
Trigger: CATCAGGCTCCTTTCTGTCAAGGCACAGACAGCACA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTTTGTGGGGTTTCCTTaGCCGTACACTTTGACATCC +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDFVGFP*PYTLTS
Trigger: GGATGTCAAAGTGTACGGCAAAGGAAACCCCACAAA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAACAGCGAAGAAGGGTTaGCTCTCATGCATAATCCCC +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTTAKKG*LSCIIP
Trigger: GGGGATTATGCATGAGAGCAAACCCTTCTTCGCTGT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAACAGCGAAGAAGGGTTaGCTCTCATGCATAATCCCC +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQTAKKG*LSCIIP
Trigger: GGGGATTATGCATGAGAGCAAACCCTTCTTCGCTGT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTCTGGCTGTTCTGCCTaGATGACCTCTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSGCSA*MTSVTN
Trigger: GTTTGTCACAGAGGTCATCAAGGCAGAACAGCCAGA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATCTGGCTGTTCTGCCTaGATGACCTCTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTSGCSA*MTSVTN
Trigger: GTTTGTCACAGAGGTCATCAAGGCAGAACAGCCAGA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAGTGGCGAACAACATaGATTGAAGTACGTCTCAAC +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQKWRTT*IEVRLN
Trigger: GTTGAGACGTACTTCAATCAATGTTGTTCGCCACTT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGAAGTGGCGAACAACATaGATTGAAGTACGTCTCAAC +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGKWRTT*IEVRLN
Trigger: GTTGAGACGTACTTCAATCAATGTTGTTCGCCACTT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTTAGATGGCCATTCTTaGTTCATTGGGAGACGGGGA +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLLDGHS*FIGRRG
Trigger: TCCCCGTCTCCCAATGAACAAAGAATGGCCATCTAA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAGATACGCGTGCTGCTaGGTTCAGACAACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLRYACC*VQTTLF
Trigger: GAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATCT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTCATCAAGGGACATGTaGTCATCAATGGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDSSRDM*SSMALA
Trigger: TGCCAAGGCCATTGATGACAACATGTCCCTTGATGA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGTCATGGACTCACTGTaGAGGCCTTTCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDVMDSL*RPFSVF
Trigger: AAAGACACTGAAAGGCCTCAACAGTGAGTCCATGAC...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACGTCTTCTTGCCAAGTaGACGCAGTGTGCGGATACT +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLRLLAK*TQCADT
Trigger: AGTATCCGCACACTGCGTCAACTTGGCAAGAAGACG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACTCACAGTCTCAGGATaGCAATTCACCACCACCGTC +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLLTVSG*QFTTTV
Trigger: GACGGTGGTGGTGAATTGCAATCCTGAGACTGTGAG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGAACTGCCAGGTTGTTaGGAATCTGGCCTCCAACTG +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIELPGC*ESGLQL
Trigger: CAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAATCTTGACACCATTCTaGTATAGAGGAACTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKILTPF*YRGTAR
Trigger: CCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGAT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGCTTGTGCCCATGATCTaGACACCATTCTTGTATAGA +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGLVPMI*TPFLYR
Trigger: TCTATACAAGAATGGTGTCAAGATCATGGGCACAAG...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAATAACCCTTCCATCTTaGCCAACAGCGTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKITLPS*PTASIS
Trigger: AGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTAT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACTTTTCAATGGCCCCTaGGCTGATGGTTTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILFNGP*ADGLCG
Trigger: CCCACACAAACCATCAGCCAAGGGGCCATTGAAAAG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACTTTTCAATGGCCCCTaGGCTGATGGTTTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLLFNGP*ADGLCG
Trigger: CCCACACAAACCATCAGCCAAGGGGCCATTGAAAAG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACAAGAAATTGGACGTaGAATGGACCAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQTRNWT*NGPEMA
Trigger: TGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTGGGATGGTCCAATGTaGGAAGATGTTTCTCATCAA +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGWDGPM*EDVSHQ
Trigger: TTGATGAGAAACATCTTCCAACATTGGACCATCCCA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAATCATCACCTTGGTGGCCATGGGATGGTCCAATGTaGGAAGATGTTTCTCATCAA +
Preference number: 5 (lower is better)
Translates to: MLEDVSHQHSLQSSPWWPWDGPM*EDVSHQ
Trigger: TTGATGAGAAACATCTTCCAACATTGGACCATCCCA...TGGCCACCAAGGTGATGATTGGAGAGAATGTTGATGAGAAACATCTTCCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAATCCTGTGGAAAGCATaGCCTTTAGGAAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKILWKA*PLGRLY
Trigger: ATACAGCCTTCCTAAAGGCAATGCTTTCCACAGGAT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATCCTGTGGAAAGCATaGCCTTTAGGAAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQILWKA*PLGRLY
Trigger: ATACAGCCTTCCTAAAGGCAATGCTTTCCACAGGAT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACCACACCAAGGAATCTaGGCCGGAATGATTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLPHQGI*AGMIAG
Trigger: TCCAGCAATCATTCCGGCCAAGATTCCTTGGTGTGG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCGTGGCAAACAGCTTGAAACCTTCATTGTGTAATTGTTCAGCCACACCAAGGTGGACAAATTTAGTGTaGTTGTTGGGAAGGTTAATC +
Preference number: 5 (lower is better)
Translates to: SVANSLKPSLCNCSATPRWTNLV*LLGRLI
Trigger: GATTAACCTTCCCAACAACAACACTAAATTTGTCCA...CCTTGGTGTGGCTGAACAATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAAT +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLKQENR*NLGDGN
Trigger: ATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAAT +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDKQENR*NLGDGN
Trigger: ATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAATTATGGGATGGTCCAATGTTGGAAGATGTTTCTCATCAACATTCTCTCCAAGAACAAGGTTGTTCTTaGCTTGTAGTGAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: ELWDGPMLEDVSHQHSLQEQGCS*LVVRQR
Trigger: CCTCTGCCTCACTACAAGCAAAGAACAACCTTGTTC...TTGGAGAGAATGTTGATGAGAAACATCTTCCAACATTGGACCATCCCATAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS TCA 90 bp TCAGCAATCAAATTCTGTTTATTTGGATCCACAAAATCCACAGGCTaGCCTTCAAATTCAATCTTCCCAAGCATGGTACCCTTATCCCGA +
Preference number: 5 (lower is better)
Translates to: SAIKFCLFGSTKSTG*PSNSIFPSMVPLSR
Trigger: TCGGGATAAGGGTACCATGCTTGGGAAGATTGAATTTGAAGGTCAGCCTGTGGATTTTGTGGATCCAAATAAACAGAATTTGATTGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS TCA 90 bp ATCATGCTCCTGACCATTGTAGGTAACATAGAGATAGTTTGTTACTaGTGGGTATTCTGCAGCCAGTGTATCAATCTGTTTAACCCAAGG +
