RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPNE7 (Homo sapiens)

Ensembl gene IDs: ENSG00000178773

Ensembl transcript IDs: ENST00000268720.9, ENST00000319518.13, ENST00000525982.5, ENST00000526232.1, ENST00000529800.5, ENST00000532500.1, ENST00000564421.1, ENST00000568977.1

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCCACCCTACGCCCTCCACATCTTCACGGTGTGCAGCCTGGGCTaGCCTCTCCGGCAGGGACACCCAGGCTTCTCGGGGGCAGGCCTC +
Preference number: 1 (lower is better)
Translates to: PPPYALHIFTVCSLG*PLRQGHPGFSGAGL
Trigger: GAGGCCTGCCCCCGAGAAGCCTGGGTGTCCCTGCCGGAGAGGCCAGCCCAGGCTGCACACCGTGAAGATGTGGAGGGCGTAGGGTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568977.1
3UTR CCA 90 bp CACTGCCCCCACCCTACGCCCTCCACATCTTCACGGTGTGCAGCCTaGGCTGGCCTCTCCGGCAGGGACACCCAGGCTTCTCGGGGGCAG +
Preference number: 1 (lower is better)
Translates to: HCPHPTPSTSSRCAA*AGLSGRDTQASRGQ
Trigger: CTGCCCCCGAGAAGCCTGGGTGTCCCTGCCGGAGAGGCCAGCCCAGGCTGCACACCGTGAAGATGTGGAGGGCGTAGGGTGGGGGCAGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568977.1
3UTR GCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTaGAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCT +
Preference number: 1 (lower is better)
Translates to: RLLGGRRELKGPQAC*RQRLYGPIPHCPHP
Trigger: AGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
3UTR-3UTR CCA 90 bp CCCAGTCCCTGCCCCTTCTCATCGGGGCAGGGTCTCCCGTGGATGAACTCCCAGGTCACCCTTCGGCCTTaGGGGCCCCAGAGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: PSPCPFSSGQGLPWMNSQVTLRP*GPQSRA
Trigger: GGCCCGGCTCTGGGGCCCCCAAGGCCGAAGGGTGAC...CTGGGAGTTCATCCACGGGAGACCCTGCCCCGATGAGAAGGGGCAGGGACTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
3UTR-3UTR CCA 90 bp CCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCGTCACCCTTCGGCCTTaGGGGCCCCAGAGCCGGGCC +
Preference number: 2 (lower is better)
Translates to: PKHVADRGCTDPFLTAPTVTLRP*GPQSRA
Trigger: GGCCCGGCTCTGGGGCCCCCAAGGCCGAAGGGTGAC...GGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
3UTR-3UTR CCA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGCGGCCAGCACGCACTTaGCCAGCGCCGCAGGGGATG +
Preference number: 2 (lower is better)
Translates to: LGGRRELKGPQACCRQRLRPART*PAPQGM
Trigger: CATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCG...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568977.1
3UTR-3UTR CCA 90 bp GCAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGGGGCAGGGTCTCCCGTaGATGAACTCCCAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: ADPMDPGAEARRQKAQGRGQGLP*MNSQLP
Trigger: AGGGAGCTGGGAGTTCATCCACGGGAGACCCTGCCC...CCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
3UTR-3UTR CCA 90 bp CCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCTCACGGTGTGCAGCCTaGGCTGGCCTCTCCGGCAGG +
Preference number: 2 (lower is better)
Translates to: PKHVADRGCTDPFLTAPTSRCAA*AGLSGR
Trigger: CCTGCCGGAGAGGCCAGCCCAGGCTGCACACCGTGA...GGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568977.1
3UTR-3UTR TCA 90 bp GCAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGAGGGTCTCCCGTGGATaGACTCCCAGCTCCCTCCAA +
Preference number: 2 (lower is better)
Translates to: ADPMDPGAEARRQKAQGRRVSRG*TPSSLQ
Trigger: TTGGAGGGAGCTGGGAGTTCATCCACGGGAGACCCT...CCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
3UTR-3UTR CCA 90 bp CAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGTGGGGACAGGTGTCTaGGTCCCCCAGGCTTTCTCG +
Preference number: 2 (lower is better)
Translates to: QTPWTQVQRPDGKKHRVGVGTGV*VPQAFS
Trigger: CGAGAAAGCCTGGGGGACCCAGACACCTGTCCCCAC...ACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
3UTR-3UTR GCA 90 bp CAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGTGTGGGGGCACCGGACCCCAAGCATGTTaGAGACAGAGGCTGTACGGA +
Preference number: 2 (lower is better)
Translates to: QVQRPDGKKHRVGGCGGTGPQAC*RQRLYG
Trigger: TCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC...GGTGCCCCCACACCCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
3UTR-3UTR GCA 90 bp GACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGGACCCCAAGCATGTTaGAGACAGAGGCTGTACGGA +
Preference number: 2 (lower is better)
Translates to: DPMDPGAEARRQKAQGRWGPQAC*RQRLYG
Trigger: TCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC...CCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
3UTR-3UTR CCA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACGTGTGCAGCCTGGGCTaGCCTCTCCGGCAGGGACAC +
Preference number: 2 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHVCSLG*PLRQGH
Trigger: GTGTCCCTGCCGGAGAGGCCAGCCCAGGCTGCACAC...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568977.1
3UTR-3UTR GCA 90 bp CCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCGGACCCCAAGCATGTTaGAGACAGAGGCTGTACGGA +
Preference number: 2 (lower is better)
Translates to: PKHVADRGCTDPFLTAPTGPQAC*RQRLYG
Trigger: TCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC...GGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
3UTR-3UTR GCA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGGGACCCCAAGCATGTTaGAGACAGAGGCTGTACGGA +
Preference number: 2 (lower is better)
Translates to: LGGRRELKGPQACCRQRLGPQAC*RQRLYG
Trigger: TCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
3UTR GCA 72 bp GGGCCACAATCTGCCATCCCTGCGTGTGGCCACCCCTaGACGTCCACCACCTCACGGCGCCAGCAGTCGCCC +
Preference number: 3 (lower is better)
Translates to: GPQSAIPACGHP*TSTTSRRQQSP
Trigger: GGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525982.5
3UTR GCA 72 bp CTGCCCCCACCCTACGCCCTCCACATCTTCACGGTGTaGAGCCTGGGCTGGCCTCTCCGGCAGGGACACCCA +
Preference number: 3 (lower is better)
Translates to: LPPPYALHIFTV*SLGWPLRQGHP
Trigger: TGGGTGTCCCTGCCGGAGAGGCCAGCCCAGGCTGCACACCGTGAAGATGTGGAGGGCGTAGGGTGGGGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568977.1
3UTR-3UTR CAA 90 bp GCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGTGTGGGGGCACCAGCAGGGGACCCCAAGCATGTaGCAGACAGAGGCTGTACGG +
Preference number: 3 (lower is better)
Translates to: AEARRQKAQGRWVWGHQQGTPSM*QTEAVR
Trigger: CCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC...CTGCTGGTGCCCCCACACCCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
3UTR-3UTR CAA 90 bp GGCTCAGGCAGGGCCAGGCATGGGGGCCTGTATTTTGTCACCCTTCGGCCTTGGGGGACCCCAAGCATGTaGCAGACAGAGGCTGTACGG +
Preference number: 3 (lower is better)
Translates to: GSGRARHGGLYFVTLRPWGTPSM*QTEAVR
Trigger: CCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC...CCAAGGCCGAAGGGTGACAAAATACAGGCCCCCATGCCTGGCCCTGCCTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
3UTR-3UTR CAA 90 bp CCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCGGGACCCCAAGCATGTaGCAGACAGAGGCTGTACGG +
Preference number: 3 (lower is better)
Translates to: PKHVADRGCTDPFLTAPTGTPSM*QTEAVR
Trigger: CCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC...GGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
3UTR GCA 72 bp GGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTaGAGACAGAGGCTGTACGGACCCATTCCTCACTGC +
Preference number: 3 (lower is better)
Translates to: GGRRELKGPQAC*RQRLYGPIPHC
Trigger: GCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR TCA 90 bp CCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAGGCAGAGGGCAGGTGCCGGCAGCTaGGCCGCAGCTCCACCTTCG +
Preference number: 4 (lower is better)
Translates to: PLHVHHLTAPAVAQGRQRAGAGS*AAAPPS
Trigger: CGAAGGTGGAGCTGCGGCTCAGCTGCCGGCACCTGC...CCTCTGCCTCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR TCA 90 bp GTGGCCACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAGCGTCCTCCTGACAGCTaGAGCCGCTGGGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: VATPARPPPHGASSRPGERPPDS*SRWAHA
Trigger: CGCATGGGCCCAGCGGCTTCAGCTGTCAGGAGGACG...CTCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp CATCCCTGCGTGTGGCCACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCTCGCGGTCCAGCAGGTaGCGGCAGCTGAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HPCVWPPLHVHHLTAPAVSRSSR*RQLSRS
Trigger: GCTGCGGCTCAGCTGCCGGCACCTGCTGGACCGCGA...GACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp TGTGGCCACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGACACTGGCCCTGCGCCTaGTGCAGCAACGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: CGHPCTSTTSRRQQSPRGHWPCA*CSNATL
Trigger: CAGCGTGGCGTTGCTGCAGCAGGCGCAGGGCCAGTG...TCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp CTGCGTGTGGCCACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCATCGGTTCTGCCCACCTaGACCCACTGGCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LRVATPARPPPHGASSRPSVLPT*THWPCA
Trigger: GGCGCAGGGCCAGTGGGTGCAGGTGGGCAGAACCGA...TGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp CACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAGGCAGAGCGTGTGGCCACCCCTaGACGTCCACCACCTCACGG +
Preference number: 4 (lower is better)
Translates to: HPCTSTTSRRQQSPRGGRACGHP*TSTTSR
