RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPNE4 (Homo sapiens)

Ensembl gene IDs: ENSG00000196353

Ensembl transcript IDs: ENST00000429747.5, ENST00000429747.6, ENST00000502818.5, ENST00000503204.1, ENST00000505331.1, ENST00000505881.5, ENST00000505957.1, ENST00000506687.5, ENST00000511604.5, ENST00000512055.5, ENST00000512332.5, ENST00000514439.1, ENST00000514999.5, ENST00000515418.1, ENST00000617767.4

Found 374 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTGCAGCTTCTGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTaGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCA +
Preference number: 1 (lower is better)
Translates to: CAASGVSLITFYCHL*RQAGLLCYCQEEVP
Trigger: TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCAGAAGCTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR GCA 90 bp CTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTaGTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCC +
Preference number: 1 (lower is better)
Translates to: LITFYCHLWRQAGLL*YCQEEVPFSSRLEA
Trigger: GGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR TCA 90 bp TCTTATCTAAGGAAGAGGTGTGAGTATAAAGCAGCGAGACTGATTTaGGGTGTGCAGCTTCTGGAGTCAGTCTCATTACTTTCTACTGTC +
Preference number: 1 (lower is better)
Translates to: SYLRKRCEYKAARLI*GVQLLESVSLLSTV
Trigger: GACAGTAGAAAGTAATGAGACTGACTCCAGAAGCTGCACACCTCAAATCAGTCTCGCTGCTTTATACTCACACCTCTTCCTTAGATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR TCA 90 bp AAGATGCAGAATCTTGGGTCCCACACAGACCTATGTATCACAATCTaGATTTTAATAAGACTCTCAGGTGATTTGTGTACACAGTATAAA +
Preference number: 1 (lower is better)
Translates to: KMQNLGSHTDLCITI*ILIRLSGDLCTQYK
Trigger: TTTATACTGTGTACACAAATCACCTGAGAGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTCTGCATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR GCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGACAGGCAGGACTTTTGTaGTACTGTCAGGAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGQAGLL*YCQEEV
Trigger: CACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTG...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR TCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAGGTGCTGGGCTAGATaGCCCAGACTTACCTCAAAA +
Preference number: 2 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLRCWAR*PRLTSK
Trigger: TTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCT...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR TCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGGCAGCGAGACTGATTTaGGGTGTGCAGCTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGAARLI*GVQLLE
Trigger: CTCCAGAAGCTGCACACCTCAAATCAGTCTCGCTGC...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR TCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTAGGTGCTGGGCTAGATaGCCCAGACTTACCTCAAAA +
Preference number: 2 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFRCWAR*PRLTSK
Trigger: TTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCT...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR GCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTCAGGCAGGACTTTTGTaGTACTGTCAGGAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSQAGLL*YCQEEV
Trigger: CACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTG...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR CAA 90 bp AGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTaGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAA +
Preference number: 2 (lower is better)
Translates to: SLITFYCHLWRQAGL*CYCQEEVPFSSRLE
Trigger: TTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR TCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGGTGCTGGGCTAGATaGCCCAGACTTACCTCAAAA +
Preference number: 2 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGRCWAR*PRLTSK
Trigger: TTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCT...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR GCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGCAGGCAGGACTTTTGTaGTACTGTCAGGAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGQAGLL*YCQEEV
Trigger: CACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTG...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTGAGGTGTGCAGCTTCTaGAGTCAGTCTCATTACTTT +
Preference number: 2 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSEVCSF*SQSHYF
Trigger: AAAGTAATGAGACTGACTCCAGAAGCTGCACACCTC...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTACACCATCCATGCAGTaGTGTGTGATGCCACTTTTA +
Preference number: 2 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSTPSMQ*CVMPLL
Trigger: TAAAAGTGGCATCACACACCACTGCATGGATGGTGT...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGGAGGTGTGCAGCTTCTaGAGTCAGTCTCATTACTTT +
Preference number: 2 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGEVCSF*SQSHYF
Trigger: AAAGTAATGAGACTGACTCCAGAAGCTGCACACCTC...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGTGCATTAGCATCACCTaGGACCTAGTTAAAGATGCA +
Preference number: 2 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGCISIT*DLVKDA
Trigger: TGCATCTTTAACTAGGTCCCAGGTGATGCTAATGCA...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR TCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAATAAAGCAGCGAGACTaGTTTGAGGTGTGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLIKQRD*FEVCSF
Trigger: GAAGCTGCACACCTCAAATCAGTCTCGCTGCTTTAT...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTATTCTACTGTCACCTCTaGAGACAGGCAGGACTTTTG +
Preference number: 2 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLFYCHL*RQAGLL
Trigger: CAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAA...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CAA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAAGCAGCGAGACTGATTaGAGGTGTGCAGCTTCTGGA +
Preference number: 3 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGSSETD*RCAASG
Trigger: TCCAGAAGCTGCACACCTCAAATCAGTCTCGCTGCT...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CAA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGAAGCCACGCTGTTTTaGATGGTCTCCATCATGACA +
Preference number: 3 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFEATLF*MVSIMT
Trigger: TGTCATGATGGAGACCATCAAAAACAGCGTGGCTTC...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CAA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTGAAGCCACGCTGTTTTaGATGGTCTCCATCATGACA +
Preference number: 3 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSEATLF*MVSIMT
Trigger: TGTCATGATGGAGACCATCAAAAACAGCGTGGCTTC...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR CCA 72 bp TCTGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTaGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAA +
Preference number: 3 (lower is better)
Translates to: SGVSLITFYCHL*RQAGLLCYCQE
Trigger: TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CAA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATCCAGTGAAGACGCTTaGAGATCACTTCTAGGGATT +
Preference number: 3 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPSSEDA*RSLLGI
Trigger: AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGA...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CAA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTTCCAGTGAAGACGCTTaGAGATCACTTCTAGGGATT +
Preference number: 3 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSSSEDA*RSLLGI
Trigger: AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGA...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR TCA 72 bp AGGAAGAGGTGTGAGTATAAAGCAGCGAGACTGATTTaGGGTGTGCAGCTTCTGGAGTCAGTCTCATTACTT +
Preference number: 3 (lower is better)
Translates to: RKRCEYKAARLI*GVQLLESVSLL
Trigger: AAGTAATGAGACTGACTCCAGAAGCTGCACACCTCAAATCAGTCTCGCTGCTTTATACTCACACCTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CAA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTAGACAGGCAGGACTTTaGTGCTACTGTCAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIRQAGL*CYCQEE
Trigger: CTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCT...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR TCA 72 bp GTACACAGTATAAAGTATGAGAGGTGCTGGGCTAGATaGCCCAGACTTACCTCAAAAAGACTCACCTCAGAA +
Preference number: 3 (lower is better)
Translates to: VHSIKYERCWAR*PRLTSKRLTSE
Trigger: TTCTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACTTTATACTGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR CCA 72 bp AGCATCACCTGGGACCTAGTTAAAGATGCAGAATCTTaGGTCCCACACAGACCTATGTATCACAATCTGAAT +
Preference number: 3 (lower is better)
Translates to: SITWDLVKDAES*VPHRPMYHNLN
Trigger: ATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTCTGCATCTTTAACTAGGTCCCAGGTGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CAA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTGAAGCCACGCTGTTTTaGATGGTCTCCATCATGACA +
Preference number: 3 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIEATLF*MVSIMT
Trigger: TGTCATGATGGAGACCATCAAAAACAGCGTGGCTTC...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR-3UTR CAA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAGTACTGCATAGCCATTaGCCATGTGTAAGTTTCTAT +
Preference number: 3 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLVLHSH*PCVSFY
Trigger: ATAGAAACTTACACATGGCAAATGGCTATGCAGTAC...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
3UTR GCA 72 bp ACTCCACTTTGTGCCTTTTATGCTTGCAAAAACACTTaGCTGTTTCCCTGCAAGAAGATTATACAAGTTAAA +
Preference number: 3 (lower is better)
Translates to: TPLCAFYACKNT*LFPCKKIIQVK
Trigger: TTTAACTTGTATAATCTTCTTGCAGGGAAACAGGCAAGTGTTTTTGCAAGCATAAAAGGCACAAAGTGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGACGCGCGAGCGCCCCCTaGGGGTTGCTGACGGAGACG +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGRASAP*GLLTET
Trigger: CGTCTCCGTCAGCAACCCCCAGGGGGCGCTCGCGCG...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTACGCTCTCCGTGGTCCTaGCGCGCCCGCAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLRSPWS*RARSLG
Trigger: GCCCAGACTGCGGGCGCGGCAGGACCACGGAGAGCG...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAACGCGGGTTGATGGCCTaGCGCCCTGCTGGCCTACCG +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQERGLMA*RPAGLP
Trigger: CGGTAGGCCAGCAGGGCGGCAGGCCATCAACCCGCG...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTGGGAGGCATGGACAATaGCCTCCCGGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: FVLLSGRGAILKQTRSHAGRHGQ*PPGCRP
Trigger: TGGCCGACACCCGGGAGGCCATTGTCCATGCCTCCC...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGGGGAGGTGGGAGGCATaGACAATGGCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQGRWEA*TMASRV
Trigger: CACCCGGGAGGCCATTGTCCATGCCTCCCACCTCCC...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGATCGCGGCGCGGGTGTaGGGGGAATGGGAGTTACAC +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQIAARV*GEWELH
Trigger: GTGTAACTCCCATTCCCCCCACACCCGCGCCGCGAT...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAAACCCGGCAAGAGACTaGTTCCGAAACCTCCGCGCG +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGNPARD*FRNLRA
Trigger: CGCGCGGAGGTTTCGGAACCAGTCTCTTGCCGGGTT...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGCCCCCTGGGGGTTGCTaGCGGAGACGAGCATTGCCC +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGPPGGC*RRRALP
Trigger: GGGCAATGCTCGTCTCCGTCAGCAACCCCCAGGGGG...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGCGGGTGGCGGGGAGATaGCAGCTTCTCACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQRVAGR*QLLTER
Trigger: TCTCTCTGTGAGAAGCTGCCATCTCCCCGCCACCCG...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCAGGGAGGCATGGACAATaGCCTCCCGGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPGRHGQ*PPGCRP
Trigger: TGGCCGACACCCGGGAGGCCATTGTCCATGCCTCCC...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGATGGCAACCTTCTGGATaGTGGGGGCAATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGWQPSG*WGQCWW
Trigger: CCACCAACATTGCCCCCATCATCCAGAAGGTTGCCA...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTTCCCACGATGATGACTaGCATGGGGAGGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPSHDDD*HGEVGG
Trigger: GCCTCCCACCTCCCCATGTCAGTCATCATCGTGGGA...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAGCAGCGAGACTGATTTaGGGTGTGCAGCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGAARLI*GVQLLE