Preference number: 5 (lower is better)
Translates to: IMLLTIVGNIEIVCY*WVFCSQCINLFNPR
Trigger: CCTTGGGTTAAACAGATTGATACACTGGCTGCAGAATACCCATCAGTAACAAACTATCTCTATGTTACCTACAATGGTCAGGAGCATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAAGTGTCCTCACCACTTaGAAAGCTGTCAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEASVLTT*KAVKIL
Trigger: GAGGATTTTGACAGCTTTCAAAGTGGTGAGGACACT...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAGCAAACCTGAAACCTaGATTCCATTAGACTCCAAA +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQSKPET*IPLDSK
Trigger: TTTGGAGTCTAATGGAATCAAGGTTTCAGGTTTGCT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAATGTCCACTCCATAAATaGCAGGAACCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQCPLHK*QEPFLP
Trigger: AGGAAGAAAAGGTTCCTGCAATTTATGGAGTGGACA...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAATACACTTTGACATCCTaGGTTGAAACCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKYTLTS*VETSAI
Trigger: GATTGCTGAGGTTTCAACCAAGGATGTCAAAGTGTA...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCCTTTGCCGTACACTTaGACATCCTTGGTTGAAACC +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVPLPYT*TSLVET
Trigger: GGTTTCAACCAAGGATGTCAAAGTGTACGGCAAAGG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTTTGTGGGGTTTCCTTaGCCGTACACTTTGACATCC +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMFVGFP*PYTLTS
Trigger: GGATGTCAAAGTGTACGGCAAAGGAAACCCCACAAA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCCATCATACTCCATCTaGGTGAAATCATGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDPSYSI*VKSWFQ
Trigger: CTGGAACCATGATTTCACCAAGATGGAGTATGATGG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACCAAACAATGGCTCCTaGCGATCACTCTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQPNNGS*RSLSKI
Trigger: GATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTGG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGCCTAGAATAAGGACTTaGGAAACCTCAACCCGAGAT +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLPRIRT*ETSTRD
Trigger: ATCTCGGGTTGAGGTTTCCAAAGTCCTTATTCTAGG...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTTTAAGCCCACCTCATaGGTCTGGACTGATGCAATG +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVFKPTS*VWTDAM
Trigger: CATTGCATCAGTCCAGACCAATGAGGTGGGCTTAAA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTTTAAGCCCACCTCATaGGTCTGGACTGATGCAATG +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMFKPTS*VWTDAM
Trigger: CATTGCATCAGTCCAGACCAATGAGGTGGGCTTAAA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATCTGGCTGTTCTGCCTaGATGACCTCTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFISGCSA*MTSVTN
Trigger: GTTTGTCACAGAGGTCATCAAGGCAGAACAGCCAGA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAGCACACCTCTCTaGAATAGTTCCACTCCACAG +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNLSTPL*NSSTPQ
Trigger: CTGTGGAGTGGAACTATTCAAGAGAGGTGTGCTCAA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATTGAGCACACCTCTCTaGAATAGTTCCACTCCACAG +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTLSTPL*NSSTPQ
Trigger: CTGTGGAGTGGAACTATTCAAGAGAGGTGTGCTCAA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAATCAAAGTCTCTCTGTaGGGACAGATGCCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLIKVSL*GQMPEP
Trigger: AGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGAT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAATCAAAGTCTCTCTGTaGGGACAGATGCCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIIKVSL*GQMPEP
Trigger: AGGCTCAGGCATCTGTCCCAACAGAGAGACTTTGAT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGCTTCTCCACCAGAATTaGGTTGGTCATAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVLLHQN*VGHSKG
Trigger: GCCTTTGCTATGACCAACCAAATTCTGGTGGAGAAG...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAACTTCTCCACCAGAATTaGGTTGGTCATAGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQLLHQN*VGHSKG
Trigger: GCCTTTGCTATGACCAACCAAATTCTGGTGGAGAAG...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACCAGACAGTGACACAATaGTCATCAGCATCTCGAACC +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNQTVTQ*SSASRT
Trigger: GGTTCGAGATGCTGATGACAATTGTGTCACTGTCTG...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACAGACAGTGACACAATaGTCATCAGCATCTCGAACC +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTQTVTQ*SSASRT
Trigger: GGTTCGAGATGCTGATGACAATTGTGTCACTGTCTG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAGTGGCGAACAACATaGATTGAAGTACGTCTCAAC +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQKWRTT*IEVRLN
Trigger: GTTGAGACGTACTTCAATCAATGTTGTTCGCCACTT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATTAGATGGCCATTCTTaGTTCATTGGGAGACGGGGA +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQLDGHS*FIGRRG
Trigger: TCCCCGTCTCCCAATGAACAAAGAATGGCCATCTAA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAAGATACGCGTGCTGCTaGGTTCAGACAACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQRYACC*VQTTLF
Trigger: GAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATCT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTCATCAAGGGACATGTaGTCATCAATGGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSSRDM*SSMALA
Trigger: TGCCAAGGCCATTGATGACAACATGTCCCTTGATGA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTCATCAAGGGACATGTaGTCATCAATGGCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNSSRDM*SSMALA
Trigger: TGCCAAGGCCATTGATGACAACATGTCCCTTGATGA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGTCATGGACTCACTGTaGAGGCCTTTCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVVMDSL*RPFSVF
Trigger: AAAGACACTGAAAGGCCTCAACAGTGAGTCCATGAC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATATCTTGACACCATTCTaGTATAGAGGAACTGCCAGG +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDILTPF*YRGTAR
Trigger: CCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGAT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAACTTGTGCCCATGATCTaGACACCATTCTTGTATAGA +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQLVPMI*TPFLYR
Trigger: TCTATACAAGAATGGTGTCAAGATCATGGGCACAAG...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATATAACCCTTCCATCTTaGCCAACAGCGTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDITLPS*PTASIS
Trigger: AGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTAT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCTCCAATCATCACCTaGGTGGCCACATCAATGAAG +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSPIIT*VATSMK
Trigger: CTTCATTGATGTGGCCACCAAGGTGATGATTGGAGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAATGGGATGGTCCAATGTaGGAAGATGTTTCTCATCAA +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQWDGPM*EDVSHQ
