RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPNE6 (Homo sapiens)

Ensembl gene IDs: ENSG00000100884

Ensembl transcript IDs: ENST00000397016.6, ENST00000460657.1, ENST00000537691.5, ENST00000557829.1, ENST00000557889.1, ENST00000558450.5, ENST00000558541.5, ENST00000558795.1, ENST00000558859.5, ENST00000558995.5, ENST00000559197.5, ENST00000559207.1, ENST00000559778.5, ENST00000560092.5, ENST00000560356.5, ENST00000560761.5, ENST00000560828.5, ENST00000560845.1, ENST00000560884.5, ENST00000642203.1, ENST00000642848.1, ENST00000643170.1, ENST00000643771.1, ENST00000643959.1, ENST00000644012.1, ENST00000644346.1, ENST00000644353.1, ENST00000645219.1, ENST00000645359.1, ENST00000645593.1, ENST00000645769.1, ENST00000646373.1, ENST00000646450.1, ENST00000646867.1, ENST00000646951.1, ENST00000647071.1, ENST00000647147.1, ENST00000647537.1

Found 571 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTaGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACTG +
Preference number: 1 (lower is better)
Translates to: HHSRPEPRGHTWSKR*RHWSLESRGSGQAL
Trigger: CAGTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR CCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTaGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCA +
Preference number: 1 (lower is better)
Translates to: RSRTHHSRPEPRGHT*SKRWRHWSLESRGS
Trigger: TGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR GCA 90 bp GGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGGTGAACTCGCC +
Preference number: 1 (lower is better)
Translates to: GILGVGYLWHLLPRV*RPFLHLLESAGELA
Trigger: GGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR GCA 90 bp GGGATCTGGGTGGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTaGCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTG +
Preference number: 1 (lower is better)
Translates to: GIWVGFWGWGICGTS*PGFAVPSCISWKVL
Trigger: CAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCACCCAGATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CCA 90 bp ATCACCCTCAGGATTCTCCCAGGGATCTGGGTGGGATTCTGGGGGTaGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: ITLRILPGIWVGFWG*GICGTSCPGFAVPS
Trigger: GGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCACCCAGATCCCTGGGAGAATCCTGAGGGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CCA 90 bp TTCAGCATCACCCTCAGGATTCTCCCAGGGATCTGGGTGGGATTCTaGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTC +
Preference number: 1 (lower is better)
Translates to: FSITLRILPGIWVGF*GWGICGTSCPGFAV
Trigger: GACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCACCCAGATCCCTGGGAGAATCCTGAGGGTGATGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR TCA 90 bp AGCAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTaGGCCCAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGG +
Preference number: 1 (lower is better)
Translates to: SRASQSKTPMVPSFS*AQVLSTLSTSYHLW
Trigger: CCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR GCA 90 bp CCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAGGTaGTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: PRARPPWFRPSAEPR*FPPSPLPITYGGLF
Trigger: GAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CCA 90 bp CCAAGGAAGTCACTGAGGGGCCACAGCATTGAAGGGTATGGGGTTTaGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGG +
Preference number: 1 (lower is better)
Translates to: PRKSLRGHSIEGYGV*RDRSRTHHSRPEPR
Trigger: CCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAATGCTGTGGCCCCTCAGTGACTTCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR TCA 90 bp CACCATAGGTGTCCATGCAGGGGCATTGAATACCTGGACCAAGGGTaGGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCA +
Preference number: 1 (lower is better)
Translates to: HHRCPCRGIEYLDQG*VQVILPTVMVDLPA
Trigger: TGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGGTCCAGGTATTCAATGCCCCTGCATGGACACCTATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR TCA 90 bp CAGCTTGTAGGCTCTGAAGGTGAGTTGCACATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGATCTGCAAGGGGGATACAAGTGGCAG +
Preference number: 1 (lower is better)
Translates to: QLVGSEGELHIVVCA*YLLGHDLQGGYKWQ
Trigger: CTGCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGAGGTATCAGGCACAAACGACTATGTGCAACTCACCTTCAGAGCCTACAAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCCAGGCACTGAGAGGCTaGGGGAGTGTCGGTCCGGAG +
Preference number: 2 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTQALRG*GSVGPE
Trigger: CTCCGGACCGACACTCCCTCAGCCTCTCAGTGCCTG...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR TCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGCAGGCACTGAGAGGCTaGGGGAGTGTCGGTCCGGAG +
Preference number: 2 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEQALRG*GSVGPE
Trigger: CTCCGGACCGACACTCCCTCAGCCTCTCAGTGCCTG...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR TCA 90 bp CAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCAGGCACTGAGAGGCTaGGGGAGTGTCGGTCCGGAG +
Preference number: 2 (lower is better)
Translates to: QNPGGTPGPRGGGIGHWSQALRG*GSVGPE
Trigger: CTCCGGACCGACACTCCCTCAGCCTCTCAGTGCCTG...ACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CCA 90 bp CAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAGGTGGGGTGGGGTATTTGTaGCACCTCCTGCCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: QSLPEQDPHGSVLQLSPGGVGYL*HLLPRV
Trigger: AACCCTGGGCAGGAGGTGCCACAAATACCCCACCCC...ACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CAA 90 bp CAGGATTCTCCCAGGGATCTGGGTGGGATTCTGGGGGTGGGGTATTaGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTC +
Preference number: 2 (lower is better)
Translates to: QDSPRDLGGILGVGY*WHLLPRVCRPFLHL
Trigger: GAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCACCCAGATCCCTGGGAGAATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp TGGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCGGGTGGTCCTGGGCATaGTGTCACCATAGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: WDSGGGVFVAPPAQGLPSGWSWA*CHHRCP
Trigger: TGGACACCTATGGTGACATCATGCCCAGGACCACCC...GGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR GCA 90 bp CAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAGGTATTTGTGGCACCTCCTaGCCAGGGTTTGCCGTCCCT +
Preference number: 2 (lower is better)
Translates to: QSLPEQDPHGSVLQLSPGICGTS*PGFAVP
Trigger: AGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAAT...ACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGAGGCATTGGTCACTaGAGTCACGAGGGTCAGGAC +
Preference number: 2 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPGGIGH*SHEGQD
Trigger: GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCC...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CCA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCGGAGGCATTGGTCACTaGAGTCACGAGGGTCAGGAC +
Preference number: 2 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTGGIGH*SHEGQD
Trigger: GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCC...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGAAGAGGTGGAGGCATTaGTCACTGGAGTCACGAGGG +
Preference number: 2 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWKRWRH*SLESRG
Trigger: CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTT...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CCA 90 bp CCAAGGGTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTCATTTCGGGGGCTGGTaGCTCCGTCCTCGGCATCGA +
Preference number: 2 (lower is better)
Translates to: PRVSTGDLAYRDGGLARSHFGGW*LRPRHR
Trigger: TCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATG...ACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp TGGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCTACCTGGACCAAGGGTaGGTACAGGTGATCTTGCCT +
Preference number: 2 (lower is better)
Translates to: WDSGGGVFVAPPAQGLPSYLDQG*VQVILP
Trigger: AGGCAAGATCACCTGTACTCACCCTTGGTCCAGGTA...GGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp TGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTTCCATGCAGGGGCATTaGATACCTGGACCAAGGGTG +
Preference number: 2 (lower is better)
Translates to: WHLLPRVCRPFLHLLESASMQGH*IPGPRV
Trigger: CACCCTTGGTCCAGGTATTCAATGCCCCTGCATGGA...AGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp CAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAGGTCCTTCCTGCATCTCCTaGAAAGTGCTGGTGAACTCG +
Preference number: 2 (lower is better)
Translates to: QSLPEQDPHGSVLQLSPGPSCIS*KVLVNS
Trigger: CGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGG...ACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR GCA 90 bp CAGCAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCACACCATAGGTGTCCATaGAGGGGCATTGAATACCTG +
Preference number: 2 (lower is better)
Translates to: QQSLPEQDPHGSVLQLSPHHRCP*RGIEYL
Trigger: CAGGTATTCAATGCCCCTGCATGGACACCTATGGTG...TGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR GCA 90 bp TTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCCACCATAGGTGTCCATaGAGGGGCATTGAATACCTG +
Preference number: 2 (lower is better)
Translates to: FWGWGICGTSCPGFAVPSHHRCP*RGIEYL
Trigger: CAGGTATTCAATGCCCCTGCATGGACACCTATGGTG...GGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR GCA 90 bp TGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGCACATAGTCGTTTGTaGCTGATACCTCCTCGGCCA +
Preference number: 2 (lower is better)
Translates to: WHLLPRVCRPFLHLLESAAHSRL*LIPPRP
Trigger: TGGCCGAGGAGGTATCAGGCACAAACGACTATGTGC...AGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp GTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTCTTCCCTCGGCATCGAACACGTaGAACTGCAGGGGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: VSTGDLAYRDGGLARSLPSASNT*NCRGCF
Trigger: GAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGA...GGGAAGACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCTATCATTTCGGGGGCTaGTGGCTCCGTCCTCGGCAT +
Preference number: 2 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFYHFGG*WLRPRH
Trigger: ATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATA...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp TGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGGGGGCATTGAATACCTaGACCAAGGGTGAGTACAGG +
Preference number: 2 (lower is better)
Translates to: CGTSCPGFAVPSCISWKVGALNT*TKGEYR
Trigger: CCTGTACTCACCCTTGGTCCAGGTATTCAATGCCCC...CACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCGTGGGATTCTGGGGGTaGGGTATTTGTGGCACCTCC +
Preference number: 2 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFVGFWG*GICGTS
Trigger: GGAGGTGCCACAAATACCCCACCCCCAGAATCCCAC...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp TGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCATACACCAGGAACTTaGGAGGTCGGTGAACATCAC +
Preference number: 2 (lower is better)
Translates to: CGTSCPGFAVPSCISWKVHTPGT*EVGEHH
Trigger: GTGATGTTCACCGACCTCTCAAGTTCCTGGTGTATG...CACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAACCTGGTCCAAGAGGTaGAGGCATTGGTCACTGGAG +
Preference number: 2 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPTWSKR*RHWSLE
Trigger: CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGT...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CCA 90 bp CAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATCATTTCGGGGGCTGGTaGCTCCGTCCTCGGCATCGA +
Preference number: 2 (lower is better)
Translates to: QVLSTLSTSYHLWWSLQHHFGGW*LRPRHR
Trigger: TCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATG...ATGCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp CCCAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCTATCATTTCGGGGGCTaGTGGCTCCGTCCTCGGCAT +
Preference number: 2 (lower is better)
Translates to: PRCFPPSPLPITYGGLFSYHFGG*WLRPRH
Trigger: ATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATA...GCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp TGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGTTTGTGACACAATCTaGCCCAAGGTGCACTCCGTA +
Preference number: 2 (lower is better)
Translates to: WHLLPRVCRPFLHLLESAVCDTI*PKVHSV
Trigger: TACGGAGTGCACCTTGGGCCAGATTGTGTCACAAAC...AGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp CAGCAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCATCCTATCACCTATGGTaGTCTCTTCAGCATCACCCT +
Preference number: 2 (lower is better)
Translates to: QQSLPEQDPHGSVLQLSPSYHLW*SLQHHP
Trigger: AGGGTGATGCTGAAGAGACCACCATAGGTGATAGGA...TGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCAGAGCAAGACCCCCATaGTTCCGTCCTTCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFRARPP*FRPSAE
Trigger: CTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCT...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR GCA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCTTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFFAVPS*ISWKVL
Trigger: CAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAA...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp GGTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTGGGTGGTCCTGGGCATaGTGTCACCATAGGTGTCCA +
Preference number: 2 (lower is better)
Translates to: GCSSPPQFSRPADHFGPRGWSWA*CHHRCP
Trigger: TGGACACCTATGGTGACATCATGCCCAGGACCACCC...ACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp CCCAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGAT +
Preference number: 2 (lower is better)
Translates to: PRCFPPSPLPITYGGLFSIVVCA*YLLGHD
Trigger: ATCGTGGCCGAGGAGGTATCAGGCACAAACGACTAT...GCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR GCA 90 bp CAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATTCCTCGGCCACGATCTaGAAGGGGGATACAAGTGGC +
Preference number: 2 (lower is better)
Translates to: QVLSTLSTSYHLWWSLQHSSATI*KGDTSG
Trigger: GCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGA...ATGCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp GGTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTACCTGGACCAAGGGTaGGTACAGGTGATCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GCSSPPQFSRPADHFGPRYLDQG*VQVILP
Trigger: AGGCAAGATCACCTGTACTCACCCTTGGTCCAGGTA...ACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR GCA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTTCGAACACGTGGAACTaGAGGGGCTGCTTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVSNTWN*RGCFSS
Trigger: TGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGA...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCAGTCATGCTTCCCACTaGAGTCATAGTCATACACCA +
Preference number: 2 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFSHASH*SHSHTP
Trigger: TGGTGTATGACTATGACTCCAGTGGGAAGCATGACT...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp CAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATAGTGACCTTGGTTTGTaGCACAATCTGGCCCAAGGT +
Preference number: 2 (lower is better)
Translates to: QVLSTLSTSYHLWWSLQHSDLGL*HNLAQG
Trigger: ACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACT...ATGCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGGGCATTGAATACCTaGACCAAGGGTGAGTACAGG +
Preference number: 2 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVGALNT*TKGEYR
Trigger: CCTGTACTCACCCTTGGTCCAGGTATTCAATGCCCC...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp CAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATCCATGCAGGGGCATTaGATACCTGGACCAAGGGTG +
Preference number: 2 (lower is better)
Translates to: QFSRPADHFGPRWSYRFPSMQGH*IPGPRV
Trigger: CACCCTTGGTCCAGGTATTCAATGCCCCTGCATGGA...TGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR GCA 90 bp CAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATCGAACACGTGGAACTaGAGGGGCTGCTTCTCCTCA +
Preference number: 2 (lower is better)
Translates to: QFSRPADHFGPRWSYRFPSNTWN*RGCFSS
Trigger: TGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGA...TGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGGGAGGCATTGGTCACTaGAGTCACGAGGGTCAGGAC +
Preference number: 2 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGGGIGH*SHEGQD
Trigger: GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCC...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CCA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGTTTGTGACACAATCTaGCCCAAGGTGCACTCCGTA +
Preference number: 2 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVVCDTI*PKVHSV
Trigger: TACGGAGTGCACCTTGGGCCAGATTGTGTCACAAAC...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CCA 90 bp TCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATGAACAAGGGGGATACAAGTaGCAGGACTCCCCTAACCTT +
Preference number: 2 (lower is better)
Translates to: SPDQLITLVLVGLIDFHEQGGYK*QDSPNL
Trigger: AAGGTTAGGGGAGTCCTGCCACTTGTATCCCCCTTG...TTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CAA 90 bp CAGGTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATAGATTTCCATGAAAGGGTCAGACTT +
Preference number: 2 (lower is better)
Translates to: QVVLHHLSSPDQLIT*VLVGLIDFHERVRL
Trigger: AAGTCTGACCCTTTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR TCA 90 bp TCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATGAAAGTGACCTTGGTTTGTaGCACAATCTGGCCCAAGGT +
Preference number: 2 (lower is better)
Translates to: SPDQLITLVLVGLIDFHESDLGL*HNLAQG
Trigger: ACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACT...TTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CCA 72 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTaGTCACTGGAGTCACGAGGGTCAGGACAGGCACTG +
Preference number: 3 (lower is better)
Translates to: PRGHTWSKRWRH*SLESRGSGQAL
Trigger: CAGTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR GCA 72 bp GTGGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTaGCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGG +
Preference number: 3 (lower is better)
Translates to: VGFWGWGICGTS*PGFAVPSCISW
Trigger: CCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CCA 72 bp CGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTaGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGA +
Preference number: 3 (lower is better)
Translates to: RPEPRGHTWSKR*RHWSLESRGSG
Trigger: TCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR CCA 72 bp ACCCTCAGGATTCTCCCAGGGATCTGGGTGGGATTCTaGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: TLRILPGIWVGF*GWGICGTSCPG
Trigger: CCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCACCCAGATCCCTGGGAGAATCCTGAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp CAGCAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAACCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTC +
Preference number: 3 (lower is better)
Translates to: QQSLPEQDPHGSVLQLSPTVMVD*PAVFPF
Trigger: GAATGGGAAGACTGCGGGCAAGTCCACCATCACGGT...TGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCCTGGGGGTGGGGTATTaGTGGCACCTCCTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFLGVGY*WHLLPR
Trigger: CCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAG...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR GCA 72 bp TGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTGGTGAACTCGCCGATG +
Preference number: 3 (lower is better)
Translates to: CGTSCPGFAVPS*ISWKVLVNSPM
Trigger: CATCGGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR GCA 72 bp GGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGGT +
Preference number: 3 (lower is better)
Translates to: GVGYLWHLLPRV*RPFLHLLESAG
Trigger: ACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CCA 72 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTaGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCA +
Preference number: 3 (lower is better)
Translates to: THHSRPEPRGHT*SKRWRHWSLES
Trigger: TGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR CCA 72 bp TACCTCCTCGGCCACGATCTGCAAGGGGGATACAAGTaGCAGGACTCCCCTAACCTTACCACAAGGGCCACC +
Preference number: 3 (lower is better)