Trigger: CTCCAGAAGCTGCACACCTCAAATCAGTCTCGCTGC...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCAAGGGGACGAGCGGGTaGCGGGGAGATGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSKGTSG*RGDGSF
Trigger: GAAGCTGCCATCTCCCCGCCACCCGCTCGTCCCCTT...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCGGGAGGTGGGAGGCATaGACAATGGCCTCCCGGGTG +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSGRWEA*TMASRV
Trigger: CACCCGGGAGGCCATTGTCCATGCCTCCCACCTCCC...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTACTGACATGGGGAGGTaGGAGGCATGGACAATGGCC +
Preference number: 4 (lower is better)
Translates to: FVLLSGRGAILKQTRSHATDMGR*EAWTMA
Trigger: GGCCATTGTCCATGCCTCCCACCTCCCCATGTCAGT...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTGGCTGGGAAAGGTGCTaGGAGCAGAGTTCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPGWERC*EQSSVS
Trigger: AGAGACCGAACTCTGCTCTCAGCACCTTTCCCAGCC...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCATGCAAAATCCGGCTTTaGAGTGGAGGTGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPCKIRL*SGGGWC
Trigger: ACACCAACCACCTCCACTTCAAAGCCGGATTTTGCA...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCACTTTGTACTTGGGATTaGTGCACTCCCACTGCACCT +
Preference number: 4 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPLCTWD*CTPTAP
Trigger: AGGTGCAGTGGGAGTGCATCAATCCCAAGTACAAAG...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCATGTCAGAAATGCCTTTaGACGCCACACGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPCQKCL*TPHAAQ
Trigger: TTGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGACA...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGCAAGTGTGCACTCCATaGCACCAAGGAAGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQQVCTP*HQGSRP
Trigger: AGGCCGACTTCCTTGGTGGCATGGAGTGCACACTTG...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCAGATGACACAGGGGTCTaGTTTGGAAAGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPDDTGV*FGKGIS
Trigger: AGAGATGCCCTTTCCAAACCAGACCCCTGTGTCATC...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTAGGAACAGCTGTTCCTaGGGTCCCCGTTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPRNSCS*GPRLRQ
Trigger: CTGCCTCAAACGGGGACCCCAGGAACAGCTGTTCCT...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGTGGGGGCAATGTTGGTaGGACCGTAGAGTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQWGQCW*DRRVGA
Trigger: AGCTCCAACTCTACGGTCCCACCAACATTGCCCCCA...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGCTCCTTATACCGCCCTaGCCAAAGTCCGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQLLIPP*PKSVSF
Trigger: GAAGGACACGGACTTTGGCCAGGGCGGTATAAGGAG...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGGCCGCGCCCGCAGTCTaGGCTTTCTGCTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGAAPAV*AFCSAL
Trigger: CAAAGCTGAGCAGAAAGCCCAGACTGCGGGCGCGGC...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGTCCCACGATGATGACTaGCATGGGGAGGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGSHDDD*HGEVGG
Trigger: GCCTCCCACCTCCCCATGTCAGTCATCATCGTGGGA...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAGGCTCTCCCTTGGGTaGCCTCAGAATCCCATCATC +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLRLSLG*PQNPII
Trigger: GATGATGGGATTCTGAGGTCACCCAAGGGAGAGCCT...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTCAATCTGGCCAAGTGTaGACTCCATGCCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: FVLLSGRGAILKQTRSHAQSGQV*TPCHQG
Trigger: TCCTTGGTGGCATGGAGTGCACACTTGGCCAGATTG...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGCAATCTGGCCAAGTGTaGACTCCATGCCACCAAGGA +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQQSGQV*TPCHQG
Trigger: TCCTTGGTGGCATGGAGTGCACACTTGGCCAGATTG...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCAGCCAGCACGCTCTTTaGCAGGGCAGCTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSSQHAL*QGSWRC
Trigger: GCATCTCCAGCTGCCCTGGCAAAGAGCGTGCTGGCT...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCCAGCACGCTCTTTaGCAGGGCAGCTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGSQHAL*QGSWRC
Trigger: GCATCTCCAGCTGCCCTGGCAAAGAGCGTGCTGGCT...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTAGGAACAGCTGTTCCTaGGGTCCCCGTTTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSRNSCS*GPRLRQ
Trigger: CTGCCTCAAACGGGGACCCCAGGAACAGCTGTTCCT...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAACTCTGGAGGTATCCTaGCGCCAAACCCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLTLEVS*RQTQRQ
Trigger: CTGCCTTTGGGTTTGGCGCCAGGATACCTCCAGAGT...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTAGGAAGCTTCAGCTCTaGGTAGATTCACTCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPRKLQL*VDSLAG
Trigger: CCCGGCGAGTGAATCTACCCAGAGCTGAAGCTTCCT...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGGCCACAAAGTCACTGTaGCCCTGGTGTTCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQATKSL*PWCSQV
Trigger: AACTTGGGAACACCAGGGCCACAGTGACTTTGTGGC...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTATCTCCACTCTAGGGTaGAGCGGTCGTATCGCGGCG +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCISTLG*SGRIAA
Trigger: CGCCGCGATACGACCGCTCCACCCTAGAGTGGAGAT...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTGGTGGGGGAAGAGGGTaGAAATGTTGGAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPGGGRG*KCWRCQ
Trigger: CTGACATCTCCAACATTTTCACCCTCTTCCCCCACC...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGTGGTAGTTTTGTACTaGTGTAAGGGGCGTCGCACC +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQEVVVLY*CKGRRT
Trigger: GGTGCGACGCCCCTTACATCAGTACAAAACTACCAC...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTCCTGGGGTCCCCGTTTaGGGCAGTGAAATCTATAGC +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSPGVPV*GSEIYS
Trigger: GCTATAGATTTCACTGCCTCAAACGGGGACCCCAGG...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTCCTGGGGTCCCCGTTTaGGGCAGTGAAATCTATAGC +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSPGVPV*GSEIYS
Trigger: GCTATAGATTTCACTGCCTCAAACGGGGACCCCAGG...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGGCTTCCACAACTCCTTaGATTCCTGCACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQASTTP*IPAHSG
Trigger: CCCAGAATGTGCAGGAATTCAAGGAGTTGTGGAAGC...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTTGGCAACCTTCTGGATaGTGGGGGCAATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSWQPSG*WGQCWW
Trigger: CCACCAACATTGCCCCCATCATCCAGAAGGTTGCCA...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTGCATCTGCATGTCACTaGAGTCAGCGTTCCCTACTC +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPASACH*SQRSLL
Trigger: GAGTAGGGAACGCTGACTTCAGTGACATGCAGATGC...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGAGGTGCTGGGCTAGATaGCCCAGACTTACCTCAAAA +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQRCWAR*PRLTSK
Trigger: TTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCT...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCAGCAGCGAGACTGATTTaGGGTGTGCAGCTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPAARLI*GVQLLE
Trigger: CTCCAGAAGCTGCACACCTCAAATCAGTCTCGCTGC...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTCAAGTGTGCACTCCATaGCACCAAGGAAGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFQVCTP*HQGSRP
Trigger: AGGCCGACTTCCTTGGTGGCATGGAGTGCACACTTG...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTCAGGCAGGACTTTTGTaGTACTGTCAGGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: FVLLSGRGAILKQTRSHAQAGLL*YCQEEV
Trigger: CACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTG...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTACACAGGGGTCTGGTTTaGAAAGGGCATCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLHRGLV*KGHLCQ
Trigger: CTGACAGAGATGCCCTTTCCAAACCAGACCCCTGTG...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTACTCTGGAGGTATCCTaGCGCCAAACCCAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFTLEVS*RQTQRQ
Trigger: CTGCCTTTGGGTTTGGCGCCAGGATACCTCCAGAGT...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTAGAGACCGTGTACTCTaGAGGTATCCTGGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPRDRVL*RYPGAK
Trigger: TTTGGCGCCAGGATACCTCCAGAGTACACGGTCTCT...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTTGGGGGCAATGTTGGTaGGACCGTAGAGTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSWGQCW*DRRVGA
Trigger: AGCTCCAACTCTACGGTCCCACCAACATTGCCCCCA...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTGAACAGGCTCTCCCTTaGGTGACCTCAGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPEQALP*VTSESH
Trigger: ATGGGATTCTGAGGTCACCCAAGGGAGAGCCTGTTC...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAACAGGCTCTCCCTTaGGTGACCTCAGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQEEQALP*VTSESH
Trigger: ATGGGATTCTGAGGTCACCCAAGGGAGAGCCTGTTC...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAAACTGTCTGGCGTATaGCAGGAGCCTCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGKLSGV*QEPPPS
Trigger: GCTGGGAGGAGGCTCCTGCCATACGCCAGACAGTTT...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
3UTR CAA 72 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTaGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGL*CYCQEEVPFSS
Trigger: GCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCTTCAGCAATCACCGTaGTGGAAGATTTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPLQQSP*WKISLL
Trigger: CAGCAGGGAAATCTTCCATCACGGTGATTGCTGAAG...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTAGGCTCTCCCTTGGGTaGCCTCAGAATCCCATCATC +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCRLSLG*PQNPII
Trigger: GATGATGGGATTCTGAGGTCACCCAAGGGAGAGCCT...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAAGGTGCTGGGCTAGATaGCCCAGACTTACCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQERCWAR*PRLTSK
Trigger: TTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCT...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGATAAAGCAGCGAGACTaGTTTGAGGTGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQIKQRD*FEVCSF
Trigger: GAAGCTGCACACCTCAAATCAGTCTCGCTGCTTTAT...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGAGATTTCCACCTTCTaGCGAATCCCATGCACCCAG +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFEISTF*RIPCTQ
Trigger: CTGGGTGCATGGGATTCGTCAGAAGGTGGAAATCTC...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGAGTACACTGGGTTTATaGAGGTGCGAATCACCTCAG +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQSTLGL*RCESPQ
Trigger: CTGAGGTGATTCGCACCTGCATAAACCCAGTGTACT...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGACTGTTTCCCTTCCATTaGTCCTCTCATCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGLFPFH*SSHLLE
Trigger: TTCAAGGAGATGAGAGGAGCAATGGAAGGGAAACAG...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCAGATGAAGTATTGCGATaGCTCCTTGGTGTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPDEVLR*LLGVSF
Trigger: GAAACTAACACCAAGGAGGCATCGCAATACTTCATC...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTTCACCGTCCAGCATCTaGATGTCACTGAAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSSPSSI*MSLKSA
Trigger: CGCTGACTTCAGTGACATGCAGATGCTGGACGGTGA...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTGCAGTCTGGGCTTTCTaGTCAGCTTTGTCGCTCAAC +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSAVWAF*SALSLN
Trigger: GTTGAGCGACAAAGCTGAGCAGAAAGCCCAGACTGC...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAGACGGAGACGAGCATTaGCCCGGGAACCCGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLDGDEH*PGNPSS
Trigger: TGAGCTCGGGTTCCCGGGGCAATGCTCGTCTCCGTC...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTCACAGGGGTCTGGTTTaGAAAGGGCATCTCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSHRGLV*KGHLCQ
Trigger: CTGACAGAGATGCCCTTTCCAAACCAGACCCCTGTG...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCTCTGGGAAACAATCTaGCCAAGTGTGCACTCCATG +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPLWETI*PSVHSM
Trigger: CATGGAGTGCACACTTGGCCAGATTGTTTCCCAGAG...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAATAGCTACTGTAAACTaGATTTGGCAGCCACCCATG +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGIATVN*IWQPPM
Trigger: CATGGGTGGCTGCCAAATCCAGTTTACAGTAGCTAT...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTAGAGACCGTGTACTCTaGAGGTATCCTGGCGCCAAA +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSRDRVL*RYPGAK