Trigger: TTGATGAGAAACATCTTCCAACATTGGACCATCCCA...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATATCCTGTGGAAAGCATaGCCTTTAGGAAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDILWKA*PLGRLY
Trigger: ATACAGCCTTCCTAAAGGCAATGCTTTCCACAGGAT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGAGCTTGAAACCTTCATaGTGTAATTGTTCAGCCACA +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGSLKPS*CNCSAT
Trigger: TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCT...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAATCCGTGGCAAACAGCTaGAAACCTTCATTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQSVANS*KPSLCN
Trigger: ATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAGAGAATCGCTTGAACTaGGGAGACGGAAATTGCAGT +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTENRLN*GDGNCS
Trigger: ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTC...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAAT +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNKQENR*NLGDGN
Trigger: ATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAAGCAGGAGAATCGCTaGAACTTGGGAGACGGAAAT +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVKQENR*NLGDGN
Trigger: ATTTCCGTCTCCCAAGTTCAAGCGATTCTCCTGCTT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS TCA 90 bp CTGTGTGAACACCCATGGCATCAACATTTTCCATGTTACAGACAGTaGCACAATTGTCATCAGCATCTCGAACCACTTCATATTCTATTT +
Preference number: 5 (lower is better)
Translates to: LCEHPWHQHFPCYRQ*HNCHQHLEPLHILF
Trigger: AAATAGAATATGAAGTGGTTCGAGATGCTGATGACAATTGTGTCACTGTCTGTAACATGGAAAATGTTGATGCCATGGGTGTTCACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000467353.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 90 bp AGTGTTTGCAAGATAGTGGTCAGAATGAAAGAAAACAACACTAGGTaGCCTACCCAAAGATCAAACCCTGACCTTGACTTCATTAACATG +
Preference number: 5 (lower is better)
Translates to: SVCKIVVRMKENNTR*PTQRSNPDLDFINM
Trigger: CATGTTAATGAAGTCAAGGTCAGGGTTTGATCTTTGGGTAGGTCACCTAGTGTTGTTTTCTTTCATTCTGACCACTATCTTGCAAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAGTGTCCTCACCACTTaGAAAGCTGTCAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNSVLTT*KAVKIL
Trigger: GAGGATTTTGACAGCTTTCAAAGTGGTGAGGACACT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATTACACTTTGACATCCTaGGTTGAAACCTCAGCAATC +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDYTLTS*VETSAI
Trigger: GATTGCTGAGGTTTCAACCAAGGATGTCAAAGTGTA...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATACCTTTGCCGTACACTTaGACATCCTTGGTTGAAACC +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIPLPYT*TSLVET
Trigger: GGTTTCAACCAAGGATGTCAAAGTGTACGGCAAAGG...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATACCAAACAATGGCTCCTaGCGATCACTCTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIPNNGS*RSLSKI
Trigger: GATTTTGGAGAGTGATCGCAAGGAGCCATTGTTTGG...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAGGACTGATGCAATGTTaGGGTTCATCAGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAGLMQC*GSSEQF
Trigger: AAACTGTTCTGATGAACCCAAACATTGCATCAGTCC...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATTTAAGCCCACCTCATaGGTCTGGACTGATGCAATG +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIFKPTS*VWTDAM
Trigger: CATTGCATCAGTCCAGACCAATGAGGTGGGCTTAAA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATCCACCAGAATTTGGTaGGTCATAGCAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQSTRIW*VIAKAF
Trigger: AAAGGCCTTTGCTATGACCAACCAAATTCTGGTGGA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACAGACAGTGACACAATaGTCATCAGCATCTCGAACC +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIQTVTQ*SSASRT
Trigger: GGTTCGAGATGCTGATGACAATTGTGTCACTGTCTG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAAGTGGCGAACAACATaGATTGAAGTACGTCTCAAC +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLKWRTT*IEVRLN
Trigger: GTTGAGACGTACTTCAATCAATGTTGTTCGCCACTT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATTAGATGGCCATTCTTaGTTCATTGGGAGACGGGGA +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKILDGHS*FIGRRG
Trigger: TCCCCGTCTCCCAATGAACAAAGAATGGCCATCTAA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAGATACGCGTGCTGCTaGGTTCAGACAACTCTTTTC +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIRYACC*VQTTLF
Trigger: GAAAAGAGTTGTCTGAACCAAGCAGCACGCGTATCT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAGTCATGGACTCACTGTaGAGGCCTTTCAGTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIVMDSL*RPFSVF
Trigger: AAAGACACTGAAAGGCCTCAACAGTGAGTCCATGAC...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTCTTCAAAGTACAGTTaGTCACACTCATCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGSSKYS*SHSSKS
Trigger: AGACTTTGATGAGTGTGACAAACTGTACTTTGAAGA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGATCTTGACACCATTCTaGTATAGAGGAACTGCCAGG +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVILTPF*YRGTAR
Trigger: CCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGAT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACATCTTGACACCATTCTaGTATAGAGGAACTGCCAGG +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNILTPF*YRGTAR
Trigger: CCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGAT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGATAACCCTTCCATCTTaGCCAACAGCGTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMITLPS*PTASIS
Trigger: AGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTAT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAATAACCCTTCCATCTTaGCCAACAGCGTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTITLPS*PTASIS
Trigger: AGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTAT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAACAAGAAATTGGACGTaGAATGGACCAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTTRNWT*NGPEMA
Trigger: TGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGACAAGAAATTGGACGTaGAATGGACCAGAGATGGCA +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMTRNWT*NGPEMA
Trigger: TGCCATCTCTGGTCCATTCAACGTCCAATTTCTTGT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATCCTTTGACAAGAAATaGGACGTTGAATGGACCAGA +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEASFDKK*DVEWTR
Trigger: TCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAGACATCATTTCCTTaGACAAGAAATTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: GRDNNIPGLAKWVRMRIQKTSFP*TRNWTL
Trigger: CAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTT...TTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATCTCCAATCATCACCTaGGTGGCCACATCAATGAAG +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLSPIIT*VATSMK