Trigger: CCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGC...TCTGCCTCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR CCA 90 bp GCCATCCCTGCGTGTGGCCACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTGCCATCCCTGCGTGTaGCCACCCCTGCACGTCCAC +
Preference number: 4 (lower is better)
Translates to: AIPACGHPCTSTTSRRQQCHPCV*PPLHVH
Trigger: GTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCA...CTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR TCA 90 bp GCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGTGTGGGGGCACCAGCAGGCAGGTGCCGGCAGCTaGGCCGCAGCTCCACCTTCG +
Preference number: 4 (lower is better)
Translates to: AEARRQKAQGRWVWGHQQAGAGS*AAAPPS
Trigger: CGAAGGTGGAGCTGCGGCTCAGCTGCCGGCACCTGC...CTGCTGGTGCCCCCACACCCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp CACAATCTGCCATCCCTGCGTGTGGCCACCCCTGCACGTCCACCACCTCACGGCTGGGGTCGGACTTGGTaGGCGGGTCGCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HNLPSLRVATPARPPPHGWGRTW*AGRGPA
Trigger: TGCTGGACCGCGACCCGCTCACCAAGTCCGACCCCA...GCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR TCA 90 bp CCCAGTCCCTGCCCCTTCTCATCGGGGCAGGGTCTCCCGTGGATGAACTCCCAGCGTCCTCCTGACAGCTaGAGCCGCTGGGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: PSPCPFSSGQGLPWMNSQRPPDS*SRWAHA
Trigger: CGCATGGGCCCAGCGGCTTCAGCTGTCAGGAGGACG...CTGGGAGTTCATCCACGGGAGACCCTGCCCCGATGAGAAGGGGCAGGGACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGTGGCCCTGCGCCTGCTaGAGCAACGCCACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DPMDPGAEARRQKAQGRWWPCAC*SNATLG
Trigger: CCCCAGCGTGGCGTTGCTGCAGCAGGCGCAGGGCCA...CCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CCACAATCTGCCATCCCTGCGTGTGGCCACCCCTGCACGTCCACCACCTCACGGTGCACCCACTGGCCCTaGGCCTGCTGCAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: PQSAIPACGHPCTSTTSRCTHWP*ACCSNA
Trigger: GGCGTTGCTGCAGCAGGCGCAGGGCCAGTGGGTGCA...CCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp ACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAGGCAGAGCCAGGGTGCACTCCATaGCCCCCAGGAAATCGTCCT +
Preference number: 4 (lower is better)
Translates to: TPARPPPHGASSRPGEAEPGCTP*PPGNRP
Trigger: AGGACGATTTCCTGGGGGGCATGGAGTGCACCCTGG...CTCTGCCTCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp CCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAGGCAGAGGTACAATCTGCCATCCCTaGGTGTGGCCACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PCTSTTSRRQQSPRGGRGTICHP*VWPPLH
Trigger: GTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGT...ACCTCTGCCTCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp CCCAGTCCCTGCCCCTTCTCATCGGGGCAGGGTCTCCCGTGGATGAACTCCCAGGGCCGCCGCCACGCGTaGCACCTTGGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: PSPCPFSSGQGLPWMNSQGRRHA*HLGDDG
Trigger: CCCATCATCTCCAAGGTGGCACGCGTGGCGGCGGCC...CTGGGAGTTCATCCACGGGAGACCCTGCCCCGATGAGAAGGGGCAGGGACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GCAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGCGGCCAGCACGCACTTaGCCAGCGCCGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: ADPMDPGAEARRQKAQGRRPART*PAPQGM
Trigger: CATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCG...CCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GGCTCAGGCAGGGCCAGGCATGGGGGCCTGTATTTTGTCACCCTTCGGCCTTGGCGTCCTCCTGACAGCTaGAGCCGCTGGGCCCATGCG +
Preference number: 4 (lower is better)
Translates to: GSGRARHGGLYFVTLRPWRPPDS*SRWAHA
Trigger: CGCATGGGCCCAGCGGCTTCAGCTGTCAGGAGGACG...CCAAGGCCGAAGGGTGACAAAATACAGGCCCCCATGCCTGGCCCTGCCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GGCCACAATCTGCCATCCCTGCGTGTGGCCACCCCTGCACGTCCACCACCTCACGGACCACCTCGGTTCTaGCCACCTGCACCCACTGGC +
Preference number: 4 (lower is better)
Translates to: GHNLPSLRVATPARPPPHGPPRF*PPAPTG
Trigger: GCCAGTGGGTGCAGGTGGGCAGAACCGAGGTGGTCC...GTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp GACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGCGTGTGGCCACCCCTaGACGTCCACCACCTCACGG +
Preference number: 4 (lower is better)
Translates to: DPMDPGAEARRQKAQGRWACGHP*TSTTSR
Trigger: CCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGC...CCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR GCA 90 bp GGCCAGCACGCACTTGGCCAGCGCCGCAGGGGATGCGTTCTTGAGCTCCCGGAATCGCCGTCCAGGACCTaGATGTCGGTGAAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: GQHALGQRRRGCVLELPESPSRT*MSVKSA
Trigger: CGCCGACTTCACCGACATGCAGGTCCTGGACGGCGA...TTCCGGGAGCTCAAGAACGCATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568977.1
CDS-3UTR GCA 90 bp TGGCCACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAGGAGAGGTCATCATACCTaGCCCAGGGTGCACTCCATG +
Preference number: 4 (lower is better)
Translates to: WPPLHVHHLTAPAVAQGRRGHHT*PRVHSM
Trigger: CATGGAGTGCACCCTGGGGCAGGTATGATGACCTCT...CCTCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR CCA 90 bp GGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCTGGCCGGCCCAGGCGTaGCCGCGCTTCCCTGAACGC +
Preference number: 4 (lower is better)
Translates to: GTPSMLQTEAVRTHSSLPWPAQA*PRFPER
Trigger: GCGTTCAGGGAAGCGCGGCCACGCCTGGGCCGGCCA...GGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp CCCAGTCCCTGCCCCTTCTCATCGGGGCAGGGTCTCCCGTGGATGAACTCCCAGTGCCATCCCTGCGTGTaGCCACCCCTGCACGTCCAC +
Preference number: 4 (lower is better)
Translates to: PSPCPFSSGQGLPWMNSQCHPCV*PPLHVH
Trigger: GTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCA...CTGGGAGTTCATCCACGGGAGACCCTGCCCCGATGAGAAGGGGCAGGGACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR CCA 90 bp CTTGCTGGCCCTCCCCCACAAAGGTTAGACGCAAAGCAGAGCCCCCAGTCCCTGCGGCCAGCACGCACTTaGCCAGCGCCGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: LAGPPPQRLDAKQSPQSLRPART*PAPQGM
Trigger: CATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCG...CAGGGACTGGGGGCTCTGCTTTGCGTCTAACCTTTGTGGGGGAGGGCCAGCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GCTTCTCGGGGGCAGGCCTCTGTGGCTGTAGTACTCCACCACCTGCTTCGGGACGTGTGCAGCCTGGGCTaGCCTCTCCGGCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: ASRGQASVAVVLHHLLRDVCSLG*PLRQGH
Trigger: GTGTCCCTGCCGGAGAGGCCAGCCCAGGCTGCACAC...GTCCCGAAGCAGGTGGTGGAGTACTACAGCCACAGAGGCCTGCCCCCGAGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568977.1
CDS-3UTR CCA 90 bp TTGGCCAGCGCCGCAGGGGATGCGTTCTTGAGCTCCCGGAAGGGCACGAACTGTGGGCCTGGTGGGGACTaGAGGCTTCTGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: LASAAGDAFLSSRKGTNCGPGGD*RLLGGR
Trigger: CCGACCTCCCAGAAGCCTCCAGTCCCCACCAGGCCC...ACAGTTCGTGCCCTTCCGGGAGCTCAAGAACGCATCCCCTGCGGCGCTGGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568977.1
CDS-3UTR TCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACGCAGGTGCCGGCAGCTaGGCCGCAGCTCCACCTTCG +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHAGAGS*AAAPPS
Trigger: CGAAGGTGGAGCTGCGGCTCAGCTGCCGGCACCTGC...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGGACCTGCATGTCGGTaGAGTCGGCGTTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: DPMDPGAEARRQKAQGRWGPACR*SRRCPR
Trigger: GCGTGGGCAACGCCGACTTCACCGACATGCAGGTCC...CCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCTCGCGGTCCAGCAGGTaGCGGCAGCTGAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GTPSMLQTEAVRTHSSLPSRSSR*RQLSRS
Trigger: GCTGCGGCTCAGCTGCCGGCACCTGCTGGACCGCGA...GGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTGGCCCTGCGCCTGCTaGAGCAACGCCACGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LGGRRELKGPQACCRQRLWPCAC*SNATLG
Trigger: CCCCAGCGTGGCGTTGCTGCAGCAGGCGCAGGGCCA...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CTTGCTGGCCCTCCCCCACAAAGGTTAGACGCAAAGCAGAGCCCCCAGTCCCTGTGCACCCACTGGCCCTaGGCCTGCTGCAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: LAGPPPQRLDAKQSPQSLCTHWP*ACCSNA
Trigger: GGCGTTGCTGCAGCAGGCGCAGGGCCAGTGGGTGCA...CAGGGACTGGGGGCTCTGCTTTGCGTCTAACCTTTGTGGGGGAGGGCCAGCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp TGGGCCACAATCTGCCATCCCTGCGTGTGGCCACCCCTGCACGTCCACCACCTCACACGGGATGCAGGCTaGTCCGGACCACCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: WATICHPCVWPPLHVHHLTRDAG*SGPPRF
Trigger: GAACCGAGGTGGTCCGGAGCAGCCTGCATCCCGTGT...GAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGTGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp CCCAGTCCCTGCCCCTTCTCATCGGGGCAGGGTCTCCCGTGGATGAACTCCCAGTCGCCGTCCAGGACCTaGATGTCGGTGAAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: PSPCPFSSGQGLPWMNSQSPSRT*MSVKSA
Trigger: CGCCGACTTCACCGACATGCAGGTCCTGGACGGCGA...CTGGGAGTTCATCCACGGGAGACCCTGCCCCGATGAGAAGGGGCAGGGACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp AGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACTGGCCGGCCCAGGCGTaGCCGCGCTTCCCTGAACGC +
Preference number: 4 (lower is better)
Translates to: SMLQTEAVRTHSSLPPPYWPAQA*PRFPER
Trigger: GCGTTCAGGGAAGCGCGGCCACGCCTGGGCCGGCCA...GTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp CAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGTGTGGGGGCACCGTGAGGCACGCACAATaGCCTCCCGTGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: QVQRPDGKKHRVGGCGGTVRHAQ*PPVCRP