Trigger: TTTGGCGCCAGGATACCTCCAGAGTACACGGTCTCT...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAGACTTGGCAACCTTCTaGATGATGGGGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLDLATF*MMGAML
Trigger: CAACATTGCCCCCATCATCCAGAAGGTTGCCAAGTC...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGACCAATTTCCGTGCATTaGATGCAAGCTCAACATAGT +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGPISVH*MQAQHS
Trigger: ACTATGTTGAGCTTGCATTCAATGCACGGAAATTGG...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTCGGTGCACCAGCTGCTaGGTTGCATCATCATTCATA +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSRCTSC*VASSFI
Trigger: TATGAATGATGATGCAACTCAGCAGCTGGTGCACCG...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTTCAGGATCAGCAGGATaGAGTATTGCGATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSSGSAG*SIAMPP
Trigger: AGGAGGCATCGCAATACTTCATCCTGCTGATCCTGA...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTGCATCTGCATGTCACTaGAGTCAGCGTTCCCTACTC +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCASACH*SQRSLL
Trigger: GAGTAGGGAACGCTGACTTCAGTGACATGCAGATGC...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAATCACTTCTAGGGATTaGCACCATCCATGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLITSRD*HHPCSG
Trigger: ACCACTGCATGGATGGTGTCAATCCCTAGAAGTGAT...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTACCTTTTAATGGATTCTaGGCTGCTGGGTTCTACAGC +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLPFNGF*AAGFYS
Trigger: GCTGTAGAACCCAGCAGCTCAGAATCCATTAAAAGG...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTGCTCCTGGGGACACTTaGTTTAGATCTCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSAPGDT*FRSPSA
Trigger: AGCACTTGGAGATCTAAATCAAGTGTCCCCAGGAGC...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGTCTCACCCATCAGTGTaGCAAGTGAAATCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQSHPSV*QVKSWN
Trigger: ATTCCAGGATTTCACTTGTCACACTGATGGGTGAGA...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617767.4
CDS-3UTR GCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTTGTCAGAAATGCCTTTaGACGCCACACGCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSCQKCL*TPHAAQ
Trigger: TTGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGACA...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAGATGGAAGATTTCCCTaGTGTGTTCCCATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLDGRFP*CVPMLQ
Trigger: CTGAAGCATGGGAACACAGCAGGGAAATCTTCCATC...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAGTCATCCAATTTCCGTaGATTGAATGCAAGCTCAAC +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGVIQFP*IECKLN
Trigger: GTTGAGCTTGCATTCAATGCACGGAAATTGGATGAC...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGTCACCGTCCAGCATCTaGATGTCACTGAAGTCAGCG +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGSPSSI*MSLKSA
Trigger: CGCTGACTTCAGTGACATGCAGATGCTGGACGGTGA...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTCAGGGCAGCTGGAGATaGGTGTTTGAAGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSQGSWR*VFEVPE
Trigger: TTCAGGAACTTCAAACACGCATCTCCAGCTGCCCTG...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAATATCGGGAGCTGTACTaGATAGCCATTTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQEYRELY*IAICHV
Trigger: CACATGGCAAATGGCTATGCAGTACAGCTCCCGATA...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTGCTTGCAAAAACACTTaGCTGTTTCCCTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: FVLLSGRGAILKQTRSHAACKNT*LFPCKK
Trigger: CTTCTTGCAGGGAAACAGGCAAGTGTTTTTGCAAGC...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCGCCAATCTCGAAGAGTaGAGAGAGAATTCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSANLEE*RENSAR
Trigger: CCGGGCTGAATTCTCTCTCCACTCTTCGAGATTGGC...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGATGACACAGGGGTCTaGTTTGGAAAGGGCATCTCT +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFDDTGV*FGKGIS
Trigger: AGAGATGCCCTTTCCAAACCAGACCCCTGTGTCATC...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGTTGCTGCTGATGTCATaGACTTCAAACCGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGLLLMS*TSNRRR
Trigger: GCGCCTGCGGTTTGAAGTCCATGACATCAGCAGCAA...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTTGCTGCTGATGTCATaGACTTCAAACCGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSLLLMS*TSNRRR
Trigger: GCGCCTGCGGTTTGAAGTCCATGACATCAGCAGCAA...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTATTCTACTGTCACCTCTaGAGACAGGCAGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLFYCHL*RQAGLL
Trigger: CAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAA...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTAAGTCACTGTGGCCCTaGTGTTCCCAAGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSKSLWP*CSQVAK
Trigger: CTTTGCAACTTGGGAACACCAGGGCCACAGTGACTT...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTGCCACAAAGTCACTGTaGCCCTGGTGTTCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCATKSL*PWCSQV
Trigger: AACTTGGGAACACCAGGGCCACAGTGACTTTGTGGC...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCACAGAGACAGGCGGTTTaGATGAGAATTATTCTCTTT +
Preference number: 4 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPQRQAV*MRIILF
Trigger: AAAGAGAATAATTCTCATCCAAACCGCCTGTCTCTG...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGTCAAACCACTGCCCATaGGACTGCATCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGSNHCP*DCILRM
Trigger: CATCCTCAAGATGCAGTCTCATGGGCAGTGGTTTGA...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTCTTCAGCAATCACCGTaGTGGAAGATTTCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCLQQSP*WKISLL
Trigger: CAGCAGGGAAATCTTCCATCACGGTGATTGCTGAAG...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTCTTTGTACTTGGGATTaGTGCACTCCCACTGCACCT +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCLCTWD*CTPTAP
Trigger: AGGTGCAGTGGGAGTGCATCAATCCCAAGTACAAAG...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTATTGATTGCAAAGTCATaGGAGACCGTGTACTCTGGA +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLLIAKS*ETVYSG
Trigger: TCCAGAGTACACGGTCTCTCATGACTTTGCAATCAA...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCCTTTTTCCACTGCTGTaGTCCTCTCAATGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSLFPLL*SSQCPA
Trigger: GGCTGGACATTGAGAGGATCACAGCAGTGGAAAAAG...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTCTGGGTTTATGCAGGTaGGAATCACCTCAGTCCTGT +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCLGLCR*ESPQSC
Trigger: ACAGGACTGAGGTGATTCGCACCTGCATAAACCCAG...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTGATGGAAGATTTCCCTaGTGTGTTCCCATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSDGRFP*CVPMLQ
Trigger: CTGAAGCATGGGAACACAGCAGGGAAATCTTCCATC...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATCTCCAATGAAGTCATaGTTGCCATTGGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPSPMKS*LPLESQ
Trigger: CTGGGACTCCAATGGCAAGCATGACTTCATTGGAGA...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAACTGTTTCCCTTCCATTaGTCCTCTCATCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQELFPFH*SSHLLE
Trigger: TTCAAGGAGATGAGAGGAGCAATGGAAGGGAAACAG...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAGCATCTTGTGAATCTTaGACAGATTCAGAATCACAG +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGASCES*TDSESQ
Trigger: CTGTGATTCTGAATCTGTGCAAGATTCACAAGATGC...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAACCGCTCAGTGTCTTATaGCAATATGAAAGGCATCTC +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQEPLSVL*QYERHL
Trigger: GAGATGCCTTTCATATTGGCATAAGACACTGAGCGG...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617767.4
CDS-3UTR CCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTTCCTTCAGCCCATTGTaGTTGCTGCTGATGTCATGG +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCSFSPL*LLLMSW
Trigger: CCATGACATCAGCAGCAACCACAATGGGCTGAAGGA...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAATTGGACAGCTTTCTCTaGGAAACAATCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQELDSFL*ETIWPS
Trigger: ACTTGGCCAGATTGTTTCCCAGAGAAAGCTGTCCAA...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTATAGCTACTGTAAACTaGATTTGGCAGCCACCCATG +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPIATVN*IWQPPM
Trigger: CATGGGTGGCTGCCAAATCCAGTTTACAGTAGCTAT...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCGACTTGGCAACCTTCTaGATGATGGGGGCAATGTTG +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSDLATF*MMGAML
Trigger: CAACATTGCCCCCATCATCCAGAAGGTTGCCAAGTC...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAACTGACATGGGGAGGTaGGAGGCATGGACAATGGCC +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLTDMGR*EAWTMA
Trigger: GGCCATTGTCCATGCCTCCCACCTCCCCATGTCAGT...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGTGCATTAGCATCACCTaGGACCTAGTTAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQCISIT*DLVKDA
Trigger: TGCATCTTTAACTAGGTCCCAGGTGATGCTAATGCA...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTTTCTACTGTCACCTCTaGAGACAGGCAGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFFYCHL*RQAGLL
Trigger: CAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAA...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAACACCATCCATGCAGTaGTGTGTGATGCCACTTTTA +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQETPSMQ*CVMPLL
Trigger: TAAAAGTGGCATCACACACCACTGCATGGATGGTGT...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCAAGTCACTGTGGCCCTaGTGTTCCCAAGTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSKSLWP*CSQVAK
Trigger: CTTTGCAACTTGGGAACACCAGGGCCACAGTGACTT...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTACATCGTTGAAGAGATaGGTTTCAAATCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPTSLKR*VSNPGR
Trigger: CCGACCTGGATTTGAAACCCATCTCTTCAACGATGT...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCATAAAGCAGCGAGACTaGTTTGAGGTGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSIKQRD*FEVCSF
Trigger: GAAGCTGCACACCTCAAATCAGTCTCGCTGCTTTAT...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTTTGTTGTGGTTCCAGTaGAGACGCTTTGAGATCACT +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFLLWFQ*RRFEIT
Trigger: AGTGATCTCAAAGCGTCTTCACTGGAACCACAACAA...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAATGAAATTCCATGGGTaGGTGTTACCAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLMKFHG*VLPVSG
Trigger: ACCAGAAACTGGTAACACTCACCCATGGAATTTCAT...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAATGTCTTATGCCAATATaGAAGGCATCTCACCCATCA +
Preference number: 4 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQECLMPI*KASHPS
Trigger: TGATGGGTGAGATGCCTTTCATATTGGCATAAGACA...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617767.4
CDS-3UTR GCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTCTTCATTCTGGGTGTaGCAATCTCGAAGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSSSFWV*QSRRVE
Trigger: CTCCACTCTTCGAGATTGGCACACCCAGAATGAAGA...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGCGGACTCATAAATGTTaGTCATCTTCTTCATTCTGG +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQRTHKC*SSSSFW
Trigger: CCAGAATGAAGAAGATGAGCAACATTTATGAGTCCG...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTATTTCCGTGCATTGAATaGAAGCTCAACATAGTCGTC +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLFPCIE*KLNIVV
Trigger: GACGACTATGTTGAGCTTGCATTCAATGCACGGAAA...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAGTCATCCAATTTCCGTaGATTGAATGCAAGCTCAAC +
Preference number: 4 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLVIQFP*IECKLN
Trigger: GTTGAGCTTGCATTCAATGCACGGAAATTGGATGAC...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTGGTCTGGGTCTCCGCTaGATAGAGAATTTACAGATA +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSGLGLR*IENLQI
Trigger: TATCTGTAAATTCTCTATGCAGCGGAGACCCAGACC...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTTCTCCAATGAAGTCATaGTTGCCATTGGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCSPMKS*LPLESQ
Trigger: CTGGGACTCCAATGGCAAGCATGACTTCATTGGAGA...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTGATGAAGTATTGCGATaGCTCCTTGGTGTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPDEVLR*LLGVSF