Trigger: CTTCATTGATGTGGCCACCAAGGTGATGATTGGAGA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACATCCTGTGGAAAGCATaGCCTTTAGGAAGGCTGTAT +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNILWKA*PLGRLY
Trigger: ATACAGCCTTCCTAAAGGCAATGCTTTCCACAGGAT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTCCGTGGCAAACAGCTaGAAACCTTCATTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLSVANS*KPSLCN
Trigger: ATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ATCCATCGTCTTAAGGGAATGAACCTTACTTCCAAGTTATTCCAAAACTGGGGGTGGACAAATTTAGTGTaGTTGTTGGGAAGGTTAATC +
Preference number: 5 (lower is better)
Translates to: IHRLKGMNLTSKLFQNWGWTNLV*LLGRLI
Trigger: GATTAACCTTCCCAACAACAACACTAAATTTGTCCA...CCCCCAGTTTTGGAATAACTTGGAAGTAAGGTTCATTCCCTTAAGACGATGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAGAGAATCGCTTGAACTaGGGAGACGGAAATTGCAGT +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLENRLN*GDGNCS
Trigger: ACTGCAATTTCCGTCTCCCAAGTTCAAGCGATTCTC...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGGCTGTAAGAACAAGGTaGTTCTTTGCTTGTAGTGAG +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLAVRTR*FFACSE
Trigger: CTCACTACAAGCAAAGAACAACCTTGTTCTTACAGC...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673698.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAAAGTTTCAATTGGGTTaGTCTGACTGGTGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIKFQLG*SDWWGL
Trigger: CAAGCCCCACCAGTCAGACAAACCCAATTGAAACTT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAGTGTCCTCACCACTTaGAAAGCTGTCAAAATCCTC +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFISVLTT*KAVKIL
Trigger: GAGGATTTTGACAGCTTTCAAAGTGGTGAGGACACT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATTAGACTCCAAATATTaGCTAAGTCCCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEALDSKY*LSPSSS
Trigger: GGATGAACTGGGACTTAGCAAATATTTGGAGTCTAA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATAGCAAACCTGAAACCTaGATTCCATTAGACTCCAAA +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDSKPET*IPLDSK
Trigger: TTTGGAGTCTAATGGAATCAAGGTTTCAGGTTTGCT...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATGTCCACTCCATAAATaGCAGGAACCTTTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTCPLHK*QEPFLP
Trigger: AGGAAGAAAAGGTTCCTGCAATTTATGGAGTGGACA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAGCAGGCGGATTACATaGTTTTTAATCCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTSRRIT*FLIPQS
Trigger: AGACTGTGGGATTAAAAACAATGTAATCCGCCTGCT...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATACCATCATACTCCATCTaGGTGAAATCATGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIPSYSI*VKSWFQ
Trigger: CTGGAACCATGATTTCACCAAGATGGAGTATGATGG...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACCATCATACTCCATCTaGGTGAAATCATGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLPSYSI*VKSWFQ
Trigger: CTGGAACCATGATTTCACCAAGATGGAGTATGATGG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAAATCCCCTCATTTGTTaGATCGTTGACATTCACAAA +
Preference number: 5 (lower is better)
Translates to: PGLAKWVRMRIQKEAIHKNPLIC*IVDIHK
Trigger: TTTGTGAATGTCAACGATCAAACAAATGAGGGGATT...TTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATACCTAGAATAAGGACTTaGGAAACCTCAACCCGAGAT +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIPRIRT*ETSTRD
Trigger: ATCTCGGGTTGAGGTTTCCAAAGTCCTTATTCTAGG...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTACCTAGAATAAGGACTTaGGAAACCTCAACCCGAGAT +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLPRIRT*ETSTRD
Trigger: ATCTCGGGTTGAGGTTTCCAAAGTCCTTATTCTAGG...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACGGACTGATGCAATGTTaGGGTTCATCAGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNGLMQC*GSSEQF
Trigger: AAACTGTTCTGATGAACCCAAACATTGCATCAGTCC...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGGACTGATGCAATGTTaGGGTTCATCAGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQGLMQC*GSSEQF
Trigger: AAACTGTTCTGATGAACCCAAACATTGCATCAGTCC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATCCACCAGAATTTGGTaGGTCATAGCAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFISTRIW*VIAKAF
Trigger: AAAGGCCTTTGCTATGACCAACCAAATTCTGGTGGA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATCCACCAGAATTTGGTaGGTCATAGCAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLSTRIW*VIAKAF
Trigger: AAAGGCCTTTGCTATGACCAACCAAATTCTGGTGGA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATCCACCAGAATTTGGTaGGTCATAGCAAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKISTRIW*VIAKAF
Trigger: AAAGGCCTTTGCTATGACCAACCAAATTCTGGTGGA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACACTTGTGCCCATGATCTaGACACCATTCTTGTATAGA +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTLVPMI*TPFLYR
Trigger: TCTATACAAGAATGGTGTCAAGATCATGGGCACAAG...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAATAACCCTTCCATCTTaGCCAACAGCGTCCATTTCT +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIITLPS*PTASIS
Trigger: AGAAATGGACGCTGTTGGCAAAGATGGAAGGGTTAT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATCCTTTGACAAGAAATaGGACGTTGAATGGACCAGA +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQSFDKK*DVEWTR
Trigger: TCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTCCTTTGACAAGAAATaGGACGTTGAATGGACCAGA +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNSFDKK*DVEWTR
Trigger: TCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGA...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTCCTTTGACAAGAAATaGGACGTTGAATGGACCAGA +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSFDKK*DVEWTR
Trigger: TCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp ACAACACATCTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACATCCTTTGACAAGAAATaGGACGTTGAATGGACCAGA +
Preference number: 5 (lower is better)
Translates to: TTHLHKHCLPSADIVQKTSFDKK*DVEWTR
Trigger: TCTGGTCCATTCAACGTCCAATTTCTTGTCAAAGGA...TGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAGATGTGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAGCTTGAAACCTTCATaGTGTAATTGTTCAGCCACA +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLSLKPS*CNCSAT
Trigger: TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATCCGTGGCAAACAGCTaGAAACCTTCATTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQSVANS*KPSLCN
Trigger: ATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCCGTGGCAAACAGCTaGAAACCTTCATTGTGTAAT +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSVANS*KPSLCN
Trigger: ATTACACAATGAAGGTTTCAAGCTGTTTGCCACGGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAAATTTAGTGTTGTTGTaGGGAAGGTTAATCACTAGG +
Preference number: 5 (lower is better)