Translates to: YLLGHDLQGGYK*QDSPNLTTRAT
Trigger: GGTGGCCCTTGTGGTAAGGTTAGGGGAGTCCTGCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGAGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp CCCAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCCCTCCTGCCCAGGGTTaGCCGTCCCTTCCTGCATCT +
Preference number: 3 (lower is better)
Translates to: PRCFPPSPLPITYGGLFSPPAQG*PSLPAS
Trigger: AGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGG...GCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCACAAGAGGTGGAGGCATaGGTCACTGGAGTCACGAGG +
Preference number: 3 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPQEVEA*VTGVTR
Trigger: CCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTG...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CAA 90 bp AAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCAAGAGGTGGAGGCATaGGTCACTGGAGTCACGAGG +
Preference number: 3 (lower is better)
Translates to: KGMGFGEIGAGPTTHVQNQEVEA*VTGVTR
Trigger: CCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTG...GTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CAA 90 bp TGGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATA +
Preference number: 3 (lower is better)
Translates to: WDSGGGVFVAPPAQGLPSDQLIT*VLVGLI
Trigger: TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTC...GGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR GCA 72 bp AGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAGGTaGTTTCCACCCTCTCCACTTCCTATCACCTATGGT +
Preference number: 3 (lower is better)
Translates to: RPPWFRPSAEPR*FPPSPLPITYG
Trigger: ACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CCA 72 bp TCACTGAGGGGCCACAGCATTGAAGGGTATGGGGTTTaGAGAGATAGGAGCAGGACCCACCACTCACGTCCA +
Preference number: 3 (lower is better)
Translates to: SLRGHSIEGYGV*RDRSRTHHSRP
Trigger: TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAATGCTGTGGCCCCTCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR-3UTR CAA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCGGCTCTGAAGGTGAGTaGCACATAGTCGTTTGTGCC +
Preference number: 3 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFGSEGE*HIVVCA
Trigger: GGCACAAACGACTATGTGCAACTCACCTTCAGAGCC...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp AGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGGTGAACTCGCCGATGGCTCTGAAGGTGAGTaGCACATAGTCGTTTGTGCC +
Preference number: 3 (lower is better)
Translates to: RVCRPFLHLLESAGELADGSEGE*HIVVCA
Trigger: GGCACAAACGACTATGTGCAACTCACCTTCAGAGCC...ATCGGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp CAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAGGTATGAAAGGGTCAGACTaGCTGAACAGATCCTTGTTG +
Preference number: 3 (lower is better)
Translates to: QSLPEQDPHGSVLQLSPGMKGSD*LNRSLL
Trigger: CAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCAT...ACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR TCA 72 bp GGCTCTGAAGGTGAGTTGCACATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGATCTGCAAGGGGGATAC +
Preference number: 3 (lower is better)
Translates to: GSEGELHIVVCA*YLLGHDLQGGY
Trigger: GTATCCCCCTTGCAGATCGTGGCCGAGGAGGTATCAGGCACAAACGACTATGTGCAACTCACCTTCAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR TCA 72 bp TGTCCATGCAGGGGCATTGAATACCTGGACCAAGGGTaGGTACAGGTGATCTTGCCTACCGTGATGGTGGAC +
Preference number: 3 (lower is better)
Translates to: CPCRGIEYLDQG*VQVILPTVMVD
Trigger: GTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGGTCCAGGTATTCAATGCCCCTGCATGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp GAACAGATCCTTGTTGTCCAGCTTGTAGGCTCTGAAGGTGAGTTGCACATAGTCACCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTC +
Preference number: 3 (lower is better)
Translates to: EQILVVQLVGSEGELHIVTVMVD*PAVFPF
Trigger: GAATGGGAAGACTGCGGGCAAGTCCACCATCACGGT...GACTATGTGCAACTCACCTTCAGAGCCTACAAGCTGGACAACAAGGATCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp CCCAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGG +
Preference number: 3 (lower is better)
Translates to: PRCFPPSPLPITYGGLFSNGLVT*VCDTIW
Trigger: CCAGATTGTGTCACAAACCAAGGTCACTAAGCCATT...GCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGTTGCACATAGTCGTTaGTGCCTGATACCTCCTCGG +
Preference number: 3 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVVAHSR*CLIPPR
Trigger: CCGAGGAGGTATCAGGCACAAACGACTATGTGCAAC...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR-3UTR CAA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTATGAAAGGGTCAGACTaGCTGAACAGATCCTTGTTG +
Preference number: 3 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVMKGSD*LNRSLL
Trigger: CAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCAT...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGGCTTGGCCGGTGCTCTaGTCCCGCTGGGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKAWPVL*SRWAGS
Trigger: TGAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGC...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGGCTTGGCCGGTGCTCTaGTCCCGCTGGGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTAWPVL*SRWAGS
Trigger: TGAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGC...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGCTTGGCCGGTGCTCTaGTCCCGCTGGGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRAWPVL*SRWAGS
Trigger: TGAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGC...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGTGCTCTGCTCCCGCTaGGCCGGCTCAGCCACACGG +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEVLCSR*AGSATR
Trigger: CCGTGTGGCTGAGCCGGCCCAGCGGGAGCAGAGCAC...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCGTGCTCTGCTCCCGCTaGGCCGGCTCAGCCACACGG +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVVLCSR*AGSATR
Trigger: CCGTGTGGCTGAGCCGGCCCAGCGGGAGCAGAGCAC...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGGTGCTCTGCTCCCGCTaGGCCGGCTCAGCCACACGG +
Preference number: 4 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGVLCSR*AGSATR
Trigger: CCGTGTGGCTGAGCCGGCCCAGCGGGAGCAGAGCAC...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTTGGGCTGTCGGGGACTaGGGCAGTGCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GGTPGPRGGGIGHWSHEGWAVGD*GSAGTG
Trigger: GCCAGTCCCTGCACTGCCTCAGTCCCCGACAGCCCA...ACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACGCTTGGCCGGTGCTCTaGTCCCGCTGGGCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHAWPVL*SRWAGS
Trigger: TGAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGC...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACTCGTGGCTTGGCCGGTaGTCTGCTCCCGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHSWLGR*SAPAGP
Trigger: CGGCCCAGCGGGAGCAGAGCACCGGCCAAGCCACGA...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGAGGCCCCCAGCGTCATaGTTGGGGGCTCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHERPPAS*LGAQAP
Trigger: GGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCT...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGCCCCCAGCGTCATaGTTGGGGGCTCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVRPPAS*LGAQAP
Trigger: GGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCT...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTAGGCCCCCAGCGTCATaGTTGGGGGCTCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPRPPAS*LGAQAP
Trigger: GGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCT...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GCCCAAGGTGCACTCCGTAGAGCCGAGGAAGGTATCATTTCGGGGGCTGGTGGCCGGTCCAGGAGGCCATaGCAGGACACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AQGALRRAEEGIISGAGGRSRRP*QDTRSS
Trigger: GGAGCTGCGGGTGTCCTGCCATGGCCTCCTGGACCG...GCCACCAGCCCCCGAAATGATACCTTCCTCGGCTCTACGGAGTGCACCTTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATCGGTCCAGGAGGCCATaGCAGGACACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHRSRRP*QDTRSS
Trigger: GGAGCTGCGGGTGTCCTGCCATGGCCTCCTGGACCG...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCTCATTTCGGGGGCTGGTaGCTCCGTCCTCGGCATCGA +
Preference number: 4 (lower is better)
Translates to: FGGWWLRPRHRTRGTAGAHFGGW*LRPRHR
Trigger: TCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATG...AGCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGTGCTCTGCTCCCGCTaGGCCGGCTCAGCCACACGG +
Preference number: 4 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTVLCSR*AGSATR
Trigger: CCGTGTGGCTGAGCCGGCCCAGCGGGAGCAGAGCAC...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATCCTCGGCCACGATCGTaGTGGTGGACTTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHPRPRS*WWTCPQ
Trigger: CTGCGGGCAAGTCCACCATCACGATCGTGGCCGAGG...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGCCTCGGCCACGATCGTaGTGGTGGACTTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGPRPRS*WWTCPQ
Trigger: CTGCGGGCAAGTCCACCATCACGATCGTGGCCGAGG...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCTCGGCCACGATCGTaGTGGTGGACTTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGPRPRS*WWTCPQ
Trigger: CTGCGGGCAAGTCCACCATCACGATCGTGGCCGAGG...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACTGGGCTGTCGGGGACTaGGGCAGTGCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHWAVGD*GSAGTG
Trigger: GCCAGTCCCTGCACTGCCTCAGTCCCCGACAGCCCA...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGCAGGCACTGAGAGGCTaGGGGAGTGTCGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWQALRG*GSVGPE
Trigger: CTCCGGACCGACACTCCCTCAGCCTCTCAGTGCCTG...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGCACTGAGAGGCTaGGGGAGTGTCGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: GGTPGPRGGGIGHWSHEGQALRG*GSVGPE
Trigger: CTCCGGACCGACACTCCCTCAGCCTCTCAGTGCCTG...ACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACTCGTGGCTTGGCCGGTaGTCTGCTCCCGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDSWLGR*SAPAGP
Trigger: CGGCCCAGCGGGAGCAGAGCACCGGCCAAGCCACGA...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGGACAATGTCTCGGGCTaGAGGCACCCCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEDNVSG*RHPSGA
Trigger: TGCCCCCGAGGGGTGCCTGCAGCCCGAGACATTGTC...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGACAATGTCTCGGGCTaGAGGCACCCCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPDNVSG*RHPSGA
Trigger: TGCCCCCGAGGGGTGCCTGCAGCCCGAGACATTGTC...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCGGTCCAGGAGGCCATaGCAGGACACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QNPGGTPGPRGGGIGHWSRSRRP*QDTRSS
Trigger: GGAGCTGCGGGTGTCCTGCCATGGCCTCCTGGACCG...ACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTTCGGGGGCTGGTaGCTCCGTCCTCGGCATCGA +
Preference number: 4 (lower is better)
Translates to: THHSRPEPRGHTWSKRWRHFGGW*LRPRHR
Trigger: TCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATG...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCAGGCAGTGCAGGGACTaGCTGCTCCTCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTRQCRD*LLLGSP
Trigger: TGGGGACCCGAGGAGCAGCCAGTCCCTGCACTGCCT...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTAGGCAGTGCAGGGACTaGCTGCTCCTCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGRQCRD*LLLGSP
Trigger: TGGGGACCCGAGGAGCAGCCAGTCCCTGCACTGCCT...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGAGGCAGTGCAGGGACTaGCTGCTCCTCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHERQCRD*LLLGSP
Trigger: TGGGGACCCGAGGAGCAGCCAGTCCCTGCACTGCCT...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGGAGTACTTCGTGGCTTaGCCGGTGCTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: THHSRPEPRGHTWSKRWREYFVA*PVLCSR
Trigger: GCGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTC...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGGAGTACTTCGTGGCTTaGCCGGTGCTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKEYFVA*PVLCSR
Trigger: GCGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTC...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCAGAGTACTTCGTGGCTTaGCCGGTGCTCTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PPLTSRTQGAHLVQEVEAEYFVA*PVLCSR
Trigger: GCGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTC...TGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGCCCAGGGGGCACACCTaGTCCAAGAGGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRPRGHT*SKRWRH
Trigger: ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGCATCAGAGTAGAGCTTaGGCAGCACGCAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRHQSRA*AARRGG
Trigger: CCCACCCCTGCGTGCTGCTCAAGCTCTACTCTGATG...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACCCTCGGCCACGATCGTaGTGGTGGACTTGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHPRPRS*WWTCPQ
Trigger: CTGCGGGCAAGTCCACCATCACGATCGTGGCCGAGG...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp TTTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCGGGTGGTCCTGGGCATaGTGTCACCATAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: FRGLVAPSSASNTWNCRGGWSWA*CHHRCP
Trigger: TGGACACCTATGGTGACATCATGCCCAGGACCACCC...GCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp CCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCACAGCTGCATAGGGAATaGAGGGACAGGCGGAACGGC +
Preference number: 4 (lower is better)
Translates to: PPLTSRTQGAHLVQEVEAQLHRE*RDRRNG
Trigger: GCCGTTCCGCCTGTCCCTGCATTCCCTATGCAGCTG...TGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCTGCTTCTCCTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: AGGSVLGIEHVELQGLLLLLPRV*RPFLHL
Trigger: GAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAG...GAGAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATGCACCTTCTCCACCGTaGACTGGGCCAGCACTACCG +
Preference number: 4 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHAPSPP*TGPALP
Trigger: CGGTAGTGCTGGCCCAGTGCACGGTGGAGAAGGTGC...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGCACCTTCTCCACCGTaGACTGGGCCAGCACTACCG +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRAPSPP*TGPALP
Trigger: CGGTAGTGCTGGCCCAGTGCACGGTGGAGAAGGTGC...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGGCACCTTCTCCACCGTaGACTGGGCCAGCACTACCG +
Preference number: 4 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWAPSPP*TGPALP
Trigger: CGGTAGTGCTGGCCCAGTGCACGGTGGAGAAGGTGC...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGAGTGCAGGGACTGGCTaGTCCTCGGGTCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHESAGTG*SSGPHW
Trigger: CCAATGGGGACCCGAGGAGCAGCCAGTCCCTGCACT...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTCATTTCGGGGGCTGGTaGCTCCGTCCTCGGCATCGA +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPHFGGW*LRPRHR
Trigger: TCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATG...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGTTCTCCACCGTGCACTaGGCCAGCACTACCGTCCCT +
Preference number: 4 (lower is better)
Translates to: THHSRPEPRGHTWSKRWRFSTVH*ASTTVP
Trigger: AGGGACGGTAGTGCTGGCCCAGTGCACGGTGGAGAA...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTCAGCCAGGACACACTTaGCGAGTGCAGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPQPGHT*RVQRGQ
Trigger: CTGCCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTG...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGACCCAGGGGGCACACCTaGTCCAAGAGGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRPRGHT*SKRWRH
Trigger: ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATCCCAGGGGGCACACCTaGTCCAAGAGGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHPRGHT*SKRWRH
Trigger: ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCTATTCTCCCAGGGATCTaGGTGGGATTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FGGWWLRPRHRTRGTAGAILPGI*VGFWGW
Trigger: CCACCCCCAGAATCCCACCCAGATCCCTGGGAGAAT...AGCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCATGGGCTGTCGGGGACTaGGGCAGTGCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPWAVGD*GSAGTG
Trigger: GCCAGTCCCTGCACTGCCTCAGTCCCCGACAGCCCA...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGGACGGTAGGAGGCGATaGCCCCTGAGATCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKDGRRR*PLRSLH
Trigger: GTGAAGAGATCTCAGGGGTCATCGCCTCCTACCGTC...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTTCACCACACCGTCAGTaGGCACCAGCAGCACCGAGT +
Preference number: 4 (lower is better)
Translates to: GGTPGPRGGGIGHWSHEGSPHRQ*APAAPS
Trigger: ACTCGGTGCTGCTGGTGCTCACTGACGGTGTGGTGA...ACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGAGGGGGCAGCATCCTTaGAGTCTCGGAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGRGQHP*SLGRAR
Trigger: TCGTGCCCTTCCGAGACTTCAAGGATGCTGCCCCCT...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGAGGGGGCAGCATCCTTaGAGTCTCGGAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWRGQHP*SLGRAR
Trigger: TCGTGCCCTTCCGAGACTTCAAGGATGCTGCCCCCT...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGAGGGGGCAGCATCCTTaGAGTCTCGGAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLERGQHP*SLGRAR
Trigger: TCGTGCCCTTCCGAGACTTCAAGGATGCTGCCCCCT...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATAGGGGGCAGCATCCTTaGAGTCTCGGAAGGGCACGA +
Preference number: 4 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHRGQHP*SLGRAR
Trigger: TCGTGCCCTTCCGAGACTTCAAGGATGCTGCCCCCT...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGGAGGGGCCACAGCATTaGAGGGTATGGGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKREGPQH*RVWGLE
Trigger: CTCCAAACCCCATACCCTTCAATGCTGTGGCCCCTC...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGGAGGGGCCACAGCATTaGAGGGTATGGGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKEGPQH*RVWGLE
Trigger: CTCCAAACCCCATACCCTTCAATGCTGTGGCCCCTC...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCTGCTTCTCGGGTGGTCCTGGGCATaGTGTCACCATAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AGGSVLGIEHVELQGLLLGWSWA*CHHRCP
Trigger: TGGACACCTATGGTGACATCATGCCCAGGACCACCC...GAGAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGCAGCTGCATAGGGAATaGAGGGACAGGCGGAACGGC +
Preference number: 4 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWQLHRE*RDRRNG
Trigger: GCCGTTCCGCCTGTCCCTGCATTCCCTATGCAGCTG...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGCTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWLLPRV*RPFLHL
Trigger: GAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAG...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGCTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGLLPRV*RPFLHL
Trigger: GAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAG...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGCTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTLLPRV*RPFLHL
Trigger: GAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAG...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTTCCCACTGCATCTCCTaGCCAGGGTTTGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GGTPGPRGGGIGHWSHEGSHCIS*PGFAVP
Trigger: AGGGACGGCAAACCCTGGGCAGGAGATGCAGTGGGA...ACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCCCACTGCATCTCCTaGCCAGGGTTTGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLESHCIS*PGFAVP
Trigger: AGGGACGGCAAACCCTGGGCAGGAGATGCAGTGGGA...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCCCACTGCATCTCCTaGCCAGGGTTTGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGSHCIS*PGFAVP
Trigger: AGGGACGGCAAACCCTGGGCAGGAGATGCAGTGGGA...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGATCCCACTGCATCTCCTaGCCAGGGTTTGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRSHCIS*PGFAVP
Trigger: AGGGACGGCAAACCCTGGGCAGGAGATGCAGTGGGA...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTAGTGCAGGGACTGGCTaGTCCTCGGGTCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTSAGTG*SSGPHW
Trigger: CCAATGGGGACCCGAGGAGCAGCCAGTCCCTGCACT...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGACATAGTCCTGGCAGATaGCTCCCACTGCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRHSPGR*LPLHAG