Trigger: GAAACTAACACCAAGGAGGCATCGCAATACTTCATC...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAACTTGCCTGTTTCCCTaGAAGAAGATTATACAAGTT +
Preference number: 4 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGTCLFP*KKIIQV
Trigger: AACTTGTATAATCTTCTTGCAGGGAAACAGGCAAGT...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTGCTTGCAAAAACACTTaGCTGTTTCCCTGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSACKNT*LFPCKK
Trigger: CTTCTTGCAGGGAAACAGGCAAGTGTTTTTGCAAGC...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCAGAGGTGTGCAGCTTCTaGAGTCAGTCTCATTACTTT +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPEVCSF*SQSHYF
Trigger: AAAGTAATGAGACTGACTCCAGAAGCTGCACACCTC...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGAGTGTTACCAGTTTCTaGTCCATCCTTGCTTATTTC +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQSVTSF*SILAYF
Trigger: GAAATAAGCAAGGATGGACCAGAAACTGGTAACACT...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTAGCTTTGCATTTTCCTaGAAAAGAGGTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPSFAFS*KRGWWE
Trigger: TTCCCACCAACCTCTTTTCCAGGAAAATGCAAAGCT...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512055.5
3UTR CAA 72 bp GTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTaGCCATGTGTAAGTTTCTATTGTTGTGGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VDQISGAVLHSH*PCVSFYCCGSS
Trigger: ACTGGAACCACAACAATAGAAACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.5
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTATGGGTCAGATTTACTaGAGAAATCCTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPMGQIY*RNPCHP
Trigger: TGGATGACAAGGATTTCTTCAGTAAATCTGACCCAT...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTAAAGAATGCATCTTGTaGATCTTGCACAGATTCAGA +
Preference number: 4 (lower is better)
Translates to: FVLLSGRGAILKQTRSHAKECIL*ILHRFR
Trigger: TCTGAATCTGTGCAAGATTCACAAGATGCATTCTTT...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTTTGATTGCAAAGTCATaGGAGACCGTGTACTCTGGA +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCLIAKS*ETVYSG
Trigger: TCCAGAGTACACGGTCTCTCATGACTTTGCAATCAA...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATTTCCGTGCATTGAATaGAAGCTCAACATAGTCGTC +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPFPCIE*KLNIVV
Trigger: GACGACTATGTTGAGCTTGCATTCAATGCACGGAAA...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCACACCAGCTGCTGAGTTaGATCATCATTCATACGAAA +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPHQLLS*IIIHTK
Trigger: TTTCGTATGAATGATGATGCAACTCAGCAGCTGGTG...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTCAGGCAGGACTTTTGTaGTACTGTCAGGAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIQAGLL*YCQEEV
Trigger: CACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTG...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTTTGGACAGCTTTCTCTaGGAAACAATCTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCLDSFL*ETIWPS
Trigger: ACTTGGCCAGATTGTTTCCCAGAGAAAGCTGTCCAA...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTCTTTCAGATACTCATTaGGTTGGTAAGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFLSDTH*VGKGGC
Trigger: ACATCCACCCTTACCAACCCAATGAGTATCTGAAAG...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGGTGTTGCTAATCTCTaGATCCTTCGTGTCTACAAA +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFGVANL*ILRVYK
Trigger: TTTGTAGACACGAAGGATCCAGAGATTAGCAACACC...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTATGGGTCAGATTTACTaGAGAAATCCTTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFMGQIY*RNPCHP
Trigger: TGGATGACAAGGATTTCTTCAGTAAATCTGACCCAT...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTAATTTACAGATACTTTaGATGATTTCCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSNLQIL*MISRLG
Trigger: GCCCAGCCTGGAAATCATTCAAAGTATCTGTAAATT...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTCAGAATCACAGTGCCTaGGTTCTTGTAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSQNHSA*VLVILL
Trigger: AAGAAGAATTACAAGAACTCAGGCACTGTGATTCTG...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAGCTTCCACAACTCCTTaGATTCCTGCACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLASTTP*IPAHSG
Trigger: CCCAGAATGTGCAGGAATTCAAGGAGTTGTGGAAGC...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTCTGGCCAGCTTATATTaGAACAAAACACCTCGACCC +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGILASLY*NKTPRP
Trigger: GGGTCGAGGTGTTTTGTTTCAATATAAGCTGGCCAG...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTGTGCAGATAACAAACTaGGGCCCAGAGAAATCAAAT +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCVQITN*GPEKSN
Trigger: ATTTGATTTCTCTGGGCCTCAGTTTGTTATCTGCAC...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAACATAGTCGTCATTaGCAGATAATTCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPQHSRH*QIILQQ
Trigger: TTGCTGAAGAATTATCTGGCAATGACGACTATGTTG...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTAACTCCTTGAATTCCTaGACATTCTGGGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCNSLNS*TFWVVF
Trigger: GAAGACAACCCAGAATGTGCAGGAATTCAAGGAGTT...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTTATCGGGAGCTGTACTaGATAGCCATTTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIYRELY*IAICHV
Trigger: CACATGGCAAATGGCTATGCAGTACAGCTCCCGATA...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTTTTCTGGTCCATCCTTaGTTATTTCAAGGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFFLVHP*LFQGSH
Trigger: ATGAGACCCTTGAAATAAGCAAGGATGGACCAGAAA...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTATCCTTCAGCCCATTGTaGTTGCTGCTGATGTCATGG +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLSFSPL*LLLMSW
Trigger: CCATGACATCAGCAGCAACCACAATGGGCTGAAGGA...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTACTCTGGGAAACAATCTaGCCAAGTGTGCACTCCATG +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLLWETI*PSVHSM
Trigger: CATGGAGTGCACACTTGGCCAGATTGTTTCCCAGAG...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTAGTCATGCTTGCCATTaGAGTCCCAGTCCCATACTA +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGISHACH*SPSPIL
Trigger: TAGTATGGGACTGGGACTCCAATGGCAAGCATGACT...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGAATTCCTGCACATTCTaGGTTGTCTTCATTAAAGTT +
Preference number: 4 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQNSCTF*VVFIKV
Trigger: AACTTTAATGAAGACAACCCAGAATGTGCAGGAATT...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTTGCATTAGCATCACCTaGGACCTAGTTAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCCISIT*DLVKDA
Trigger: TGCATCTTTAACTAGGTCCCAGGTGATGCTAATGCA...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCACTTTTGGTTCCAGACTaGCCAGCTTATATTGAAACA +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPLLVPD*PAYIET
Trigger: TGTTTCAATATAAGCTGGCCAGTCTGGAACCAAAAG...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTCTTTTGGTTCCAGACTaGCCAGCTTATATTGAAACA +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFLLVPD*PAYIET
Trigger: TGTTTCAATATAAGCTGGCCAGTCTGGAACCAAAAG...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGGGTTCTACAGCCATaGTCAAATTTATCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPWVLQP*SNLSKA
Trigger: GGCTTTAGATAAATTTGACCATGGCTGTAGAACCCA...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTCGGTGCACCAGCTGCTaGGTTGCATCATCATTCATA +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTRCTSC*VASSFI
Trigger: TATGAATGATGATGCAACTCAGCAGCTGGTGCACCG...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTCTTTCTATTAATGACTaGAAAAGCGTGTGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSLSIND*KSVCLS
Trigger: GGAAAGACACACGCTTTTTCAGTCATTAATAGAAAG...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCACAAAATCTACATCGTTaGAGAGATGGGTTTCAAATC +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPQNLHR*RDGFQI
Trigger: GATTTGAAACCCATCTCTTCAACGATGTAGATTTTG...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTCAACATAGTCGTCATTaGCAGATAATTCTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSQHSRH*QIILQQ
Trigger: TTGCTGAAGAATTATCTGGCAATGACGACTATGTTG...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTACTTGCCTGTTTCCCTaGAAGAAGATTATACAAGTT +
Preference number: 4 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFTCLFP*KKIIQV
Trigger: AACTTGTATAATCTTCTTGCAGGGAAACAGGCAAGT...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTAGATTCCCAGTGTGTTaGCAGCGGACTCATAAATGT +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIRFPVC*QRTHKC
Trigger: ACATTTATGAGTCCGCTGCCAACACACTGGGAATCT...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTGAGGTGTGCAGCTTCTaGAGTCAGTCTCATTACTTT +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIEVCSF*SQSHYF
Trigger: AAAGTAATGAGACTGACTCCAGAAGCTGCACACCTC...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGTGGGTTCTACAGCCATaGTCAAATTTATCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGWVLQP*SNLSKA
Trigger: GGCTTTAGATAAATTTGACCATGGCTGTAGAACCCA...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTCCAATTTCCGTGCATTaGATGCAAGCTCAACATAGT +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIPISVH*MQAQHS
Trigger: ACTATGTTGAGCTTGCATTCAATGCACGGAAATTGG...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAAAGAATGCATCTTGTaGATCTTGCACAGATTCAGA +
Preference number: 4 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGKECIL*ILHRFR
Trigger: TCTGAATCTGTGCAAGATTCACAAGATGCATTCTTT...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTATTGTTGTGGTTCCAGTaGAGACGCTTTGAGATCACT +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLLLWFQ*RRFEIT
Trigger: AGTGATCTCAAAGCGTCTTCACTGGAACCACAACAA...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR TCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTCTGGCCAGCTTATATTaGAACAAAACACCTCGACCC +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTLASLY*NKTPRP
Trigger: GGGTCGAGGTGTTTTGTTTCAATATAAGCTGGCCAG...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTAGTACACTGGGTTTATaGAGGTGCGAATCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTSTLGL*RCESPQ
Trigger: CTGAGGTGATTCGCACCTGCATAAACCCAGTGTACT...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATTCATTAAAGTTGATTaGAAAGTCATGAGAGACCGT +
Preference number: 4 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPFIKVD*KVMRDR
Trigger: ACGGTCTCTCATGACTTTGCAATCAACTTTAATGAA...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTAGTCATGCTTGCCATTaGAGTCCCAGTCCCATACTA +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTSHACH*SPSPIL
Trigger: TAGTATGGGACTGGGACTCCAATGGCAAGCATGACT...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAACACCATCCATGCAGTaGTGTGTGATGCCACTTTTA +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLTPSMQ*CVMPLL
Trigger: TAAAAGTGGCATCACACACCACTGCATGGATGGTGT...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCCATAATGAAATTCCATaGGTGAGTGTTACCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSHNEIP*VSVTSF
Trigger: GAAACTGGTAACACTCACCCATGGAATTTCATTATG...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTCAGAATCACAGTGCCTaGGTTCTTGTAATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIQNHSA*VLVILL
Trigger: AAGAAGAATTACAAGAACTCAGGCACTGTGATTCTG...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTACACCAGCTGCTGAGTTaGATCATCATTCATACGAAA +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLHQLLS*IIIHTK
Trigger: TTTCGTATGAATGATGATGCAACTCAGCAGCTGGTG...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTGGTCTGGGTCTCCGCTaGATAGAGAATTTACAGATA +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTGLGLR*IENLQI
Trigger: TATCTGTAAATTCTCTATGCAGCGGAGACCCAGACC...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTATGTGTCTTTTTCCACTaGTGTGATCCTCTCAATGTC +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLCVFFH*CDPLNV
Trigger: GACATTGAGAGGATCACAGCAGTGGAAAAAGACACA...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTACTTTCAGATACTCATTaGGTTGGTAAGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLLSDTH*VGKGGC
Trigger: ACATCCACCCTTACCAACCCAATGAGTATCTGAAAG...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTAATTCCTGCACATTCTaGGTTGTCTTCATTAAAGTT +
Preference number: 4 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCNSCTF*VVFIKV