Translates to: SWISQMGENEDPKRSNTQNLVLL*GRLITR
Trigger: CCTAGTGATTAACCTTCCCAACAACAACACTAAATT...TTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGGCAACTTTTCCTACCTaGATCACCATTAATCAGCAC +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVATFPT*ITINQH
Trigger: GTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTGC...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAGAACTAAAGTTTCAATaGGGTTTGTCTGACTGGTGG +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQELKFQ*GLSDWW
Trigger: CCACCAGTCAGACAAACCCAATTGAAACTTTAGTTC...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGCAAACCTGAAACCTaGATTCCATTAGACTCCAAA +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVSKPET*IPLDSK
Trigger: TTTGGAGTCTAATGGAATCAAGGTTTCAGGTTTGCT...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAGCAAACCTGAAACCTaGATTCCATTAGACTCCAAA +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNSKPET*IPLDSK
Trigger: TTTGGAGTCTAATGGAATCAAGGTTTCAGGTTTGCT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAAGCAGGCGGATTACATaGTTTTTAATCCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKISRRIT*FLIPQS
Trigger: AGACTGTGGGATTAAAAACAATGTAATCCGCCTGCT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAGCAGGCGGATTACATaGTTTTTAATCCCACAGTCT +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFISRRIT*FLIPQS
Trigger: AGACTGTGGGATTAAAAACAATGTAATCCGCCTGCT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGGACTGATGCAATGTTaGGGTTCATCAGAACAGTTT +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIGLMQC*GSSEQF
Trigger: AAACTGTTCTGATGAACCCAAACATTGCATCAGTCC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAAGTGGCGAACAACATaGATTGAAGTACGTCTCAAC +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIKWRTT*IEVRLN
Trigger: GTTGAGACGTACTTCAATCAATGTTGTTCGCCACTT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTCTTCAAAGTACAGTTaGTCACACTCATCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLSSKYS*SHSSKS
Trigger: AGACTTTGATGAGTGTGACAAACTGTACTTTGAAGA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAAGACATCATTTCCTTaGACAAGAAATTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLKTSFP*TRNWTL
Trigger: CAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGAATTTAGTGTTGTTGTaGGGAAGGTTAATCACTAGG +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLNLVLL*GRLITR
Trigger: CCTAGTGATTAACCTTCCCAACAACAACACTAAATT...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACTTGTGGACAAATTTAGTGTaGTTGTTGGGAAGGTTAATC +
Preference number: 5 (lower is better)
Translates to: PVFLKEIHSLKQENRLNLWTNLV*LLGRLI
Trigger: GATTAACCTTCCCAACAACAACACTAAATTTGTCCA...CAAGTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCATGGACAAATTTAGTGTaGTTGTTGGGAAGGTTAATC +
Preference number: 5 (lower is better)
Translates to: NNIPGLAKWVRMRIQKEAWTNLV*LLGRLI
Trigger: GATTAACCTTCCCAACAACAACACTAAATTTGTCCA...TGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGCTAATCCAGGAATATTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAGCAACTTTTCCTACCTaGATCACCATTAATCAGCAC +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKIATFPT*ITINQH
Trigger: GTGCTGATTAATGGTGATCAAGGTAGGAAAAGTTGC...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATCCTCGTCATTTaGATGATTTGTGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLKILVI*MICGMG
Trigger: GCCCATGCCACAAATCATCAAAATGACGAGGATTTT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAAAATCCTCGTCATTTaGATGATTTGTGGCATGGGC +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFIKILVI*MICGMG
Trigger: GCCCATGCCACAAATCATCAAAATGACGAGGATTTT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430249.7
ENST00000673711.1
CDS-3UTR CAA 90 bp GCCAAATGGGTGAGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATCGTCATTTTGATGATTaGTGGCTCTTCCAACATTTT +
Preference number: 5 (lower is better)
Translates to: AKWVRMRIQKEAIHKHHDRHFDD*WLFQHF
Trigger: AAAATGTTGGAAGAGCCACAAATCATCAAAATGACG...ATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCTCACCCATTTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAAAATCCTCGTCATTTaGATGATTTGTGGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMKILVI*MICGSS
Trigger: GGAAGAGCCACAAATCATCAAAATGACGAGGATTTT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS TCA 90 bp TTAAAATATCACGCATCTTATACAAAAACCACTTGTCAATGTATGTaGGCTTCTCAATCTCATCAAGGGACATGTTGTCATCAATGGCCT +
Preference number: 5 (lower is better)
Translates to: LKYHASYTKTTCQCM*ASQSHQGTCCHQWP
Trigger: AGGCCATTGATGACAACATGTCCCTTGATGAGATTGAGAAGCTCACATACATTGACAAGTGGTTTTTGTATAAGATGCGTGATATTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATATTAGACTCCAAATATTaGCTAAGTCCCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKILDSKY*LSPSSS
Trigger: GGATGAACTGGGACTTAGCAAATATTTGGAGTCTAA...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATATTAGACTCCAAATATTaGCTAAGTCCCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFILDSKY*LSPSSS
Trigger: GGATGAACTGGGACTTAGCAAATATTTGGAGTCTAA...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTATTAGACTCCAAATATTaGCTAAGTCCCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLLDSKY*LSPSSS
Trigger: GGATGAACTGGGACTTAGCAAATATTTGGAGTCTAA...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAATCCCCTCATTTGTTaGATCGTTGACATTCACAAA +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNNPLIC*IVDIHK
Trigger: TTTGTGAATGTCAACGATCAAACAAATGAGGGGATT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAATCCCCTCATTTGTTaGATCGTTGACATTCACAAA +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMNPLIC*IVDIHK
Trigger: TTTGTGAATGTCAACGATCAAACAAATGAGGGGATT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATCTTCAAAGTACAGTTaGTCACACTCATCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQSSKYS*SHSSKS
Trigger: AGACTTTGATGAGTGTGACAAACTGTACTTTGAAGA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGTCTTCAAAGTACAGTTaGTCACACTCATCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMSSKYS*SHSSKS
Trigger: AGACTTTGATGAGTGTGACAAACTGTACTTTGAAGA...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAAAAGACATCATTTCCTTaGACAAGAAATTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQKTSFP*TRNWTL
Trigger: CAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTT...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGAGAATGAAGACATCATTTCCTTaGACAAGAAATTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: NIMGRDNNIPGLAKWVRMKTSFP*TRNWTL
Trigger: CAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTT...CATTCTCACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AAACCAGTATTCCTTAAAGAAATCCATAGTCTAAAGCAGGAGAATCGCTTGAACAAGACATCATTTCCTTaGACAAGAAATTGGACGTTG +
Preference number: 5 (lower is better)