Trigger: CCCTGCGTGCAGTGGGAGGCATCTGCCAGGACTATG...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGCATAGTCCTGGCAGATaGCTCCCACTGCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTHSPGR*LPLHAG
Trigger: CCCTGCGTGCAGTGGGAGGCATCTGCCAGGACTATG...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCTTCAGCTGAGCCCAGGTaGTTTCCACCCTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: FGGWWLRPRHRTRGTAGASAEPR*FPPSPL
Trigger: AAGTGGAGAGGGTGGAAAGCACCTGGGCTCAGCTGA...AGCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCAGGCCCCCAGCGTCATaGTTGGGGGCTCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFRPPAS*LGAQAP
Trigger: GGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCT...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp TTTGTGCCTGATACCTCCTCGGCCACGATCTGCAAGGGGGATACAAGTGGCAGGAGGCCCCCAGCGTCATaGTTGGGGGCTCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: FVPDTSSATICKGDTSGRRPPAS*LGAQAP
Trigger: GGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCT...CCTGCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGAGGTATCAGGCACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTAGCAGCACGCAGGGGTaGGGTTTGGTGAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPSSTQG*GLVSVS
Trigger: GGACACACTCACCAAACCCCACCCCTGCGTGCTGCT...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGAGCAGCACGCAGGGGTaGGGTTTGGTGAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHESSTQG*GLVSVS
Trigger: GGACACACTCACCAAACCCCACCCCTGCGTGCTGCT...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCAGCAGCACGCAGGGGTaGGGTTTGGTGAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: FWGWGICGTSCPGFAVPSSSTQG*GLVSVS
Trigger: GGACACACTCACCAAACCCCACCCCTGCGTGCTGCT...GGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGCAGCACGCAGGGGTaGGGTTTGGTGAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVSSTQG*GLVSVS
Trigger: GGACACACTCACCAAACCCCACCCCTGCGTGCTGCT...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGAGCAGCACGCAGGGGTaGGGTTTGGTGAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLESSTQG*GLVSVS
Trigger: GGACACACTCACCAAACCCCACCCCTGCGTGCTGCT...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGGGGAGAAGACAGGGCTaGAACAGGAGCGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKGRRQG*NRSEAP
Trigger: AGGTGCTTCGCTCCTGTTCCAGCCCTGTCTTCTCCC...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATCGGCATCGAACACGTaGAACTGCAGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PPLTSRTQGAHLVQEVEASASNT*NCRGCF
Trigger: GAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGA...TGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGTCGGCATCGAACACGTaGAACTGCAGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKSASNT*NCRGCF
Trigger: GAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGA...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATATCATTTCGGGGGCTaGTGGCTCCGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PPLTSRTQGAHLVQEVEAYHFGG*WLRPRH
Trigger: ATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATA...TGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTTCTCCACCGTGCACTaGGCCAGCACTACCGTCCCT +
Preference number: 4 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWFSTVH*ASTTVP
Trigger: AGGGACGGTAGTGCTGGCCCAGTGCACGGTGGAGAA...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCGCACCGAGTACTTCGTaGCTTGGCCGGTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVAPSTS*LGRCSA
Trigger: AGCAGAGCACCGGCCAAGCCACGAAGTACTCGGTGC...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCCAGCCAGGACACACTTaGCGAGTGCAGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RTQGAHLVQEVEALVTGVQPGHT*RVQRGQ
Trigger: CTGCCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTG...GACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACCAGCCAGGACACACTTaGCGAGTGCAGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHQPGHT*RVQRGQ
Trigger: CTGCCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTG...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTCAGCCAGGACACACTTaGCGAGTGCAGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTQPGHT*RVQRGQ
Trigger: CTGCCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTG...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGGGAGGCATTGGTCACTaGAGTCACGAGGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKGGIGH*SHEGQD
Trigger: GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCC...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCCCCAGGGGGCACACCTaGTCCAAGAGGTGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RTQGAHLVQEVEALVTGVPRGHT*SKRWRH
Trigger: ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG...GACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAGGTTCCCAGGGATCTGGGTaGGATTCTGGGGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: QSLPEQDPHGSVLQLSPGSQGSG*DSGGGV
Trigger: TACCCCACCCCCAGAATCCCACCCAGATCCCTGGGA...ACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp TTTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCAGAGCAAGACCCCCATaGTTCCGTCCTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FRGLVAPSSASNTWNCRGRARPP*FRPSAE
Trigger: CTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCT...GCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CAA 72 bp GGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTaGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGVFVAPPAQG*PSLPASPGKCW
Trigger: CCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp TTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCTATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: FGGWWLRPRHRTRGTAGAIVVCA*YLLGHD
Trigger: ATCGTGGCCGAGGAGGTATCAGGCACAAACGACTAT...AGCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAATGGGCTGTCGGGGACTaGGGCAGTGCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEWAVGD*GSAGTG
Trigger: GCCAGTCCCTGCACTGCCTCAGTCCCCGACAGCCCA...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGGGAGGCGATGACCCCTaGGATCTCTTCACATTCAGG +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKGGDDP*DLFTFR
Trigger: CCTGAATGTGAAGAGATCTCAGGGGTCATCGCCTCC...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCGACGGTAGGAGGCGATaGCCCCTGAGATCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVDGRRR*PLRSLH
Trigger: GTGAAGAGATCTCAGGGGTCATCGCCTCCTACCGTC...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATGACGGTAGGAGGCGATaGCCCCTGAGATCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHDGRRR*PLRSLH
Trigger: GTGAAGAGATCTCAGGGGTCATCGCCTCCTACCGTC...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTTCACCACACCGTCAGTaGGCACCAGCAGCACCGAGT +
Preference number: 4 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTSPHRQ*APAAPS
Trigger: ACTCGGTGCTGCTGGTGCTCACTGACGGTGTGGTGA...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTTCACCACACCGTCAGTaGGCACCAGCAGCACCGAGT +
Preference number: 4 (lower is better)
Translates to: QNPGGTPGPRGGGIGHWSSPHRQ*APAAPS
Trigger: ACTCGGTGCTGCTGGTGCTCACTGACGGTGTGGTGA...ACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTAGCGAAGCACCTCTGTaGGCTCTACCTCCACCCACT +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPSEAPL*ALPPPT
Trigger: AGTGGGTGGAGGTAGAGCGCACAGAGGTGCTTCGCT...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGTCGAACACGTGGAACTaGAGGGGCTGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKSNTWN*RGCFSS
Trigger: TGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGA...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTCGAACACGTGGAACTaGAGGGGCTGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRSNTWN*RGCFSS
Trigger: TGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGA...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGTCGAACACGTGGAACTaGAGGGGCTGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: THHSRPEPRGHTWSKRWRSNTWN*RGCFSS
Trigger: TGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGA...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTCAGCTGCATAGGGAATaGAGGGACAGGCGGAACGGC +
Preference number: 4 (lower is better)
Translates to: WHLLPRVCRPFLHLLESAQLHRE*RDRRNG
Trigger: GCCGTTCCGCCTGTCCCTGCATTCCCTATGCAGCTG...AGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp TGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCAGCTGCATAGGGAATaGAGGGACAGGCGGAACGGC +
Preference number: 4 (lower is better)
Translates to: CGTSCPGFAVPSCISWKVQLHRE*RDRRNG
Trigger: GCCGTTCCGCCTGTCCCTGCATTCCCTATGCAGCTG...CACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGTGCAGGGACTGGCTaGTCCTCGGGTCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDSAGTG*SSGPHW
Trigger: CCAATGGGGACCCGAGGAGCAGCCAGTCCCTGCACT...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGACACACTTGGCGAGTaGAGAGGGGGCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPDTLGE*RGGSIL
Trigger: AAGGATGCTGCCCCCTCTGCACTCGCCAAGTGTGTC...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGGACACACTTGGCGAGTaGAGAGGGGGCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEDTLGE*RGGSIL
Trigger: AAGGATGCTGCCCCCTCTGCACTCGCCAAGTGTGTC...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCAGGTTCCTCGGCCACGATCTaGAAGGGGGATACAAGTGGC +
Preference number: 4 (lower is better)
Translates to: QSLPEQDPHGSVLQLSPGSSATI*KGDTSG
Trigger: GCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGA...ACCTGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCACCCCAGCGTCATGGTTaGGGGCTCAGGCACCCATCC +
Preference number: 4 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPPQRHG*GLRHPS
Trigger: GGATGGGTGCCTGAGCCCCCAACCATGACGCTGGGG...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTGGGAGAAGACAGGGCTaGAACAGGAGCGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: GGTPGPRGGGIGHWSHEGGRRQG*NRSEAP
Trigger: AGGTGCTTCGCTCCTGTTCCAGCCCTGTCTTCTCCC...ACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGGGGAGAAGACAGGGCTaGAACAGGAGCGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWGRRQG*NRSEAP
Trigger: AGGTGCTTCGCTCCTGTTCCAGCCCTGTCTTCTCCC...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGTCGGCATCGAACACGTaGAACTGCAGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTSASNT*NCRGCF
Trigger: GAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGA...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTCGGCATCGAACACGTaGAACTGCAGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHSASNT*NCRGCF
Trigger: GAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGA...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TGGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCTATCATTTCGGGGGCTaGTGGCTCCGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: WDSGGGVFVAPPAQGLPSYHFGG*WLRPRH
Trigger: ATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATA...GGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTATCATTTCGGGGGCTaGTGGCTCCGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGYHFGG*WLRPRH
Trigger: ATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATA...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGATATCATTTCGGGGGCTaGTGGCTCCGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRYHFGG*WLRPRH
Trigger: ATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATA...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGACCTGGTCCAAGAGGTaGAGGCATTGGTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKTWSKR*RHWSLE
Trigger: CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGT...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGACCTGGTCCAAGAGGTaGAGGCATTGGTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRTWSKR*RHWSLE
Trigger: CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGT...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCTGGGGCATTGAATACCTaGACCAAGGGTGAGTACAGG +
Preference number: 4 (lower is better)
Translates to: FGGWWLRPRHRTRGTAGAGALNT*TKGEYR
Trigger: CCTGTACTCACCCTTGGTCCAGGTATTCAATGCCCC...AGCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGCATATCCTGGTCACATaGGGGCATCTGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKHILVT*GHLLKD
Trigger: GTCCTTCAGCAGATGCCCTCATGTGACCAGGATATG...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTGGAGGCGATGACCCCTaGGATCTCTTCACATTCAGG +
Preference number: 4 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGGGDDP*DLFTFR
Trigger: CCTGAATGTGAAGAGATCTCAGGGGTCATCGCCTCC...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACAGGCACTGAGAGGCTaGGGGAGTGTCGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEQALRG*GSVGPE
Trigger: CTCCGGACCGACACTCCCTCAGCCTCTCAGTGCCTG...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCTCGAACACGTGGAACTaGAGGGGCTGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVSNTWN*RGCFSS
Trigger: TGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGA...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GCCCAAGGTGCACTCCGTAGAGCCGAGGAAGGTATCATTTCGGGGGCTGGTGGCTCGAACACGTGGAACTaGAGGGGCTGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AQGALRRAEEGIISGAGGSNTWN*RGCFSS
Trigger: TGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGA...GCCACCAGCCCCCGAAATGATACCTTCCTCGGCTCTACGGAGTGCACCTTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACCAGCTGCATAGGGAATaGAGGGACAGGCGGAACGGC +
Preference number: 4 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDQLHRE*RDRRNG
Trigger: GCCGTTCCGCCTGTCCCTGCATTCCCTATGCAGCTG...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAAGTGCAGGGACTGGCTaGTCCTCGGGTCCCCATTGG +
Preference number: 4 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPSAGTG*SSGPHW
Trigger: CCAATGGGGACCCGAGGAGCAGCCAGTCCCTGCACT...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp AGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCGACACACTTGGCGAGTaGAGAGGGGGCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: RTQGAHLVQEVEALVTGVDTLGE*RGGSIL
Trigger: AAGGATGCTGCCCCCTCTGCACTCGCCAAGTGTGTC...GACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TTTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCCACCATAGGTGTCCATaGAGGGGCATTGAATACCTG +
Preference number: 4 (lower is better)
Translates to: FRGLVAPSSASNTWNCRGHHRCP*RGIEYL
Trigger: CAGGTATTCAATGCCCCTGCATGGACACCTATGGTG...GCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp TGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTTCCTCGGCCACGATCTaGAAGGGGGATACAAGTGGC +
Preference number: 4 (lower is better)
Translates to: WHLLPRVCRPFLHLLESASSATI*KGDTSG
Trigger: GCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGA...AGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCACATTTCGGGGGCTGGTaGCTCCGTCCTCGGCATCGA +
Preference number: 4 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPHFGGW*LRPRHR
Trigger: TCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATG...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCTATCATTTCGGGGGCTaGTGGCTCCGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: RTQGAHLVQEVEALVTGVYHFGG*WLRPRH
Trigger: ATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATA...GACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGCCTTCCTGCATCTCCTaGAAAGTGCTGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRPSCIS*KVLVNS
Trigger: CGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGG...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACGCACCGAGTACTTCGTaGCTTGGCCGGTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDAPSTS*LGRCSA
Trigger: AGCAGAGCACCGGCCAAGCCACGAAGTACTCGGTGC...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACGGAGGCATTGGTCACTaGAGTCACGAGGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHGGIGH*SHEGQD
Trigger: GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCC...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGAAGAGGTGGAGGCATTaGTCACTGGAGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGKRWRH*SLESRG
Trigger: CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTT...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGACCTGGTCCAAGAGGTaGAGGCATTGGTCACTGGAG +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHETWSKR*RHWSLE
Trigger: CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGT...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGGAAGGGTATGGGGTTTaGAGAGATAGGAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKEGYGV*RDRSRT
Trigger: GGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGGAAGGGTATGGGGTTTaGAGAGATAGGAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: THHSRPEPRGHTWSKRWREGYGV*RDRSRT
Trigger: GGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGAGTGACCTTGGTTTGTaGCACAATCTGGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: THHSRPEPRGHTWSKRWRSDLGL*HNLAQG
Trigger: ACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACT...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGTGACCTTGGTTTGTaGCACAATCTGGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKSDLGL*HNLAQG
Trigger: ACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACT...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPIVVCA*YLLGHD
Trigger: ATCGTGGCCGAGGAGGTATCAGGCACAAACGACTAT...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp TGGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: WDSGGGVFVAPPAQGLPSIVVCA*YLLGHD
Trigger: ATCGTGGCCGAGGAGGTATCAGGCACAAACGACTAT...GGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEIVVCA*YLLGHD
Trigger: ATCGTGGCCGAGGAGGTATCAGGCACAAACGACTAT...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEIVVCA*YLLGHD
Trigger: ATCGTGGCCGAGGAGGTATCAGGCACAAACGACTAT...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGTTCTCCAGACCAGCTaGTCACTTTGGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEVLQTS*SLWSSL
Trigger: CAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAAC...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp TTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCGTTCTCCAGACCAGCTaGTCACTTTGGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: FWGWGICGTSCPGFAVPSVLQTS*SLWSSL
Trigger: CAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAAC...GGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGGTTCTCCAGACCAGCTaGTCACTTTGGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWVLQTS*SLWSSL
Trigger: CAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAAC...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGAACTTGAGAGGTCGGTaGACATCACAGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: THHSRPEPRGHTWSKRWRNLRGR*TSQLHR
Trigger: CCTATGCAGCTGTGATGTTCACCGACCTCTCAAGTT...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATACACCAGGAACTTaGGAGGTCGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: THHSRPEPRGHTWSKRWRHTPGT*EVGEHH
Trigger: GTGATGTTCACCGACCTCTCAAGTTCCTGGTGTATG...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCCGATACTTGGGGTTaGTACAGTCCCACTGCATCT +
Preference number: 4 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGPDTWG*YSPTAS
Trigger: AGATGCAGTGGGACTGTATCAACCCCAAGTATCGGG...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGACCCGATACTTGGGGTTaGTACAGTCCCACTGCATCT +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRPDTWG*YSPTAS
Trigger: AGATGCAGTGGGACTGTATCAACCCCAAGTATCGGG...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGCCCGATACTTGGGGTTaGTACAGTCCCACTGCATCT +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEPDTWG*YSPTAS
Trigger: AGATGCAGTGGGACTGTATCAACCCCAAGTATCGGG...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCACAGGCACTGAGAGGCTaGGGGAGTGTCGGTCCGGAG +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPQALRG*GSVGPE
Trigger: CTCCGGACCGACACTCCCTCAGCCTCTCAGTGCCTG...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACGAGGGGCCACAGCATTaGAGGGTATGGGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDEGPQH*RVWGLE