Trigger: AACTTTAATGAAGACAACCCAGAATGTGCAGGAATT...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTGGGAGTTACACTTTTTaGCACTCACCAAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIGSYTF*HSPKKT
Trigger: AGTTTTCTTTGGTGAGTGCCAAAAAGTGTAACTCCC...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTTCATCTTCTTCATTCTaGGTGTGCCAATCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTSSSSF*VCQSRR
Trigger: TCTTCGAGATTGGCACACCCAGAATGAAGAAGATGA...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CCA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTCTTTGTCTAAAAACTTaGGATCAGCAGAAAGGAATG +
Preference number: 4 (lower is better)
Translates to: SFYCCGSSEDALRSLLGILCLKT*DQQKGM
Trigger: CATTCCTTTCTGCTGATCCCAAGTTTTTAGACAAAG...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR TCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTAATTTACAGATACTTTaGATGATTTCCAGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTNLQIL*MISRLG
Trigger: GCCCAGCCTGGAAATCATTCAAAGTATCTGTAAATT...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR GCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTGCATCTTGTGAATCTTaGACAGATTCAGAATCACAG +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTASCES*TDSESQ
Trigger: CTGTGATTCTGAATCTGTGCAAGATTCACAAGATGC...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CCA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAAGAAAACTTCTTAGATaGGTGCTTAACTGTCACCAA +
Preference number: 4 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLRKLLR*VLNCHQ
Trigger: TTGGTGACAGTTAAGCACCCATCTAAGAAGTTTTCT...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR GCA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTTTCATTAAAGTTGATTaGAAAGTCATGAGAGACCGT +
Preference number: 4 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTFIKVD*KVMRDR
Trigger: ACGGTCTCTCATGACTTTGCAATCAACTTTAATGAA...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS CCA 90 bp ACCCGAGCTCAGGCCCCGCCCAGGCCTTGGCGGCGGCGCTCTCCGTaGTCCTGCCGCGCCCGCAGTCTGGGCTTTCTGCTCAGCTTTGTC +
Preference number: 5 (lower is better)
Translates to: TRAQAPPRPWRRRSP*SCRARSLGFLLSFV
Trigger: GACAAAGCTGAGCAGAAAGCCCAGACTGCGGGCGCGGCAGGACCACGGAGAGCGCCGCCGCCAAGGCCTGGGCGGGGCCTGAGCTCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 90 bp GCTCAGGCCCCGCCCAGGCCTTGGCGGCGGCGCTCTCCGTGGTCCTaGCGCGCCCGCAGTCTGGGCTTTCTGCTCAGCTTTGTCGCTCAA +
Preference number: 5 (lower is better)
Translates to: AQAPPRPWRRRSPWS*RARSLGFLLSFVAQ
Trigger: TTGAGCGACAAAGCTGAGCAGAAAGCCCAGACTGCGGGCGCGGCAGGACCACGGAGAGCGCCGCCGCCAAGGCCTGGGCGGGGCCTGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 90 bp CCACCTTCTGACGAATCCCATGCACCCAGCAACCCGGCAAGAGACTaGTTCCGAAACCTCCGCGCGAGCGCCCCCTGGGGGTTGCTGACG +
Preference number: 5 (lower is better)
Translates to: PPSDESHAPSNPARD*FRNLRASAPWGLLT
Trigger: CGTCAGCAACCCCCAGGGGGCGCTCGCGCGGAGGTTTCGGAACCAGTCTCTTGCCGGGTTGCTGGGTGCATGGGATTCGTCAGAAGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS TCA 90 bp GGTGGCGGGGAGATGGCAGCTTCTCACAGAGAGATTTCCACCTTCTaGCGAATCCCATGCACCCAGCAACCCGGCAAGAGACTGGTTCCG +
Preference number: 5 (lower is better)
Translates to: GGGEMAASHREISTF*RIPCTQQPGKRLVP
Trigger: CGGAACCAGTCTCTTGCCGGGTTGCTGGGTGCATGGGATTCGTCAGAAGGTGGAAATCTCTCTGTGAGAAGCTGCCATCTCCCCGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS TCA 90 bp CTCGTCCTCCGAGGTCAGTTTAGCAACAGCGGCTGGGAAAGGTGCTaGGAGCAGAGTTCGGTCTCTCCGGAAACCCTGACTCCATTCTCG +
Preference number: 5 (lower is better)
Translates to: LVLRGQFSNSGWERC*EQSSVSPETLTPFS
Trigger: CGAGAATGGAGTCAGGGTTTCCGGAGAGACCGAACTCTGCTCTCAGCACCTTTCCCAGCCGCTGTTGCTAAACTGACCTCGGAGGACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429747.6
ENST00000512055.5
CDS TCA 90 bp CTCGTCCTCCGAGGTCAGTTTAGCAACAGCGGCTGGGAAAGGTGCTaGGAGCAGAGTTCGGTCTCTCCGGAAACCCTGACTCCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: LVLRGQFSNSGWERC*EQSSVSPETLTPKE
Trigger: TTCTTTGGGAGTCAGGGTTTCCGGAGAGACCGAACTCTGCTCTCAGCACCTTTCCCAGCCGCTGTTGCTAAACTGACCTCGGAGGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511604.5
CDS-3UTR CAA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGACAGCCAGCACGCTCTTaGCCAGGGCAGCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGQPARS*PGQLEM
Trigger: CATCTCCAGCTGCCCTGGCAAAGAGCGTGCTGGCTG...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCAGTGTCCTTCCGCGGGTaGATGGCCTGCCGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPVSFRG*MACRPA
Trigger: AGCAGGGCGGCAGGCCATCAACCCGCGGAAGGACAC...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 90 bp CCAGCACGCTCTTTGCCAGGGCAGCTGGAGATGCATGTTTGCTTGTaGCTTCCATACTTCTGCCATGAGATGACCCTTGTAGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PARSLPGQLEMHVCL*LPYFCHEMTLVGAG
Trigger: ACCAGCACCTACAAGGGTCATCTCATGGCAGAAGTATGGAAGGCACAAGCAAACATGCATCTCCAGCTGCCCTGGCAAAGAGCGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503204.1
CDS CCA 90 bp CTGGCCAGCAAACACCATCTCCTGAAAGTACAGCACCACCGATCCTaGGAAGTCAGCCCCAGAAAAGCTGCATTTCAAGGCTCAGGGTGT +
Preference number: 5 (lower is better)
Translates to: LASKHHLLKVQHHRS*EVSPRKAAFQGSGC
Trigger: ACACCCTGAGCCTTGAAATGCAGCTTTTCTGGGGCTGACTTCCCAGGATCGGTGGTGCTGTACTTTCAGGAGATGGTGTTTGCTGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514999.5
CDS-3UTR CAA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCACTGTCAGAAATGCCTTaGCACGCCACACGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPLSEMP*HATRSS
Trigger: TGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGACAG...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTAGCGCCCCCTGGGGGTaGCTGACGGAGACGAGCATT +
Preference number: 5 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFSAPWG*LTETSI
Trigger: AATGCTCGTCTCCGTCAGCAACCCCCAGGGGGCGCT...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 90 bp CTTCAGCCAGCACGCTCTTTGCCAGGGCAGCTGGAGATGCATGTTTaGTTGTGCCTTCCATACTTCTGCCATGAGATGACCCTTGTAGGT +
Preference number: 5 (lower is better)
Translates to: LQPARSLPGQLEMHV*LCLPYFCHEMTLVG
Trigger: ACCTACAAGGGTCATCTCATGGCAGAAGTATGGAAGGCACAAGCAAACATGCATCTCCAGCTGCCCTGGCAAAGAGCGTGCTGGCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503204.1
CDS TCA 90 bp AACTTGGGATCAGCAGAAAGGAATGTTAGGTCTGGCCCATGGGTATaGCGTCCTTTAGGCTCCTTATACCGCCCTGGCCAAAGTCCGTGT +
Preference number: 5 (lower is better)
Translates to: NLGSAERNVRSGPWV*RPLGSLYRPGQSPC
Trigger: ACACGGACTTTGGCCAGGGCGGTATAAGGAGCCTAAAGGACGTCATACCCATGGGCCAGACCTAACATTCCTTTCTGCTGATCCCAAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 90 bp AAACCACTGCCCATGAGACTGCATCTTGAGGATGACACAGGGGTCTaGTTTGGAAAGGGCATCTCTGTCAGAAATGCCTTTGCACGCCAC +
Preference number: 5 (lower is better)
Translates to: KPLPMRLHLEDDTGV*FGKGISVRNAFARH
Trigger: GTGGCGTGCAAAGGCATTTCTGACAGAGATGCCCTTTCCAAACCAGACCCCTGTGTCATCCTCAAGATGCAGTCTCATGGGCAGTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514999.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCAAAGTCATGCTTGCCATaGGAGTCCCAGTCCCATACT +
Preference number: 5 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPKSCLP*ESQSHT
Trigger: AGTATGGGACTGGGACTCCAATGGCAAGCATGACTT...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAGCTTTGTACTTGGGATaGATGCACTCCCACTGCACC +
Preference number: 5 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGALYLG*MHSHCT
Trigger: GGTGCAGTGGGAGTGCATCAATCCCAAGTACAAAGC...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTGGTGGGACCGTAGAGTaGGAGCTTAGGAAGACAGCT +
Preference number: 5 (lower is better)
Translates to: FVLLSGRGAILKQTRSHAGGTVE*ELRKTA
Trigger: AGCTGTCTTCCTAAGCTCCAACTCTACGGTCCCACC...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGAGAACAGGCTCTCCCTaGGGTGACCTCAGAATCCCA +
Preference number: 5 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQRTGSP*GDLRIP
Trigger: TGGGATTCTGAGGTCACCCAAGGGAGAGCCTGTTCT...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCATCAACGGCTAGGTGCTaGTGTCTTTTTCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPSTARC*CLFPLL
Trigger: CAGCAGTGGAAAAAGACACAAGCACCTAGCCGTTGA...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 90 bp CACTGTGGCCCTGGTGTTCCCAAGTTGCAAAGGAAGCTTCAGCTCTaGGTAGATTCACTCGCCGGGTTTCATAAAATTCAGCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: HCGPGVPKLQRKLQL*VDSLAGFHKIQPSS
Trigger: AGAGGAAGGCTGAATTTTATGAAACCCGGCGAGTGAATCTACCCAGAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGGGCCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505331.1
CDS-3UTR CAA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAAAGAGGGTGAAAATGTaGGAGATGTCAGGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGKRVKM*EMSGRL
Trigger: GAGCCGACCTGACATCTCCAACATTTTCACCCTCTT...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CAA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGACACAGGGGTCTGGTTaGGAAAGGGCATCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQTQGSG*ERASLS
Trigger: TGACAGAGATGCCCTTTCCAAACCAGACCCCTGTGT...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTGCCTCCTTCAGCCCATaGTGGTTGCTGCTGATGTCA +
Preference number: 5 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPASFSP*WLLLMS
Trigger: TGACATCAGCAGCAACCACAATGGGCTGAAGGAGGC...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGAGGTGCCATGCTTCAGCAAGGATTaGGACAGCTTTCTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: CHLWRQAGLLCYCQEEVPCFSKD*DSFLWE
Trigger: TTCCCAGAGAAAGCTGTCCAAATCCTTGCTGAAGCA...TGGCACCTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTGCTGGAGATGCGTGTTaGAAGTTCCTGAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPAGDAC*KFLKGT
Trigger: CGTGCCCTTCAGGAACTTCAAACACGCATCTCCAGC...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGAAGACAGGCAGGACTTTaGTGCTACTGTCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGRQAGL*CYCQEE
Trigger: CTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCT...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGCCTGGTGTTCCCAAGTaGCAAAGGAAGCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQPGVPK*QRKLQL
Trigger: GAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGG...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS TCA 90 bp GGCGTATGGCAGGAGCCTCCTCCCAGCTCTCCTTTTAATGGATTCTaGGCTGCTGGGTTCTACAGCCATGGTCAAATTTATCTAAAGCCA +
Preference number: 5 (lower is better)
Translates to: GVWQEPPPSSPFNGF*AAGFYSHGQIYLKP
Trigger: TGGCTTTAGATAAATTTGACCATGGCTGTAGAACCCAGCAGCTCAGAATCCATTAAAAGGAGAGCTGGGAGGAGGCTCCTGCCATACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000505331.1
ENST00000506687.5
ENST00000511604.5
ENST00000512055.5
CDS TCA 90 bp GCGGCTGGGAAAGGTGCTCCTCCCAGCTCTCCTTTTAATGGATTCTaGGCTGCTGGGTTCTACAGCCATGGTCAAATTTATCTAAAGCCA +
Preference number: 5 (lower is better)
Translates to: AAGKGAPPSSPFNGF*AAGFYSHGQIYLKP
Trigger: TGGCTTTAGATAAATTTGACCATGGCTGTAGAACCCAGCAGCTCAGAATCCATTAAAAGGAGAGCTGGGAGGAGCACCTTTCCCAGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505957.1
CDS CCA 90 bp CACTGTGGCCCTGGTGTTCCCAAGTTGCAAAGGAAGCTTCAGCTCTaGGTAGATTCACTCGCCGGGTTTCTGGACAACTTTCTATTAATG +
Preference number: 5 (lower is better)
Translates to: HCGPGVPKLQRKLQL*VDSLAGFLDNFLLM
Trigger: CATTAATAGAAAGTTGTCCAGAAACCCGGCGAGTGAATCTACCCAGAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGGGCCACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506687.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
CDS CCA 90 bp CACTGTGGCCCTGGTGTTCCCAAGTTGCAAAGGAAGCTTCAGCTCTaGGTAGATTCACTCGCCGGGTTTCTGTTTGATAAGATAAGAGGA +
Preference number: 5 (lower is better)
Translates to: HCGPGVPKLQRKLQL*VDSLAGFLFDKIRG
Trigger: TCCTCTTATCTTATCAAACAGAAACCCGGCGAGTGAATCTACCCAGAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGGGCCACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617767.4
CDS-3UTR CAA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTACACGCAGCTCAACTTaGGTCAGGCAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSTRSST*VRQGLL
Trigger: TAACAGCCCCTGCCTGACCAAAGTTGAGCTGCGTGT...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAGCTTTGTACTTGGGATaGATGCACTCCCACTGCACC +
Preference number: 5 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQEALYLG*MHSHCT
Trigger: GGTGCAGTGGGAGTGCATCAATCCCAAGTACAAAGC...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTGGTGGGACCGTAGAGTaGGAGCTTAGGAAGACAGCT +
Preference number: 5 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSGGTVE*ELRKTA