Translates to: KPVFLKEIHSLKQENRLNKTSFP*TRNWTL
Trigger: CAACGTCCAATTTCTTGTCAAAGGAAATGATGTCTT...GTTCAAGCGATTCTCCTGCTTTAGACTATGGATTTCTTTAAGGAATACTGGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp GAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAAAATAAGCTTGAAACCTTCATaGTGTAATTGTTCAGCCACA +
Preference number: 5 (lower is better)
Translates to: EYSALLKCPEFADSVLKISLKPS*CNCSAT
Trigger: TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCT...TATTTTTAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AGAATGAGGATCCAAAAAGAAGCAATACACAAACATCATGATGGAAGGTTCATAAGCTTGAAACCTTCATaGTGTAATTGTTCAGCCACA +
Preference number: 5 (lower is better)
Translates to: RMRIQKEAIHKHHDGRFISLKPS*CNCSAT
Trigger: TGTGGCTGAACAATTACACAATGAAGGTTTCAAGCT...TATGAACCTTCCATCATGATGTTTGTGTATTGCTTCTTTTTGGATCCTCATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp AACTTCAATATAATGGGAAGGGATAACAATATTCCTGGATTAGCCAAATGGGTGTGGACAAATTTAGTGTaGTTGTTGGGAAGGTTAATC +
Preference number: 5 (lower is better)
Translates to: NFNIMGRDNNIPGLAKWVWTNLV*LLGRLI
Trigger: GATTAACCTTCCCAACAACAACACTAAATTTGTCCA...CACCCATTTGGCTAATCCAGGAATATTGTTATCCCTTCCCATTATATTGAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
CDS-3UTR CAA 90 bp CTACATAAACACTGTCTACCATCTGCTGATATAGTCCAGAAAACAAAACTGCAATTTGGAAAGATGGGTTaGAACAATGAACTAAGAGCT +
Preference number: 5 (lower is better)
Translates to: LHKHCLPSADIVQKTKLQFGKMG*NNELRA
Trigger: AGCTCTTAGTTCATTGTTCAAACCCATCTTTCCAAA...TTGCAGTTTTGTTTTCTGGACTATATCAGCAGATGGTAGACAGTGTTTATGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451903.3
CDS-3UTR CAA 90 bp TTTTTAGAGTATTCTGCCCTGTTAAAGTGTCCTGAGTTTGCAGATAGTGTTTTAAATCCCCTCATTTGTTaGATCGTTGACATTCACAAA +
Preference number: 5 (lower is better)
Translates to: FLEYSALLKCPEFADSVLNPLIC*IVDIHK
Trigger: TTTGTGAATGTCAACGATCAAACAAATGAGGGGATT...TAAAACACTATCTGCAAACTCAGGACACTTTAACAGGGCAGAATACTCTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000673630.1
ENST00000673711.1
CDS CCA 72 bp CAGGTACTCAGTGTCTATTGGCCCCGGGGTGACCTCTaGGTGGAACTGCACAGCGAAGAAGGGTTTGCTCTC +
Preference number: 6 (lower is better)
Translates to: QVLSVYWPRGDL*VELHSEEGFAL
Trigger: GAGAGCAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAGACACTGAGTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS TCA 72 bp AGGTGCCTGAGCCACCTTCAGCTCATCCAAGACAGCTaGGAAGATGGAGCGATCCTCAGCCCTGTCGATCTG +
Preference number: 6 (lower is better)
Translates to: RCLSHLQLIQDS*EDGAILSPVDL
Trigger: CAGATCGACAGGGCTGAGGATCGCTCCATCTTCTCAGCTGTCTTGGATGAGCTGAAGGTGGCTCAGGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 72 bp TACTCAGTGTCTATTGGCCCCGGGGTGACCTCTGGGTaGAACTGCACAGCGAAGAAGGGTTTGCTCTCATGC +
Preference number: 6 (lower is better)
Translates to: YSVSIGPGVTSG*NCTAKKGLLSC
Trigger: GCATGAGAGCAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAGACACTGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS GCA 72 bp GTGTCTATTGGCCCCGGGGTGACCTCTGGGTGGAACTaGACAGCGAAGAAGGGTTTGCTCTCATGCATAATC +
Preference number: 6 (lower is better)
Translates to: VSIGPGVTSGWN*TAKKGLLSCII
Trigger: GATTATGCATGAGAGCAAACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS GCA 72 bp GGCGGAACGGATCATCACTGGGTAGCCAATGGTGTCTaGTGCCTTCAGTGCATCCTCAATCGATTCCACTGC +
Preference number: 6 (lower is better)
Translates to: GGTDHHWVANGV*CLQCILNRFHC
Trigger: GCAGTGGAATCGATTGAGGATGCACTGAAGGCAGCAGACACCATTGGCTACCCAGTGATGATCCGTTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 72 bp AATCAAACAGGTACTCAGTGTCTATTGGCCCCGGGGTaGCCTCTGGGTGGAACTGCACAGCGAAGAAGGGTT +
Preference number: 6 (lower is better)
Translates to: NQTGTQCLLAPG*PLGGTAQRRRV
Trigger: AACCCTTCTTCGCTGTGCAGTTCCACCCAGAGGTCACCCCGGGGCCAATAGACACTGAGTACCTGTTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CAA 72 bp GCCCTGTCGATCTGCAGGGGGCTTGTGCCCATGATCTaGACACCATTCTTGTATAGAGGAACTGCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: ALSICRGLVPMI*TPFLYRGTARL
Trigger: CAACCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGATCATGGGCACAAGCCCCCTGCAGATCGACAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 72 bp GACTGGTGGGGCTTGGGTCACGTGCCTGTGTCTAGATaGAAGCGAGGCTGGGAATTCAAGTTCAAAATCCAT +
Preference number: 6 (lower is better)
Translates to: DWWGLGHVPVSR*KRGWEFKFKIH
Trigger: ATGGATTTTGAACTTGAATTCCCAGCCTCGCTTGCATCTAGACACAGGCACGTGACCCAAGCCCCACCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS CCA 72 bp GTGCATAGGCGGAACGGATCATCACTGGGTAGCCAATaGTGTCTGCTGCCTTCAGTGCATCCTCAATCGATT +
Preference number: 6 (lower is better)
Translates to: VHRRNGSSLGSQ*CLLPSVHPQSI
Trigger: AATCGATTGAGGATGCACTGAAGGCAGCAGACACCATTGGCTACCCAGTGATGATCCGTTCCGCCTATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 72 bp GTTTCTTCTGTCATGGACTCACTGGCACAGAGGAGCTaGGGAAATCTATTAGCTGACTGGAGGAACGCCTGC +
Preference number: 6 (lower is better)
Translates to: VSSVMDSLAQRS*GNLLADWRNAC
Trigger: GCAGGCGTTCCTCCAGTCAGCTAATAGATTTCCCCAGCTCCTCTGTGCCAGTGAGTCCATGACAGAAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497121.1
CDS CAA 90 bp GGGTTCCCCGGTCCTCCCGCGATCAAAATCCCATCATACTCCATCTaGGTGAAATCATGGTTCCAGGGAACTAAGTGCACTTCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GFPGPPAIKIPSYSI*VKSWFQGTKCTSAP
Trigger: AGGAGCTGAAGTGCACTTAGTTCCCTGGAACCATGATTTCACCAAGATGGAGTATGATGGGATTTTGATCGCGGGAGGACCGGGGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CAA 90 bp CGATCCTCAGCCCTGTCGATCTGCAGGGGGCTTGTGCCCATGATCTaGACACCATTCTTGTATAGAGGAACTGCCAGGTTGTTTGGAATC +
Preference number: 6 (lower is better)
Translates to: RSSALSICRGLVPMI*TPFLYRGTARLFGI
Trigger: GATTCCAAACAACCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGATCATGGGCACAAGCCCCCTGCAGATCGACAGGGCTGAGGATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CAA 90 bp CTGTCGATCTGCAGGGGGCTTGTGCCCATGATCTTGACACCATTCTaGTATAGAGGAACTGCCAGGTTGTTTGGAATCTGGCCTCCAACT +
Preference number: 6 (lower is better)
Translates to: LSICRGLVPMILTPF*YRGTARLFGIWPPT
Trigger: AGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGATCATGGGCACAAGCCCCCTGCAGATCGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 72 bp CTGGAAGTGGGATTCCTAGGGCAATCTTTGCAGCAATaGATGCCAATGGGTAGCCAGTGGCTTTTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LEVGFLGQSLQQ*MPMGSQWLLRP
Trigger: TGGCCTCAAAAGCCACTGGCTACCCATTGGCATTCATTGCTGCAAAGATTGCCCTAGGAATCCCACTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 72 bp AGGAACTGCCAGGTTGTTTGGAATCTGGCCTCCAACTaGTATGATGCAGCCACCACATGCCTCCTGATGGTA +
Preference number: 6 (lower is better)
Translates to: RNCQVVWNLASN*YDAATTCLLMV
Trigger: TACCATCAGGAGGCATGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 72 bp CATCACTGGGTAGCCAATGGTGTCTGCTGCCTTCAGTaGATCCTCAATCGATTCCACTGCAAAACTTGGAGC +