Trigger: CTCCAAACCCCATACCCTTCAATGCTGTGGCCCCTC...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CAGCAGAGCCTCCCAGAGCAAGACCCCCATGGTTCCGTCCTTCAGCTGAGCCCATACCTGGACCAAGGGTaGGTACAGGTGATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: QQSLPEQDPHGSVLQLSPYLDQG*VQVILP
Trigger: AGGCAAGATCACCTGTACTCACCCTTGGTCCAGGTA...TGGGCTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCTGGGAGGCTCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp GCCCAAGGTGCACTCCGTAGAGCCGAGGAAGGTATCATTTCGGGGGCTGGTGGCTACCTGGACCAAGGGTaGGTACAGGTGATCTTGCCT +
Preference number: 4 (lower is better)
Translates to: AQGALRRAEEGIISGAGGYLDQG*VQVILP
Trigger: AGGCAAGATCACCTGTACTCACCCTTGGTCCAGGTA...GCCACCAGCCCCCGAAATGATACCTTCCTCGGCTCTACGGAGTGCACCTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGCACATAGTCGTTTGTaGCTGATACCTCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEAHSRL*LIPPRP
Trigger: TGGCCGAGGAGGTATCAGGCACAAACGACTATGTGC...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TGGGATTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCGCACATAGTCGTTTGTaGCTGATACCTCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: WDSGGGVFVAPPAQGLPSAHSRL*LIPPRP
Trigger: TGGCCGAGGAGGTATCAGGCACAAACGACTATGTGC...GGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAATCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGGCACATAGTCGTTTGTaGCTGATACCTCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEAHSRL*LIPPRP
Trigger: TGGCCGAGGAGGTATCAGGCACAAACGACTATGTGC...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTTTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPFAVPS*ISWKVL
Trigger: CAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAA...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGTTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTFAVPS*ISWKVL
Trigger: CAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAA...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCTTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVFAVPS*ISWKVL
Trigger: CAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAA...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGTTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEFAVPS*ISWKVL
Trigger: CAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAA...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TTTGTGCCTGATACCTCCTCGGCCACGATCTGCAAGGGGGATACAAGTGGCAGGCTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: FVPDTSSATICKGDTSGRLLPRV*RPFLHL
Trigger: GAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAG...CCTGCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGAGGTATCAGGCACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGACAATGTCTCGGGCTaGAGGCACCCCTCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPDNVSG*RHPSGA
Trigger: TGCCCCCGAGGGGTGCCTGCAGCCCGAGACATTGTC...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCCAACCTCATATCCTaGTCACATGAGGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGPNLIS*SHEGIC
Trigger: GCAGATGCCCTCATGTGACCAGGATATGAGGTTGGG...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGCCCAACCTCATATCCTaGTCACATGAGGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEPNLIS*SHEGIC
Trigger: GCAGATGCCCTCATGTGACCAGGATATGAGGTTGGG...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGCCCAACCTCATATCCTaGTCACATGAGGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEPNLIS*SHEGIC
Trigger: GCAGATGCCCTCATGTGACCAGGATATGAGGTTGGG...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGGTGAACTCGCCGATAGCAGCACGCAGGGGTaGGGTTTGGTGAGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: RVCRPFLHLLESAGELADSSTQG*GLVSVS
Trigger: GGACACACTCACCAAACCCCACCCCTGCGTGCTGCT...ATCGGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACATTTCGGGGGCTGGTaGCTCCGTCCTCGGCATCGA +
Preference number: 4 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEHFGGW*LRPRHR
Trigger: TCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATG...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGGTTTGTGACACAATCTaGCCCAAGGTGCACTCCGTA +
Preference number: 4 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRVCDTI*PKVHSV
Trigger: TACGGAGTGCACCTTGGGCCAGATTGTGTCACAAAC...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCCTTCCTGCATCTCCTaGAAAGTGCTGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: GGTPGPRGGGIGHWSHEGPSCIS*KVLVNS
Trigger: CGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGG...ACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GCCCAAGGTGCACTCCGTAGAGCCGAGGAAGGTATCATTTCGGGGGCTGGTGGCCCTTCCTGCATCTCCTaGAAAGTGCTGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: AQGALRRAEEGIISGAGGPSCIS*KVLVNS
Trigger: CGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGG...GCCACCAGCCCCCGAAATGATACCTTCCTCGGCTCTACGGAGTGCACCTTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCATTCTCCACCGTGCACTaGGCCAGCACTACCGTCCCT +
Preference number: 4 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPFSTVH*ASTTVP
Trigger: AGGGACGGTAGTGCTGGCCCAGTGCACGGTGGAGAA...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAAGGCAGTGCAGGGACTaGCTGCTCCTCGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPRQCRD*LLLGSP
Trigger: TGGGGACCCGAGGAGCAGCCAGTCCCTGCACTGCCT...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTGAAGGGTATGGGGTTTaGAGAGATAGGAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGEGYGV*RDRSRT
Trigger: GGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACCATATCCTGGTCACATaGGGGCATCTGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHHILVT*GHLLKD
Trigger: GTCCTTCAGCAGATGCCCTCATGTGACCAGGATATG...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCAGTGACCTTGGTTTGTaGCACAATCTGGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTSDLGL*HNLAQG
Trigger: ACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACT...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAAGTGACCTTGGTTTGTaGCACAATCTGGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRSDLGL*HNLAQG
Trigger: ACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACT...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGTTCTCCAGACCAGCTaGTCACTTTGGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTVLQTS*SLWSSL
Trigger: CAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAAC...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp TGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGGTTCTCCAGACCAGCTaGTCACTTTGGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: CGTSCPGFAVPSCISWKVVLQTS*SLWSSL
Trigger: CAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAAC...CACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGAACTTGAGAGGTCGGTaGACATCACAGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHENLRGR*TSQLHR
Trigger: CCTATGCAGCTGTGATGTTCACCGACCTCTCAAGTT...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTAACTTGAGAGGTCGGTaGACATCACAGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: GGTPGPRGGGIGHWSHEGNLRGR*TSQLHR
Trigger: CCTATGCAGCTGTGATGTTCACCGACCTCTCAAGTT...ACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACGGAGGCGATGACCCCTaGGATCTCTTCACATTCAGG +
Preference number: 4 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDGGDDP*DLFTFR
Trigger: CCTGAATGTGAAGAGATCTCAGGGGTCATCGCCTCC...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CCCAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCGTTCCGTCCTTCAGCTaGGCCCAGGTGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: PRCFPPSPLPITYGGLFSVPSFS*AQVLST
Trigger: GGTGGAAAGCACCTGGGCTCAGCTGAAGGACGGAAC...GCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGCACATAGTCGTTTGTaGCTGATACCTCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTAHSRL*LIPPRP
Trigger: TGGCCGAGGAGGTATCAGGCACAAACGACTATGTGC...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGGGTGAACATCACAGCTaGATAGGGAATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTGEHHS*IGNAGT
Trigger: TGTCCCTGCATTCCCTATGCAGCTGTGATGTTCACC...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTGGTGAACATCACAGCTaGATAGGGAATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGGEHHS*IGNAGT
Trigger: TGTCCCTGCATTCCCTATGCAGCTGTGATGTTCACC...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCGGTGAACATCACAGCTaGATAGGGAATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: FWGWGICGTSCPGFAVPSGEHHS*IGNAGT
Trigger: TGTCCCTGCATTCCCTATGCAGCTGTGATGTTCACC...GGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTGAACATCACAGCTaGATAGGGAATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEGEHHS*IGNAGT
Trigger: TGTCCCTGCATTCCCTATGCAGCTGTGATGTTCACC...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGGGTGAACATCACAGCTaGATAGGGAATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEGEHHS*IGNAGT
Trigger: TGTCCCTGCATTCCCTATGCAGCTGTGATGTTCACC...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTTTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: WHLLPRVCRPFLHLLESAFAVPS*ISWKVL
Trigger: CAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAA...AGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGCACCTTCTCCACCGTaGACTGGGCCAGCACTACCG +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPAPSPP*TGPALP
Trigger: CGGTAGTGCTGGCCCAGTGCACGGTGGAGAAGGTGC...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACATAGTCCTGGCAGATaGCTCCCACTGCACGCAGGG +
Preference number: 4 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEHSPGR*LPLHAG
Trigger: CCCTGCGTGCAGTGGGAGGCATCTGCCAGGACTATG...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TTTGTGCCTGATACCTCCTCGGCCACGATCTGCAAGGGGGATACAAGTGGCAGGATTTGTGGCACCTCCTaGCCAGGGTTTGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: FVPDTSSATICKGDTSGRICGTS*PGFAVP
Trigger: AGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAAT...CCTGCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGAGGTATCAGGCACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp CCAAGGGTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTATTTGTGGCACCTCCTaGCCAGGGTTTGCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: PRVSTGDLAYRDGGLARSICGTS*PGFAVP
Trigger: AGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAAT...ACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp AGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCCCCAACCTCATATCCTaGTCACATGAGGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: RTQGAHLVQEVEALVTGVPNLIS*SHEGIC
Trigger: GCAGATGCCCTCATGTGACCAGGATATGAGGTTGGG...GACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TTTGTGCCTGATACCTCCTCGGCCACGATCTGCAAGGGGGATACAAGTGGCAGGTCGGCATCGAACACGTaGAACTGCAGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FVPDTSSATICKGDTSGRSASNT*NCRGCF
Trigger: GAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGA...CCTGCCACTTGTATCCCCCTTGCAGATCGTGGCCGAGGAGGTATCAGGCACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CCAAGGGTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTTATCATTTCGGGGGCTaGTGGCTCCGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PRVSTGDLAYRDGGLARSYHFGG*WLRPRH
Trigger: ATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATA...ACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATGTTTGTGACACAATCTaGCCCAAGGTGCACTCCGTA +
Preference number: 4 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHVCDTI*PKVHSV
Trigger: TACGGAGTGCACCTTGGGCCAGATTGTGTCACAAAC...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGTTTGTGACACAATCTaGCCCAAGGTGCACTCCGTA +
Preference number: 4 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPVCDTI*PKVHSV
Trigger: TACGGAGTGCACCTTGGGCCAGATTGTGTCACAAAC...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TTTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCAGTCATGCTTCCCACTaGAGTCATAGTCATACACCA +
Preference number: 4 (lower is better)
Translates to: FRGLVAPSSASNTWNCRGSHASH*SHSHTP
Trigger: TGGTGTATGACTATGACTCCAGTGGGAAGCATGACT...GCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTCCTTCCTGCATCTCCTaGAAAGTGCTGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTPSCIS*KVLVNS
Trigger: CGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGG...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCCTTCCTGCATCTCCTaGAAAGTGCTGGTGAACTCG +
Preference number: 4 (lower is better)
Translates to: CGTSCPGFAVPSCISWKVPSCIS*KVLVNS
Trigger: CGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGG...CACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGATAGCAAAGTCATaGGACACCTCGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PPLTSRTQGAHLVQEVEALIAKS*DTSKLG
Trigger: CCCCAACTTCGAGGTGTCCCATGACTTTGCTATCAA...TGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAAGCACCGAGTACTTCGTaGCTTGGCCGGTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEAPSTS*LGRCSA
Trigger: AGCAGAGCACCGGCCAAGCCACGAAGTACTCGGTGC...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GAGGAAGGTATCATTTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGGGGCATTGAATACCTaGACCAAGGGTGAGTACAGG +
Preference number: 4 (lower is better)
Translates to: EEGIISGAGGSVLGIEHVGALNT*TKGEYR
Trigger: CCTGTACTCACCCTTGGTCCAGGTATTCAATGCCCC...CACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATACCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp GAGGAAGGTATCATTTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGAGTGACCTTGGTTTGTaGCACAATCTGGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: EEGIISGAGGSVLGIEHVSDLGL*HNLAQG
Trigger: ACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACT...CACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATACCTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAAGGGTCAGACTTGCTaGACAGATCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVKGQTC*TDPCCP
Trigger: TGGACAACAAGGATCTGTTCAGCAAGTCTGACCCTT...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGAAGGGTCAGACTTGCTaGACAGATCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHEKGQTC*TDPCCP
Trigger: TGGACAACAAGGATCTGTTCAGCAAGTCTGACCCTT...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp TTCTGGGGGTGGGGTATTTGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCAAGGGTCAGACTTGCTaGACAGATCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FWGWGICGTSCPGFAVPSKGQTC*TDPCCP
Trigger: TGGACAACAAGGATCTGTTCAGCAAGTCTGACCCTT...GGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAAAGGGTCAGACTTGCTaGACAGATCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRKGQTC*TDPCCP
Trigger: TGGACAACAAGGATCTGTTCAGCAAGTCTGACCCTT...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCAAGGGTCAGACTTGCTaGACAGATCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTKGQTC*TDPCCP
Trigger: TGGACAACAAGGATCTGTTCAGCAAGTCTGACCCTT...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGCAGCACTACCGTCCCTaGGCTCTTGTAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTQHYRP*ALVILL
Trigger: AAGAAGAATTACAAGAGCTCAGGGACGGTAGTGCTG...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCCAGCACTACCGTCCCTaGGCTCTTGTAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVQHYRP*ALVILL
Trigger: AAGAAGAATTACAAGAGCTCAGGGACGGTAGTGCTG...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTCTTCCCTCCATGCAGGGGCATTaGATACCTGGACCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSTGDLAYRDGGLARSLPSMQGH*IPGPRV
Trigger: CACCCTTGGTCCAGGTATTCAATGCCCCTGCATGGA...GGGAAGACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp AGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGGTGAACTCGCCGATCACAAGTCCATCAGGTaGCCCCTCTTTCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: RVCRPFLHLLESAGELADHKSIR*PLFLPS
Trigger: GGAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTG...ATCGGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp GTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTCTTCCCTCGAACACGTGGAACTaGAGGGGCTGCTTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: VSTGDLAYRDGGLARSLPSNTWN*RGCFSS
Trigger: TGAGGAGAAGCAGCCCCTGCAGTTCCACGTGTTCGA...GGGAAGACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCACTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPLLPRV*RPFLHL
Trigger: GAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAG...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TGTGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCACCATAGGTGTCCATaGAGGGGCATTGAATACCTG +
Preference number: 4 (lower is better)
Translates to: CGTSCPGFAVPSCISWKVHHRCP*RGIEYL
Trigger: CAGGTATTCAATGCCCCTGCATGGACACCTATGGTG...CACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GAGGAAGGTATCATTTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGTTTGTGACACAATCTaGCCCAAGGTGCACTCCGTA +
Preference number: 4 (lower is better)
Translates to: EEGIISGAGGSVLGIEHVVCDTI*PKVHSV
Trigger: TACGGAGTGCACCTTGGGCCAGATTGTGTCACAAAC...CACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATACCTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GCTGGTGGCTCCGTCCTCGGCATCGAACACGTGGAACTGCAGGGGCTGCTTCTCAGTCATGCTTCCCACTaGAGTCATAGTCATACACCA +
Preference number: 4 (lower is better)
Translates to: AGGSVLGIEHVELQGLLLSHASH*SHSHTP
Trigger: TGGTGTATGACTATGACTCCAGTGGGAAGCATGACT...GAGAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGAGGACGGAGCCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGAGTCATGCTTCCCACTaGAGTCATAGTCATACACCA +
Preference number: 4 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRSHASH*SHSHTP
Trigger: TGGTGTATGACTATGACTCCAGTGGGAAGCATGACT...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGTCATGCTTCCCACTaGAGTCATAGTCATACACCA +
Preference number: 4 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKSHASH*SHSHTP
Trigger: TGGTGTATGACTATGACTCCAGTGGGAAGCATGACT...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCATTCTCCACCGTGCACTaGGCCAGCACTACCGTCCCT +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPFSTVH*ASTTVP
Trigger: AGGGACGGTAGTGCTGGCCCAGTGCACGGTGGAGAA...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCTTGATAGCAAAGTCATaGGACACCTCGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVLIAKS*DTSKLG
Trigger: CCCCAACTTCGAGGTGTCCCATGACTTTGCTATCAA...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTTGATAGCAAAGTCATaGGACACCTCGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTLIAKS*DTSKLG
Trigger: CCCCAACTTCGAGGTGTCCCATGACTTTGCTATCAA...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACGGAGGCATTGGTCACTaGAGTCACGAGGGTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KGMGFGEIGAGPTTHVQNGGIGH*SHEGQD
Trigger: GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCC...GTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTCTTCCCATCTGGGTGGGATTCTaGGGGTGGGGTATTTGTGGC +
Preference number: 4 (lower is better)
Translates to: VSTGDLAYRDGGLARSLPIWVGF*GWGICG
Trigger: GCCACAAATACCCCACCCCCAGAATCCCACCCAGAT...GGGAAGACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCATCTGGGTGGGATTCTaGGGGTGGGGTATTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFIWVGF*GWGICG
Trigger: GCCACAAATACCCCACCCCCAGAATCCCACCCAGAT...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCACATATCCTGGTCACATaGGGGCATCTGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPHILVT*GHLLKD
Trigger: GTCCTTCAGCAGATGCCCTCATGTGACCAGGATATG...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp CAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATGTTCCGTCCTTCAGCTaGGCCCAGGTGCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: QVLSTLSTSYHLWWSLQHVPSFS*AQVLST
Trigger: GGTGGAAAGCACCTGGGCTCAGCTGAAGGACGGAAC...ATGCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGTCGTGGCTTGGCCGGTaGTCTGCTCCCGCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGSWLGR*SAPAGP
Trigger: CGGCCCAGCGGGAGCAGAGCACCGGCCAAGCCACGA...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCACGGTCCAGGAGGCCATaGCAGGACACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QFSRPADHFGPRWSYRFPRSRRP*QDTRSS