Trigger: AGCTGTCTTCCTAAGCTCCAACTCTACGGTCCCACC...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTATCCTCTGACGCTGACTaGGCAACCTTCTGGATGATG +
Preference number: 5 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLSSDAD*ATFWMM
Trigger: CATCATCCAGAAGGTTGCCAAGTCAGCGTCAGAGGA...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTAGACAGGCAGGACTTTaGTGCTACTGTCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: FVLLSGRGAILKQTRSHARQAGL*CYCQEE
Trigger: CTCTTCCTGACAGTAGCACAAAAGTCCTGCCTGTCT...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS TCA 90 bp GGTCGGCTTGGCCCTTGCCACGACTTCATAATGAAATTCCATGGGTaGGTGTTACCAGTTTCTGGTCCATCCTTGCTTATTTCAAGGGTC +
Preference number: 5 (lower is better)
Translates to: GRLGPCHDFIMKFHG*VLPVSGPSLLISRV
Trigger: GACCCTTGAAATAAGCAAGGATGGACCAGAAACTGGTAACACTCACCCATGGAATTTCATTATGAAGTCGTGGCAAGGGCCAAGCCGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 90 bp CCTCTCATCTCCTTGAATGTCGAGGTGAATTCTCCAATGAAGTCATaGTTGCCATTGGAGTCCCAGTCCCATACTATGCACTTTAGCCGG +
Preference number: 5 (lower is better)
Translates to: PLISLNVEVNSPMKS*LPLESQSHTMHFSR
Trigger: CCGGCTAAAGTGCATAGTATGGGACTGGGACTCCAATGGCAAGCATGACTTCATTGGAGAATTCACCTCGACATTCAAGGAGATGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS-3UTR CAA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTATTCAGCCCATTGTGGTaGCTGCTGATGTCATGGACT +
Preference number: 5 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLFSPLW*LLMSWT
Trigger: AGTCCATGACATCAGCAGCAACCACAATGGGCTGAA...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCATGCTTGCCATaGGAGTCCCAGTCCCATACT +
Preference number: 5 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLKSCLP*ESQSHT
Trigger: AGTATGGGACTGGGACTCCAATGGCAAGCATGACTT...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTGCTCCTCTCATCTCCTaGAATGTCGAGGTGAATTCT +
Preference number: 5 (lower is better)
Translates to: FVLLSGRGAILKQTRSHAAPLIS*NVEVNS
Trigger: AGAATTCACCTCGACATTCAAGGAGATGAGAGGAGC...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATCCTCTGACGCTGACTaGGCAACCTTCTGGATGATG +
Preference number: 5 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPSSDAD*ATFWMM
Trigger: CATCATCCAGAAGGTTGCCAAGTCAGCGTCAGAGGA...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCAGAACAGGCTCTCCCTaGGGTGACCTCAGAATCCCA +
Preference number: 5 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSRTGSP*GDLRIP
Trigger: TGGGATTCTGAGGTCACCCAAGGGAGAGCCTGTTCT...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGGCTGGAGATGCGTGTTaGAAGTTCCTGAAGGGCACG +
Preference number: 5 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGAGDAC*KFLKGT
Trigger: CGTGCCCTTCAGGAACTTCAAACACGCATCTCCAGC...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCAAGCAGCGAGACTGATTaGAGGTGTGCAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPSSETD*RCAASG
Trigger: TCCAGAAGCTGCACACCTCAAATCAGTCTCGCTGCT...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp GGATTGACACCATCCATGCAGTGGTGTGTGATGCCACTTTTAAGAGGGCAGGGATCCAGTGAAGACGCTTaGAGATCACTTCTAGGGATT +
Preference number: 5 (lower is better)
Translates to: GLTPSMQWCVMPLLRGQGSSEDA*RSLLGI
Trigger: AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGA...TCCCTGCCCTCTTAAAAGTGGCATCACACACCACTGCATGGATGGTGTCAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTCCTGGTGTTCCCAAGTaGCAAAGGAAGCTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSPGVPK*QRKLQL
Trigger: GAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGG...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATGTGTAAGTAGGTCGGCTTGGCCCTaGCCACGACTTCATAATGAA +
Preference number: 5 (lower is better)
Translates to: LVDQISGAVLHSHLPCVSRSAWP*PRLHNE
Trigger: TTCATTATGAAGTCGTGGCAAGGGCCAAGCCGACCT...ACTTACACATGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS TCA 90 bp GCCGGCGGTCTGGGTCTCCGCTGCATAGAGAATTTACAGATACTTTaGATGATTTCCAGGCTGGGCTTAAGTTATTCATCACAACCTCAG +
Preference number: 5 (lower is better)
Translates to: AGGLGLRCIENLQIL*MISRLGLSYSSQPQ
Trigger: CTGAGGTTGTGATGAATAACTTAAGCCCAGCCTGGAAATCATTCAAAGTATCTGTAAATTCTCTATGCAGCGGAGACCCAGACCGCCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CCA 90 bp GGGTGCTTAACTGTCACCAAAAATGGTAAAGGTGTTGCTAATCTCTaGATCCTTCGTGTCTACAAAACTGTCTGGCGTATGGCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GCLTVTKNGKGVANL*ILRVYKTVWRMAGA
Trigger: GGCTCCTGCCATACGCCAGACAGTTTTGTAGACACGAAGGATCCAGAGATTAGCAACACCTTTACCATTTTTGGTGACAGTTAAGCACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000505331.1
ENST00000506687.5
ENST00000511604.5
ENST00000512055.5
CDS CCA 90 bp TCCAGGTCGGCTTGGCCCTTGCCACGACTTCATAATGAAATTCCATaGGTGAGTGTTACCAGTTTCTGGTCCATCCTTGCTTATTTCAAG +
Preference number: 5 (lower is better)
Translates to: SRSAWPLPRLHNEIP*VSVTSFWSILAYFK
Trigger: CTTGAAATAAGCAAGGATGGACCAGAAACTGGTAACACTCACCCATGGAATTTCATTATGAAGTCGTGGCAAGGGCCAAGCCGACCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CAA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGACACAGGGGTCTGGTTaGGAAAGGGCATCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGTQGSG*ERASLS
Trigger: TGACAGAGATGCCCTTTCCAAACCAGACCCCTGTGT...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTCAGCCAGCACGCTCTTaGCCAGGGCAGCTGGAGATG +
Preference number: 5 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTQPARS*PGQLEM
Trigger: CATCTCCAGCTGCCCTGGCAAAGAGCGTGCTGGCTG...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAGAAGCCACGCTGTTTTaGATGGTCTCCATCATGACA +
Preference number: 5 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLEATLF*MVSIMT
Trigger: TGTCATGATGGAGACCATCAAAAACAGCGTGGCTTC...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTACTGGCCAGCTTATATaGAAACAAAACACCTCGACC +
Preference number: 5 (lower is better)
Translates to: FVLLSGRGAILKQTRSHATGQLI*KQNTST
Trigger: GGTCGAGGTGTTTTGTTTCAATATAAGCTGGCCAGT...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTTGCTTGCAAAAACACTaGCCTGTTTCCCTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: FVLLSGRGAILKQTRSHACLQKH*PVSLQE
Trigger: TTCTTGCAGGGAAACAGGCAAGTGTTTTTGCAAGCA...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTATGCAAAATCCGGCTTaGAAGTGGAGGTGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: NSHTKLKGQFSGPDIGSCMQNPA*KWRWLV
Trigger: CACCAACCACCTCCACTTCAAAGCCGGATTTTGCAT...ACAGCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CAA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGTTCAGCCCATTGTGGTaGCTGCTGATGTCATGGACT +
Preference number: 5 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGFSPLW*LLMSWT
Trigger: AGTCCATGACATCAGCAGCAACCACAATGGGCTGAA...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTGCCTCCTTCAGCCCATaGTGGTTGCTGCTGATGTCA +
Preference number: 5 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIASFSP*WLLLMS
Trigger: TGACATCAGCAGCAACCACAATGGGCTGAAGGAGGC...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCAGCACCAGCTGCTGAGTaGCATCATCATTCATACGAA +
Preference number: 5 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPAPAAE*HHHSYE
Trigger: TTCGTATGAATGATGATGCAACTCAGCAGCTGGTGC...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTTTCTTGGCTTTGTACTaGGGATTGATGCACTCCCAC +
Preference number: 5 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSFLALY*GLMHSH
Trigger: GTGGGAGTGCATCAATCCCAAGTACAAAGCCAAGAA...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AAGGTCAATTTAGTGGACCAGATATCGGGAGCTGTACTGCATAGCCATTTGCCATTCTTGGCTTTGTACTaGGGATTGATGCACTCCCAC +
Preference number: 5 (lower is better)
Translates to: KVNLVDQISGAVLHSHLPFLALY*GLMHSH
Trigger: GTGGGAGTGCATCAATCCCAAGTACAAAGCCAAGAA...TGGCAAATGGCTATGCAGTACAGCTCCCGATATCTGGTCCACTAAATTGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGTTCTTCTTCTTGGCTTaGTACTTGGGATTGATGCAC +
Preference number: 5 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQFFFLA*YLGLMH
Trigger: GTGCATCAATCCCAAGTACAAAGCCAAGAAGAAGAA...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTTACTGTAAACTGGATTaGGCAGCCACCCATGATGTA +
Preference number: 5 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPYCKLD*AATHDV
Trigger: TACATCATGGGTGGCTGCCAAATCCAGTTTACAGTA...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCGGCTTCCACAACTCCTaGAATTCCTGCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSGFHNS*NSCTFW
Trigger: CCAGAATGTGCAGGAATTCAAGGAGTTGTGGAAGCC...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAAACTGGCCAGCTTATATaGAAACAAAACACCTCGACC +
Preference number: 5 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQETGQLI*KQNTST
Trigger: GGTCGAGGTGTTTTGTTTCAATATAAGCTGGCCAGT...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAACCAGAGACAGGCGGTTaGGATGAGAATTATTCTCTT +
Preference number: 5 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQEPETGG*DENYSL
Trigger: AAGAGAATAATTCTCATCCAAACCGCCTGTCTCTGG...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CAA 90 bp ATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTCAGTTACTGAAGAAATCCTaGTCATCCAATTTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: MRGAGLDDPDLPQKDSPQLLKKS*SSNFRA
Trigger: TGCACGGAAATTGGATGACAAGGATTTCTTCAGTAA...CTGAGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCGCTCCTCTCATCTCCTaGAATGTCGAGGTGAATTCT +
Preference number: 5 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSAPLIS*NVEVNS
Trigger: AGAATTCACCTCGACATTCAAGGAGATGAGAGGAGC...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TGGAGTCAGTCTCATTACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTTCCAGTGAAGACGCTTaGAGATCACTTCTAGGGATT +
Preference number: 5 (lower is better)
Translates to: WSQSHYFLLSPLETGRTFSSEDA*RSLLGI
Trigger: AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGA...AAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGTAATGAGACTGACTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGTATGAGAGGTGCTGGGCTAGATGACCCAGACTTACCTCAAAAAGACTCACCTTGGGAGTTACACTTTTaGGCACTCACCAAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: SMRGAGLDDPDLPQKDSPWELHF*ALTKEN
Trigger: GTTTTCTTTGGTGAGTGCCAAAAAGTGTAACTCCCA...AGGTGAGTCTTTTTGAGGTAAGTCTGGGTCATCTAGCCCAGCACCTCTCATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 90 bp GTCTCTCCGGAAACCCTGACTCCCAAAGAAAACTTCTTAGATGGGTaGTTAACTGTCACCAAAAATGGTAAAGGTGTTGCTAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: VSPETLTPKENFLDG*LTVTKNGKGVANLW
Trigger: CCAGAGATTAGCAACACCTTTACCATTTTTGGTGACAGTTAAGCACCCATCTAAGAAGTTTTCTTTGGGAGTCAGGGTTTCCGGAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511604.5
CDS CCA 90 bp CCACGACTTCATAATGAAATTCCATGGGTGAGTGTTACCAGTTTCTaGTCCATCCTTGCTTATTTCAAGGGTCTCATCATCCCATCCACT +
Preference number: 5 (lower is better)
Translates to: PRLHNEIPWVSVTSF*SILAYFKGLIIPST
Trigger: AGTGGATGGGATGATGAGACCCTTGAAATAAGCAAGGATGGACCAGAAACTGGTAACACTCACCCATGGAATTTCATTATGAAGTCGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 90 bp AAAATCTACATCGTTGAAGAGATGGGTTTCAAATCCAGGTCGGCTTaGCCCTTGCCACGACTTCATAATGAAATTCCATGGGTGAGTGTT +
Preference number: 5 (lower is better)
Translates to: KIYIVEEMGFKSRSA*PLPRLHNEIPWVSV
Trigger: AACACTCACCCATGGAATTTCATTATGAAGTCGTGGCAAGGGCCAAGCCGACCTGGATTTGAAACCCATCTCTTCAACGATGTAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CAA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTACACGCAGCTCAACTTaGGTCAGGCAGGGGCTGTTA +
Preference number: 5 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTTRSST*VRQGLL
Trigger: TAACAGCCCCTGCCTGACCAAAGTTGAGCTGCGTGT...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ACTTTCTACTGTCACCTCTGGAGACAGGCAGGACTTTTGTGCTACTGTCAGGAATTACTGAAGAAATCCTaGTCATCCAATTTCCGTGCA +
Preference number: 5 (lower is better)
Translates to: TFYCHLWRQAGLLCYCQELLKKS*SSNFRA
Trigger: TGCACGGAAATTGGATGACAAGGATTTCTTCAGTAA...TTCCTGACAGTAGCACAAAAGTCCTGCCTGTCTCCAGAGGTGACAGTAGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGTACTGTAAACTGGATTaGGCAGCCACCCATGATGTA +
Preference number: 5 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGYCKLD*AATHDV
Trigger: TACATCATGGGTGGCTGCCAAATCCAGTTTACAGTA...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTGGCTTCCACAACTCCTaGAATTCCTGCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIGFHNS*NSCTFW