Preference number: 6 (lower is better)
Translates to: HHWVANGVCCLQ*ILNRFHCKTWS
Trigger: GCTCCAAGTTTTGCAGTGGAATCGATTGAGGATGCACTGAAGGCAGCAGACACCATTGGCTACCCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 72 bp GGAACGGATCATCACTGGGTAGCCAATGGTGTCTGCTaGCTTCAGTGCATCCTCAATCGATTCCACTGCAAA +
Preference number: 6 (lower is better)
Translates to: GTDHHWVANGVC*LQCILNRFHCK
Trigger: TTTGCAGTGGAATCGATTGAGGATGCACTGAAGGCAGCAGACACCATTGGCTACCCAGTGATGATCCGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 72 bp GTGTCCAGCCCCTACCTTCCCTGGATTCCTGACCATTaGCATCAGGAGTTCCCTATTTCTGAACATACTTCC +
Preference number: 6 (lower is better)
Translates to: VSSPYLPWIPDH*HQEFPISEHTS
Trigger: GGAAGTATGTTCAGAAATAGGGAACTCCTGATGGCAATGGTCAGGAATCCAGGGAAGGTAGGGGCTGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS GCA 72 bp TTGGACGTTGAATGGACCAGAGATGGCAAAAGCCTTTaGAATCTTCCGGGTAGCATCCTTCACCTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LDVEWTRDGKSL*NLPGSILHLLG
Trigger: TCCCAGCAGGTGAAGGATGCTACCCGGAAGATTGCAAAGGCTTTTGCCATCTCTGGTCCATTCAACGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645825.1
CDS CCA 72 bp AAGTACCATCGCTCAAGTAGAGTGGTTCTCAAACTGTaGTCCCTGGCAGAGCAGCATCAGCATTACCTGGGA +
Preference number: 6 (lower is better)
Translates to: KYHRSSRVVLKL*SLAEQHQHYLG
Trigger: TCCCAGGTAATGCTGATGCTGCTCTGCCAGGGACCACAGTTTGAGAACCACTCTACTTGAGCGATGGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS CCA 72 bp GGGTGGATGTTTTTCTTTAACCTCAGCTCCCTTGTCTaGGCCTCAGTGAGCCCAAGGCATTTTGAAATCTGC +
Preference number: 6 (lower is better)
Translates to: GWMFFFNLSSLV*ASVSPRHFEIC
Trigger: GCAGATTTCAAAATGCCTTGGGCTCACTGAGGCCCAGACAAGGGAGCTGAGGTTAAAGAAAAACATCCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 72 bp TTGGGTCACGTGCCTGTGTCTAGATGCAAGCGAGGCTaGGAATTCAAGTTCAAAATCCATGTAGGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: LGHVPVSRCKRG*EFKFKIHVGQE
Trigger: TTCCTGCCCTACATGGATTTTGAACTTGAATTCCCAGCCTCGCTTGCATCTAGACACAGGCACGTGACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS CAA 90 bp CACAGTCTCAGGATTGCAATTCACCACCACCGTCTTCTTGCCAAGTaGACGCAGTGTGCGGATACTAGAGACAGCACACCAATCAAATTC +
Preference number: 6 (lower is better)
Translates to: HSLRIAIHHHRLLAK*TQCADTRDSTPIKF
Trigger: GAATTTGATTGGTGTGCTGTCTCTAGTATCCGCACACTGCGTCAACTTGGCAAGAAGACGGTGGTGGTGAATTGCAATCCTGAGACTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 72 bp CAGCTGCCTGTCTTCCGTAGCCATAATGGACTCAACTaGAGTTCCCAGGACTTTCACACCATATTCCTTGAG +
Preference number: 6 (lower is better)
Translates to: QLPVFRSHNGLN*SSQDFHTIFLE
Trigger: CTCAAGGAATATGGTGTGAAAGTCCTGGGAACTTCAGTTGAGTCCATTATGGCTACGGAAGACAGGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 72 bp TCCATCTTGGTGAAATCATGGTTCCAGGGAACTAAGTaGACTTCAGCTCCTCGCTTTACTAGCAGGCGGATT +
Preference number: 6 (lower is better)
Translates to: SILVKSWFQGTK*TSAPRFTSRRI
Trigger: AATCCGCCTGCTAGTAAAGCGAGGAGCTGAAGTGCACTTAGTTCCCTGGAACCATGATTTCACCAAGATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CCA 72 bp TCTGCCCTCTGTTGGCCATGGACATCTTGTAGGTTTTaGCACCAGCAGCCAATCCTGTTATTAAGTTTCCTG +
Preference number: 6 (lower is better)
Translates to: SALCWPWTSCRF*HQQPILLLSFL
Trigger: CAGGAAACTTAATAACAGGATTGGCTGCTGGTGCCAAAACCTACAAGATGTCCATGGCCAACAGAGGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CCA 72 bp ATTGGGAGACGGGGAGTGAAACCTTCTATAGATGGGTaGCACATCCGTAAAGCTTTCTGGAAACTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: IGRRGVKPSIDG*HIRKAFWKLSS
Trigger: TGAGGAGAGTTTCCAGAAAGCTTTACGGATGTGCCACCCATCTATAGAAGGTTTCACTCCCCGTCTCCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 72 bp TTCTTGTATAGAGGAACTGCCAGGTTGTTTGGAATCTaGCCTCCAACTGATATGATGCAGCCACCACATGCC +
Preference number: 6 (lower is better)
Translates to: FLYRGTARLFGI*PPTDMMQPPHA
Trigger: GGCATGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCTATACAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CCA 72 bp GCTTTTGAACTAAAGTTTCAATTGGGTTTGTCTGACTaGTGGGGCTTGGGTCACGTGCCTGTGTCTAGATGC +
Preference number: 6 (lower is better)
Translates to: AFELKFQLGLSD*WGLGHVPVSRC
Trigger: GCATCTAGACACAGGCACGTGACCCAAGCCCCACCAGTCAGACAAACCCAATTGAAACTTTAGTTCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS CAA 72 bp GGTCCTCCCGCGATCAAAATCCCATCATACTCCATCTaGGTGAAATCATGGTTCCAGGGAACTAAGTGCACT +
Preference number: 6 (lower is better)
Translates to: GPPAIKIPSYSI*VKSWFQGTKCT
Trigger: AGTGCACTTAGTTCCCTGGAACCATGATTTCACCAAGATGGAGTATGATGGGATTTTGATCGCGGGAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CAA 90 bp GTGCCCATGATCTTGACACCATTCTTGTATAGAGGAACTGCCAGGTaGTTTGGAATCTGGCCTCCAACTGATATGATGCAGCCACCACAT +
Preference number: 6 (lower is better)
Translates to: VPMILTPFLYRGTAR*FGIWPPTDMMQPPH
Trigger: ATGTGGTGGCTGCATCATATCAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGATCATGGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 72 bp TGTTGTCCCCCAGGTGGAAAAGATAAATATCCAACATaGCAGTATCGACAGTTCCCAGCCAGGAAACCACTC +
Preference number: 6 (lower is better)
Translates to: CCPPGGKDKYPT*QYRQFPARKPL
Trigger: GAGTGGTTTCCTGGCTGGGAACTGTCGATACTGTCATGTTGGATATTTATCTTTTCCACCTGGGGGACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS CCA 72 bp CCTTCTATAGATGGGTGGCACATCCGTAAAGCTTTCTaGAAACTCTCCTCAAAGGTACGACCAATAGCCATG +
Preference number: 6 (lower is better)
Translates to: PSIDGWHIRKAF*KLSSKVRPIAM
Trigger: CATGGCTATTGGTCGTACCTTTGAGGAGAGTTTCCAGAAAGCTTTACGGATGTGCCACCCATCTATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CAA 72 bp CCACAGTCTACAGCTACCACTTTTGTGGGGTTTCCTTaGCCGTACACTTTGACATCCTTGGTTGAAACCTCA +
Preference number: 6 (lower is better)
Translates to: PQSTATTFVGFP*PYTLTSLVETS
Trigger: TGAGGTTTCAACCAAGGATGTCAAAGTGTACGGCAAAGGAAACCCCACAAAAGTGGTAGCTGTAGACTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CAA 72 bp TCCCTCATACTGGATGCTTTTGAACTAAAGTTTCAATaGGGTTTGTCTGACTGGTGGGGCTTGGGTCACGTG +
Preference number: 6 (lower is better)
Translates to: SLILDAFELKFQ*GLSDWWGLGHV
Trigger: CACGTGACCCAAGCCCCACCAGTCAGACAAACCCAATTGAAACTTTAGTTCAAAAGCATCCAGTATGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673630.1
CDS TCA 72 bp CACCAGCAGCCAATCCTGTTATTAAGTTTCCTGTACTaGTTCCAAACAATGGCTCCTTGCGATCACTCTCCA +
Preference number: 6 (lower is better)
Translates to: HQQPILLLSFLY*FQTMAPCDHSP
Trigger: TGGAGAGTGATCGCAAGGAGCCATTGTTTGGAATCAGTACAGGAAACTTAATAACAGGATTGGCTGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS TCA 72 bp TTCACCCACAATGCCCAAGTGGCGAACAACATTGATTaGAGTACGTCTCAACATCTGAAACTCGGCATTGGA +
Preference number: 6 (lower is better)
Translates to: FTHNAQVANNID*STSQHLKLGIG