Trigger: TGGCCGACACACGGGAGGCCATTGTGCGTGCCTCAC...GGTGCCCCCACACCCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp CCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCGGCCAGCACGCACTTaGCCAGCGCCGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: PKHVADRGCTDPFLTAPTRPART*PAPQGM
Trigger: CATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCG...GGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CCA 90 bp AGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACGTCACCCTTCGGCCTTaGGGGCCCCAGAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SMLQTEAVRTHSSLPPPYVTLRP*GPQSRA
Trigger: GGCCCGGCTCTGGGGCCCCCAAGGCCGAAGGGTGAC...GTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp GGCTCAGGCAGGGCCAGGCATGGGGGCCTGTATTTTGTCACCCTTCGGCCTTGGAGGCTTTCTCGGGCGTaGGGGGACTGCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSGRARHGGLYFVTLRPWRLSRA*GDCLAG
Trigger: GCCAGCAAGGCAGTCCCCCCACGCCCGAGAAAGCCT...CCAAGGCCGAAGGGTGACAAAATACAGGCCCCCATGCCTGGCCCTGCCTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGAGGCTTTCTCGGGCGTaGGGGGACTGCCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: DPMDPGAEARRQKAQGRWRLSRA*GDCLAG
Trigger: GCCAGCAAGGCAGTCCCCCCACGCCCGAGAAAGCCT...CCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp TGTGGCCACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAAGTAGTAGTCCACCGTaGAGACCTTGGAGAACACGG +
Preference number: 4 (lower is better)
Translates to: CGHPCTSTTSRRQQSPRGSSSPP*RPWRTR
Trigger: CCGTGTTCTCCAAGGTCTTCACGGTGGACTACTACT...TCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR TCA 90 bp GCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGTGTGGGGGCACCAGCAGAGCCCTGGTCGTCGTTaGCCCTGTAGAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AEARRQKAQGRWVWGHQQSPGRR*PCRAPG
Trigger: TCCTGGAGCTCTACAGGGTCAACGACGACCAGGGCT...CTGCTGGTGCCCCCACACCCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGTGTGGGGGCACCAGAGTCAATGGCCACGGTaGAGTGGATCTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GAEARRQKAQGRWVWGHQSQWPR*SGSGSR
Trigger: GCGGCTGCCAGATCCACTTCACCGTGGCCATTGACT...CTGGTGCCCCCACACCCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACCACTGGCCCTGCGCCTaGTGCAGCAACGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: GGFWEVGGSLRDPKHVADHWPCA*CSNATL
Trigger: CAGCGTGGCGTTGCTGCAGCAGGCGCAGGGCCAGTG...GTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACTCGGTTCTGCCCACCTaGACCCACTGGCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHSVLPT*THWPCA
Trigger: GGCGCAGGGCCAGTGGGTGCAGGTGGGCAGAACCGA...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GCAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGCCCCATGGACCCAGGTaGAGAGGCCCGACGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ADPMDPGAEARRQKAQGRPHGPR*RGPTAK
Trigger: TTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGG...CCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp ACTGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCACGGCCAGCACGCACTTaGCCAGCGCCGCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: TGGFWEVGGSLRDPKHVARPART*PAPQGM
Trigger: CATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCG...TGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CCA 90 bp GACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCTCACGGTGTGCAGCCTaGGCTGGCCTCTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: DPKHVADRGCTDPFLTAPSRCAA*AGLSGR
Trigger: CCTGCCGGAGAGGCCAGCCCAGGCTGCACACCGTGA...GGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CCA 90 bp AAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTAGTCACCCTTCGGCCTTaGGGGCCCCAGAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: KHVADRGCTDPFLTAPTLVTLRP*GPQSRA
Trigger: GGCCCGGCTCTGGGGCCCCCAAGGCCGAAGGGTGAC...TAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp GGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCACCCCGCAGACCCCATaGACCCAGGTGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GPQACCRQRLYGPIPHCPTPQTP*TQVQRP
Trigger: GGGCCTCTGCACCTGGGTCCATGGGGTCTGCGGGGT...GGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCCCGGGTCGCAGAGGTTaGCAGCAACGGGGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: DPKHVADRGCTDPFLTAPPGRRG*QQRGKP
Trigger: CGGCTTCCCCCGTTGCTGCCAACCTCTGCGACCCGG...GGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR TCA 90 bp CATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACGCGGACCTGCATGTCGGTaGAGTCGGCGTTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: HVADRGCTDPFLTAPTLRGPACR*SRRCPR
Trigger: GCGTGGGCAACGCCGACTTCACCGACATGCAGGTCC...GCGTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR TCA 90 bp GGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCGGACCTGCATGTCGGTaGAGTCGGCGTTGCCCACGC +
Preference number: 4 (lower is better)
Translates to: GPQACCRQRLYGPIPHCPGPACR*SRRCPR
Trigger: GCGTGGGCAACGCCGACTTCACCGACATGCAGGTCC...GGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR TCA 90 bp GGCTCAGGCAGGGCCAGGCATGGGGGCCTGTATTTTGTCACCCTTCGGCCTTGGAGGGTCTCCCGTGGATaGACTCCCAGCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: GSGRARHGGLYFVTLRPWRVSRG*TPSSLQ
Trigger: TTGGAGGGAGCTGGGAGTTCATCCACGGGAGACCCT...CCAAGGCCGAAGGGTGACAAAATACAGGCCCCCATGCCTGGCCCTGCCTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp AAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCTCGCGGTCCAGCAGGTaGCGGCAGCTGAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: KGPQACCRQRLYGPIPHCSRSSR*RQLSRS
Trigger: GCTGCGGCTCAGCTGCCGGCACCTGCTGGACCGCGA...GCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCACTGGCCCTGCGCCTaGTGCAGCAACGCCACGCTG +
Preference number: 4 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDHWPCA*CSNATL
Trigger: CAGCGTGGCGTTGCTGCAGCAGGCGCAGGGCCAGTG...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGTGCACCCACTGGCCCTaGGCCTGCTGCAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: RLLGGRRELKGPQACCRQCTHWP*ACCSNA
Trigger: GGCGTTGCTGCAGCAGGCGCAGGGCCAGTGGGTGCA...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp ACAATCTGCCATCCCTGCGTGTGGCCACCCCTGCACGTCCACCACCTCACGGCGAAGCCGCTGGGCCCATaGGTGTCGTACACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TICHPCVWPPLHVHHLTAKPLGP*VSYTSK
Trigger: CTTTGAGGTGTACGACACGCATGGGCCCAGCGGCTT...CGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS-3UTR GCA 90 bp ACTGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGGCCGCCGCCACGCGTaGCACCTTGGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: TGGFWEVGGSLRDPKHVAGRRHA*HLGDDG
Trigger: CCCATCATCTCCAAGGTGGCACGCGTGGCGGCGGCC...TGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCAGGGGATGCGTGTGTaGTGTGCGTGTCTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GPQACCRQRLYGPIPHCPQGMRV*CACLAG
Trigger: CCCGGCGAGACACGCACAGCACACACGCATCCCCTG...GGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR CCA 90 bp CCCAGTCCCTGCCCCTTCTCATCGGGGCAGGGTCTCCCGTGGATGAACTCCCAGGGGACACCTCATACTTaGGAGGGATCCGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: PSPCPFSSGQGLPWMNSQGTPHT*EGSGLQ
Trigger: TTGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCC...CTGGGAGTTCATCCACGGGAGACCCTGCCCCGATGAGAAGGGGCAGGGACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp ACTGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGTGTGCAGCCTGGGCTaGCCTCTCCGGCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: TGGFWEVGGSLRDPKHVAVCSLG*PLRQGH
Trigger: GTGTCCCTGCCGGAGAGGCCAGCCCAGGCTGCACAC...TGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGGGGCCTGGTGGGGACTaGAGGCTTCTGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RLLGGRRELKGPQACCRQGPGGD*RLLGGR
Trigger: CCGACCTCCCAGAAGCCTCCAGTCCCCACCAGGCCC...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CCA 90 bp CAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTGGGCCTGGTGGGGACTaGAGGCTTCTGGGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: QACCRQRLYGPIPHCPHPGPGGD*RLLGGR
Trigger: CCGACCTCCCAGAAGCCTCCAGTCCCCACCAGGCCC...AGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTGTCACCCTTCGGCCTTaGGGGCCCCAGAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPVTLRP*GPQSRA
Trigger: GGCCCGGCTCTGGGGCCCCCAAGGCCGAAGGGTGAC...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTCCCCCACAAAGGTTAGACGCAAAGCAGAGCCCCCAGTCCCTGGTGGGGACAGGTGTCTaGGTCCCCCAGGCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: LAGPPPQRLDAKQSPQSLVGTGV*VPQAFS
Trigger: CGAGAAAGCCTGGGGGACCCAGACACCTGTCCCCAC...CAGGGACTGGGGGCTCTGCTTTGCGTCTAACCTTTGTGGGGGAGGGCCAGCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGACCCCGCAGACCCCATaGACCCAGGTGCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RLLGGRRELKGPQACCRQTPQTP*TQVQRP
Trigger: GGGCCTCTGCACCTGGGTCCATGGGGTCTGCGGGGT...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACGGGGAAGCCGCGTGGTaGATCCCAGGAGCCCCTTGT +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHGEAAW*IPGAPC