Trigger: CCAGAATGTGCAGGAATTCAAGGAGTTGTGGAAGCC...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp TTTGTGCTACTGTCAGGAAGAGGTGCCATTCTCAAGCAGACTAGAAGCCACGCTTTTTCTGATTCGCAATaGGTTAAGGAAGGGAAACTT +
Preference number: 5 (lower is better)
Translates to: FVLLSGRGAILKQTRSHAFSDSQ*VKEGKL
Trigger: AAGTTTCCCTTCCTTAACCAATTGCGAATCAGAAAA...AGCGTGGCTTCTAGTCTGCTTGAGAATGGCACCTCTTCCTGACAGTAGCACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 90 bp AGAGTTCGGTCTCTCCGGAAACCCAAAGAAAACTTCTTAGATGGGTaGTTAACTGTCACCAAAAATGGTAAAGGTGTTGCTAATCTCTGG +
Preference number: 5 (lower is better)
Translates to: RVRSLRKPKENFLDG*LTVTKNGKGVANLW
Trigger: CCAGAGATTAGCAACACCTTTACCATTTTTGGTGACAGTTAAGCACCCATCTAAGAAGTTTTCTTTGGGTTTCCGGAGAGACCGAACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506687.5
CDS-3UTR CAA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTTGCTTCAGCAAGGATTaGGACAGCTTTCTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: SFYCCGSSEDALRSLLGICFSKD*DSFLWE
Trigger: TTCCCAGAGAAAGCTGTCCAAATCCTTGCTGAAGCA...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTCAGATACTCATTGGGTaGGTAAGGGTGGATGTAGTG +
Preference number: 5 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIQILIG*VRVDVV
Trigger: CACTACATCCACCCTTACCAACCCAATGAGTATCTG...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp CTCAAGCAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTACAAAATGTTGTGCATTaGGTGACATGTATTTGCAAG +
Preference number: 5 (lower is better)
Translates to: LKQTRSHAVFDGLHHDTLQNVVH*VTCICK
Trigger: CTTGCAAATACATGTCACCAAATGCACAACATTTTG...TAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTGCTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAGCACCAGCTGCTGAGTaGCATCATCATTCATACGAA +
Preference number: 5 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLAPAAE*HHHSYE
Trigger: TTCGTATGAATGATGATGCAACTCAGCAGCTGGTGC...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTAGAAGCCACGCTGTTTTaGATGGTCTCCATCATGACA +
Preference number: 5 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLEATLF*MVSIMT
Trigger: TGTCATGATGGAGACCATCAAAAACAGCGTGGCTTC...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp AGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAGCGTACTGCATAGCCATTaGCCATGTGTAAGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: RNSHTKLKGQFSGPDIGSVLHSH*PCVSFY
Trigger: ATAGAAACTTACACATGGCAAATGGCTATGCAGTAC...GCTCCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp CAGACTAGAAGCCACGCTGTTTTTGATGGTCTCCATCATGACACCCTAAAGTCTCAAAATGTTGTGCATTaGGTGACATGTATTTGCAAG +
Preference number: 5 (lower is better)
Translates to: QTRSHAVFDGLHHDTLKSQNVVH*VTCICK
Trigger: CTTGCAAATACATGTCACCAAATGCACAACATTTTG...AGACTTTAGGGTGTCATGATGGAGACCATCAAAAACAGCGTGGCTTCTAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp GCAAGAAATTCCCACACTAAGCTCAAAGGTCAATTTAGTGGACCAGATATCGGGAAAATGGTAAAGGTGTaGCTAATCTCTGGATCCTTC +
Preference number: 5 (lower is better)
Translates to: ARNSHTKLKGQFSGPDIGKMVKV*LISGSF
Trigger: GAAGGATCCAGAGATTAGCAACACCTTTACCATTTT...CCCGATATCTGGTCCACTAAATTGACCTTTGAGCTTAGTGTGGGAATTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CAA 90 bp AGTTTCTATTGTTGTGGTTCCAGTGAAGACGCTTTGAGATCACTTCTAGGGATTGTTTCTGGTCCATCCTaGCTTATTTCAAGGGTCTCA +
Preference number: 5 (lower is better)
Translates to: SFYCCGSSEDALRSLLGIVSGPS*LISRVS
Trigger: TGAGACCCTTGAAATAAGCAAGGATGGACCAGAAAC...AATCCCTAGAAGTGATCTCAAAGCGTCTTCACTGGAACCACAACAATAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 90 bp CACACAAATTGGCCAGATGACATCTTTACTGGTATAGGTCATTGGTaGATTCGAGGATTTTCTGATTCGCAATTGGTTAAGGAAGGGAAA +
Preference number: 5 (lower is better)
Translates to: HTNWPDDIFTGIGHW*IRGFSDSQLVKEGK
Trigger: TTTCCCTTCCTTAACCAATTGCGAATCAGAAAATCCTCGAATCCACCAATGACCTATACCAGTAAAGATGTCATCTGGCCAATTTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 90 bp TTTCACACAAATTGGCCAGATGACATCTTTACTGGTATAGGTCATTaGTGGATTCGAGGATTTTCTGATTCGCAATTGGTTAAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: FHTNWPDDIFTGIGH*WIRGFSDSQLVKEG
Trigger: CCCTTCCTTAACCAATTGCGAATCAGAAAATCCTCGAATCCACCAATGACCTATACCAGTAAAGATGTCATCTGGCCAATTTGTGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS-3UTR CAA 90 bp GAATCTTGGGTCCCACACAGACCTATGTATCACAATCTGAATTTTAATAAGACTCAGATACTCATTGGGTaGGTAAGGGTGGATGTAGTG +
Preference number: 5 (lower is better)
Translates to: ESWVPHRPMYHNLNFNKTQILIG*VRVDVV
Trigger: CACTACATCCACCCTTACCAACCCAATGAGTATCTG...AGTCTTATTAAAATTCAGATTGTGATACATAGGTCTGTGTGGGACCCAAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTATGCTTGCAAAAACACTaGCCTGTTTCCCTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLCLQKH*PVSLQE
Trigger: TTCTTGCAGGGAAACAGGCAAGTGTTTTTGCAAGCA...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS-3UTR CAA 90 bp ATATTGAAACAAAACACCTCGACCCCAGACAATAATTCCAGGCATTTCTGCTTATTCTTCTTCTTGGCTTaGTACTTGGGATTGATGCAC +
Preference number: 5 (lower is better)
Translates to: ILKQNTSTPDNNSRHFCLFFFLA*YLGLMH
Trigger: GTGCATCAATCCCAAGTACAAAGCCAAGAAGAAGAA...TAAGCAGAAATGCCTGGAATTATTGTCTGGGGTCGAGGTGTTTTGTTTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512055.5
ENST00000617767.4
CDS CCA 72 bp CAGGCCCCGCCCAGGCCTTGGCGGCGGCGCTCTCCGTaGTCCTGCCGCGCCCGCAGTCTGGGCTTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: QAPPRPWRRRSP*SCRARSLGFLL
Trigger: GAGCAGAAAGCCCAGACTGCGGGCGCGGCAGGACCACGGAGAGCGCCGCCGCCAAGGCCTGGGCGGGGCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 72 bp CCGCCCAGGCCTTGGCGGCGGCGCTCTCCGTGGTCCTaGCGCGCCCGCAGTCTGGGCTTTCTGCTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: PPRPWRRRSPWS*RARSLGFLLSF
Trigger: AAAGCTGAGCAGAAAGCCCAGACTGCGGGCGCGGCAGGACCACGGAGAGCGCCGCCGCCAAGGCCTGGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS TCA 72 bp TACCGCCCTGGCCAAAGTCCGTGTCCTTCCGCGGGTTaGTGGCCTGCCGCCCTGCTGGCCTACCGGCGTCTG +
Preference number: 6 (lower is better)
Translates to: YRPGQSPCPSAG*WPAALLAYRRL
Trigger: CAGACGCCGGTAGGCCAGCAGGGCGGCAGGCCATCAACCCGCGGAAGGACACGGACTTTGGCCAGGGCGGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 72 bp GACGAATCCCATGCACCCAGCAACCCGGCAAGAGACTaGTTCCGAAACCTCCGCGCGAGCGCCCCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: DESHAPSNPARD*FRNLRASAPWG
Trigger: CCCCCAGGGGGCGCTCGCGCGGAGGTTTCGGAACCAGTCTCTTGCCGGGTTGCTGGGTGCATGGGATTCGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CAA 72 bp ATACCGCCCTGGCCAAAGTCCGTGTCCTTCCGCGGGTaGATGGCCTGCCGCCCTGCTGGCCTACCGGCGTCT +
Preference number: 6 (lower is better)
Translates to: IPPWPKSVSFRG*MACRPAGLPAS
Trigger: AGACGCCGGTAGGCCAGCAGGGCGGCAGGCCATCAACCCGCGGAAGGACACGGACTTTGGCCAGGGCGGTAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 72 bp ACTCTAGGGTGGAGCGGTCGTATCGCGGCGCGGGTGTaGGGGGAATGGGAGTTACACTTTTTGGCACTCACC +
Preference number: 6 (lower is better)
Translates to: TLGWSGRIAARV*GEWELHFLALT
Trigger: GGTGAGTGCCAAAAAGTGTAACTCCCATTCCCCCCACACCCGCGCCGCGATACGACCGCTCCACCCTAGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 72 bp ATGGGTATGACGTCCTTTAGGCTCCTTATACCGCCCTaGCCAAAGTCCGTGTCCTTCCGCGGGTTGATGGCC +
Preference number: 6 (lower is better)
Translates to: MGMTSFRLLIPP*PKSVSFRGLMA
Trigger: GGCCATCAACCCGCGGAAGGACACGGACTTTGGCCAGGGCGGTATAAGGAGCCTAAAGGACGTCATACCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CAA 72 bp CCACCAAGGAAGTCGGCCTCCTTCAGCCCATTGTGGTaGCTGCTGATGTCATGGACTTCAAACCGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: PPRKSASFSPLW*LLMSWTSNRRR
Trigger: GCGCCTGCGGTTTGAAGTCCATGACATCAGCAGCAACCACAATGGGCTGAAGGAGGCCGACTTCCTTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS TCA 72 bp CGAGGTCAGTTTAGCAACAGCGGCTGGGAAAGGTGCTaGGAGCAGAGTTCGGTCTCTCCGGAAACCCTGACT +
Preference number: 6 (lower is better)
Translates to: RGQFSNSGWERC*EQSSVSPETLT
Trigger: AGTCAGGGTTTCCGGAGAGACCGAACTCTGCTCTCAGCACCTTTCCCAGCCGCTGTTGCTAAACTGACCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000429747.6
ENST00000511604.5
ENST00000512055.5
CDS TCA 72 bp CTGGACGATGTCTCGAAGAACAGGCTCTCCCTTGGGTaGCCTCAGAATCCCATCATCACCGTCCAGCATCTG +
Preference number: 6 (lower is better)
Translates to: LDDVSKNRLSLG*PQNPIITVQHL
Trigger: CAGATGCTGGACGGTGATGATGGGATTCTGAGGTCACCCAAGGGAGAGCCTGTTCTTCGAGACATCGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514439.1
ENST00000515418.1
ENST00000617767.4
CDS CCA 72 bp ATGCCACCAAGGAAGTCGGCCTCCTTCAGCCCATTGTaGTTGCTGCTGATGTCATGGACTTCAAACCGCAGG +
Preference number: 6 (lower is better)
Translates to: MPPRKSASFSPL*LLLMSWTSNRR
Trigger: CCTGCGGTTTGAAGTCCATGACATCAGCAGCAACCACAATGGGCTGAAGGAGGCCGACTTCCTTGGTGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CCA 72 bp CGAACTGGACGATGTCTCGAAGAACAGGCTCTCCCTTaGGTGACCTCAGAATCCCATCATCACCGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: RTGRCLEEQALP*VTSESHHHRPA
Trigger: TGCTGGACGGTGATGATGGGATTCTGAGGTCACCCAAGGGAGAGCCTGTTCTTCGAGACATCGTCCAGTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514439.1
ENST00000515418.1
ENST00000617767.4
CDS CAA 72 bp TCCATGCCACCAAGGAAGTCGGCCTCCTTCAGCCCATaGTGGTTGCTGCTGATGTCATGGACTTCAAACCGC +
Preference number: 6 (lower is better)
Translates to: SMPPRKSASFSP*WLLLMSWTSNR
Trigger: GCGGTTTGAAGTCCATGACATCAGCAGCAACCACAATGGGCTGAAGGAGGCCGACTTCCTTGGTGGCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CAA 72 bp ACGAACTGGACGATGTCTCGAAGAACAGGCTCTCCCTaGGGTGACCTCAGAATCCCATCATCACCGTCCAGC +
Preference number: 6 (lower is better)
Translates to: TNWTMSRRTGSP*GDLRIPSSPSS
Trigger: GCTGGACGGTGATGATGGGATTCTGAGGTCACCCAAGGGAGAGCCTGTTCTTCGAGACATCGTCCAGTTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514439.1
ENST00000515418.1
ENST00000617767.4
CDS CAA 90 bp GCATCTCTGTCAGAAATGCCTTTGCACGCCACACGCAGCTCAACTTaGGTCAGGCAGGGGCTGTTAAAGATTCCCAGTGTGTTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: ASLSEMPLHATRSST*VRQGLLKIPSVLAA
Trigger: CGCTGCCAACACACTGGGAATCTTTAACAGCCCCTGCCTGACCAAAGTTGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGACAGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514999.5
ENST00000617767.4
CDS CAA 90 bp ACACAGGGGTCTGGTTTGGAAAGGGCATCTCTGTCAGAAATGCCTTaGCACGCCACACGCAGCTCAACTTTGGTCAGGCAGGGGCTGTTA +
Preference number: 6 (lower is better)
Translates to: TQGSGLERASLSEMP*HATRSSTLVRQGLL
Trigger: TAACAGCCCCTGCCTGACCAAAGTTGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGACAGAGATGCCCTTTCCAAACCAGACCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514999.5
ENST00000617767.4
CDS CAA 90 bp CAGCCAGCACGCTCTTTGCCAGGGCAGCTGGAGATGCATGTTTGCTaGTGCCTTCCATACTTCTGCCATGAGATGACCCTTGTAGGTGCT +
Preference number: 6 (lower is better)
Translates to: QPARSLPGQLEMHVC*CLPYFCHEMTLVGA
Trigger: AGCACCTACAAGGGTCATCTCATGGCAGAAGTATGGAAGGCACAAGCAAACATGCATCTCCAGCTGCCCTGGCAAAGAGCGTGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503204.1
CDS TCA 72 bp GAGATGGCAGCTTCTCACAGAGAGATTTCCACCTTCTaGCGAATCCCATGCACCCAGCAACCCGGCAAGAGA +
Preference number: 6 (lower is better)
Translates to: EMAASHREISTF*RIPCTQQPGKR
Trigger: TCTCTTGCCGGGTTGCTGGGTGCATGGGATTCGTCAGAAGGTGGAAATCTCTCTGTGAGAAGCTGCCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 72 bp CTGGTTTGGAAAGGGCATCTCTGTCAGAAATGCCTTTaGACGCCACACGCAGCTCAACTTTGGTCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: LVWKGHLCQKCL*TPHAAQLWSGR
Trigger: CCTGCCTGACCAAAGTTGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGACAGAGATGCCCTTTCCAAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514999.5
ENST00000617767.4
CDS CCA 72 bp CATCTTCTTCATTCTGGGTGTGCCAATCTCGAAGAGTaGAGAGAGAATTCAGCCCGGGACGAGGTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: HLLHSGCANLEE*RENSARDEVCP
Trigger: GGGACAGACCTCGTCCCGGGCTGAATTCTCTCTCCACTCTTCGAGATTGGCACACCCAGAATGAAGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000429747.6
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
CDS TCA 72 bp ATCACCTCAGTCCTGTCAACCTCAAACCACTGCCCATaGGACTGCATCTTGAGGATGACACAGGGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: ITSVLSTSNHCP*DCILRMTQGSG
Trigger: ACCAGACCCCTGTGTCATCCTCAAGATGCAGTCTCATGGGCAGTGGTTTGAGGTTGACAGGACTGAGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514999.5
ENST00000617767.4
CDS TCA 72 bp GATTTTGTGCTTCACTGGCCAGCAAACACCATCTCCTaGAAGTACAGCACCACCGATCCTGGGAAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: DFVLHWPANTIS*KYSTTDPGKSA