Trigger: TCCAATGCCGAGTTTCAGATGTTGAGACGTACTTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 72 bp TGCATTCACCCACAATGCCCAAGTGGCGAACAACATTaGTTGAAGTACGTCTCAACATCTGAAACTCGGCAT +
Preference number: 6 (lower is better)
Translates to: CIHPQCPSGEQH*LKYVSTSETRH
Trigger: ATGCCGAGTTTCAGATGTTGAGACGTACTTCAATCAATGTTGTTCGCCACTTGGGCATTGTGGGTGAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 72 bp GGTTCCTCTACCCACGATTACACTTACAACCCAAACTaGCTGCCCCCTCATTTATACGCATTTCATTTCCAC +
Preference number: 6 (lower is better)
Translates to: GSSTHDYTYNPN*LPPHLYAFHFH
Trigger: GTGGAAATGAAATGCGTATAAATGAGGGGGCAGTCAGTTTGGGTTGTAAGTGTAATCGTGGGTAGAGGAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS GCA 72 bp CTTCAAAGTACAGTTTGTCACACTCATCAAAGTCTGTaGTCACAGTCTCAGGATTGCAATTCACCACCACCG +
Preference number: 6 (lower is better)
Translates to: LQSTVCHTHQSL*SQSQDCNSPPP
Trigger: CGGTGGTGGTGAATTGCAATCCTGAGACTGTGAGCACAGACTTTGATGAGTGTGACAAACTGTACTTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS GCA 72 bp CCTCTACCCACGATTACACTTACAACCCAAACTGACTaGCCCCTCATTTATACGCATTTCATTTCCACACAG +
Preference number: 6 (lower is better)
Translates to: PLPTITLTTQTD*PLIYTHFISTQ
Trigger: CTGTGTGGAAATGAAATGCGTATAAATGAGGGGGCAGTCAGTTTGGGTTGTAAGTGTAATCGTGGGTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS CCA 72 bp GCACTGGCTTCAACAAGGATATTTGGCAAAATACCCTaGCATAAATCCTGGTCAGCACTGAACTCTCAAACC +
Preference number: 6 (lower is better)
Translates to: ALASTRIFGKIP*HKSWSALNSQT
Trigger: GGTTTGAGAGTTCAGTGCTGACCAGGATTTATGCCAGGGTATTTTGCCAAATATCCTTGTTGAAGCCAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467353.1
CDS CCA 72 bp CCCACCCCAGATCTATTGAATCAGGAACTCTGGGAGTaGATCCTAGCAATTTGTTGTTTTACAAACCCTCCA +
Preference number: 6 (lower is better)
Translates to: PTPDLLNQELWE*ILAICCFTNPP
Trigger: TGGAGGGTTTGTAAAACAACAAATTGCTAGGATCCACTCCCAGAGTTCCTGATTCAATAGATCTGGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS CCA 72 bp ACTAGATTCCTGCCCTTACATCCTAGTTTCCAAGCATaGGTTCCTCTACCCACGATTACACTTACAACCCAA +
Preference number: 6 (lower is better)
Translates to: TRFLPLHPSFQA*VPLPTITLTTQ
Trigger: TTGGGTTGTAAGTGTAATCGTGGGTAGAGGAACCCATGCTTGGAAACTAGGATGTAAGGGCAGGAATCTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479988.1
CDS CAA 90 bp AGCACCAGCAAACCTGAAACCTTGATTCCATTAGACTCCAAATATTaGCTAAGTCCCAGTTCATCCAGAGCAGTAGTATCAGGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: STSKPETLIPLDSKY*LSPSSSRAVVSGAP
Trigger: TGGAGCTCCTGATACTACTGCTCTGGATGAACTGGGACTTAGCAAATATTTGGAGTCTAATGGAATCAAGGTTTCAGGTTTGCTGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS TCA 72 bp TCTAAGCATTCCTTGTGGTTCTTTTCTGAAGCCGTCTaGATCATCTATGTATGTGCATGCATGCCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SKHSLWFFSEAV*IIYVCACMPSL
Trigger: GAGAGAGGGCATGCATGCACATACATAGATGATTCAGACGGCTTCAGAAAAGAACCACAAGGAATGCTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451903.3
ENST00000674074.1
CDS CAA 72 bp ATCTTGACACCATTCTTGTATAGAGGAACTGCCAGGTaGTTTGGAATCTGGCCTCCAACTGATATGATGCAG +
Preference number: 6 (lower is better)
Translates to: ILTPFLYRGTAR*FGIWPPTDMMQ
Trigger: CTGCATCATATCAGTTGGAGGCCAGATTCCAAACAACCTGGCAGTTCCTCTATACAAGAATGGTGTCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS TCA 72 bp CAGTCTGGCATTCACTTCAATGATGCAGTATTCCATTaGGGTAGGATGAAGGGCAAACTGAATGTTGCATTC +
Preference number: 6 (lower is better)
Translates to: QSGIHFNDAVFH*GRMKGKLNVAF
Trigger: GAATGCAACATTCAGTTTGCCCTTCATCCTACCTCAATGGAATACTGCATCATTGAAGTGAATGCCAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CAA 72 bp ACTTCAGCTCCTCGCTTTACTAGCAGGCGGATTACATaGTTTTTAATCCCACAGTCTACAGCTACCACTTTT +
Preference number: 6 (lower is better)
Translates to: TSAPRFTSRRIT*FLIPQSTATTF
Trigger: AAAAGTGGTAGCTGTAGACTGTGGGATTAAAAACAATGTAATCCGCCTGCTAGTAAAGCGAGGAGCTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CAA 72 bp AGGATTCTCTCCAAGGACAACTCTTCAAAGTACAGTTaGTCACACTCATCAAAGTCTGTGCTCACAGTCTCA +
Preference number: 6 (lower is better)
Translates to: RILSKDNSSKYS*SHSSKSVLTVS
Trigger: TGAGACTGTGAGCACAGACTTTGATGAGTGTGACAAACTGTACTTTGAAGAGTTGTCCTTGGAGAGAATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000497121.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CAA 90 bp GGTTCAGACAACTCTTTTCTAAGATCTAAATTAGATGGCCATTCTTaGTTCATTGGGAGACGGGGAGTGAAACCTTCTATAGATGGGTGG +
Preference number: 6 (lower is better)
Translates to: GSDNSFLRSKLDGHS*FIGRRGVKPSIDGW
Trigger: CCACCCATCTATAGAAGGTTTCACTCCCCGTCTCCCAATGAACAAAGAATGGCCATCTAATTTAGATCTTAGAAAAGAGTTGTCTGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CAA 72 bp AAGAGTAAGAAAAAGCACTGGCTTCAACAAGGATATTaGGCAAAATACCCTGGCATAAATCCTGGTCAGCAC +
Preference number: 6 (lower is better)
Translates to: KSKKKHWLQQGY*AKYPGINPGQH
Trigger: GTGCTGACCAGGATTTATGCCAGGGTATTTTGCCAAATATCCTTGTTGAAGCCAGTGCTTTTTCTTACTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467353.1
CDS TCA 72 bp AAATTCTGTTTATTTGGATCCACAAAATCCACAGGCTaGCCTTCAAATTCAATCTTCCCAAGCATGGTACCC +
Preference number: 6 (lower is better)
Translates to: KFCLFGSTKSTG*PSNSIFPSMVP
Trigger: GGGTACCATGCTTGGGAAGATTGAATTTGAAGGTCAGCCTGTGGATTTTGTGGATCCAAATAAACAGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CAA 90 bp ACACCCATGGCATCAACATTTTCCATGTTACAGACAGTGACACAATaGTCATCAGCATCTCGAACCACTTCATATTCTATTTCTTTCCAA +
Preference number: 6 (lower is better)
Translates to: TPMASTFSMLQTVTQ*SSASRTTSYSISFQ
Trigger: TTGGAAAGAAATAGAATATGAAGTGGTTCGAGATGCTGATGACAATTGTGTCACTGTCTGTAACATGGAAAATGTTGATGCCATGGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000467353.1
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1
CDS CAA 72 bp AAACCTGAAACCTTGATTCCATTAGACTCCAAATATTaGCTAAGTCCCAGTTCATCCAGAGCAGTAGTATCA +
Preference number: 6 (lower is better)
Translates to: KPETLIPLDSKY*LSPSSSRAVVS
Trigger: TGATACTACTGCTCTGGATGAACTGGGACTTAGCAAATATTTGGAGTCTAATGGAATCAAGGTTTCAGGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000619804.1
ENST00000673510.1
ENST00000673630.1
ENST00000673711.1
CDS CAA 72 bp GATGAGTTCATGTCCTTTGTAGGGACATGGATGATATaGGAAATCGTCATTCTCAGTAAACTATTGCAAGGA +
Preference number: 6 (lower is better)
Translates to: DEFMSFVGTWMI*EIVILSKLLQG
Trigger: TCCTTGCAATAGTTTACTGAGAATGACGATTTCCAATATCATCCATGTCCCTACAAAGGACATGAACTCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671984.1
CDS CAA 72 bp AACTCTTTTCTAAGATCTAAATTAGATGGCCATTCTTaGTTCATTGGGAGACGGGGAGTGAAACCTTCTATA +
Preference number: 6 (lower is better)
Translates to: NSFLRSKLDGHS*FIGRRGVKPSI
Trigger: TATAGAAGGTTTCACTCCCCGTCTCCCAATGAACAAAGAATGGCCATCTAATTTAGATCTTAGAAAAGAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000233072.10
ENST00000430249.7
ENST00000451903.3
ENST00000673510.1
ENST00000673630.1
ENST00000673698.1
ENST00000673711.1
ENST00000674074.1