Trigger: ACAAGGGGCTCCTGGGATCCACCACGCGGCTTCCCC...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR TCA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGCGTTCCTGCCAAACTTaGGCAGCAGCGGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LGGRRELKGPQACCRQRLRSCQT*AAAGGS
Trigger: TGACCCGCCCGCTGCTGCTCAAGTTTGGCAGGAACG...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCCCTCGGCGATCACCGTaGTGGTGGACTTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: DPKHVADRGCTDPFLTAPPRRSP*WWTCQR
Trigger: ACGCTGGCAAGTCCACCATCACGGTGATCGCCGAGG...GGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTC
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACCCTCGGCGATCACCGTaGTGGTGGACTTGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGFWEVGGSLRDPKHVADPRRSP*WWTCQR
Trigger: ACGCTGGCAAGTCCACCATCACGGTGATCGCCGAGG...GTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp CTTGCTGGCCCTCCCCCACAAAGGTTAGACGCAAAGCAGAGCCCCCAGTCCCTGAGTCAATGGCCACGGTaGAGTGGATCTGGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LAGPPPQRLDAKQSPQSLSQWPR*SGSGSR
Trigger: GCGGCTGCCAGATCCACTTCACCGTGGCCATTGACT...CAGGGACTGGGGGCTCTGCTTTGCGTCTAACCTTTGTGGGGGAGGGCCAGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACCAGGGGATGCGTTCTTaGGCTCCCGGAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: GGFWEVGGSLRDPKHVADQGMRS*APGRAR
Trigger: TCGTGCCCTTCCGGGAGCTCAAGAACGCATCCCCTG...GTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR GCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGGGACCACCTCGGTTCTaGCCACCTGCACCCACTGGC +
Preference number: 4 (lower is better)
Translates to: RLLGGRRELKGPQACCRQGPPRF*PPAPTG
Trigger: GCCAGTGGGTGCAGGTGGGCAGAACCGAGGTGGTCC...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTGGACCACCTCGGTTCTaGCCACCTGCACCCACTGGC +
Preference number: 4 (lower is better)
Translates to: QACCRQRLYGPIPHCPHPGPPRF*PPAPTG
Trigger: GCCAGTGGGTGCAGGTGGGCAGAACCGAGGTGGTCC...AGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCAGTCCCACTGGGCCTaGCCCTCCTCAAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PKHVADRGCTDPFLTAPTQSHWA*PSSKAF
Trigger: GAAGGCCTTTGAGGAGGGGCAGGCCCAGTGGGACTG...GGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCAGTCCCACTGGGCCTaGCCCTCCTCAAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GPQACCRQRLYGPIPHCPQSHWA*PSSKAF
Trigger: GAAGGCCTTTGAGGAGGGGCAGGCCCAGTGGGACTG...GGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp CATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACGCGTGAGGCACGCACAATaGCCTCCCGTGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: HVADRGCTDPFLTAPTLRVRHAQ*PPVCRP
Trigger: TGGCCGACACACGGGAGGCCATTGTGCGTGCCTCAC...GCGTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp TTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGTCACCCTTCGGCCTTaGGGGCCCCAGAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LRDPKHVADRGCTDPFLTVTLRP*GPQSRA
Trigger: GGCCCGGCTCTGGGGCCCCCAAGGCCGAAGGGTGAC...AGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR TCA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGGGGTCGGACTTGGTaGGCGGGTCGCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHWGRTW*AGRGPA
Trigger: TGCTGGACCGCGACCCGCTCACCAAGTCCGACCCCA...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp AGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACCAGGGGATGCGTTCTTaGGCTCCCGGAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: SMLQTEAVRTHSSLPPPYQGMRS*APGRAR
Trigger: TCGTGCCCTTCCGGGAGCTCAAGAACGCATCCCCTG...GTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR TCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGCAGGGGATGCGTTCTTaGGCTCCCGGAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: RLLGGRRELKGPQACCRQQGMRS*APGRAR
Trigger: TCGTGCCCTTCCGGGAGCTCAAGAACGCATCCCCTG...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR TCA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACGCAGGGACAGGAGGCTaGCTGTGGGGACAGGATGTC +
Preference number: 4 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDAGTGG*LWGQDV
Trigger: GACATCCTGTCCCCACAGTCAGCCTCCTGTCCCTGC...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTCGGTTCTGCCCACCTaGACCCACTGGCCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHSVLPT*THWPCA
Trigger: GGCGCAGGGCCAGTGGGTGCAGGTGGGCAGAACCGA...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp ACTGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAACACGGGATGCAGGCTaGTCCGGACCACCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: TGGFWEVGGSLRDPKHVATRDAG*SGPPRF
Trigger: GAACCGAGGTGGTCCGGAGCAGCCTGCATCCCGTGT...TGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGCCAGGGTGCACTCCATaGCCCCCAGGAAATCGTCCT +
Preference number: 4 (lower is better)
Translates to: LGGRRELKGPQACCRQRLPGCTP*PPGNRP
Trigger: AGGACGATTTCCTGGGGGGCATGGAGTGCACCCTGG...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGACAATCTGCCATCCCTaGGTGTGGCCACCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LGGRRELKGPQACCRQRLTICHP*VWPPLH
Trigger: GTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGT...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR GCA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTGAGAGGCTTTCCCGGTaGTCTCCTCGGCCGCCGCCA +
Preference number: 4 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPERLSR*SPRPPP
Trigger: TGGCGGCGGCCGAGGAGAGCACCGGGAAAGCCTCTC...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGTCGCCGTCCAGGACCTaGATGTCGGTGAAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: RLLGGRRELKGPQACCRQSPSRT*MSVKSA
Trigger: CGCCGACTTCACCGACATGCAGGTCCTGGACGGCGA...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp GGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCTGTCGTCCAGCTTCCTaGCCCGGAAGGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTPSMLQTEAVRTHSSLPCRPAS*PGRRAP
Trigger: TGGAGCTCTCCTTCCGGGCCAGGAAGCTGGACGACA...GGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGGCCTCCACCACGCCCTaGATGCCTTCACACTCATCG +
Preference number: 4 (lower is better)
Translates to: LGGRRELKGPQACCRQRLASTTP*MPSHSS
Trigger: CGATGAGTGTGAAGGCATCCAGGGCGTGGTGGAGGC...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCGTAGAGCTGGACCCTaGGCAGGCAGTTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GTPSMLQTEAVRTHSSLPRRAGP*AGSSGR
Trigger: CCTACCAGAACTGCCTGCCCAGGGTCCAGCTCTACG...GGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACGTGAGGCACGCACAATaGCCTCCCGTGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDVRHAQ*PPVCRP
Trigger: TGGCCGACACACGGGAGGCCATTGTGCGTGCCTCAC...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTGTGTGCAGCCTGGGCTaGCCTCTCCGGCAGGGACAC +
Preference number: 4 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPVCSLG*PLRQGH
Trigger: GTGTCCCTGCCGGAGAGGCCAGCCCAGGCTGCACAC...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CCA 90 bp CAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTGGGCAGGGTCTCCCGTaGATGAACTCCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QACCRQRLYGPIPHCPHPGQGLP*MNSQLP
Trigger: AGGGAGCTGGGAGTTCATCCACGGGAGACCCTGCCC...AGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp AAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCGTTCCTGCCAAACTTaGGCAGCAGCGGGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: KGPQACCRQRLYGPIPHCRSCQT*AAAGGS
Trigger: TGACCCGCCCGCTGCTGCTCAAGTTTGGCAGGAACG...GCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACAGGGGTCGGACTTGCTaGAGAGGTCCTTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHRGRTC*RGPCRP
Trigger: TGGACGACAAGGACCTCTTCAGCAAGTCCGACCCCT...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCCTGTTCTCTGGTTCTTaGGCTCCCGGAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: DPKHVADRGCTDPFLTAPLFSGS*APGRAR
Trigger: TCGTGCCCTTCCGGGAGCTCAAGAACCAGAGAACAG...GGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR GCA 90 bp AAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCACACGGGATGCAGGCTaGTCCGGACCACCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: KGPQACCRQRLYGPIPHCTRDAG*SGPPRF
Trigger: GAACCGAGGTGGTCCGGAGCAGCCTGCATCCCGTGT...GCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCAAGCCGCTGGGCCCATaGGTGTCGTACACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GTPSMLQTEAVRTHSSLPKPLGP*VSYTSK
Trigger: CTTTGAGGTGTACGACACGCATGGGCCCAGCGGCTT...GGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACTTCTGGGCCACAATCTaGCCCAGGGTGCACTCCATG +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHFWATI*PRVHSM
Trigger: CATGGAGTGCACCCTGGGGCAGATTGTGGCCCAGAA...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000319518.13
CDS-3UTR GCA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACCAGCGCCGCAGGGGATaGGTGTGTGCTGTGCGTGTC +
Preference number: 4 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHQRRRG*VCAVRV