Trigger: GGCTGACTTCCCAGGATCGGTGGTGCTGTACTTTCAGGAGATGGTGTTTGCTGGCCAGTGAAGCACAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514999.5
CDS CAA 72 bp TCAGAAATGCCTTTGCACGCCACACGCAGCTCAACTTaGGTCAGGCAGGGGCTGTTAAAGATTCCCAGTGTG +
Preference number: 6 (lower is better)
Translates to: SEMPLHATRSST*VRQGLLKIPSV
Trigger: CACACTGGGAATCTTTAACAGCCCCTGCCTGACCAAAGTTGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514999.5
ENST00000617767.4
CDS CAA 72 bp TCTGGTTTGGAAAGGGCATCTCTGTCAGAAATGCCTTaGCACGCCACACGCAGCTCAACTTTGGTCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SGLERASLSEMP*HATRSSTLVRQ
Trigger: CTGCCTGACCAAAGTTGAGCTGCGTGTGGCGTGCAAAGGCATTTCTGACAGAGATGCCCTTTCCAAACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514999.5
ENST00000617767.4
CDS CAA 72 bp GATGCCTCCTTGGTGTTAGTTTCCTCTGACGCTGACTaGGCAACCTTCTGGATGATGGGGGCAATGTTGGTG +
Preference number: 6 (lower is better)
Translates to: DASLVLVSSDAD*ATFWMMGAMLV
Trigger: CACCAACATTGCCCCCATCATCCAGAAGGTTGCCAAGTCAGCGTCAGAGGAAACTAACACCAAGGAGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CAA 90 bp TCTAAAGCCAAGCCACAAAGTCACTGTGGCCCTGGTGTTCCCAAGTaGCAAAGGAAGCTTCAGCTCTGGGTAGATTCACTCGCCGGGTTT +
Preference number: 6 (lower is better)
Translates to: SKAKPQSHCGPGVPK*QRKLQLWVDSLAGF
Trigger: AAACCCGGCGAGTGAATCTACCCAGAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGGGCCACAGTGACTTTGTGGCTTGGCTTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502818.5
ENST00000505331.1
ENST00000505957.1
ENST00000506687.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000617767.4
CDS CCA 72 bp CAAAGTCATGAGAGACCGTGTACTCTGGAGGTATCCTaGCGCCAAACCCAAAGGCAGGGAACATTTTGTCAC +
Preference number: 6 (lower is better)
Translates to: QSHERPCTLEVS*RQTQRQGTFCH
Trigger: GTGACAAAATGTTCCCTGCCTTTGGGTTTGGCGCCAGGATACCTCCAGAGTACACGGTCTCTCATGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CCA 72 bp CCTGGTGTTCCCAAGTTGCAAAGGAAGCTTCAGCTCTaGGTAGATTCACTCGCCGGGTTTCTGGACAACTTT +
Preference number: 6 (lower is better)
Translates to: PGVPKLQRKLQL*VDSLAGFLDNF
Trigger: AAAGTTGTCCAGAAACCCGGCGAGTGAATCTACCCAGAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000506687.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
CDS CCA 72 bp AAACACCATCTCCTGAAAGTACAGCACCACCGATCCTaGGAAGTCAGCCCCAGAAAAGCTGCATTTCAAGGC +
Preference number: 6 (lower is better)
Translates to: KHHLLKVQHHRS*EVSPRKAAFQG
Trigger: GCCTTGAAATGCAGCTTTTCTGGGGCTGACTTCCCAGGATCGGTGGTGCTGTACTTTCAGGAGATGGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514999.5
CDS CAA 72 bp AAGCCACAAAGTCACTGTGGCCCTGGTGTTCCCAAGTaGCAAAGGAAGCTTCAGCTCTGGGTAGATTCACTC +
Preference number: 6 (lower is better)
Translates to: KPQSHCGPGVPK*QRKLQLWVDSL
Trigger: GAGTGAATCTACCCAGAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGGGCCACAGTGACTTTGTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000502818.5
ENST00000505331.1
ENST00000505957.1
ENST00000506687.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000617767.4
CDS CAA 72 bp GTCTTAGAGGGCACCCGGCACCTAGTTCCAGGCTCGTaGATGCACCTACATAAAGCTGTATGTGAACCACAT +
Preference number: 6 (lower is better)
Translates to: VLEGTRHLVPGS*MHLHKAVCEPH
Trigger: ATGTGGTTCACATACAGCTTTATGTAGGTGCATCAACGAGCCTGGAACTAGGTGCCGGGTGCCCTCTAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514999.5
CDS CAA 90 bp GTGATGGAAGATTTCCCTGCTGTGTTCCCATGCTTCAGCAAGGATTaGGACAGCTTTCTCTGGGAAACAATCTGGCCAAGTGTGCACTCC +
Preference number: 6 (lower is better)
Translates to: VMEDFPAVFPCFSKD*DSFLWETIWPSVHS
Trigger: GGAGTGCACACTTGGCCAGATTGTTTCCCAGAGAAAGCTGTCCAAATCCTTGCTGAAGCATGGGAACACAGCAGGGAAATCTTCCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CCA 72 bp CCCATGAGACTGCATCTTGAGGATGACACAGGGGTCTaGTTTGGAAAGGGCATCTCTGTCAGAAATGCCTTT +
Preference number: 6 (lower is better)
Translates to: PMRLHLEDDTGV*FGKGISVRNAF
Trigger: AAAGGCATTTCTGACAGAGATGCCCTTTCCAAACCAGACCCCTGTGTCATCCTCAAGATGCAGTCTCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000505957.1
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000514999.5
ENST00000617767.4
CDS CCA 72 bp CCTGGTGTTCCCAAGTTGCAAAGGAAGCTTCAGCTCTaGGTAGATTCACTCGCCGGGTTTCTGTTTGATAAG +
Preference number: 6 (lower is better)
Translates to: PGVPKLQRKLQL*VDSLAGFLFDK
Trigger: CTTATCAAACAGAAACCCGGCGAGTGAATCTACCCAGAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617767.4
CDS TCA 72 bp GATGCATGTTTGCTTGTGCCTTCCATACTTCTGCCATaGGATGACCCTTGTAGGTGCTGGTGCTATGCTCTT +
Preference number: 6 (lower is better)
Translates to: DACLLVPSILLP*DDPCRCWCYAL
Trigger: AAGAGCATAGCACCAGCACCTACAAGGGTCATCTCATGGCAGAAGTATGGAAGGCACAAGCAAACATGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503204.1
CDS CCA 72 bp ATTTCCCTGCTGTGTTCCCATGCTTCAGCAAGGATTTaGACAGCTTTCTCTGGGAAACAATCTGGCCAAGTG +
Preference number: 6 (lower is better)
Translates to: ISLLCSHASARI*TAFSGKQSGQV
Trigger: CACTTGGCCAGATTGTTTCCCAGAGAAAGCTGTCCAAATCCTTGCTGAAGCATGGGAACACAGCAGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CCA 72 bp CCTGGTGTTCCCAAGTTGCAAAGGAAGCTTCAGCTCTaGGTAGATTCACTCGCCGGGTTTCATAAAATTCAG +
Preference number: 6 (lower is better)
Translates to: PGVPKLQRKLQL*VDSLAGFHKIQ
Trigger: CTGAATTTTATGAAACCCGGCGAGTGAATCTACCCAGAGCTGAAGCTTCCTTTGCAACTTGGGAACACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505331.1
CDS CCA 72 bp GCTTGGCCCTTGCCACGACTTCATAATGAAATTCCATaGGTGAGTGTTACCAGTTTCTGGTCCATCCTTGCT +
Preference number: 6 (lower is better)
Translates to: AWPLPRLHNEIP*VSVTSFWSILA
Trigger: AGCAAGGATGGACCAGAAACTGGTAACACTCACCCATGGAATTTCATTATGAAGTCGTGGCAAGGGCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CAA 72 bp GATTTCCCTGCTGTGTTCCCATGCTTCAGCAAGGATTaGGACAGCTTTCTCTGGGAAACAATCTGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: DFPAVFPCFSKD*DSFLWETIWPS
Trigger: ACTTGGCCAGATTGTTTCCCAGAGAAAGCTGTCCAAATCCTTGCTGAAGCATGGGAACACAGCAGGGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000505881.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CAA 72 bp CATGAGATGACCCTTGTAGGTGCTGGTGCTATGCTCTaGGACTTCCCAGACTCCAAAACCATGAGCCAAATA +
Preference number: 6 (lower is better)
Translates to: HEMTLVGAGAML*DFPDSKTMSQI
Trigger: TATTTGGCTCATGGTTTTGGAGTCTGGGAAGTCCAAGAGCATAGCACCAGCACCTACAAGGGTCATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503204.1
CDS CAA 72 bp GAAGAGATGGGTTTCAAATCCAGGTCGGCTTGGCCCTaGCCACGACTTCATAATGAAATTCCATGGGTGAGT +
Preference number: 6 (lower is better)
Translates to: EEMGFKSRSAWP*PRLHNEIPWVS
Trigger: ACTCACCCATGGAATTTCATTATGAAGTCGTGGCAAGGGCCAAGCCGACCTGGATTTGAAACCCATCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CAA 90 bp TACTTCTGCCATGAGATGACCCTTGTAGGTGCTGGTGCTATGCTCTaGGACTTCCCAGACTCCAAAACCATGAGCCAAATACACTTCTGT +
Preference number: 6 (lower is better)
Translates to: YFCHEMTLVGAGAML*DFPDSKTMSQIHFC
Trigger: ACAGAAGTGTATTTGGCTCATGGTTTTGGAGTCTGGGAAGTCCAAGAGCATAGCACCAGCACCTACAAGGGTCATCTCATGGCAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503204.1
CDS CAA 90 bp AGCCGGCGGTCTGGGTCTCCGCTGCATAGAGAATTTACAGATACTTaGAATGATTTCCAGGCTGGGCTTAAGTTATTCATCACAACCTCA +
Preference number: 6 (lower is better)
Translates to: SRRSGSPLHREFTDT*NDFQAGLKLFITTS
Trigger: TGAGGTTGTGATGAATAACTTAAGCCCAGCCTGGAAATCATTCAAAGTATCTGTAAATTCTCTATGCAGCGGAGACCCAGACCGCCGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CAA 90 bp TACATCGTTGAAGAGATGGGTTTCAAATCCAGGTCGGCTTGGCCCTaGCCACGACTTCATAATGAAATTCCATGGGTGAGTGTTACCAGT +
Preference number: 6 (lower is better)
Translates to: YIVEEMGFKSRSAWP*PRLHNEIPWVSVTS
Trigger: ACTGGTAACACTCACCCATGGAATTTCATTATGAAGTCGTGGCAAGGGCCAAGCCGACCTGGATTTGAAACCCATCTCTTCAACGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 72 bp TCCTTGAATGTCGAGGTGAATTCTCCAATGAAGTCATaGTTGCCATTGGAGTCCCAGTCCCATACTATGCAC +
Preference number: 6 (lower is better)
Translates to: SLNVEVNSPMKS*LPLESQSHTMH
Trigger: GTGCATAGTATGGGACTGGGACTCCAATGGCAAGCATGACTTCATTGGAGAATTCACCTCGACATTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS GCA 72 bp AGATTCCCAGTGTGTTGGCAGCGGACTCATAAATGTTaGTCATCTTCTTCATTCTCCTCCCAGCTCTCCTTT +
Preference number: 6 (lower is better)
Translates to: RFPVCWQRTHKC*SSSSFSSQLSF
Trigger: AAAGGAGAGCTGGGAGGAGAATGAAGAAGATGAGCAACATTTATGAGTCCGCTGCCAACACACTGGGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502818.5
ENST00000512332.5
ENST00000617767.4
CDS CCA 72 bp ATCGTTGAAGAGATGGGTTTCAAATCCAGGTCGGCTTaGCCCTTGCCACGACTTCATAATGAAATTCCATGG +
Preference number: 6 (lower is better)
Translates to: IVEEMGFKSRSA*PLPRLHNEIPW
Trigger: CCATGGAATTTCATTATGAAGTCGTGGCAAGGGCCAAGCCGACCTGGATTTGAAACCCATCTCTTCAACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS TCA 72 bp GGCCCTTGCCACGACTTCATAATGAAATTCCATGGGTaGGTGTTACCAGTTTCTGGTCCATCCTTGCTTATT +
Preference number: 6 (lower is better)
Translates to: GPCHDFIMKFHG*VLPVSGPSLLI
Trigger: AATAAGCAAGGATGGACCAGAAACTGGTAACACTCACCCATGGAATTTCATTATGAAGTCGTGGCAAGGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 72 bp TCCTGCACATTCTGGGTTGTCTTCATTAAAGTTGATTaGAAAGTCATGAGAGACCGTGTACTCTGGAGGTAT +
Preference number: 6 (lower is better)
Translates to: SCTFWVVFIKVD*KVMRDRVLWRY
Trigger: ATACCTCCAGAGTACACGGTCTCTCATGACTTTGCAATCAACTTTAATGAAGACAACCCAGAATGTGCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CCA 72 bp ACTGTCACCAAAAATGGTAAAGGTGTTGCTAATCTCTaGATCCTTCGTGTCTACAAAACTGTCTGGCGTATG +
Preference number: 6 (lower is better)
Translates to: TVTKNGKGVANL*ILRVYKTVWRM
Trigger: CATACGCCAGACAGTTTTGTAGACACGAAGGATCCAGAGATTAGCAACACCTTTACCATTTTTGGTGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000505331.1
ENST00000506687.5
ENST00000511604.5
ENST00000512055.5
CDS TCA 72 bp CTGGGTCTCCGCTGCATAGAGAATTTACAGATACTTTaGATGATTTCCAGGCTGGGCTTAAGTTATTCATCA +
Preference number: 6 (lower is better)
Translates to: LGLRCIENLQIL*MISRLGLSYSS
Trigger: TGATGAATAACTTAAGCCCAGCCTGGAAATCATTCAAAGTATCTGTAAATTCTCTATGCAGCGGAGACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS TCA 72 bp CAGAGAAATCAAATATGTTGTCAAAATCTACATCGTTaGAGAGATGGGTTTCAAATCCAGGTCGGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: QRNQICCQNLHR*RDGFQIQVGLA
Trigger: GGCCAAGCCGACCTGGATTTGAAACCCATCTCTTCAACGATGTAGATTTTGACAACATATTTGATTTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CCA 72 bp TGGCCAGATGACATCTTTACTGGTATAGGTCATTGGTaGATTCGAGGATTTTCTGATTCGCAATTGGTTAAG +
Preference number: 6 (lower is better)
Translates to: WPDDIFTGIGHW*IRGFSDSQLVK
Trigger: CTTAACCAATTGCGAATCAGAAAATCCTCGAATCCACCAATGACCTATACCAGTAAAGATGTCATCTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CAA 72 bp CCAGAGAAATCAAATATGTTGTCAAAATCTACATCGTaGAAGAGATGGGTTTCAAATCCAGGTCGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: PEKSNMLSKSTS*KRWVSNPGRLG
Trigger: GCCAAGCCGACCTGGATTTGAAACCCATCTCTTCAACGATGTAGATTTTGACAACATATTTGATTTCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CAA 90 bp ACTGGTATAGGTCATTGGTGGATTCGAGGATTTTCTGATTCGCAATaGGTTAAGGAAGGGAAACTTTGTCTAAAAACTTGGGATCAGCAG +
Preference number: 6 (lower is better)
Translates to: TGIGHWWIRGFSDSQ*VKEGKLCLKTWDQQ
Trigger: CTGCTGATCCCAAGTTTTTAGACAAAGTTTCCCTTCCTTAACCAATTGCGAATCAGAAAATCCTCGAATCCACCAATGACCTATACCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS GCA 72 bp AGATTTACTGAAGAAATCCTTGTCATCCAATTTCCGTaGATTGAATGCAAGCTCAACATAGTCGTCATTGCC +
Preference number: 6 (lower is better)
Translates to: RFTEEILVIQFP*IECKLNIVVIA
Trigger: GGCAATGACGACTATGTTGAGCTTGCATTCAATGCACGGAAATTGGATGACAAGGATTTCTTCAGTAAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000429747.6
ENST00000502818.5
ENST00000511604.5
ENST00000512055.5
ENST00000512332.5
ENST00000515418.1
ENST00000617767.4
CDS CCA 72 bp AATTGGCCAGATGACATCTTTACTGGTATAGGTCATTaGTGGATTCGAGGATTTTCTGATTCGCAATTGGTT +
Preference number: 6 (lower is better)
Translates to: NWPDDIFTGIGH*WIRGFSDSQLV
Trigger: AACCAATTGCGAATCAGAAAATCCTCGAATCCACCAATGACCTATACCAGTAAAGATGTCATCTGGCCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512055.5
CDS CAA 72 bp GGTCATTGGTGGATTCGAGGATTTTCTGATTCGCAATaGGTTAAGGAAGGGAAACTTTGTCTAAAAACTTGG +
Preference number: 6 (lower is better)
Translates to: GHWWIRGFSDSQ*VKEGKLCLKTW
Trigger: CCAAGTTTTTAGACAAAGTTTCCCTTCCTTAACCAATTGCGAATCAGAAAATCCTCGAATCCACCAATGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512055.5