Trigger: GGAGCTGCGGGTGTCCTGCCATGGCCTCCTGGACCG...TGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGAGTCATGCTTCCCACTaGAGTCATAGTCATACACCA +
Preference number: 4 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLESHASH*SHSHTP
Trigger: TGGTGTATGACTATGACTCCAGTGGGAAGCATGACT...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACAAGAGGTGGAGGCATTaGTCACTGGAGTCACGAGGG +
Preference number: 4 (lower is better)
Translates to: KGMGFGEIGAGPTTHVQNKRWRH*SLESRG
Trigger: CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTT...GTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTCTTCCCCAAGGGGGATACAAGTaGCAGGACTCCCCTAACCTT +
Preference number: 4 (lower is better)
Translates to: VSTGDLAYRDGGLARSLPQGGYK*QDSPNL
Trigger: AAGGTTAGGGGAGTCCTGCCACTTGTATCCCCCTTG...GGGAAGACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCAGTGACCTTGGTTTGTaGCACAATCTGGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFSDLGL*HNLAQG
Trigger: ACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACT...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCACATACACCAGGAACTTaGGAGGTCGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPHTPGT*EVGEHH
Trigger: GTGATGTTCACCGACCTCTCAAGTTCCTGGTGTATG...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTCTTCCCCATACACCAGGAACTTaGGAGGTCGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: VSTGDLAYRDGGLARSLPHTPGT*EVGEHH
Trigger: GTGATGTTCACCGACCTCTCAAGTTCCTGGTGTATG...GGGAAGACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTGGAAATGGACATAATTaGTTAAGGACACCCAACCTC +
Preference number: 4 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGGNGHN*LRTPNL
Trigger: GAGGTTGGGTGTCCTTAAGCAATTATGTCCATTTCC...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCGGAAATGGACATAATTaGTTAAGGACACCCAACCTC +
Preference number: 4 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVGNGHN*LRTPNL
Trigger: GAGGTTGGGTGTCCTTAAGCAATTATGTCCATTTCC...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGAAATGGACATAATTaGTTAAGGACACCCAACCTC +
Preference number: 4 (lower is better)
Translates to: PRGHTWSKRWRHWSLESRGNGHN*LRTPNL
Trigger: GAGGTTGGGTGTCCTTAAGCAATTATGTCCATTTCC...TCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CCAAGGGTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTGGTGAACATCACAGCTaGATAGGGAATGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: PRVSTGDLAYRDGGLARSGEHHS*IGNAGT
Trigger: TGTCCCTGCATTCCCTATGCAGCTGTGATGTTCACC...ACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGCGGTCCAGGAGGCCATaGCAGGACACCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGRSRRP*QDTRSS
Trigger: GGAGCTGCGGGTGTCCTGCCATGGCCTCCTGGACCG...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTCGGCATCGAACACGTaGAACTGCAGGGGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GCSSPPQFSRPADHFGPRSASNT*NCRGCF
Trigger: GAAGCAGCCCCTGCAGTTCCACGTGTTCGATGCCGA...ACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp AGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCAGTCATGCTTCCCACTaGAGTCATAGTCATACACCA +
Preference number: 4 (lower is better)
Translates to: RTQGAHLVQEVEALVTGVSHASH*SHSHTP
Trigger: TGGTGTATGACTATGACTCCAGTGGGAAGCATGACT...GACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACTTGATAGCAAAGTCATaGGACACCTCGAAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDLIAKS*DTSKLG
Trigger: CCCCAACTTCGAGGTGTCCCATGACTTTGCTATCAA...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp AAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACGAAGGGTATGGGGTTTaGAGAGATAGGAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: KGMGFGEIGAGPTTHVQNEGYGV*RDRSRT
Trigger: GGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC...GTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGGGTGGGGTATTTGTaGCACCTCCTGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVGVGYL*HLLPRV
Trigger: AACCCTGGGCAGGAGGTGCCACAAATACCCCACCCC...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATGTGGGATTCTGGGGGTaGGGTATTTGTGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: QVLSTLSTSYHLWWSLQHVGFWG*GICGTS
Trigger: GGAGGTGCCACAAATACCCCACCCCCAGAATCCCAC...ATGCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTTCCCAGGGATCTGGGTaGGATTCTGGGGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVSQGSG*DSGGGV
Trigger: TACCCCACCCCCAGAATCCCACCCAGATCCCTGGGA...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATATTCTCCCAGGGATCTaGGTGGGATTCTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QVLSTLSTSYHLWWSLQHILPGI*VGFWGW
Trigger: CCACCCCCAGAATCCCACCCAGATCCCTGGGAGAAT...ATGCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCACATATCCTGGTCACATaGGGGCATCTGCTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPHILVT*GHLLKD
Trigger: GTCCTTCAGCAGATGCCCTCATGTGACCAGGATATG...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGAT +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPIVVCA*YLLGHD
Trigger: ATCGTGGCCGAGGAGGTATCAGGCACAAACGACTAT...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp AGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGGTGAACTCGCCGATAAGGGTCAGACTTGCTaGACAGATCCTTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RVCRPFLHLLESAGELADKGQTC*TDPCCP
Trigger: TGGACAACAAGGATCTGTTCAGCAAGTCTGACCCTT...ATCGGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACATACACCAGGAACTTaGGAGGTCGGTGAACATCAC +
Preference number: 4 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEHTPGT*EVGEHH
Trigger: GTGATGTTCACCGACCTCTCAAGTTCCTGGTGTATG...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CAGTTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGAGGCCCCCAGCGTCATaGTTGGGGGCTCAGGCACCC +
Preference number: 4 (lower is better)
Translates to: QFSLLMARKSGSPKEVTERPPAS*LGAQAP
Trigger: GGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCT...CTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GAACAGATCCTTGTTGTCCAGCTTGTAGGCTCTGAAGGTGAGTTGCACATAGTCGGGGTGGGGTATTTGTaGCACCTCCTGCCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: EQILVVQLVGSEGELHIVGVGYL*HLLPRV
Trigger: AACCCTGGGCAGGAGGTGCCACAAATACCCCACCCC...GACTATGTGCAACTCACCTTCAGAGCCTACAAGCTGGACAACAAGGATCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAAACTTGAGAGGTCGGTaGACATCACAGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPNLRGR*TSQLHR
Trigger: CCTATGCAGCTGTGATGTTCACCGACCTCTCAAGTT...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTCACAAGTCCATCAGGTaGCCCCTCTTTCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVHKSIR*PLFLPS
Trigger: GGAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTG...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACGGAAATGGACATAATTaGTTAAGGACACCCAACCTC +
Preference number: 4 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDGNGHN*LRTPNL
Trigger: GAGGTTGGGTGTCCTTAAGCAATTATGTCCATTTCC...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp GGTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTGCACATAGTCGTTTGTaGCTGATACCTCCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GCSSPPQFSRPADHFGPRAHSRL*LIPPRP
Trigger: TGGCCGAGGAGGTATCAGGCACAAACGACTATGTGC...ACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR GCA 90 bp CACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATATCAGCTGAGCCCAGGTaGTTTCCACCCTCTCCACTT +
Preference number: 4 (lower is better)
Translates to: HHLSSPDQLITLVLVGLISAEPR*FPPSPL
Trigger: AAGTGGAGAGGGTGGAAAGCACCTGGGCTCAGCTGA...TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp TCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATGAACATTTCGGGGGCTGGTaGCTCCGTCCTCGGCATCGA +
Preference number: 4 (lower is better)
Translates to: SPDQLITLVLVGLIDFHEHFGGW*LRPRHR
Trigger: TCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATG...TTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp GTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTAGAGCAAGACCCCCATaGTTCCGTCCTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: VVLHHLSSPDQLITLVLVRARPP*FRPSAE
Trigger: CTCAGCTGAAGGACGGAACCATGGGGGTCTTGCTCT...AACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATAACTTGAGAGGTCGGTaGACATCACAGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: QVLSTLSTSYHLWWSLQHNLRGR*TSQLHR
Trigger: CCTATGCAGCTGTGATGTTCACCGACCTCTCAAGTT...ATGCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATACAAGGGGGATACAAGTaGCAGGACTCCCCTAACCTT +
Preference number: 4 (lower is better)
Translates to: HHLSSPDQLITLVLVGLIQGGYK*QDSPNL
Trigger: AAGGTTAGGGGAGTCCTGCCACTTGTATCCCCCTTG...TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCAGTGGGATTCTGGGGGTaGGGTATTTGTGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: QFSRPADHFGPRWSYRFPVGFWG*GICGTS
Trigger: GGAGGTGCCACAAATACCCCACCCCCAGAATCCCAC...TGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CAGTTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGTCACCACACCGTCAGTaGGCACCAGCAGCACCGAGT +
Preference number: 4 (lower is better)
Translates to: QFSLLMARKSGSPKEVTESPHRQ*APAAPS
Trigger: ACTCGGTGCTGCTGGTGCTCACTGACGGTGTGGTGA...CTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGGACACACTTGGCGAGTaGAGAGGGGGCAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGDTLGE*RGGSIL
Trigger: AAGGATGCTGCCCCCTCTGCACTCGCCAAGTGTGTC...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp GGTTGTTCTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTCCTATCACCTATGGTaGTCTCTTCAGCATCACCCT +
Preference number: 4 (lower is better)
Translates to: GCSSPPQFSRPADHFGPRSYHLW*SLQHHP
Trigger: AGGGTGATGCTGAAGAGACCACCATAGGTGATAGGA...ACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAGAACAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CAGTTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGAGGGGCCACAGCATTaGAGGGTATGGGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QFSLLMARKSGSPKEVTEEGPQH*RVWGLE
Trigger: CTCCAAACCCCATACCCTTCAATGCTGTGGCCCCTC...CTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR GCA 90 bp CAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QFSRPADHFGPRWSYRFPFAVPS*ISWKVL
Trigger: CAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAA...TGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CAGTTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGAGAAGACAGGGCTaGAACAGGAGCGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: QFSLLMARKSGSPKEVTEGRRQG*NRSEAP
Trigger: AGGTGCTTCGCTCCTGTTCCAGCCCTGTCTTCTCCC...CTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATATCCTATCACCTATGGTaGTCTCTTCAGCATCACCCT +
Preference number: 4 (lower is better)
Translates to: HHLSSPDQLITLVLVGLISYHLW*SLQHHP
Trigger: AGGGTGATGCTGAAGAGACCACCATAGGTGATAGGA...TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
3UTR CAA 72 bp GTCTTCCCATTCTTCAGCAATAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGGCCCAAGGTGCACTCC +
Preference number: 4 (lower is better)
Translates to: VFPFFSNNGLVT*VCDTIWPKVHS
Trigger: GGAGTGCACCTTGGGCCAGATTGTGTCACAAACCAAGGTCACTAAGCCATTATTGCTGAAGAATGGGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp CAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCAGTTTGTGACACAATCTaGCCCAAGGTGCACTCCGTA +
Preference number: 4 (lower is better)
Translates to: QFSRPADHFGPRWSYRFPVCDTI*PKVHSV
Trigger: TACGGAGTGCACCTTGGGCCAGATTGTGTCACAAAC...TGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CAGTTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGTTCTCCAGACCAGCTaGTCACTTTGGTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: QFSLLMARKSGSPKEVTEVLQTS*SLWSSL
Trigger: CAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAAC...CTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR TCA 90 bp TCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATGAAAACTTGAGAGGTCGGTaGACATCACAGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: SPDQLITLVLVGLIDFHENLRGR*TSQLHR
Trigger: CCTATGCAGCTGTGATGTTCACCGACCTCTCAAGTT...TTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp CAGTTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGCCCGATACTTGGGGTTaGTACAGTCCCACTGCATCT +
Preference number: 4 (lower is better)
Translates to: QFSLLMARKSGSPKEVTEPDTWG*YSPTAS
Trigger: AGATGCAGTGGGACTGTATCAACCCCAAGTATCGGG...CTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGGTTTGTGACACAATCTaGCCCAAGGTGCACTCCGTA +
Preference number: 4 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGVCDTI*PKVHSV
Trigger: TACGGAGTGCACCTTGGGCCAGATTGTGTCACAAAC...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
3UTR CAA 72 bp CTTCACCACCTCAGTTCTCCAGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATAGATTTCCATGAAAGG +
Preference number: 4 (lower is better)
Translates to: LHHLSSPDQLIT*VLVGLIDFHER
Trigger: CCTTTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR TCA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGCAGCACTACCGTCCCTaGGCTCTTGTAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGQHYRP*ALVILL
Trigger: AAGAAGAATTACAAGAGCTCAGGGACGGTAGTGCTG...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CCA 90 bp CAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCAACTTCCTATCACCTATaGTGGTCTCTTCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: QFSRPADHFGPRWSYRFPTSYHL*WSLQHH
Trigger: GTGATGCTGAAGAGACCACCATAGGTGATAGGAAGT...TGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CCA 90 bp TCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATGAAACTTCCTATCACCTATaGTGGTCTCTTCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: SPDQLITLVLVGLIDFHETSYHL*WSLQHH
Trigger: GTGATGCTGAAGAGACCACCATAGGTGATAGGAAGT...TTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS TCA 90 bp CCACTGCACGCAGGGCCTGCAGGTAGTGGTTGGGCTGTCGGGGACTaGGGCAGTGCAGGGACTGGCTGCTCCTCGGGTCCCCATTGGAGG +
Preference number: 5 (lower is better)
Translates to: PLHAGPAGSGWAVGD*GSAGTGCSSGPHWR
Trigger: CCTCCAATGGGGACCCGAGGAGCAGCCAGTCCCTGCACTGCCTCAGTCCCCGACAGCCCAACCACTACCTGCAGGCCCTGCGTGCAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557829.1
ENST00000558995.5
ENST00000560845.1
ENST00000643170.1
ENST00000643959.1
ENST00000644012.1
ENST00000645359.1
ENST00000646951.1
ENST00000647071.1
CDS GCA 90 bp GCACCCGGGAGAAGACAGGGCTGGAACAGGAGCGAAGCACCTCTGTaGGCTCTACCTGGGCTCTCGGTCGGGGGCTCCTCTCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: APGRRQGWNRSEAPL*ALPGLSVGGSSLRL
Trigger: GAGCCGGAGAGAGGAGCCCCCGACCGAGAGCCCAGGTAGAGCGCACAGAGGTGCTTCGCTCCTGTTCCAGCCCTGTCTTCTCCCGGGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558859.5
ENST00000560092.5
ENST00000644346.1
ENST00000646373.1
CDS CCA 90 bp GCGGGCTCCAGGAGATGTTGTTATGGAGACTGGGCCAAGCTGGGCTaGGCTGGGGCTGGGCTGGGGAGGAAGGGTGGGCTCACCTGGGCT +
Preference number: 5 (lower is better)
Translates to: AGSRRCCYGDWAKLG*AGAGLGRKGGLTWA
Trigger: AGCCCAGGTGAGCCCACCCTTCCTCCCCAGCCCAGCCCCAGCCCAGCCCAGCTTGGCCCAGTCTCCATAACAACATCTCCTGGAGCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp GCAGGACACCCGCAGCTCCACCCGAGAGGCCCCCAGCGTCATGGTTaGGGGCTCAGGCACCCATCCCATCTCAGGGTCCGACATGTCACT +
Preference number: 5 (lower is better)
Translates to: AGHPQLHPRGPQRHG*GLRHPSHLRVRHVT
Trigger: AGTGACATGTCGGACCCTGAGATGGGATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCTCTCGGGTGGAGCTGCGGGTGTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 28 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557889.1
ENST00000558450.5
ENST00000558541.5
ENST00000558795.1
ENST00000558995.5
ENST00000559197.5
ENST00000559778.5
ENST00000560356.5
ENST00000560761.5
ENST00000560828.5
ENST00000560884.5
ENST00000642203.1
ENST00000642848.1
ENST00000643170.1
ENST00000643771.1
ENST00000643959.1
ENST00000644353.1
ENST00000645219.1
ENST00000645359.1
ENST00000645593.1
ENST00000645769.1
ENST00000646450.1
ENST00000646867.1
ENST00000647071.1
ENST00000647537.1
CDS CCA 90 bp CATGGCAGGACACCCGCAGCTCCACCCGAGAGGCCCCCAGCGTCATaGTTGGGGGCTCAGGCACCCATCCCATCTCAGGGTCCGACATGT +
Preference number: 5 (lower is better)
Translates to: HGRTPAAPPERPPAS*LGAQAPIPSQGPTC
Trigger: ACATGTCGGACCCTGAGATGGGATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCTCTCGGGTGGAGCTGCGGGTGTCCTGCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 28 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557889.1
ENST00000558450.5
ENST00000558541.5
ENST00000558795.1
ENST00000558995.5
ENST00000559197.5
ENST00000559778.5
ENST00000560356.5
ENST00000560761.5
ENST00000560828.5
ENST00000560884.5
ENST00000642203.1
ENST00000642848.1
ENST00000643170.1
ENST00000643771.1
ENST00000643959.1
ENST00000644353.1
ENST00000645219.1
ENST00000645359.1
ENST00000645593.1
ENST00000645769.1
ENST00000646450.1
ENST00000646867.1
ENST00000647071.1
ENST00000647537.1
CDS CCA 90 bp CTCCAGGAGATGTTGTTATGGAGACTGGGCCAAGCTGGGCTGGGCTaGGGCTGGGCTGGGGAGGAAGGGTGGGCTCACCTGGGCTCTCGG +
Preference number: 5 (lower is better)
Translates to: LQEMLLWRLGQAGLG*GWAGEEGWAHLGSR
Trigger: CCGAGAGCCCAGGTGAGCCCACCCTTCCTCCCCAGCCCAGCCCCAGCCCAGCCCAGCTTGGCCCAGTCTCCATAACAACATCTCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp TGGGCAGGGCTGGGATCTCTCTGCGGGCTCCAGGAGATGTTGTTATaGAGACTGGGCCAAGCTGGGCTGGGCTGGGGCTGGGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: WAGLGSLCGLQEMLL*RLGQAGLGWGWAGE
Trigger: CTCCCCAGCCCAGCCCCAGCCCAGCCCAGCTTGGCCCAGTCTCCATAACAACATCTCCTGGAGCCCGCAGAGAGATCCCAGCCCTGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS-3UTR CAA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGCCCCCAGCGTCATGGTaGGGGGCTCAGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKPPASW*GAQAPI
Trigger: GATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGG...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS GCA 90 bp TTGGGGAGTCGTGGCTCCCTCCATGCTGCCCGTGGGATGCACGCATaGCACCTTCCCCCAGCAGTGGTACCAAGCCTCGGGCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LGSRGSLHAARGMHA*HLPPAVVPSLGLKQ
Trigger: CTGCTTCAGCCCGAGGCTTGGTACCACTGCTGGGGGAAGGTGGCATGCGTGCATCCCACGGGCAGCATGGAGGGAGCCACGACTCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp AGCAGCACCGAGTACTTCGTGGCTTGGCCGGTGCTCTGCTCCCGCTaGGCCGGCTCAGCCACACGGTTGATGATGGGGGCCACATTGGTG +
Preference number: 5 (lower is better)
Translates to: SSTEYFVAWPVLCSR*AGSATRLMMGATLV
Trigger: CACCAATGTGGCCCCCATCATCAACCGTGTGGCTGAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTCGGTGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557829.1
ENST00000558995.5
ENST00000643170.1
ENST00000643959.1
ENST00000645359.1
ENST00000646951.1
ENST00000647071.1
CDS CCA 90 bp GGCTGGGATCTCTCTGCGGGCTCCAGGAGATGTTGTTATGGAGACTaGGCCAAGCTGGGCTGGGCTGGGGCTGGGCTGGGGAGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: GWDLSAGSRRCCYGD*AKLGWAGAGLGRKG
Trigger: ACCCTTCCTCCCCAGCCCAGCCCCAGCCCAGCCCAGCTTGGCCCAGTCTCCATAACAACATCTCCTGGAGCCCGCAGAGAGATCCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp CGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTaGTCACTGGAGTCACGAGGGTCAGGACAGGCACCTGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RPEPRGHTWSKRWRH*SLESRGSGQAPGRG
Trigger: CCCCCTCCCAGGTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS CCA 90 bp GGGTCCGACATGTCACTGTGGGGACAGAGCAGGTGGCCTGGACTCTaGAAAGGGAACACCTGGGCTCTCGGTCGGGGGCTCCTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: GSDMSLWGQSRWPGL*KGNTWALGRGLLSP
Trigger: CGGAGAGAGGAGCCCCCGACCGAGAGCCCAGGTGTTCCCTTTCCAGAGTCCAGGCCACCTGCTCTGTCCCCACAGTGACATGTCGGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560761.5
ENST00000643771.1
CDS-3UTR CAA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGCCCCCAGCGTCATGGTaGGGGGCTCAGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTPPASW*GAQAPI
Trigger: GATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGG...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS TCA 90 bp TGCACGCATGCCACCTTCCCCCAGCAGTGGTACCAAGCCTCGGGCTaGAGCAGGCAGGGGTATGCCGGCCAGAGTTCATGGCCGGTCAGT +
Preference number: 5 (lower is better)
Translates to: CTHATFPQQWYQASG*SRQGYAGQSSWPVS