Trigger: GACACGCACAGCACACACGCATCCCCTGCGGCGCTG...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR CCA 90 bp ACTGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCATGTCGTCCAGCTTCCTaGCCCGGAAGGAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TGGFWEVGGSLRDPKHVACRPAS*PGRRAP
Trigger: TGGAGCTCTCCTTCCGGGCCAGGAAGCTGGACGACA...TGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCGGGACACCTCATACTTaGGAGGGATCCGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: DPKHVADRGCTDPFLTAPGTPHT*EGSGLQ
Trigger: TTGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCC...GGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp AGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACGCCTCCACCACGCCCTaGATGCCTTCACACTCATCG +
Preference number: 4 (lower is better)
Translates to: SMLQTEAVRTHSSLPPPYASTTP*MPSHSS
Trigger: CGATGAGTGTGAAGGCATCCAGGGCGTGGTGGAGGC...GTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp ACTGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCACGTAGAGCTGGACCCTaGGCAGGCAGTTCTGGTAGG +
Preference number: 4 (lower is better)
Translates to: TGGFWEVGGSLRDPKHVARRAGP*AGSSGR
Trigger: CCTACCAGAACTGCCTGCCCAGGGTCCAGCTCTACG...TGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp AAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCGGGCAGGGTCTCCCGTaGATGAACTCCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KGPQACCRQRLYGPIPHCGQGLP*MNSQLP
Trigger: AGGGAGCTGGGAGTTCATCCACGGGAGACCCTGCCC...GCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGGGTCGGACTTGCTaGAGAGGTCCTTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RLLGGRRELKGPQACCRQRGRTC*RGPCRP
Trigger: TGGACGACAAGGACCTCTTCAGCAAGTCCGACCCCT...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACAACTCAGAGAGACTTTaGAGGCCTCCCACACCGGGT +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHNSERL*RPPTPG
Trigger: ACCCGGTGTGGGAGGCCTTCAAAGTCTCTCTGAGTT...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCTCTGGCAGCCGCCCATaGTATAGTCCAGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GTPSMLQTEAVRTHSSLPSGSRP*YSPGRS
Trigger: ACTCCTTCCTGGACTATATCATGGGCGGCTGCCAGA...GGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACGCAGGGACAGGAGGCTaGCTGTGGGGACAGGATGTC +
Preference number: 4 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHAGTGG*LWGQDV
Trigger: GACATCCTGTCCCCACAGTCAGCCTCCTGTCCCTGC...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp ACTGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAAAGCCGCTGGGCCCATaGGTGTCGTACACCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TGGFWEVGGSLRDPKHVAKPLGP*VSYTSK
Trigger: CTTTGAGGTGTACGACACGCATGGGCCCAGCGGCTT...TGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCGGACCCCAAGCATGTTaGAGACAGAGGCTGTACGGA +
Preference number: 4 (lower is better)
Translates to: DPKHVADRGCTDPFLTAPGPQAC*RQRLYG
Trigger: TCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC...GGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CCA 90 bp TGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACGGGTCACCTTCTTCTaGGCCACAATCTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: WRLLGGRRELKGPQACCRRVTFF*ATICHP
Trigger: GGGATGGCAGATTGTGGCCCAGAAGAAGGTGACCCG...TCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR CCA 90 bp AGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACTTCACACAGTCCCACTaGGCCTGCCCCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SMLQTEAVRTHSSLPPPYFTQSH*ACPSSK
Trigger: CTTTGAGGAGGGGCAGGCCCAGTGGGACTGTGTGAA...GTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp CTTGCTGGCCCTCCCCCACAAAGGTTAGACGCAAAGCAGAGCCCCCAGTCCCTGAAGGAGTACACCCTGTaGAACTTGAGGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LAGPPPQRLDAKQSPQSLKEYTL*NLRSAR
Trigger: CCTGGCTGACCTCAAGTTCCACAGGGTGTACTCCTT...CAGGGACTGGGGGCTCTGCTTTGCGTCTAACCTTTGTGGGGGAGGGCCAGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGGGGACACCTCATACTTaGGAGGGATCCGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RLLGGRRELKGPQACCRQGTPHT*EGSGLQ
Trigger: TTGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCC...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACAGGCAGGGCCAGGCATaGGGGCCTGTATTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDRQGQA*GPVFCH
Trigger: GTGACAAAATACAGGCCCCCATGCCTGGCCCTGCCT...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
CDS-3UTR CCA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTGTGGGGACAGGTGTCTaGGTCCCCCAGGCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPVGTGV*VPQAFS
Trigger: CGAGAAAGCCTGGGGGACCCAGACACCTGTCCCCAC...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCAGTAGTAGTCCACCGTaGAGACCTTGGAGAACACGG +
Preference number: 4 (lower is better)
Translates to: GPQACCRQRLYGPIPHCPSSSPP*RPWRTR
Trigger: CCGTGTTCTCCAAGGTCTTCACGGTGGACTACTACT...GGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGTAGTAGTCCACCGTaGAGACCTTGGAGAACACGG +
Preference number: 4 (lower is better)
Translates to: GGFWEVGGSLRDPKHVADSSSPP*RPWRTR
Trigger: CCGTGTTCTCCAAGGTCTTCACGGTGGACTACTACT...GTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCGTCCTGGCAAGGTGTaGGGATTCCGTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPRPGKV*GFRAAQ
Trigger: CTGTGCTGCACGGAATCCTCACACCTTGCCAGGACG...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR TCA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTAGCCCTGGTCGTCGTTaGCCCTGTAGAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPSPGRR*PCRAPG
Trigger: TCCTGGAGCTCTACAGGGTCAACGACGACCAGGGCT...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACAGGGTCTCCCGTGGATaGACTCCCAGCTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHRVSRG*TPSSLQ
Trigger: TTGGAGGGAGCTGGGAGTTCATCCACGGGAGACCCT...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp CCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCACACTTTATTACTCCTaGAGCCCCACCGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: PKHVADRGCTDPFLTAPTTLYYS*SPTGRT
Trigger: GGTTCTGCCGGTGGGGCTTCAGGAGTAATAAAGTGT...GGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACTTGTCTCCTCGCAGCTaGAGAGGGAACTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHLSPRS*RGNSER
Trigger: TCTCTCTGAGTTCCCTCTGCAGCTGCGAGGAGACAA...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTGGACCCCAAGCATGTTaGAGACAGAGGCTGTACGGA +
Preference number: 4 (lower is better)
Translates to: QACCRQRLYGPIPHCPHPGPQAC*RQRLYG
Trigger: TCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC...AGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR GCA 90 bp TTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTCCCCATGGACCCAGGTaGAGAGGCCCGACGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LRDPKHVADRGCTDPFLTPHGPR*RGPTAK
Trigger: TTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGG...AGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp ACTGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCACCCAGGAGCCCCTTGTaGTGTTCTCTGGTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: TGGFWEVGGSLRDPKHVAPRSPL*CSLVLE
Trigger: CTCAAGAACCAGAGAACAGCACAAGGGGCTCCTGGG...TGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR CCA 90 bp TGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGAAAGAAGGACCCGTCCTaGCAAGGTGTGAGGATTCCG +
Preference number: 4 (lower is better)
Translates to: WRLLGGRRELKGPQACCRKKDPS*QGVRIP
Trigger: CGGAATCCTCACACCTTGCCAGGACGGGTCCTTCTT...TCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR TCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCAGGACGACCACTCCTaGGTTCTTATAACTGCGTCT +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHQDDHS*VLITAS
Trigger: AGACGCAGTTATAAGAACTCAGGAGTGGTCGTCCTG...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp CATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACGCCAGGACGACCACTCCTaGGTTCTTATAACTGCGTCT +
Preference number: 4 (lower is better)
Translates to: HVADRGCTDPFLTAPTLRQDDHS*VLITAS
Trigger: AGACGCAGTTATAAGAACTCAGGAGTGGTCGTCCTG...GCGTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR TCA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACACACTTTATTACTCCTaGAGCCCCACCGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDTLYYS*SPTGRT
Trigger: GGTTCTGCCGGTGGGGCTTCAGGAGTAATAAAGTGT...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CTTGCTGGCCCTCCCCCACAAAGGTTAGACGCAAAGCAGAGCCCCCAGTCCCTGACTCTCATCACGACTTaGAGAAGCCACTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LAGPPPQRLDAKQSPQSLTLITT*RSHFWA
Trigger: AGCCCAAAAGTGGCTTCTGCAAGTCGTGATGAGAGT...CAGGGACTGGGGGCTCTGCTTTGCGTCTAACCTTTGTGGGGGAGGGCCAGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR GCA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACTTGTCTCCTCGCAGCTaGAGAGGGAACTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDLSPRS*RGNSER
Trigger: TCTCTCTGAGTTCCCTCTGCAGCTGCGAGGAGACAA...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCTCCTCAAAGGCCTTCTaGATCTCCTCGAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: GPQACCRQRLYGPIPHCPSSKAF*ISSKVV
Trigger: TACCACCTTCGAGGAGATGCAGAAGGCCTTTGAGGA...GGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTTTCACACAGTCCCACTaGGCCTGCCCCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPFTQSH*ACPSSK
Trigger: CTTTGAGGAGGGGCAGGCCCAGTGGGACTGTGTGAA...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GCAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTCTTCTGCTTGTATTTaGGGTTCACACAGTCCCACT +
Preference number: 4 (lower is better)
Translates to: ADPMDPGAEARRQKAQGRSSACI*GSHSPT
Trigger: AGTGGGACTGTGTGAACCCCAAATACAAGCAGAAGA...CCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GCAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTTGATGGCAAAGTCATaGGACACCTCATACTTGGGA +
Preference number: 4 (lower is better)
Translates to: ADPMDPGAEARRQKAQGRLMAKS*DTSYLG
Trigger: TCCCAAGTATGAGGTGTCCCATGACTTTGCCATCAA...CCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTAGGCAGGGCCAGGCATaGGGGCCTGTATTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPRQGQA*GPVFCH
Trigger: GTGACAAAATACAGGCCCCCATGCCTGGCCCTGCCT...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
CDS-3UTR TCA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTCTGGCAGCCGCCCATaGTATAGTCCAGGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHSGSRP*YSPGRS
Trigger: ACTCCTTCCTGGACTATATCATGGGCGGCTGCCAGA...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACGTGCAGCACAGGAAGTaGTTAGCGCAGTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHVQHRK*LAQCPA
Trigger: TGCTGGACACTGCGCTAAGCACTTCCTGTGCTGCAC...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR GCA 90 bp CAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTTCCTCAAAGGCCTTCTaGATCTCCTCGAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: QACCRQRLYGPIPHCPHPSSKAF*ISSKVV
Trigger: TACCACCTTCGAGGAGATGCAGAAGGCCTTTGAGGA...AGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp TTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTAGGCAGGGCCAGGCATaGGGGCCTGTATTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LRDPKHVADRGCTDPFLTRQGQA*GPVFCH
Trigger: GTGACAAAATACAGGCCCCCATGCCTGGCCCTGCCT...AGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
CDS-3UTR CCA 90 bp CATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACGCTTGATGGCAAAGTCATaGGACACCTCATACTTGGGA +
Preference number: 4 (lower is better)
Translates to: HVADRGCTDPFLTAPTLRLMAKS*DTSYLG
Trigger: TCCCAAGTATGAGGTGTCCCATGACTTTGCCATCAA...GCGTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACTTGATGGCAAAGTCATaGGACACCTCATACTTGGGA +
Preference number: 4 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHLMAKS*DTSYLG
Trigger: TCCCAAGTATGAGGTGTCCCATGACTTTGCCATCAA...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CCA 90 bp AGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACTCTTCTGCTTGTATTTaGGGTTCACACAGTCCCACT +
Preference number: 4 (lower is better)
Translates to: SMLQTEAVRTHSSLPPPYSSACI*GSHSPT
Trigger: AGTGGGACTGTGTGAACCCCAAATACAAGCAGAAGA...GTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CCA 90 bp TTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTCCTTGTGCTGTTCTCTaGTTCTTGAGCTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: LRDPKHVADRGCTDPFLTPCAVL*FLSSRK
Trigger: CTTCCGGGAGCTCAAGAACCAGAGAACAGCACAAGG...AGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR GCA 90 bp GGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACCTGAGTTCTTATAACTaGGTCTCTTCTGCTTGTATT +
Preference number: 4 (lower is better)
Translates to: GGFWEVGGSLRDPKHVADLSSYN*VSSACI
Trigger: AATACAAGCAGAAGAGACGCAGTTATAAGAACTCAG...GTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR GCA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCTGAGTTCTTATAACTaGGTCTCTTCTGCTTGTATT +
Preference number: 4 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDLSSYN*VSSACI
Trigger: AATACAAGCAGAAGAGACGCAGTTATAAGAACTCAG...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CCACCCCTGCACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAGGCAGACGCTGGGGTCGGACTaGGTGAGCGGGTCGCGGTCC +
Preference number: 5 (lower is better)
Translates to: PPLHVHHLTAPAVAQGRQTLGSD*VSGSRS
Trigger: GGACCGCGACCCGCTCACCAAGTCCGACCCCAGCGT...CTGCCTCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000525982.5
CDS GCA 90 bp CCTTCTTCTGGGCCACAATCTGCCATCCCTGCGTGTGGCCACCCCTaGACGTCCACCACCTCACGGCGCCAGCAGTCGCCCAGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: PSSGPQSAIPACGHP*TSTTSRRQQSPRGG
Trigger: GCCTCCCCTGGGCGACTGCTGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGTGGCCCAGAAGAAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR CAA 90 bp GCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGGTGTGGGGGCACCAGCAGGCCACGCGTGCCACCTaGGAGATGATGGGCGCCACG +
Preference number: 5 (lower is better)
Translates to: AEARRQKAQGRWVWGHQQATRAT*EMMGAT
Trigger: CGTGGCGCCCATCATCTCCAAGGTGGCACGCGTGGC...CTGCTGGTGCCCCCACACCCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTTCGGCCAGCACGCACTaGGCCAGCGCCGCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: QTPWTQVQRPDGKKHRVGSASTH*ASAAGD
Trigger: ATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCGA...ACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS CCA 90 bp CTCGCCGGGTCGCAGAGGTTGGCAGCAACGGGGGAAGCCGCGTGGTaGATCCCAGGAGCCCCTTGTGCTGTTCTCTGGTTCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LAGSQRLAATGEAAW*IPGAPCAVLWFLSS
Trigger: GGAGCTCAAGAACCAGAGAACAGCACAAGGGGCTCCTGGGATCCACCACGCGGCTTCCCCCGTTGCTGCCAACCTCTGCGACCCGGCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR CAA 90 bp GGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCACGCTGGGGTCGGACTaGGTGAGCGGGTCGCGGTCC +
Preference number: 5 (lower is better)
Translates to: GTPSMLQTEAVRTHSSLPTLGSD*VSGSRS
Trigger: GGACCGCGACCCGCTCACCAAGTCCGACCCCAGCGT...GGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACGCCGGGTCGCAGAGGTaGGCAGCAACGGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GGFWEVGGSLRDPKHVADAGSQR*AATGEA
Trigger: GGCTTCCCCCGTTGCTGCCAACCTCTGCGACCCGGC...GTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS CCA 90 bp TGTCTCGCCGGGTCGCAGAGGTTGGCAGCAACGGGGGAAGCCGCGTaGTGGATCCCAGGAGCCCCTTGTGCTGTTCTCTGGTTCTTGAGC +
Preference number: 5 (lower is better)
Translates to: CLAGSQRLAATGEAA*WIPGAPCAVLWFLS
Trigger: GCTCAAGAACCAGAGAACAGCACAAGGGGCTCCTGGGATCCACCACGCGGCTTCCCCCGTTGCTGCCAACCTCTGCGACCCGGCGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS-3UTR CAA 90 bp AAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCACGCTGGGGTCGGACTaGGTGAGCGGGTCGCGGTCC +
Preference number: 5 (lower is better)
Translates to: KGPQACCRQRLYGPIPHCTLGSD*VSGSRS
Trigger: GGACCGCGACCCGCTCACCAAGTCCGACCCCAGCGT...GCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACGCGTTCCTGCCAAACTaGAGCAGCAGCGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHAFLPN*SSSGRV
Trigger: GACCCGCCCGCTGCTGCTCAAGTTTGGCAGGAACGC...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GCTTCTCGGGGGCAGGCCTCTGTGGCTGTAGTACTCCACCACCTGCTTCGGGACTGGGACACCTCATACTaGGGAGGGATCCGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: ASRGQASVAVVLHHLLRDWDTSY*GGIRAP
Trigger: TGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCCA...GTCCCGAAGCAGGTGGTGGAGTACTACAGCCACAGAGGCCTGCCCCCGAGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568977.1
CDS-3UTR CAA 90 bp AAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTATCGGCCAGCACGCACTaGGCCAGCGCCGCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: KHVADRGCTDPFLTAPTLSASTH*ASAAGD
Trigger: ATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCGA...TAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp GCAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGACCGTGATGGTGGACTaGCCAGCGTTCCTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: ADPMDPGAEARRQKAQGRTVMVD*PAFLPN
Trigger: GTTTGGCAGGAACGCTGGCAAGTCCACCATCACGGT...CCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTTCGGCCAGCACGCACTaGGCCAGCGCCGCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPSASTH*ASAAGD
Trigger: ATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCGA...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CAA 90 bp GGCTCAGGCAGGGCCAGGCATGGGGGCCTGTATTTTGTCACCCTTCGGCCTTGGATGGGGGCCTGTATTTaGTCACCCTTCGGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: GSGRARHGGLYFVTLRPWMGACI*SPFGLG
Trigger: CCCAAGGCCGAAGGGTGACAAAATACAGGCCCCCAT...CCAAGGCCGAAGGGTGACAAAATACAGGCCCCCATGCCTGGCCCTGCCTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
CDS-3UTR CAA 90 bp CAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTTCCACCGTGAAGACCTaGGAGAACACGGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: QTPWTQVQRPDGKKHRVGSTVKT*ENTGCR
Trigger: CCTGCATCCCGTGTTCTCCAAGGTCTTCACGGTGGA...ACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTTGCAGAAGCCACTTTaGGGCTGGCTGCCCCAGGGT +