Trigger: ACTGACCGGCCATGAACTCTGGCCGGCATACCCCTGCCTGCTTCAGCCCGAGGCTTGGTACCACTGCTGGGGGAAGGTGGCATGCGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp AACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTaGAGTCACGAGGGTCAGGACAGGCACCTGGGAGGGGGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: NPGGTPGPRGGGIGH*SHEGQDRHLGGGGR
Trigger: TCTCCCACCCCCTCCCAGGTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS-3UTR CAA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCCGAGTACTTCGTGGCTaGGCCGGTGCTCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVRVLRG*AGALLP
Trigger: CGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTCG...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTCGAGTACTTCGTGGCTaGGCCGGTGCTCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPRVLRG*AGALLP
Trigger: CGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTCG...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATCAGCCAGGACACACTaGGCGAGTGCAGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: PPLTSRTQGAHLVQEVEASARTH*ASAEGA
Trigger: TGCCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTGA...TGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTCAGCCAGGACACACTaGGCGAGTGCAGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRSARTH*ASAEGA
Trigger: TGCCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTGA...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GCCCAAGGTGCACTCCGTAGAGCCGAGGAAGGTATCATTTCGGGGGCTGGTGGCCTGGGGGTGGGGTATTaGTGGCACCTCCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: AQGALRRAEEGIISGAGGLGVGY*WHLLPR
Trigger: CCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAG...GCCACCAGCCCCCGAAATGATACCTTCCTCGGCTCTACGGAGTGCACCTTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS CCA 90 bp CATCTCAGGGTCCGACATGTCACTGTGGGGACAGAGCAGGTGGCCTaGACTCTGGAAAGGGAACACCTGGGCTCTCGGTCGGGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: HLRVRHVTVGTEQVA*TLEREHLGSRSGAP
Trigger: AGGAGCCCCCGACCGAGAGCCCAGGTGTTCCCTTTCCAGAGTCCAGGCCACCTGCTCTGTCCCCACAGTGACATGTCGGACCCTGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000560761.5
ENST00000643771.1
CDS-3UTR CAA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTCTCCTGCCCAGGGTTaGCCGTCCCTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRSPAQG*PSLPAS
Trigger: AGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGA...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGGGCTCAGCCACACGGTaGATGATGGGGGCCACATTG +
Preference number: 5 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRGSATR*MMGATL
Trigger: CAATGTGGCCCCCATCATCAACCGTGTGGCTGAGCC...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCGAGTACTTCGTGGCTaGGCCGGTGCTCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: QNPGGTPGPRGGGIGHWSRVLRG*AGALLP
Trigger: CGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTCG...ACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCGAGGGGGCAGCATCCTaGAAGTCTCGGAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVEGAAS*KSRKGT
Trigger: CGTGCCCTTCCGAGACTTCAAGGATGCTGCCCCCTC...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGAGGGGGCAGCATCCTaGAAGTCTCGGAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPEGAAS*KSRKGT
Trigger: CGTGCCCTTCCGAGACTTCAAGGATGCTGCCCCCTC...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTCAGCCAGGACACACTaGGCGAGTGCAGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTSARTH*ASAEGA
Trigger: TGCCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTGA...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GAGGAAGGTATCATTTCGGGGGCTGGTGGCTCCGTCCTCGGCATCGAACACGTGCTGGGGGTGGGGTATTaGTGGCACCTCCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: EEGIISGAGGSVLGIEHVLGVGY*WHLLPR
Trigger: CCTGGGCAGGAGGTGCCACAAATACCCCACCCCCAG...CACGTGTTCGATGCCGAGGACGGAGCCACCAGCCCCCGAAATGATACCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS GCA 90 bp CCCCCAGCAGTGGTACCAAGCCTCGGGCTGAAGCAGGCAGGGGTATaGCGGCCAGAGTTCATGGCCGGTCAGTCCATCTATCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: PPAVVPSLGLKQAGV*RPEFMAGQSIYLCL
Trigger: CAGACACAGATAGATGGACTGACCGGCCATGAACTCTGGCCGGCATACCCCTGCCTGCTTCAGCCCGAGGCTTGGTACCACTGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp GCAGCACTGGCACCGTCTCTTAGCGACAGGATTTTTGGGGAGTCGTaGCTCCCTCCATGCTGCCCGTGGGATGCACGCATGCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: AALAPSLSDRIFGES*LPPCCPWDARMPPS
Trigger: GGAAGGTGGCATGCGTGCATCCCACGGGCAGCATGGAGGGAGCCACGACTCCCCAAAAATCCTGTCGCTAAGAGACGGTGCCAGTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp GGAGAGTTGGATGGTCCCTTGGCAGGGAGAGTTGGGTGCAGATGCTaGGCCTCGGCCCTGGAAGCCTCACCTGATAAAGACAGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GELDGPLAGRVGCRC*ASALEASPDKDRPG
Trigger: CCCAGGCCTGTCTTTATCAGGTGAGGCTTCCAGGGCCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CCA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTaGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACCT +
Preference number: 5 (lower is better)
Translates to: HHSRPEPRGHTWSKR*RHWSLESRGSGQAP
Trigger: AGGTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS-3UTR CAA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCCCCCCAGCGTCATGGTaGGGGGCTCAGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFPPASW*GAQAPI
Trigger: GATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGG...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp ACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGTCTCCTGCCCAGGGTTaGCCGTCCCTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: TQGAHLVQEVEALVTGVTSPAQG*PSLPAS
Trigger: AGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGA...CGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTTCTCCTGCCCAGGGTTaGCCGTCCCTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPSPAQG*PSLPAS
Trigger: AGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGA...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCGAGGGGGCAGCATCCTaGAAGTCTCGGAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: RTQGAHLVQEVEALVTGVEGAAS*KSRKGT
Trigger: CGTGCCCTTCCGAGACTTCAAGGATGCTGCCCCCTC...GACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTTCAGCCAGGACACACTaGGCGAGTGCAGAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTSARTH*ASAEGA
Trigger: TGCCCCCTCTGCACTCGCCAAGTGTGTCCTGGCTGA...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp TGGCACCTCCTGCCCAGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTCCTCCTGCCCAGGGTTaGCCGTCCCTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: WHLLPRVCRPFLHLLESAPPAQG*PSLPAS
Trigger: AGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGG...AGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS GCA 90 bp GTGGGAGAGTTGGATGGTCCCTTGGCAGGGAGAGTTGGGTGCAGATaGTGGGCCTCGGCCCTGGAAGCCTCACCTGATAAAGACAGGCCT +
Preference number: 5 (lower is better)
Translates to: VGELDGPLAGRVGCR*WASALEASPDKDRP
Trigger: AGGCCTGTCTTTATCAGGTGAGGCTTCCAGGGCCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CCA 90 bp GGGTCCGACATGTCACTGTGGGGACAGAGCAGGTGGCCTGGACTCTaGAAAGGGAACACCTGCCAGCAGAGGGGTCTATCCTCTAGGGTC +
Preference number: 5 (lower is better)
Translates to: GSDMSLWGQSRWPGL*KGNTCQQRGLSSRV
Trigger: GACCCTAGAGGATAGACCCCTCTGCTGGCAGGTGTTCCCTTTCCAGAGTCCAGGCCACCTGCTCTGTCCCCACAGTGACATGTCGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp CTGCCCTCCCCTCGAGTTCCTTCATTAAGCAGTGGGAGAGTTGGATaGTCCCTTGGCAGGGAGAGTTGGGTGCAGATGCTGGGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: LPSPRVPSLSSGRVG*SLGRESWVQMLGLG
Trigger: GCCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCCCACTGCTTAATGAAGGAACTCGAGGGGAGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS-3UTR CAA 90 bp CCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCAATCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: PPLTSRTQGAHLVQEVEAIVMVD*PAVFPF
Trigger: GAATGGGAAGACTGCGGGCAAGTCCACCATCACGAT...TGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGCAAGAGGTGGAGGCATaGGTCACTGGAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEQEVEA*VTGVTR
Trigger: CCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTG...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCCAAGAGGTGGAGGCATaGGTCACTGGAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTQEVEA*VTGVTR
Trigger: CCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTG...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS CCA 90 bp CATCTCAGGGTCCGACATGTCACTGTGGGGACAGAGCAGGTGGCCTaGACTCTGGAAAGGGAACACCTGCCAGCAGAGGGGTCTATCCTC +
Preference number: 5 (lower is better)
Translates to: HLRVRHVTVGTEQVA*TLEREHLPAEGSIL
Trigger: GAGGATAGACCCCTCTGCTGGCAGGTGTTCCCTTTCCAGAGTCCAGGCCACCTGCTCTGTCCCCACAGTGACATGTCGGACCCTGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp CCCTCGAGTTCCTTCATTAAGCAGTGGGAGAGTTGGATGGTCCCTTaGCAGGGAGAGTTGGGTGCAGATGCTGGGCCTCGGCCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PSSSFIKQWESWMVP*QGELGADAGPRPWK
Trigger: CTTCCAGGGCCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCCCACTGCTTAATGAAGGAACTCGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CCA 90 bp AGGCAGGGTCATCTGAGGGAGAAGTGGGGCTTCAGGGTGGCCAGCTaGGCTCCCGCGTCCTTAGCAGGACATCAAATGGTGGAAGACGAA +
Preference number: 5 (lower is better)
Translates to: RQGHLREKWGFRVAS*APASLAGHQMVEDE
Trigger: TTCGTCTTCCACCATTTGATGTCCTGCTAAGGACGCGGGAGCCCAGCTGGCCACCCTGAAGCCCCACTTCTCCCTCAGATGACCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS-3UTR CAA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCACCCCCAGCGTCATGGTaGGGGGCTCAGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPPPASW*GAQAPI
Trigger: GATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGG...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTATCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGIVMVD*PAVFPF
Trigger: GAATGGGAAGACTGCGGGCAAGTCCACCATCACGAT...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGATCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEIVMVD*PAVFPF
Trigger: GAATGGGAAGACTGCGGGCAAGTCCACCATCACGAT...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGGTTGCACATAGTCGTTaGTGCCTGATACCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SRTHHSRPEPRGHTWSKRVAHSR*CLIPPR
Trigger: CCGAGGAGGTATCAGGCACAAACGACTATGTGCAAC...CCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGTCCCGATACTTGGGGTaGATACAGTCCCACTGCATC +
Preference number: 5 (lower is better)
Translates to: THHSRPEPRGHTWSKRWRSRYLG*IQSHCI
Trigger: GATGCAGTGGGACTGTATCAACCCCAAGTATCGGGA...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCGAGTACTTCGTGGCTaGGCCGGTGCTCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: KGMGFGEIGAGPTTHVQNRVLRG*AGALLP
Trigger: CGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTCG...GTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGTCAGAGAAGTCAGCATaGCCCACGCCTACGATGATG +
Preference number: 5 (lower is better)
Translates to: RSRTHHSRPEPRGHTWSKSEKSA*PTPTMM
Trigger: CATCATCGTAGGCGTGGGCAATGCTGACTTCTCTGA...CTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGGGTTTGCCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGGTGAACTCGCCGATCCTCCTGCCCAGGGTTaGCCGTCCCTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: RVCRPFLHLLESAGELADPPAQG*PSLPAS
Trigger: AGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGG...ATCGGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS GCA 90 bp GCCTCAGCACCTTCTGCTATTTCCCGACTGGTGTTGTGCCAGCGCTaGACTCAGTCTTGGCACGAGGGAGCTAAACTAGGGCAAGGGGGT +
Preference number: 5 (lower is better)
Translates to: ASAPSAISRLVLCQR*TQSWHEGAKLGQGG
Trigger: ACCCCCTTGCCCTAGTTTAGCTCCCTCGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp AGGATGGGTCTCAGAAGTGGAGTCTGCAGTGGGCAGGAGACAGGTTaGAAAGTCCCCTGCTGGGCTATCCCTATCCACTCCCTACCCCCA +
Preference number: 5 (lower is better)
Translates to: RMGLRSGVCSGQETG*KVPCWAIPIHSLPP
Trigger: TGGGGGTAGGGAGTGGATAGGGATAGCCCAGCAGGGGACTTTCCAACCTGTCTCCTGCCCACTGCAGACTCCACTTCTGAGACCCATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp CCTAGGTATGCGTGGATGGGGCTGGAGAGGGCTGAAGGATTGGGGTaGGGATGTTCCTGGCAGTCTTGGCTCCTAGGCCATCGATTGATC +
Preference number: 5 (lower is better)
Translates to: PRYAWMGLERAEGLG*GCSWQSWLLGHRLI
Trigger: GATCAATCGATGGCCTAGGAGCCAAGACTGCCAGGAACATCCCCACCCCAATCCTTCAGCCCTCTCCAGCCCCATCCACGCATACCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp AGGACTGCCCTCCCCTCGAGTTCCTTCATTAAGCAGTGGGAGAGTTaGATGGTCCCTTGGCAGGGAGAGTTGGGTGCAGATGCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: RTALPSSSFIKQWES*MVPWQGELGADAGP
Trigger: AGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCCCACTGCTTAATGAAGGAACTCGAGGGGAGGGCAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS-3UTR CAA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACATCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHIVMVD*PAVFPF
Trigger: GAATGGGAAGACTGCGGGCAAGTCCACCATCACGAT...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCGTTGCACATAGTCGTTaGTGCCTGATACCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTVAHSR*CLIPPR
Trigger: CCGAGGAGGTATCAGGCACAAACGACTATGTGCAAC...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTGGCTCTGAAGGTGAGTaGCACATAGTCGTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGGSEGE*HIVVCA
Trigger: GGCACAAACGACTATGTGCAACTCACCTTCAGAGCC...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGGGCTCTGAAGGTGAGTaGCACATAGTCGTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLEGSEGE*HIVVCA
Trigger: GGCACAAACGACTATGTGCAACTCACCTTCAGAGCC...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGGGCTCTGAAGGTGAGTaGCACATAGTCGTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWGSEGE*HIVVCA
Trigger: GGCACAAACGACTATGTGCAACTCACCTTCAGAGCC...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCATCTCCTGCCCAGGGTTaGCCGTCCCTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPSPAQG*PSLPAS
Trigger: AGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGA...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCCCGATACTTGGGGTaGATACAGTCCCACTGCATC +
Preference number: 5 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGSRYLG*IQSHCI
Trigger: GATGCAGTGGGACTGTATCAACCCCAAGTATCGGGA...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGTCCCGATACTTGGGGTaGATACAGTCCCACTGCATC +
Preference number: 5 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHESRYLG*IQSHCI
Trigger: GATGCAGTGGGACTGTATCAACCCCAAGTATCGGGA...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTCTTGTCCCGATACTaGGGGTTGATACAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: PPLTSRTQGAHLVQEVEAFLSRY*GLIQSH
Trigger: GTGGGACTGTATCAACCCCAAGTATCGGGACAAGAA...TGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCAGAGAAGTCAGCATaGCCCACGCCTACGATGATG +
Preference number: 5 (lower is better)
Translates to: RDRSRTHHSRPEPRGHTWSEKSA*PTPTMM
Trigger: CATCATCGTAGGCGTGGGCAATGCTGACTTCTCTGA...CCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTTCAGAGAAGTCAGCATaGCCCACGCCTACGATGATG +
Preference number: 5 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPSEKSA*PTPTMM
Trigger: CATCATCGTAGGCGTGGGCAATGCTGACTTCTCTGA...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACCAAGAGGTGGAGGCATaGGTCACTGGAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDQEVEA*VTGVTR
Trigger: CCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTG...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS TCA 90 bp GATCTCAGGGTGAGGCTGTCTGATCCCATGTCATGCTTCCCCGAGTaGGTGTGCATTGGTGTGTCTGAGTGCCCCACCCTCCGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: DLRVRLSDPMSCFPE*VCIGVSECPTLRVC
Trigger: ACAGACACGGAGGGTGGGGCACTCAGACACACCAATGCACACTCACTCGGGGAAGCATGACATGGGATCAGACAGCCTCACCCTGAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS GCA 90 bp CTTTCTGCCGCCTCAGCACCTTCTGCTATTTCCCGACTGGTGTTGTaGCAGCGCTGCACTCAGTCTTGGCACGAGGGAGCTAAACTAGGG +
Preference number: 5 (lower is better)
Translates to: LSAASAPSAISRLVL*QRCTQSWHEGAKLG
Trigger: CCCTAGTTTAGCTCCCTCGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp CTGGAGAGGGCTGAAGGATTGGGGTGGGGATGTTCCTGGCAGTCTTaGCTCCTAGGCCATCGATTGATCTACACTTTCTGCCGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LERAEGLGWGCSWQS*LLGHRLIYTFCRLS
Trigger: GCTGAGGCGGCAGAAAGTGTAGATCAATCGATGGCCTAGGAGCCAAGACTGCCAGGAACATCCCCACCCCAATCCTTCAGCCCTCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp CCAGGTCTGAGGACTGCCCTCCCCTCGAGTTCCTTCATTAAGCAGTaGGAGAGTTGGATGGTCCCTTGGCAGGGAGAGTTGGGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: PGLRTALPSSSFIKQ*ESWMVPWQGELGAD
Trigger: ATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCCCACTGCTTAATGAAGGAACTCGAGGGGAGGGCAGTCCTCAGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CCA 90 bp GCGTCCTTAGCAGGACATCAAATGGTGGAAGACGAAGGTCAGATTTaGGGGGATGAGAAGCTGAGGAGTCCTTCAGCCGGAAGGGGCCCG +
Preference number: 5 (lower is better)
Translates to: ASLAGHQMVEDEGQI*GDEKLRSPSAGRGP
Trigger: CGGGCCCCTTCCGGCTGAAGGACTCCTCAGCTTCTCATCCCCCCAAATCTGACCTTCGTCTTCCACCATTTGATGTCCTGCTAAGGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS CCA 90 bp TGGTCACTGGAGTCACGAGGGTCAGGACAGGCACCTGGGAGGGGGTaGGAGAGTCATAAGCACTCTCTTCTACACTACACCCAGCCTAGT +
Preference number: 5 (lower is better)
Translates to: WSLESRGSGQAPGRG*ESHKHSLLHYTQPS
Trigger: ACTAGGCTGGGTGTAGTGTAGAAGAGAGTGCTTATGACTCTCCCACCCCCTCCCAGGTGCCTGTCCTGACCCTCGTGACTCCAGTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS-3UTR CAA 90 bp CACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTTCTTGTCCCGATACTaGGGGTTGATACAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: HHSRPEPRGHTWSKRWRHFLSRY*GLIQSH
Trigger: GTGGGACTGTATCAACCCCAAGTATCGGGACAAGAA...ATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAAGGCTCAGCCACACGGTaGATGATGGGGGCCACATTG +
Preference number: 5 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEGSATR*MMGATL
Trigger: CAATGTGGCCCCCATCATCAACCGTGTGGCTGAGCC...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp ACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTTCAGAGAAGTCAGCATaGCCCACGCCTACGATGATG +
Preference number: 5 (lower is better)
Translates to: TSRTQGAHLVQEVEALVTSEKSA*PTPTMM
Trigger: CATCATCGTAGGCGTGGGCAATGCTGACTTCTCTGA...AGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAGGGGGCAGCATCCTaGAAGTCTCGGAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPEGAAS*KSRKGT
Trigger: CGTGCCCTTCCGAGACTTCAAGGATGCTGCCCCCTC...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CACCCCACAAGCTCAGGGTCACAAGTCCATCAGGTGACCCCTCTTTCTCCCTTCACCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: HPTSSGSQVHQVTPLSPFTVMVD*PAVFPF
Trigger: GAATGGGAAGACTGCGGGCAAGTCCACCATCACGGT...GAAGGGAGAAAGAGGGGTCACCTGATGGACTTGTGACCCTGAGCTTGTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS CCA 90 bp GATCTACACTTTCTGCCGCCTCAGCACCTTCTGCTATTTCCCGACTaGTGTTGTGCCAGCGCTGCACTCAGTCTTGGCACGAGGGAGCTA +
Preference number: 5 (lower is better)
Translates to: DLHFLPPQHLLLFPD*CCASAALSLGTREL
Trigger: TAGCTCCCTCGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAAGTGTAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS-3UTR CAA 90 bp ACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGAAGCCATCACATACCTaGCTGAACGTCATAGCTTTG +
Preference number: 5 (lower is better)
Translates to: THHSRPEPRGHTWSKRWRKPSHT*LNVIAL
Trigger: CAAAGCTATGACGTTCAGCAAGGTATGTGATGGCTT...CCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTGGTGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATA +
Preference number: 5 (lower is better)
Translates to: EIGAGPTTHVQNPGGTPGDQLIT*VLVGLI
Trigger: TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTC...ACCAGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GCCCAAGGTGCACTCCGTAGAGCCGAGGAAGGTATCATTTCGGGGGCTGGTGGCGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATA +
Preference number: 5 (lower is better)
Translates to: AQGALRRAEEGIISGAGGDQLIT*VLVGLI
Trigger: TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTC...GCCACCAGCCCCCGAAATGATACCTTCCTCGGCTCTACGGAGTGCACCTTGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp AGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATA +
Preference number: 5 (lower is better)
Translates to: RGHTWSKRWRHWSLESRGDQLIT*VLVGLI
Trigger: TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTC...CCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACTTCTTGTCCCGATACTaGGGGTTGATACAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHFLSRY*GLIQSH
Trigger: GTGGGACTGTATCAACCCCAAGTATCGGGACAAGAA...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS TCA 90 bp CAGCTTGTAGGCTCTGAAGGTGAGTTGCACATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGATCGTGATGGTGGACTTGCCCGCAGT +
Preference number: 5 (lower is better)
Translates to: QLVGSEGELHIVVCA*YLLGHDRDGGLARS
Trigger: ACTGCGGGCAAGTCCACCATCACGATCGTGGCCGAGGAGGTATCAGGCACAAACGACTATGTGCAACTCACCTTCAGAGCCTACAAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000558541.5
ENST00000559207.1
ENST00000645359.1
ENST00000646450.1
ENST00000647071.1
ENST00000647147.1
CDS TCA 90 bp GGCCCCCTCCTGACACTCCTTAAAGCAAGGAAATGCTTCCAGGTCTaGGGACTGCCCTCCCCTCGAGTTCCTTCATTAAGCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: GPLLTLLKARKCFQV*GLPSPRVPSLSSGR
Trigger: TCTCCCACTGCTTAATGAAGGAACTCGAGGGGAGGGCAGTCCTCAGACCTGGAAGCATTTCCTTGCTTTAAGGAGTGTCAGGAGGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS-3UTR CAA 90 bp CCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGCTGAACGTCATAGCTTaGAGAATGATGTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: PGGTPGPRGGGIGHWSHELNVIA*RMMSSS
Trigger: GGAACTGGACATCATTCTCAAAGCTATGACGTTCAG...CTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTCTGAACGTCATAGCTTaGAGAATGATGTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: GEIGAGPTTHVQNPGGTPLNVIA*RMMSSS
Trigger: GGAACTGGACATCATTCTCAAAGCTATGACGTTCAG...AGGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCCTGAACGTCATAGCTTaGAGAATGATGTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: GAHLVQEVEALVTGVTRVLNVIA*RMMSSS
Trigger: GGAACTGGACATCATTCTCAAAGCTATGACGTTCAG...GACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGG +
Preference number: 5 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTNGLVT*VCDTIW
Trigger: CCAGATTGTGTCACAAACCAAGGTCACTAAGCCATT...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCAGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGG +
Preference number: 5 (lower is better)
Translates to: PEPRGHTWSKRWRHWSLENGLVT*VCDTIW
Trigger: CCAGATTGTGTCACAAACCAAGGTCACTAAGCCATT...CTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCAAGGGTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTGTTGCACATAGTCGTTaGTGCCTGATACCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: PRVSTGDLAYRDGGLARSVAHSR*CLIPPR
Trigger: CCGAGGAGGTATCAGGCACAAACGACTATGTGCAAC...ACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp TGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCAGGGGGCACACCTTTTCCGGGTCAAAGTaGATAGCAAAGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: WRDRSRTHHSRPEPRGHTFSGSK*IAKSWD
Trigger: GTCCCATGACTTTGCTATCAACTTTGACCCGGAAAA...GGTGTGCCCCCTGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS TCA 90 bp CATGGCCGGTCAGTCCATCTATCTGTGTCTGTACAGATCTCAGGGTaGGGCTGTCTGATCCCATGTCATGCTTCCCCGAGTGAGTGTGCA +
Preference number: 5 (lower is better)
Translates to: HGRSVHLSVSVQISG*GCLIPCHASPSECA
Trigger: TGCACACTCACTCGGGGAAGCATGACATGGGATCAGACAGCCTCACCCTGAGATCTGTACAGACACAGATAGATGGACTGACCGGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS GCA 90 bp CTAGGCCATCGATTGATCTACACTTTCTGCCGCCTCAGCACCTTCTaGTATTTCCCGACTGGTGTTGTGCCAGCGCTGCACTCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: LGHRLIYTFCRLSTF*YFPTGVVPALHSVL
Trigger: CAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAAGTGTAGATCAATCGATGGCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS GCA 90 bp TCCTGGCAGTCTTGGCTCCTAGGCCATCGATTGATCTACACTTTCTaGCGCCTCAGCACCTTCTGCTATTTCCCGACTGGTGTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: SWQSWLLGHRLIYTF*RLSTFCYFPTGVVP
Trigger: TGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAAGTGTAGATCAATCGATGGCCTAGGAGCCAAGACTGCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp GGGTGTGACAGTTCCTGTACCTCCCTCAGAAGTGGGACCTTTCTCTaGCTGGGTATCTACCTCCCCACAGTGTGTGCCTTTCTGGATATG +
Preference number: 5 (lower is better)
Translates to: GCDSSCTSLRSGTFL*LGIYLPTVCAFLDM
Trigger: CATATCCAGAAAGGCACACACTGTGGGGAGGTAGATACCCAGCCAGAGAAAGGTCCCACTTCTGAGGGAGGTACAGGAACTGTCACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 90 bp GGGGTGCATAAGCTGACAATGCGAAGGCTCATGAGCAGCCCAAGTTaGGGCAGTGGAGATTCTGGGCTCCTTCCTTTCACTATGGACTCA +
Preference number: 5 (lower is better)
Translates to: GVHKLTMRRLMSSPS*GSGDSGLLPFTMDS
Trigger: TGAGTCCATAGTGAAAGGAAGGAGCCCAGAATCTCCACTGCCCCAACTTGGGCTGCTCATGAGCCTTCGCATTGTCAGCTTATGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS CCA 90 bp TGGGAGAGTCATAAGCACTCTCTTCTACACTACACCCAGCCTAGTTaGGCTCTACCAAGCCCCACTTTGCACCCCCTGTGTCCACTCCTT +
Preference number: 5 (lower is better)
Translates to: WESHKHSLLHYTQPS*ALPSPTLHPLCPLL
Trigger: AAGGAGTGGACACAGGGGGTGCAAAGTGGGGCTTGGTAGAGCCCAACTAGGCTGGGTGTAGTGTAGAAGAGAGTGCTTATGACTCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS-3UTR CAA 90 bp TCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATGAACCCCCAGCGTCATGGTaGGGGGCTCAGGCACCCATC +
Preference number: 5 (lower is better)
Translates to: SPDQLITLVLVGLIDFHEPPASW*GAQAPI
Trigger: GATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGG...TTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGG +
Preference number: 5 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHNGLVT*VCDTIW
Trigger: CCAGATTGTGTCACAAACCAAGGTCACTAAGCCATT...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AGAACCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCATGAAAGGGTCAGACTaGCTGAACAGATCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RTQGAHLVQEVEALVTGVMKGSD*LNRSLL
Trigger: CAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCAT...GACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACAGGCACATGAAAGGGTCAGACTaGCTGAACAGATCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GPRGGGIGHWSHEGQDRHMKGSD*LNRSLL
Trigger: CAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCAT...GTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACTCCCGATACTTGGGGTaGATACAGTCCCACTGCATC +
Preference number: 5 (lower is better)
Translates to: KGMGFGEIGAGPTTHVQNSRYLG*IQSHCI
Trigger: GATGCAGTGGGACTGTATCAACCCCAAGTATCGGGA...GTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CAGGTGCTTTCCACCCTCTCCACTTCCTATCACCTATGGTGGTCTCTTCAGCATACCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: QVLSTLSTSYHLWWSLQHTVMVD*PAVFPF
Trigger: GAATGGGAAGACTGCGGGCAAGTCCACCATCACGGT...ATGCTGAAGAGACCACCATAGGTGATAGGAAGTGGAGAGGGTGGAAAGCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp ACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTGGAGTCACGAGGGTCAGGACATGAAAGGGTCAGACTaGCTGAACAGATCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TPGPRGGGIGHWSHEGQDMKGSD*LNRSLL
Trigger: CAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCAT...GTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CCAAGGGTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATA +
Preference number: 5 (lower is better)
Translates to: PRVSTGDLAYRDGGLARSDQLIT*VLVGLI
Trigger: TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTC...ACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp GGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACCCACTGAACGTCATAGCTTaGAGAATGATGTCCAGTTCC +
Preference number: 5 (lower is better)
Translates to: GMGFGEIGAGPTTHVQNPLNVIA*RMMSSS
Trigger: GGAACTGGACATCATTCTCAAAGCTATGACGTTCAG...TGGGTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTCTTCCCATGAAAGGGTCAGACTaGCTGAACAGATCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VSTGDLAYRDGGLARSLPMKGSD*LNRSLL
Trigger: CAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCAT...GGGAAGACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp CCAAGGGTGAGTACAGGTGATCTTGCCTACCGTGATGGTGGACTTGCCCGCAGTATGAAAGGGTCAGACTaGCTGAACAGATCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PRVSTGDLAYRDGGLARSMKGSD*LNRSLL
Trigger: CAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCAT...ACTGCGGGCAAGTCCACCATCACGGTAGGCAAGATCACCTGTACTCACCCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAAGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATA +
Preference number: 5 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEDQLIT*VLVGLI
Trigger: TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTC...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp ATTGAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCATTCTTGTCCCGATACTaGGGGTTGATACAGTCCCAC +
Preference number: 5 (lower is better)
Translates to: IEGYGVWRDRSRTHHSRPFLSRY*GLIQSH
Trigger: GTGGGACTGTATCAACCCCAAGTATCGGGACAAGAA...TGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS TCA 90 bp CACACATATCTTGACACACACAGGCGCCAGTACATAAACTCACTGTaGCACCACGACAGTTACAGCCCCCGGCGGATACACATTGGGAAA +
Preference number: 5 (lower is better)
Translates to: HTYLDTHRRQYINSL*HHDSYSPRRIHIGK
Trigger: TTTCCCAATGTGTATCCGCCGGGGGCTGTAACTGTCGTGGTGTCACAGTGAGTTTATGTACTGGCGCCTGTGTGTGTCAAGATATGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558995.5
ENST00000643170.1
CDS-3UTR CAA 90 bp AAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGG +
Preference number: 5 (lower is better)
Translates to: KGMGFGEIGAGPTTHVQNNGLVT*VCDTIW
Trigger: CCAGATTGTGTCACAAACCAAGGTCACTAAGCCATT...GTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp AAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAACATGAAAGGGTCAGACTaGCTGAACAGATCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KGMGFGEIGAGPTTHVQNMKGSD*LNRSLL
Trigger: CAACAAGGATCTGTTCAGCAAGTCTGACCCTTTCAT...GTTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp GAAGGGTATGGGGTTTGGAGAGATAGGAGCAGGACCCACCACTCACGTCCAGAATTTTCCGGGTCAAAGTaGATAGCAAAGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: EGYGVWRDRSRTHHSRPEFSGSK*IAKSWD
Trigger: GTCCCATGACTTTGCTATCAACTTTGACCCGGAAAA...TTCTGGACGTGAGTGGTGGGTCCTGCTCCTATCTCTCCAAACCCCATACCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGCAAGAGGTGGAGGCATaGGTCACTGGAGTCACGAGG +
Preference number: 5 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGQEVEA*VTGVTR
Trigger: CCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTG...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS CCA 90 bp CTCACTGTGACACCACGACAGTTACAGCCCCCGGCGGATACACATTaGGAAACATACCCCTTCTCACATCACTTTCAACATTGTTACACT +
Preference number: 5 (lower is better)
Translates to: LTVTPRQLQPPADTH*ETYPFSHHFQHCYT
Trigger: AGTGTAACAATGTTGAAAGTGATGTGAGAAGGGGTATGTTTCCCAATGTGTATCCGCCGGGGGCTGTAACTGTCGTGGTGTCACAGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558995.5
ENST00000643170.1
CDS GCA 90 bp CTGCTATTTATGGGGCCCGGAATACAGCAGGATGTGATCTTCCCGTaGTCCTTAAAAGCCATCACATACCTTGCTGAACGTCATAGCTTT +
Preference number: 5 (lower is better)
Translates to: LLFMGPGIQQDVIFP*SLKAITYLAERHSF
Trigger: AAAGCTATGACGTTCAGCAAGGTATGTGATGGCTTTTAAGGAGCACGGGAAGATCACATCCTGCTGTATTCCGGGCCCCATAAATAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CACCACCTCAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGG +
Preference number: 5 (lower is better)
Translates to: HHLSSPDQLITLVLVGLINGLVT*VCDTIW
Trigger: CCAGATTGTGTCACAAACCAAGGTCACTAAGCCATT...TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp TCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCATGAAGTTGCACATAGTCGTTaGTGCCTGATACCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SPDQLITLVLVGLIDFHEVAHSR*CLIPPR
Trigger: CCGAGGAGGTATCAGGCACAAACGACTATGTGCAAC...TTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp CAGTTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGTTGCACATAGTCGTTaGTGCCTGATACCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: QFSLLMARKSGSPKEVTEVAHSR*CLIPPR
Trigger: CCGAGGAGGTATCAGGCACAAACGACTATGTGCAAC...CTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp CAGTTCTCCAGACCAGCTGATCACTTTGGTCCTCGTTGGTCTTATAGATTTCCAAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGG +
Preference number: 5 (lower is better)
Translates to: QFSRPADHFGPRWSYRFPNGLVT*VCDTIW
Trigger: CCAGATTGTGTCACAAACCAAGGTCACTAAGCCATT...TGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558795.1
ENST00000642848.1
CDS-3UTR CAA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATA +
Preference number: 5 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGDQLIT*VLVGLI
Trigger: TATAAGACCAACGAGGACCAAAGTGATCAGCTGGTC...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS-3UTR CAA 90 bp TTCTCTTTATTAATGGCTAGAAAGTCAGGATCACCCAAGGAAGTCACTGAGGGGTTTTCCGGGTCAAAGTaGATAGCAAAGTCATGGGAC +
Preference number: 5 (lower is better)
Translates to: FSLLMARKSGSPKEVTEGFSGSK*IAKSWD
Trigger: GTCCCATGACTTTGCTATCAACTTTGACCCGGAAAA...CCCCTCAGTGACTTCCTTGGGTGATCCTGACTTTCTAGCCATTAATAAAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000645359.1
ENST00000647071.1
CDS GCA 90 bp CCTTCTCACATCACTTTCAACATTGTTACACTAGCTAAGGATATCTaGAGTCACATATACAGGAACACTGGGCTGTCCTTGTCACACATG +
Preference number: 5 (lower is better)
Translates to: PSHITFNIVTLAKDI*SHIYRNTGLSLSHM
Trigger: CATGTGTGACAAGGACAGCCCAGTGTTCCTGTATATGTGACTGCAGATATCCTTAGCTAGTGTAACAATGTTGAAAGTGATGTGAGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558995.5
ENST00000559778.5
ENST00000643170.1
ENST00000645769.1
CDS TCA 72 bp GCAGGGCCTGCAGGTAGTGGTTGGGCTGTCGGGGACTaGGGCAGTGCAGGGACTGGCTGCTCCTCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: AGPAGSGWAVGD*GSAGTGCSSGP
Trigger: GGGACCCGAGGAGCAGCCAGTCCCTGCACTGCCTCAGTCCCCGACAGCCCAACCACTACCTGCAGGCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557829.1
ENST00000558995.5
ENST00000560845.1
ENST00000643170.1
ENST00000643959.1
ENST00000644012.1
ENST00000645359.1
ENST00000646951.1
ENST00000647071.1
CDS GCA 72 bp GCACCAGCAGCACCGAGTACTTCGTGGCTTGGCCGGTaGTCTGCTCCCGCTGGGCCGGCTCAGCCACACGGT +
Preference number: 6 (lower is better)
Translates to: APAAPSTSWLGR*SAPAGPAQPHG
Trigger: ACCGTGTGGCTGAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTCGGTGCTGCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557829.1
ENST00000558995.5
ENST00000643170.1
ENST00000643959.1
ENST00000645359.1
ENST00000646951.1
ENST00000647071.1
CDS CCA 72 bp CCGCAGCTCCACCCGAGAGGCCCCCAGCGTCATGGTTaGGGGCTCAGGCACCCATCCCATCTCAGGGTCCGA +
Preference number: 6 (lower is better)
Translates to: PQLHPRGPQRHG*GLRHPSHLRVR
Trigger: TCGGACCCTGAGATGGGATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCTCTCGGGTGGAGCTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 28 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557889.1
ENST00000558450.5
ENST00000558541.5
ENST00000558795.1
ENST00000558995.5
ENST00000559197.5
ENST00000559778.5
ENST00000560356.5
ENST00000560761.5
ENST00000560828.5
ENST00000560884.5
ENST00000642203.1
ENST00000642848.1
ENST00000643170.1
ENST00000643771.1
ENST00000643959.1
ENST00000644353.1
ENST00000645219.1
ENST00000645359.1
ENST00000645593.1
ENST00000645769.1
ENST00000646450.1
ENST00000646867.1
ENST00000647071.1
ENST00000647537.1
CDS GCA 72 bp CGTGGCTCCCTCCATGCTGCCCGTGGGATGCACGCATaGCACCTTCCCCCAGCAGTGGTACCAAGCCTCGGG +
Preference number: 6 (lower is better)
Translates to: RGSLHAARGMHA*HLPPAVVPSLG
Trigger: CCCGAGGCTTGGTACCACTGCTGGGGGAAGGTGGCATGCGTGCATCCCACGGGCAGCATGGAGGGAGCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp ACACCCGCAGCTCCACCCGAGAGGCCCCCAGCGTCATaGTTGGGGGCTCAGGCACCCATCCCATCTCAGGGT +
Preference number: 6 (lower is better)
Translates to: TPAAPPERPPAS*LGAQAPIPSQG
Trigger: ACCCTGAGATGGGATGGGTGCCTGAGCCCCCAACCATGACGCTGGGGGCCTCTCGGGTGGAGCTGCGGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 28 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557889.1
ENST00000558450.5
ENST00000558541.5
ENST00000558795.1
ENST00000558995.5
ENST00000559197.5
ENST00000559778.5
ENST00000560356.5
ENST00000560761.5
ENST00000560828.5
ENST00000560884.5
ENST00000642203.1
ENST00000642848.1
ENST00000643170.1
ENST00000643771.1
ENST00000643959.1
ENST00000644353.1
ENST00000645219.1
ENST00000645359.1
ENST00000645593.1
ENST00000645769.1
ENST00000646450.1
ENST00000646867.1
ENST00000647071.1
ENST00000647537.1
CDS CCA 72 bp GAGTACTTCGTGGCTTGGCCGGTGCTCTGCTCCCGCTaGGCCGGCTCAGCCACACGGTTGATGATGGGGGCC +
Preference number: 6 (lower is better)
Translates to: EYFVAWPVLCSR*AGSATRLMMGA
Trigger: GGCCCCCATCATCAACCGTGTGGCTGAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557829.1
ENST00000558995.5
ENST00000643170.1
ENST00000643959.1
ENST00000645359.1
ENST00000646951.1
ENST00000647071.1
CDS GCA 72 bp AGCAGCACCGAGTACTTCGTGGCTTGGCCGGTGCTCTaGTCCCGCTGGGCCGGCTCAGCCACACGGTTGATG +
Preference number: 6 (lower is better)
Translates to: SSTEYFVAWPVL*SRWAGSATRLM
Trigger: CATCAACCGTGTGGCTGAGCCGGCCCAGCGGGAGCAGAGCACCGGCCAAGCCACGAAGTACTCGGTGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557829.1
ENST00000558995.5
ENST00000643170.1
ENST00000643959.1
ENST00000645359.1
ENST00000646951.1
ENST00000647071.1
CDS CCA 72 bp CTCTCTGCGGGCTCCAGGAGATGTTGTTATGGAGACTaGGCCAAGCTGGGCTGGGCTGGGGCTGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LSAGSRRCCYGD*AKLGWAGAGLG
Trigger: CCCCAGCCCAGCCCCAGCCCAGCCCAGCTTGGCCCAGTCTCCATAACAACATCTCCTGGAGCCCGCAGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp CTGGAACAGGAGCGAAGCACCTCTGTGCGCTCTACCTaGGCTCTCGGTCGGGGGCTCCTCTCTCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: LEQERSTSVRST*ALGRGLLSPAL
Trigger: GAGAGCCGGAGAGAGGAGCCCCCGACCGAGAGCCCAGGTAGAGCGCACAGAGGTGCTTCGCTCCTGTTCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558859.5
ENST00000560092.5
ENST00000644346.1
ENST00000646373.1
CDS TCA 72 bp CCACTCCTTTGGAAGCCCCAGGACTCACTGAGAGGCTaGGGGAGTGTCGGTCCGGAGGGAGGCAGTCACGGG +
Preference number: 6 (lower is better)
Translates to: PLLWKPQDSLRG*GSVGPEGGSHG
Trigger: CCCGTGACTGCCTCCCTCCGGACCGACACTCCCTCAGCCTCTCAGTGAGTCCTGGGGCTTCCAAAGGAGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS GCA 72 bp AGCGACAGGATTTTTGGGGAGTCGTGGCTCCCTCCATaGTGCCCGTGGGATGCACGCATGCCACCTTCCCCC +
Preference number: 6 (lower is better)
Translates to: SDRIFGESWLPP*CPWDARMPPSP
Trigger: GGGGGAAGGTGGCATGCGTGCATCCCACGGGCAGCATGGAGGGAGCCACGACTCCCCAAAAATCCTGTCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS GCA 72 bp AGAAGACAGGGCTGGAACAGGAGCGAAGCACCTCTGTaGGCTCTACCTGGGCTCTCGGTCGGGGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: RRQGWNRSEAPL*ALPGLSVGGSS
Trigger: AGAGGAGCCCCCGACCGAGAGCCCAGGTAGAGCGCACAGAGGTGCTTCGCTCCTGTTCCAGCCCTGTCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000558859.5
ENST00000560092.5
ENST00000644346.1
ENST00000646373.1
CDS CCA 72 bp AGTGGGAGAGTTGGATGGTCCCTTGGCAGGGAGAGTTaGGTGCAGATGCTGGGCCTCGGCCCTGGAAGCCTC +
Preference number: 6 (lower is better)
Translates to: SGRVGWSLGRES*VQMLGLGPGSL
Trigger: GAGGCTTCCAGGGCCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CCA 72 bp GGCACACCTGGTCCAAGAGGTGGAGGCATTGGTCACTaGAGTCACGAGGGTCAGGACAGGCACCTGGGAGGG +
Preference number: 6 (lower is better)
Translates to: GTPGPRGGGIGH*SHEGQDRHLGG
Trigger: CCCTCCCAGGTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS CCA 72 bp CCCAGGGGGCACACCTGGTCCAAGAGGTGGAGGCATTaGTCACTGGAGTCACGAGGGTCAGGACAGGCACCT +
Preference number: 6 (lower is better)
Translates to: PRGHTWSKRWRH*SLESRGSGQAP