Preference number: 5 (lower is better)
Translates to: LGGRRELKGPQACCRQRLLQKPL*GWLPQG
Trigger: ACCCTGGGGCAGCCAGCCCAAAAGTGGCTTCTGCAA...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR CAA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACTGGGACACCTCATACTaGGGAGGGATCCGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHWDTSY*GGIRAP
Trigger: TGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCCA...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTGCCACGCGTGCCACCTaGGAGATGATGGGCGCCACG +
Preference number: 5 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPATRAT*EMMGAT
Trigger: CGTGGCGCCCATCATCTCCAAGGTGGCACGCGTGGC...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp TTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTTCGGCCAGCACGCACTaGGCCAGCGCCGCAGGGGAT +
Preference number: 5 (lower is better)
Translates to: LRDPKHVADRGCTDPFLTSASTH*ASAAGD
Trigger: ATCCCCTGCGGCGCTGGCCAAGTGCGTGCTGGCCGA...AGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CAA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACGCTGTTCTCTGGTTCTaGAGCTCCCGGAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHAVLWF*SSRKGT
Trigger: CGTGCCCTTCCGGGAGCTCAAGAACCAGAGAACAGC...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS GCA 90 bp GGACCCGTCCTGGCAAGGTGTGAGGATTCCGTGCAGCACAGGAAGTaGTTAGCGCAGTGTCCAGCAGGGCCCAGCACATCAACAGACACT +
Preference number: 5 (lower is better)
Translates to: GPVLARCEDSVQHRK*LAQCPAGPSTSTDT
Trigger: AGTGTCTGTTGATGTGCTGGGCCCTGCTGGACACTGCGCTAAGCACTTCCTGTGCTGCACGGAATCCTCACACCTTGCCAGGACGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR CAA 90 bp GGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACTCCACCGTGAAGACCTaGGAGAACACGGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: GGFWEVGGSLRDPKHVADSTVKT*ENTGCR
Trigger: CCTGCATCCCGTGTTCTCCAAGGTCTTCACGGTGGA...GTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTTGCTGAAGAGGTCCTaGTCGTCCAGCTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LGGRRELKGPQACCRQRLLLKRS*SSSFLA
Trigger: GGCCAGGAAGCTGGACGACAAGGACCTCTTCAGCAA...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACGAACTCAGAGAGACTTaGAAGGCCTCCCACACCGGG +
Preference number: 5 (lower is better)
Translates to: GGFWEVGGSLRDPKHVADELRET*KASHTG
Trigger: CCCGGTGTGGGAGGCCTTCAAAGTCTCTCTGAGTTC...GTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGGAACTCAGAGAGACTTaGAAGGCCTCCCACACCGGG +
Preference number: 5 (lower is better)
Translates to: LGGRRELKGPQACCRQRLELRET*KASHTG
Trigger: CCCGGTGTGGGAGGCCTTCAAAGTCTCTCTGAGTTC...CAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACGCGGCACTTTAGAGGCCTaGTCTCCTCGCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: HVADRGCTDPFLTAPTLRGTLEA*SPRSCR
Trigger: TCTGCAGCTGCGAGGAGACAAGGCCTCTAAAGTGCC...GCGTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTACGCTACACCCTGTGGAACTaGAGGTCAGCCAGGACGACC +
Preference number: 5 (lower is better)
Translates to: HVADRGCTDPFLTAPTLRYTLWN*RSARTT
Trigger: GGTCGTCCTGGCTGACCTCAAGTTCCACAGGGTGTA...GCGTAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGCAGCAGGATGTAGTATaGAGAGGCTTTCCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: DPMDPGAEARRQKAQGRWQQDVV*RGFPGA
Trigger: AGCACCGGGAAAGCCTCTCAATACTACATCCTGCTG...CCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTGGGACCCCAAGCATGTaGCAGACAGAGGCTGTACGG +
Preference number: 5 (lower is better)
Translates to: QACCRQRLYGPIPHCPHPGTPSM*QTEAVR
Trigger: CCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC...AGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp TGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGAGGGACCCCAAGCATGTaGCAGACAGAGGCTGTACGG +
Preference number: 5 (lower is better)
Translates to: WRLLGGRRELKGPQACCRGTPSM*QTEAVR
Trigger: CCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC...TCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS-3UTR CAA 90 bp AGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGGGGACCCCAAGCATGTaGCAGACAGAGGCTGTACGG +
Preference number: 5 (lower is better)
Translates to: RLLGGRRELKGPQACCRQGTPSM*QTEAVR
Trigger: CCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC...CTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
ENST00000568977.1
CDS GCA 90 bp TGTCCAGCAGGGCCCAGCACATCAACAGACACTCTCATCACGACTTaGAGAAGCCACTTTTGGGCTGGCTGCCCCAGGGTGCACTCCATG +
Preference number: 5 (lower is better)
Translates to: CPAGPSTSTDTLITT*RSHFWAGCPRVHSM
Trigger: CATGGAGTGCACCCTGGGGCAGCCAGCCCAAAAGTGGCTTCTGCAAGTCGTGATGAGAGTGTCTGTTGATGTGCTGGGCCCTGCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR CAA 90 bp CAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTCACTCTCATCACGACTaGCAGAAGCCACTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: QTPWTQVQRPDGKKHRVGHSHHD*QKPLLG
Trigger: GCCCAAAAGTGGCTTCTGCAAGTCGTGATGAGAGTG...ACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS-3UTR CAA 90 bp TTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCGTTCCTGCCAAACTaGAGCAGCAGCGGGCGGGTC +
Preference number: 5 (lower is better)
Translates to: LRDPKHVADRGCTDPFLTAFLPN*SSSGRV
Trigger: GACCCGCCCGCTGCTGCTCAAGTTTGGCAGGAACGC...AGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACTTGCTGAAGAGGTCCTaGTCGTCCAGCTTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDLLKRS*SSSFLA
Trigger: GGCCAGGAAGCTGGACGACAAGGACCTCTTCAGCAA...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTAGGAAGGGGTCGGACTaGCTGAAGAGGTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: QACCRQRLYGPIPHCPHPRKGSD*LKRSLS
Trigger: CGACAAGGACCTCTTCAGCAAGTCCGACCCCTTCCT...AGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACGGCACTTTAGAGGCCTaGTCTCCTCGCAGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: VGGSLRDPKHVADRGCTDGTLEA*SPRSCR
Trigger: TCTGCAGCTGCGAGGAGACAAGGCCTCTAAAGTGCC...GTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp AAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTAGGGACCCCAAGCATGTaGCAGACAGAGGCTGTACGG +
Preference number: 5 (lower is better)
Translates to: KHVADRGCTDPFLTAPTLGTPSM*QTEAVR
Trigger: CCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCC...TAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp TGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGAATGGGGGCCTGTATTTaGTCACCCTTCGGCCTTGGG +
Preference number: 5 (lower is better)
Translates to: WRLLGGRRELKGPQACCRMGACI*SPFGLG
Trigger: CCCAAGGCCGAAGGGTGACAAAATACAGGCCCCCAT...TCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000526232.1
CDS-3UTR CAA 90 bp AAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCAGGAAGGGGTCGGACTaGCTGAAGAGGTCCTTGTCG +
Preference number: 5 (lower is better)
Translates to: KGPQACCRQRLYGPIPHCRKGSD*LKRSLS
Trigger: CGACAAGGACCTCTTCAGCAAGTCCGACCCCTTCCT...GCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp AAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTATACACCCTGTGGAACTaGAGGTCAGCCAGGACGACC +
Preference number: 5 (lower is better)
Translates to: KHVADRGCTDPFLTAPTLYTLWN*RSARTT
Trigger: GGTCGTCCTGGCTGACCTCAAGTTCCACAGGGTGTA...TAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGGGACACCTCATACTaGGGAGGGATCCGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHWDTSY*GGIRAP
Trigger: TGGAGCCCGGATCCCTCCCAAGTATGAGGTGTCCCA...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp GACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTGGTCCTCAGGGTTGAAATaGATGGCAAAGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: DPMDPGAEARRQKAQGRWSSGLK*MAKSWD
Trigger: GTCCCATGACTTTGCCATCAATTTCAACCCTGAGGA...CCACCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACACCGTGATGGTGGACTaGCCAGCGTTCCTGCCAAAC +
Preference number: 5 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHTVMVD*PAFLPN
Trigger: GTTTGGCAGGAACGCTGGCAAGTCCACCATCACGGT...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GCAGACCCCATGGACCCAGGTGCAGAGGCCCGACGGCAAAAAGCACAGGGTAGGTCATCGTCCTCAGGGTaGAAATTGATGGCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ADPMDPGAEARRQKAQGRSSSSG*KLMAKS
Trigger: TGACTTTGCCATCAATTTCAACCCTGAGGACGATGA...CCTACCCTGTGCTTTTTGCCGTCGGGCCTCTGCACCTGGGTCCATGGGGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp TGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACAGCAGGATGTAGTATaGAGAGGCTTTCCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: WRLLGGRRELKGPQACCRQQDVV*RGFPGA
Trigger: AGCACCGGGAAAGCCTCTCAATACTACATCCTGCTG...TCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS CCA 90 bp CGGGGTCTGTGCCGGGCTCCTTGGATGACACGTAGAGACTGTGGCTaGTTCACTCAAACGCTCACTCCAGTTTCTCCTCGTTCACGTTTT +
Preference number: 5 (lower is better)
Translates to: RGLCRAPWMTRRDCG*FTQTLTPVSPRSRF
Trigger: AAAACGTGAACGAGGAGAAACTGGAGTGAGCGTTTGAGTGAACCAGCCACAGTCTCTACGTGTCATCCAAGGAGCCCGGCACAGACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532500.1