Trigger: AGGTGCCTGTCCTGACCCTCGTGACTCCAGTGACCAATGCCTCCACCTCTTGGACCAGGTGTGCCCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS CAA 72 bp GCAGGGCTGGGATCTCTCTGCGGGCTCCAGGAGATGTaGTTATGGAGACTGGGCCAAGCTGGGCTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: AGLGSLCGLQEM*LWRLGQAGLGW
Trigger: CCAGCCCAGCCCAGCTTGGCCCAGTCTCCATAACAACATCTCCTGGAGCCCGCAGAGAGATCCCAGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS GCA 72 bp CCTCCTTCCCTAGACCCTGGGGCCTCACGGACCTCCTaGTTCCTCAGCTTCACCAGAGTTCTGAGCAGGGGA +
Preference number: 6 (lower is better)
Translates to: PPSLDPGASRTS*FLSFTRVLSRG
Trigger: TCCCCTGCTCAGAACTCTGGTGAAGCTGAGGAAGCAGGAGGTCCGTGAGGCCCCAGGGTCTAGGGAAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp TCCCGACTGGTGTTGTGCCAGCGCTGCACTCAGTCTTaGCACGAGGGAGCTAAACTAGGGCAAGGGGGTGGG +
Preference number: 6 (lower is better)
Translates to: SRLVLCQRCTQS*HEGAKLGQGGG
Trigger: CCCACCCCCTTGCCCTAGTTTAGCTCCCTCGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp TGCTCAGAAGCCCTGTGCTGCTGGCCTAGGTATGCGTaGATGGGGCTGGAGAGGGCTGAAGGATTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: CSEALCCWPRYA*MGLERAEGLGW
Trigger: CCACCCCAATCCTTCAGCCCTCTCCAGCCCCATCCACGCATACCTAGGCCAGCAGCACAGGGCTTCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 72 bp TGGCAGCACTGGCACCGTCTCTTAGCGACAGGATTTTaGGGGAGTCGTGGCTCCCTCCATGCTGCCCGTGGG +
Preference number: 6 (lower is better)
Translates to: WQHWHRLLATGF*GSRGSLHAARG
Trigger: CCCACGGGCAGCATGGAGGGAGCCACGACTCCCCAAAAATCCTGTCGCTAAGAGACGGTGCCAGTGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS TCA 72 bp TGCGAGTCTCAGCCATGTCGCTCACCACACCGTCAGTaGGCACCAGCAGCACCGAGTACTTCGTGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: CESQPCRSPHRQ*APAAPSTSWLG
Trigger: GCCAAGCCACGAAGTACTCGGTGCTGCTGGTGCTCACTGACGGTGTGGTGAGCGACATGGCTGAGACTCGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000557829.1
ENST00000558995.5
ENST00000643170.1
ENST00000643959.1
ENST00000645359.1
ENST00000646951.1
ENST00000647071.1
CDS GCA 72 bp GTGGTACCAAGCCTCGGGCTGAAGCAGGCAGGGGTATaGCGGCCAGAGTTCATGGCCGGTCAGTCCATCTAT +
Preference number: 6 (lower is better)
Translates to: VVPSLGLKQAGV*RPEFMAGQSIY
Trigger: ATAGATGGACTGACCGGCCATGAACTCTGGCCGGCATACCCCTGCCTGCTTCAGCCCGAGGCTTGGTACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp GCACCGTCTCTTAGCGACAGGATTTTTGGGGAGTCGTaGCTCCCTCCATGCTGCCCGTGGGATGCACGCATG +
Preference number: 6 (lower is better)
Translates to: APSLSDRIFGES*LPPCCPWDARM
Trigger: CATGCGTGCATCCCACGGGCAGCATGGAGGGAGCCACGACTCCCCAAAAATCCTGTCGCTAAGAGACGGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp TGCAGTGGGCAGGAGACAGGTTGGAAAGTCCCCTGCTaGGCTATCCCTATCCACTCCCTACCCCCATTCCCC +
Preference number: 6 (lower is better)
Translates to: CSGQETGWKVPC*AIPIHSLPPFP
Trigger: GGGGAATGGGGGTAGGGAGTGGATAGGGATAGCCCAGCAGGGGACTTTCCAACCTGTCTCCTGCCCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp GATGGTCCCTTGGCAGGGAGAGTTGGGTGCAGATGCTaGGCCTCGGCCCTGGAAGCCTCACCTGATAAAGAC +
Preference number: 6 (lower is better)
Translates to: DGPLAGRVGCRC*ASALEASPDKD
Trigger: GTCTTTATCAGGTGAGGCTTCCAGGGCCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CAA 72 bp GCCGCCTCAGCACCTTCTGCTATTTCCCGACTGGTGTaGTGCCAGCGCTGCACTCAGTCTTGGCACGAGGGA +
Preference number: 6 (lower is better)
Translates to: AASAPSAISRLV*CQRCTQSWHEG
Trigger: TCCCTCGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 90 bp CACACTTCTTGGCAGCACTGGCACCGTCTCTTAGCGACAGGATTTTaGGGGAGTCGTGGCTCCCTCCATGCTGCCCGTGGGATGCACGCA +
Preference number: 6 (lower is better)
Translates to: HTSWQHWHRLLATGF*GSRGSLHAARGMHA
Trigger: TGCGTGCATCCCACGGGCAGCATGGAGGGAGCCACGACTCCCCAAAAATCCTGTCGCTAAGAGACGGTGCCAGTGCTGCCAAGAAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 90 bp GAGGATGGGTCTCAGAAGTGGAGTCTGCAGTGGGCAGGAGACAGGTaGGAAAGTCCCCTGCTGGGCTATCCCTATCCACTCCCTACCCCC +
Preference number: 6 (lower is better)
Translates to: EDGSQKWSLQWAGDR*ESPLLGYPYPLPTP
Trigger: GGGGGTAGGGAGTGGATAGGGATAGCCCAGCAGGGGACTTTCCAACCTGTCTCCTGCCCACTGCAGACTCCACTTCTGAGACCCATCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS TCA 72 bp CTGGGTGGGGGTGGGAAGAAGGTCATGCTGCAACCATaGGAGCCACCAGATTGCCTAGGCCAGAGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: LGGGGKKVMLQP*EPPDCLGQSWD
Trigger: ATCCCAGCTCTGGCCTAGGCAATCTGGTGGCTCTCATGGTTGCAGCATGACCTTCTTCCCACCCCCACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS GCA 72 bp CACTGCATCTCCTGCCCAGGGTTTGCCGTCCCTTCCTaGATCTCCTGGAAAGTGCTGGTGAACTCGCCGATG +
Preference number: 6 (lower is better)
Translates to: HCISCPGFAVPS*ISWKVLVNSPM
Trigger: CATCGGCGAGTTCACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGATGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000558995.5
ENST00000559207.1
ENST00000643170.1
ENST00000645359.1
ENST00000647071.1
ENST00000647147.1
CDS GCA 72 bp GTCTGCAGTGGGCAGGAGACAGGTTGGAAAGTCCCCTaGTGGGCTATCCCTATCCACTCCCTACCCCCATTC +
Preference number: 6 (lower is better)
Translates to: VCSGQETGWKVP*WAIPIHSLPPF
Trigger: GAATGGGGGTAGGGAGTGGATAGGGATAGCCCAGCAGGGGACTTTCCAACCTGTCTCCTGCCCACTGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS GCA 72 bp GCCTCAGCACCTTCTGCTATTTCCCGACTGGTGTTGTaGCAGCGCTGCACTCAGTCTTGGCACGAGGGAGCT +
Preference number: 6 (lower is better)
Translates to: ASAPSAISRLVL*QRCTQSWHEGA
Trigger: AGCTCCCTCGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS GCA 72 bp AGAAAAAGCTGTGGAATCCGTTGGGCAAGGCCTCCCTaGCTGTTCCCTCCCGCCCCACTCTCTCCTACCTGT +
Preference number: 6 (lower is better)
Translates to: RKSCGIRWARPP*LFPPAPLSPTC
Trigger: ACAGGTAGGAGAGAGTGGGGCGGGAGGGAACAGGCAGGGAGGCCTTGCCCAACGGATTCCACAGCTTTTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000557829.1
ENST00000643959.1
ENST00000646951.1
CDS GCA 72 bp TTGGATGGTCCCTTGGCAGGGAGAGTTGGGTGCAGATaGTGGGCCTCGGCCCTGGAAGCCTCACCTGATAAA +
Preference number: 6 (lower is better)
Translates to: LDGPLAGRVGCR*WASALEASPDK
Trigger: TTTATCAGGTGAGGCTTCCAGGGCCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CCA 72 bp AATACTCAAGGGCCAGCACCCGGGAGAAGACAGGGCTaGAACAGGAGCGAAGCACCTCTGTGCGCTCTACCT +
Preference number: 6 (lower is better)
Translates to: NTQGPAPGRRQG*NRSEAPLCALP
Trigger: AGGTAGAGCGCACAGAGGTGCTTCGCTCCTGTTCCAGCCCTGTCTTCTCCCGGGTGCTGGCCCTTGAGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000397016.6
ENST00000460657.1
ENST00000537691.5
ENST00000558450.5
ENST00000558541.5
ENST00000558859.5
ENST00000558995.5
ENST00000559197.5
ENST00000559778.5
ENST00000560092.5
ENST00000560356.5
ENST00000560761.5
ENST00000560828.5
ENST00000560884.5
ENST00000642203.1
ENST00000643170.1
ENST00000643771.1
ENST00000643959.1
ENST00000644346.1
ENST00000644353.1
ENST00000645219.1
ENST00000645359.1
ENST00000645593.1
ENST00000645769.1
ENST00000646373.1
ENST00000646450.1
ENST00000646867.1
ENST00000647071.1
CDS CAA 90 bp TTCATTAAGCAGTGGGAGAGTTGGATGGTCCCTTGGCAGGGAGAGTaGGGTGCAGATGCTGGGCCTCGGCCCTGGAAGCCTCACCTGATA +
Preference number: 6 (lower is better)
Translates to: FIKQWESWMVPWQGE*GADAGPRPWKPHLI
Trigger: TATCAGGTGAGGCTTCCAGGGCCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCCCACTGCTTAATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CAA 90 bp GCTGGCGCCGGCTCCAGCTCCGGCTCTGCTGCTATTTATGGGGCCTaGCTGAACGTCATAGCTTTGAGAATGATGTCCAGTTCCCTAGCC +
Preference number: 6 (lower is better)
Translates to: AGAGSSSGSAAIYGA*LNVIALRMMSSSLA
Trigger: GGCTAGGGAACTGGACATCATTCTCAAAGCTATGACGTTCAGCAAGGCCCCATAAATAGCAGCAGAGCCGGAGCTGGAGCCGGCGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558450.5
ENST00000646867.1
CDS TCA 72 bp GTGAGGCTGTCTGATCCCATGTCATGCTTCCCCGAGTaGGTGTGCATTGGTGTGTCTGAGTGCCCCACCCTC +
Preference number: 6 (lower is better)
Translates to: VRLSDPMSCFPE*VCIGVSECPTL
Trigger: GAGGGTGGGGCACTCAGACACACCAATGCACACTCACTCGGGGAAGCATGACATGGGATCAGACAGCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp TTTCTGCCGCCTCAGCACCTTCTGCTATTTCCCGACTaGTGTTGTGCCAGCGCTGCACTCAGTCTTGGCACG +
Preference number: 6 (lower is better)
Translates to: FLPPQHLLLFPD*CCASAALSLGT
Trigger: CGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp TCCTTCATTAAGCAGTGGGAGAGTTGGATGGTCCCTTaGCAGGGAGAGTTGGGTGCAGATGCTGGGCCTCGG +
Preference number: 6 (lower is better)
Translates to: SFIKQWESWMVP*QGELGADAGPR
Trigger: CCGAGGCCCAGCATCTGCACCCAACTCTCCCTGCCAAGGGACCATCCAACTCTCCCACTGCTTAATGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CAA 90 bp GTCAGACTTGCTGAACAGATCCTGAAGATACAGGAGAAAGGGCCCTaGAGGTTGGTGAGAGCTGCAAGGAGGGTGGGGGATGGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: VRLAEQILKIQEKGP*RLVRAARRVGDGLP
Trigger: TGGGAGCCCATCCCCCACCCTCCTTGCAGCTCTCACCAACCTCAAGGGCCCTTTCTCCTGTATCTTCAGGATCTGTTCAGCAAGTCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS GCA 72 bp GTTGATACAGTCCCACTGCATCTCCTGCCCAGGGTTTaGCGTCCCTTCCTGCATCTCCTGGAAAGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: VDTVPLHLLPRV*RPFLHLLESAG
Trigger: ACCAGCACTTTCCAGGAGATGCAGGAAGGGACGGCAAACCCTGGGCAGGAGATGCAGTGGGACTGTATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000558995.5
ENST00000559207.1
ENST00000643170.1
ENST00000645359.1
ENST00000647071.1
ENST00000647147.1
CDS GCA 72 bp CCTTCTGCTATTTCCCGACTGGTGTTGTGCCAGCGCTaGACTCAGTCTTGGCACGAGGGAGCTAAACTAGGG +
Preference number: 6 (lower is better)
Translates to: PSAISRLVLCQR*TQSWHEGAKLG
Trigger: CCCTAGTTTAGCTCCCTCGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp CTGGAGAGGGCTGAAGGATTGGGGTGGGGATGTTCCTaGCAGTCTTGGCTCCTAGGCCATCGATTGATCTAC +
Preference number: 6 (lower is better)
Translates to: LERAEGLGWGCS*QSWLLGHRLIY
Trigger: GTAGATCAATCGATGGCCTAGGAGCCAAGACTGCCAGGAACATCCCCACCCCAATCCTTCAGCCCTCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 90 bp ACACTTTCTGCCGCCTCAGCACCTTCTGCTATTTCCCGACTGGTGTaGTGCCAGCGCTGCACTCAGTCTTGGCACGAGGGAGCTAAACTA +
Preference number: 6 (lower is better)
Translates to: TLSAASAPSAISRLV*CQRCTQSWHEGAKL
Trigger: TAGTTTAGCTCCCTCGTGCCAAGACTGAGTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 90 bp TTGGGGTGGGGATGTTCCTGGCAGTCTTGGCTCCTAGGCCATCGATaGATCTACACTTTCTGCCGCCTCAGCACCTTCTGCTATTTCCCG +
Preference number: 6 (lower is better)
Translates to: LGWGCSWQSWLLGHR*IYTFCRLSTFCYFP
Trigger: CGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAAGTGTAGATCAATCGATGGCCTAGGAGCCAAGACTGCCAGGAACATCCCCACCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS TCA 72 bp CTTGACACACACAGGCGCCAGTACATAAACTCACTGTaGCACCACGACAGTTACAGCCCCCGGCGGATACAC +
Preference number: 6 (lower is better)
Translates to: LDTHRRQYINSL*HHDSYSPRRIH
Trigger: GTGTATCCGCCGGGGGCTGTAACTGTCGTGGTGTCACAGTGAGTTTATGTACTGGCGCCTGTGTGTGTCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000558995.5
ENST00000643170.1
CDS GCA 72 bp CGATTGATCTACACTTTCTGCCGCCTCAGCACCTTCTaGTATTTCCCGACTGGTGTTGTGCCAGCGCTGCAC +
Preference number: 6 (lower is better)
Translates to: RLIYTFCRLSTF*YFPTGVVPALH
Trigger: GTGCAGCGCTGGCACAACACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAAGTGTAGATCAATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp AATAATGGCTTAGTGACCTTGGTTTGTGACACAATCTaGGCTCTCGGTCGGGGGCTCCTCTCTCCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: NNGLVTLVCDTI*ALGRGLLSPAL
Trigger: GAGAGCCGGAGAGAGGAGCCCCCGACCGAGAGCCCAGATTGTGTCACAAACCAAGGTCACTAAGCCATTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559207.1
ENST00000647147.1
CDS CCA 72 bp TGGCGCCGGCTCCAGCTCCGGCTCTGCTGCTATTTATaGGGCCCCTTCTCACATCACTTTCAACATTGTTAC +
Preference number: 6 (lower is better)
Translates to: WRRLQLRLCCYL*GPFSHHFQHCY
Trigger: GTAACAATGTTGAAAGTGATGTGAGAAGGGGCCCCATAAATAGCAGCAGAGCCGGAGCTGGAGCCGGCGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000560761.5
ENST00000643771.1
CDS CCA 72 bp TGGCGCCGGCTCCAGCTCCGGCTCTGCTGCTATTTATaGGGCCTTGCTGAACGTCATAGCTTTGAGAATGAT +
Preference number: 6 (lower is better)
Translates to: WRRLQLRLCCYL*GLAERHSFEND
Trigger: ATCATTCTCAAAGCTATGACGTTCAGCAAGGCCCCATAAATAGCAGCAGAGCCGGAGCTGGAGCCGGCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558450.5
ENST00000646867.1
CDS CAA 72 bp CCTGATACCTCCTCGGCCACGATCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTCTTCAGCAATAATGGC +
Preference number: 6 (lower is better)
Translates to: PDTSSATIVMVD*PAVFPFFSNNG
Trigger: GCCATTATTGCTGAAGAATGGGAAGACTGCGGGCAAGTCCACCATCACGATCGTGGCCGAGGAGGTATCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000558541.5
ENST00000559207.1
ENST00000560761.5
ENST00000643771.1
ENST00000645359.1
ENST00000646450.1
ENST00000647071.1
ENST00000647147.1
CDS CAA 72 bp GGATGTTCCTGGCAGTCTTGGCTCCTAGGCCATCGATaGATCTACACTTTCTGCCGCCTCAGCACCTTCTGC +
Preference number: 6 (lower is better)
Translates to: GCSWQSWLLGHR*IYTFCRLSTFC
Trigger: GCAGAAGGTGCTGAGGCGGCAGAAAGTGTAGATCAATCGATGGCCTAGGAGCCAAGACTGCCAGGAACATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS TCA 72 bp GGCTCTGAAGGTGAGTTGCACATAGTCGTTTGTGCCTaGTACCTCCTCGGCCACGATCGTGATGGTGGACTT +
Preference number: 6 (lower is better)
Translates to: GSEGELHIVVCA*YLLGHDRDGGL
Trigger: AAGTCCACCATCACGATCGTGGCCGAGGAGGTATCAGGCACAAACGACTATGTGCAACTCACCTTCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397016.6
ENST00000537691.5
ENST00000558541.5
ENST00000559207.1
ENST00000645359.1
ENST00000646450.1
ENST00000647071.1
ENST00000647147.1
CDS CCA 72 bp GCTGAAGGATTGGGGTGGGGATGTTCCTGGCAGTCTTaGCTCCTAGGCCATCGATTGATCTACACTTTCTGC +
Preference number: 6 (lower is better)
Translates to: AEGLGWGCSWQS*LLGHRLIYTFC
Trigger: GCAGAAAGTGTAGATCAATCGATGGCCTAGGAGCCAAGACTGCCAGGAACATCCCCACCCCAATCCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CCA 72 bp AAGCTGACAATGCGAAGGCTCATGAGCAGCCCAAGTTaGGGCAGTGGAGATTCTGGGCTCCTTCCTTTCACT +
Preference number: 6 (lower is better)
Translates to: KLTMRRLMSSPS*GSGDSGLLPFT
Trigger: AGTGAAAGGAAGGAGCCCAGAATCTCCACTGCCCCAACTTGGGCTGCTCATGAGCCTTCGCATTGTCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS CCA 72 bp GCAGGACATCAAATGGTGGAAGACGAAGGTCAGATTTaGGGGGATGAGAAGCTGAGGAGTCCTTCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: AGHQMVEDEGQI*GDEKLRSPSAG
Trigger: TCCGGCTGAAGGACTCCTCAGCTTCTCATCCCCCCAAATCTGACCTTCGTCTTCCACCATTTGATGTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS CCA 72 bp CATAAGCACTCTCTTCTACACTACACCCAGCCTAGTTaGGCTCTACCAAGCCCCACTTTGCACCCCCTGTGT +
Preference number: 6 (lower is better)
Translates to: HKHSLLHYTQPS*ALPSPTLHPLC
Trigger: ACACAGGGGGTGCAAAGTGGGGCTTGGTAGAGCCCAACTAGGCTGGGTGTAGTGTAGAAGAGAGTGCTTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000557829.1
ENST00000646951.1
CDS CAA 90 bp TTGCCCGCAGTCTTCCCATTCTTCAGCAATAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGGGCTCTCGGTCGGGGGCTCCTCTCT +
Preference number: 6 (lower is better)
Translates to: LPAVFPFFSNNGLVT*VCDTIWALGRGLLS
Trigger: AGAGAGGAGCCCCCGACCGAGAGCCCAGATTGTGTCACAAACCAAGGTCACTAAGCCATTATTGCTGAAGAATGGGAAGACTGCGGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559207.1
ENST00000647147.1
CDS GCA 72 bp TCTTGGCTCCTAGGCCATCGATTGATCTACACTTTCTaGCGCCTCAGCACCTTCTGCTATTTCCCGACTGGT +
Preference number: 6 (lower is better)
Translates to: SWLLGHRLIYTF*RLSTFCYFPTG
Trigger: ACCAGTCGGGAAATAGCAGAAGGTGCTGAGGCGGCAGAAAGTGTAGATCAATCGATGGCCTAGGAGCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 72 bp GGGTCAGACTTGCTGAACAGATCCGTGATGGTGGACTaGCCCGCAGTCTTCCCATTCTTCAGCAATAATGGC +
Preference number: 6 (lower is better)
Translates to: GSDLLNRSVMVD*PAVFPFFSNNG
Trigger: GCCATTATTGCTGAAGAATGGGAAGACTGCGGGCAAGTCCACCATCACGGATCTGTTCAGCAAGTCTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560828.5
ENST00000645593.1
CDS CAA 72 bp GGCTCCAGCTCCGGCTCTGCTGCTATTTATGGGGCCTaGCTGAACGTCATAGCTTTGAGAATGATGTCCAGT +
Preference number: 6 (lower is better)
Translates to: GSSSGSAAIYGA*LNVIALRMMSS
Trigger: ACTGGACATCATTCTCAAAGCTATGACGTTCAGCAAGGCCCCATAAATAGCAGCAGAGCCGGAGCTGGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558450.5
ENST00000646867.1
CDS CAA 90 bp CCCCTTCACACTACACCCACACCCAGAATCGCAGAGATGCGCACATaGCAGTGGCATGCACATACACATTCAAACAGAGAAATGATGGCG +
Preference number: 6 (lower is better)
Translates to: PLHTTPTPRIAEMRT*QWHAHTHSNREMMA
Trigger: CGCCATCATTTCTCTGTTTGAATGTGTATGTGCATGCCACTGCAATGTGCGCATCTCTGCGATTCTGGGTGTGGGTGTAGTGTGAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000557889.1
ENST00000558995.5
ENST00000643170.1
ENST00000647537.1
CDS TCA 72 bp CTGACACTCCTTAAAGCAAGGAAATGCTTCCAGGTCTaGGGACTGCCCTCCCCTCGAGTTCCTTCATTAAGC +
Preference number: 6 (lower is better)
Translates to: LTLLKARKCFQV*GLPSPRVPSLS
Trigger: GCTTAATGAAGGAACTCGAGGGGAGGGCAGTCCTCAGACCTGGAAGCATTTCCTTGCTTTAAGGAGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460657.1
ENST00000560845.1
ENST00000643959.1
ENST00000644012.1
CDS CCA 72 bp GTTGTTCTTCACCACCTTGGAGAGGCACCAGGTGGCTaGTCAGCTCCTGTCTGTGTCTTCTTACTTTACTCT +
Preference number: 6 (lower is better)
Translates to: VVLHHLGEAPGG*SAPVCVFLLYS
Trigger: AGAGTAAAGTAAGAAGACACAGACAGGAGCTGACCAGCCACCTGGTGCCTCTCCAAGGTGGTGAAGAACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 72 bp GTCTTCCCATTCTTCAGCAATAATGGCTTAGTGACCTaGGTTTGTGACACAATCTGGGCTCTCGGTCGGGGG +
Preference number: 6 (lower is better)
Translates to: VFPFFSNNGLVT*VCDTIWALGRG
Trigger: CCCCCGACCGAGAGCCCAGATTGTGTCACAAACCAAGGTCACTAAGCCATTATTGCTGAAGAATGGGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559207.1
ENST00000647147.1
CDS CAA 90 bp ATAGCCCCAGGCACCAACCTCAGTTCTCCAGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATAGATTTCCATGAAAGGGTCAGACTT +
Preference number: 6 (lower is better)
Translates to: IAPGTNLSSPDQLIT*VLVGLIDFHERVRL
Trigger: AAGTCTGACCCTTTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTTGGTGCCTGGGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 90 bp ACTCACTGTGACACCACGACAGTTACAGCCCCCGGCGGATACACATaGGGAAACATACCCCTTCTCACATCACTTTCAACATTGTTACAC +
Preference number: 6 (lower is better)
Translates to: THCDTTTVTAPGGYT*GNIPLLTSLSTLLH
Trigger: GTGTAACAATGTTGAAAGTGATGTGAGAAGGGGTATGTTTCCCAATGTGTATCCGCCGGGGGCTGTAACTGTCGTGGTGTCACAGTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000558995.5
ENST00000643170.1
CDS CAA 72 bp GGCACCAACCTCAGTTCTCCAGACCAGCTGATCACTTaGGTCCTCGTTGGTCTTATAGATTTCCATGAAAGG +
Preference number: 6 (lower is better)
Translates to: GTNLSSPDQLIT*VLVGLIDFHER
Trigger: CCTTTCATGGAAATCTATAAGACCAACGAGGACCAAAGTGATCAGCTGGTCTGGAGAACTGAGGTTGGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460657.1
ENST00000643959.1
CDS CAA 90 bp GCTAAGGATATCTGCAGTCACATATACAGGAACACTGGGCTGTCCTaGTCACACATGTACTCACTCAAACTAACCCGGAATACAGCAGGA +
Preference number: 6 (lower is better)
Translates to: AKDICSHIYRNTGLS*SHMYSLKLTRNTAG
Trigger: TCCTGCTGTATTCCGGGTTAGTTTGAGTGAGTACATGTGTGACAAGGACAGCCCAGTGTTCCTGTATATGTGACTGCAGATATCCTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558995.5
ENST00000643170.1
CDS CAA 72 bp ATCTGCAGTCACATATACAGGAACACTGGGCTGTCCTaGTCACACATGTACTCACTCAAACTAACCCGGAAT +
Preference number: 6 (lower is better)
Translates to: ICSHIYRNTGLS*SHMYSLKLTRN
Trigger: ATTCCGGGTTAGTTTGAGTGAGTACATGTGTGACAAGGACAGCCCAGTGTTCCTGTATATGTGACTGCAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558995.5
ENST00000559778.5
ENST00000643170.1
ENST00000645769.1
CDS CAA 72 bp GCTGCTATTTATGGGGCCTTGCTGAACGTCATAGCTTaGAGAATGATGTCCAGTTCCCTAGCCACCATTTTA +
Preference number: 6 (lower is better)
Translates to: AAIYGALLNVIA*RMMSSSLATIL
Trigger: TAAAATGGTGGCTAGGGAACTGGACATCATTCTCAAAGCTATGACGTTCAGCAAGGCCCCATAAATAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000558450.5
ENST00000646867.1
CDS GCA 72 bp ATCACTTTCAACATTGTTACACTAGCTAAGGATATCTaGAGTCACATATACAGGAACACTGGGCTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: ITFNIVTLAKDI*SHIYRNTGLSL
Trigger: CAAGGACAGCCCAGTGTTCCTGTATATGTGACTGCAGATATCCTTAGCTAGTGTAACAATGTTGAAAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000558995.5
ENST00000559778.5
ENST00000643170.1
ENST00000645769.1