CDS-3UTR CAA 90 bp TGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACTCTTCTGCTTGTATTaGGGGTTCACACAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: WRLLGGRRELKGPQACCRLFCLY*GFTQSH
Trigger: GTGGGACTGTGTGAACCCCAAATACAAGCAGAAGAG...TCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp TGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGACTGCGTCTCTTCTGCTaGTATTTGGGGTTCACACAG +
Preference number: 5 (lower is better)
Translates to: WRLLGGRRELKGPQACCRLRLFC*YLGFTQ
Trigger: CTGTGTGAACCCCAAATACAAGCAGAAGAGACGCAG...TCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp TGGAGGCTTCTGGGAGGTCGGAGGGAGCTTAAGGGACCCCAAGCATGTTGCAGATCCTCAGGGTTGAAATaGATGGCAAAGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: WRLLGGRRELKGPQACCRSSGLK*MAKSWD
Trigger: GTCCCATGACTTTGCCATCAATTTCAACCCTGAGGA...TCTGCAACATGCTTGGGGTCCCTTAAGCTCCCTCCGACCTCCCAGAAGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp CCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACTCATCGTCCTCAGGGTaGAAATTGATGGCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: PQACCRQRLYGPIPHCPHSSSSG*KLMAKS
Trigger: TGACTTTGCCATCAATTTCAACCCTGAGGACGATGA...GTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACCTCTTCTGCTTGTATTaGGGGTTCACACAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHLFCLY*GFTQSH
Trigger: GTGGGACTGTGTGAACCCCAAATACAAGCAGAAGAG...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp GAGCTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCTGCGTCTCTTCTGCTaGTATTTGGGGTTCACACAG +
Preference number: 5 (lower is better)
Translates to: ELKGPQACCRQRLYGPIPLRLFC*YLGFTQ
Trigger: CTGTGTGAACCCCAAATACAAGCAGAAGAGACGCAG...AGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS-3UTR CAA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTCCTCAGGGTTGAAATaGATGGCAAAGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHSSGLK*MAKSWD
Trigger: GTCCCATGACTTTGCCATCAATTTCAACCCTGAGGA...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp AAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACTGCCCCCACCCTATCATCGTCCTCAGGGTaGAAATTGATGGCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: KHVADRGCTDPFLTAPTLSSSSG*KLMAKS
Trigger: TGACTTTGCCATCAATTTCAACCCTGAGGACGATGA...TAGGGTGGGGGCAGTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000568977.1
CDS-3UTR CAA 90 bp CTTAAGGGACCCCAAGCATGTTGCAGACAGAGGCTGTACGGACCCATTCCTCACCAGCAGGATGTAGTATaGCTTCACACTCATCGTCCT +
Preference number: 5 (lower is better)
Translates to: LKGPQACCRQRLYGPIPHQQDVV*LHTHRP
Trigger: AGGACGATGAGTGTGAAGCAATACTACATCCTGCTG...GTGAGGAATGGGTCCGTACAGCCTCTGTCTGCAACATGCTTGGGGTCCCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568977.1
CDS TCA 90 bp GGAGTACACCCTGTGGAACTTGAGGTCAGCCAGGACGACCACTCCTaGGTTCTTATAACTGCGTCTCTTCTGCTTGTATTTGGGGTTCAC +
Preference number: 5 (lower is better)
Translates to: GVHPVELEVSQDDHS*VLITASLLLVFGVH
Trigger: GTGAACCCCAAATACAAGCAGAAGAGACGCAGTTATAAGAACTCAGGAGTGGTCGTCCTGGCTGACCTCAAGTTCCACAGGGTGTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000532500.1
CDS CCA 72 bp TGCCCGCGAGTCGGCGCCGCCGCGGCGCCCGGGAAATaGTGGCCGGCCCAGGCGTGGCCGCGCTTCCCTGAA +
Preference number: 6 (lower is better)
Translates to: CPRVGAAAAPGK*WPAQAWPRFPE
Trigger: TTCAGGGAAGCGCGGCCACGCCTGGGCCGGCCACCATTTCCCGGGCGCCGCGGCGGCGCCGACTCGCGGGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000525982.5
CDS CAA 90 bp CACTGGCCCTGCGCCTGCTGCAGCAACGCCACGCTGGGGTCGGACTaGGTGAGCGGGTCGCGGTCCAGCAGGTGCCGGCAGCTGAGCCGC +
Preference number: 6 (lower is better)
Translates to: HWPCACCSNATLGSD*VSGSRSSRCRQLSR
Trigger: GCGGCTCAGCTGCCGGCACCTGCTGGACCGCGACCCGCTCACCAAGTCCGACCCCAGCGTGGCGTTGCTGCAGCAGGCGCAGGGCCAGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000525982.5
CDS CAA 72 bp TGCGCCTGCTGCAGCAACGCCACGCTGGGGTCGGACTaGGTGAGCGGGTCGCGGTCCAGCAGGTGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: CACCSNATLGSD*VSGSRSSRCRQ
Trigger: CTGCCGGCACCTGCTGGACCGCGACCCGCTCACCAAGTCCGACCCCAGCGTGGCGTTGCTGCAGCAGGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000525982.5
CDS GCA 72 bp GGCTTTCCCGGTGCTCTCCTCGGCCGCCGCCACGCGTaGCACCTTGGAGATGATGGGCGCCACGTTGGTGGG +
Preference number: 6 (lower is better)
Translates to: GFPGALLGRRHA*HLGDDGRHVGG
Trigger: CCCACCAACGTGGCGCCCATCATCTCCAAGGTGGCACGCGTGGCGGCGGCCGAGGAGAGCACCGGGAAAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000529800.5
CDS CCA 72 bp GGGTCGCAGAGGTTGGCAGCAACGGGGGAAGCCGCGTaGTGGATCCCAGGAGCCCCTTGTGCTGTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: GSQRLAATGEAA*WIPGAPCAVLW
Trigger: CCAGAGAACAGCACAAGGGGCTCCTGGGATCCACCACGCGGCTTCCCCCGTTGCTGCCAACCTCTGCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS CCA 72 bp GGGTCGCAGAGGTTGGCAGCAACGGGGGAAGCCGCGTaGTGGATCCCAGGAGCCCCTTGTGCTGTTCTCTGC +
Preference number: 6 (lower is better)
Translates to: GSQRLAATGEAA*WIPGAPCAVLC
Trigger: GCAGAGAACAGCACAAGGGGCTCCTGGGATCCACCACGCGGCTTCCCCCGTTGCTGCCAACCTCTGCGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564421.1
CDS GCA 72 bp GGGGGAAGCCGCGTGGTGGATCCCAGGAGCCCCTTGTaGTGTTCTCTGGTTCTTGAGCTCCCGGAAGGGCAC +
Preference number: 6 (lower is better)
Translates to: GGSRVVDPRSPL*CSLVLELPEGH
Trigger: GTGCCCTTCCGGGAGCTCAAGAACCAGAGAACAGCACAAGGGGCTCCTGGGATCCACCACGCGGCTTCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS CCA 72 bp ACCTTCTTCTGGGCCACAATCTGCCATCCCTGCGTGTaGCCACCCCTGCACGTCCACCACCTCACGGCGCCA +
Preference number: 6 (lower is better)
Translates to: TFFWATICHPCV*PPLHVHHLTAP
Trigger: TGGCGCCGTGAGGTGGTGGACGTGCAGGGGTGGCCACACGCAGGGATGGCAGATTGTGGCCCAGAAGAAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS CCA 72 bp TCGCAGAGGTTGGCAGCAACGGGGGAAGCCGCGTGGTaGATCCCAGGAGCCCCTTGTGCTGTTCTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: SQRLAATGEAAW*IPGAPCAVLWF
Trigger: GAACCAGAGAACAGCACAAGGGGCTCCTGGGATCCACCACGCGGCTTCCCCCGTTGCTGCCAACCTCTGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526232.1
CDS CCA 72 bp TCGCAGAGGTTGGCAGCAACGGGGGAAGCCGCGTGGTaGATCCCAGGAGCCCCTTGTGCTGTTCTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: SQRLAATGEAAW*IPGAPCAVLCF
Trigger: AAAGCAGAGAACAGCACAAGGGGCTCCTGGGATCCACCACGCGGCTTCCCCCGTTGCTGCCAACCTCTGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564421.1
CDS CAA 72 bp ACCGTGATGGTGGACTTGCCAGCGTTCCTGCCAAACTaGAGCAGCAGCGGGCGGGTCACCTTCTTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: TVMVDLPAFLPN*SSSGRVTFFWA
Trigger: GGCCCAGAAGAAGGTGACCCGCCCGCTGCTGCTCAAGTTTGGCAGGAACGCTGGCAAGTCCACCATCACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000268720.9
ENST00000319518.13
CDS CAA 90 bp GTGTCCAGCAGGGCCCAGCACATCAACAGACACTCTCATCACGACTaGCAGAAGCCACTTTTGGGCTGGCTGCCCCAGGGTGCACTCCAT +
Preference number: 6 (lower is better)
Translates to: VSSRAQHINRHSHHD*QKPLLGWLPQGALH
Trigger: ATGGAGTGCACCCTGGGGCAGCCAGCCCAAAAGTGGCTTCTGCAAGTCGTGATGAGAGTGTCTGTTGATGTGCTGGGCCCTGCTGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS CAA 72 bp AGGGCCCAGCACATCAACAGACACTCTCATCACGACTaGCAGAAGCCACTTTTGGGCTGGCTGCCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: RAQHINRHSHHD*QKPLLGWLPQG
Trigger: ACCCTGGGGCAGCCAGCCCAAAAGTGGCTTCTGCAAGTCGTGATGAGAGTGTCTGTTGATGTGCTGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268720.9
CDS CCA 72 bp TGCCGGGCTCCTTGGATGACACGTAGAGACTGTGGCTaGTTCACTCAAACGCTCACTCCAGTTTCTCCTCGT +
Preference number: 6 (lower is better)
Translates to: CRAPWMTRRDCG*FTQTLTPVSPR
Trigger: ACGAGGAGAAACTGGAGTGAGCGTTTGAGTGAACCAGCCACAGTCTCTACGTGTCATCCAAGGAGCCCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532500.1
CDS CAA 90 bp AGCCGCGTGGTGGATCCCAGGAGCCCCTTGTGCTGTTCTCTGCTTTaGTGTAGATTCGACAAGTTTCAAAACGGTGGAGGGTGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: SRVVDPRSPLCCSLL*CRFDKFQNGGGCFR
Trigger: CCTGAAACACCCTCCACCGTTTTGAAACTTGTCGAATCTACACAAAAGCAGAGAACAGCACAAGGGGCTCCTGGGATCCACCACGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564421.1
CDS CCA 72 bp CTGAGTTCTTATAACTGCGTCTCTTCTGCTTGTATTTaGGGTTCACACAGTCCCACTGGGCCTGCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: LSSYNCVSSACI*GSHSPTGPAPP
Trigger: AGGAGGGGCAGGCCCAGTGGGACTGTGTGAACCCCAAATACAAGCAGAAGAGACGCAGTTATAAGAACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000532500.1
CDS GCA 72 bp GGTCAGCCAGGACGACCACTCCTGAGTTCTTATAACTaGGTCTCTTCTGCTTGTATTTGGGGTTCACACAGT +
Preference number: 6 (lower is better)
Translates to: GQPGRPLLSSYN*VSSACIWGSHS
Trigger: ACTGTGTGAACCCCAAATACAAGCAGAAGAGACGCAGTTATAAGAACTCAGGAGTGGTCGTCCTGGCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000532500.1
CDS TCA 72 bp CCTGTGGAACTTGAGGTCAGCCAGGACGACCACTCCTaGGTTCTTATAACTGCGTCTCTTCTGCTTGTATTT +
Preference number: 6 (lower is better)
Translates to: PVELEVSQDDHS*VLITASLLLVF
Trigger: AAATACAAGCAGAAGAGACGCAGTTATAAGAACTCAGGAGTGGTCGTCCTGGCTGACCTCAAGTTCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000268720.9
ENST00000319518.13
ENST00000532500.1