RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000178772

Ensembl transcript IDs: ENST00000323830.4, ENST00000429275.1

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCATGGCCCGTGACACAGACCTCAGGAGGGCCTGGGAACATGTaGCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGG +
Preference number: 1 (lower is better)
Translates to: WPWPVTQTSGGPGNM*PRWSRYSLVLYILG
Trigger: CCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAGGTCTGTGTCACGGGCCATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CCA 90 bp CCCGTGACACAGACCTCAGGAGGGCCTGGGAACATGTGCCCAAGGTaGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAG +
Preference number: 1 (lower is better)
Translates to: PVTQTSGGPGNMCPR*SRYSLVLYILGRNE
Trigger: CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAGGTCTGTGTCACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CCA 90 bp CACTGGGATGCAGTGAATAGACCTCAGGGTGTAGGTGAGAGCGGTTaGGTGTTACATAATGGGGAGGCATCAGGGCTGAGGATATTTTAT +
Preference number: 1 (lower is better)
Translates to: HWDAVNRPQGVGESG*VLHNGEASGLRIFY
Trigger: ATAAAATATCCTCAGCCCTGATGCCTCCCCATTATGTAACACCCAACCGCTCTCACCTACACCCTGAGGTCTATTCACTGCATCCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR GCA 90 bp AATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGTaGAGGGGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGT +
Preference number: 1 (lower is better)
Translates to: NVQVKIKDRGGQVLL*RGSSQQTSERERAG
Trigger: ACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCCCCTGCACAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR GCA 90 bp GGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACTCGTGTGGAGGTGGGTaGCGGCCACAGGGTCTCCCA +
Preference number: 2 (lower is better)
Translates to: GGPGNMCPRWSRYSLVLYSCGGG*RPQGLP
Trigger: TGGGAGACCCTGTGGCCGGCACCCACCTCCACACGA...GTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR CCA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTAGGAGGAGGAGACCCTaGTTAGTGGAGCAGACCAGA +
Preference number: 2 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFRRRRP*LVEQTR
Trigger: TCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCT...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR TCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGCCTGTCCCTTGCATGTaGAAAGCCAAGGCTTCGGAG +
Preference number: 2 (lower is better)
Translates to: PGCGAAFEGALQGIRMALPVPCM*KAKASE
Trigger: CTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGG...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
3UTR-3UTR GCA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTGGCCAAGTTTTATTGTaGAGGGGAAGCTCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFGQVLL*RGSSQQ
Trigger: CTGCTGAGAGCTTCCCCTGCACAATAAAACTTGGCC...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR TCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGACCTCAGGGTGTAGGTaGGAGCGGTTGGGTGTTACA +
Preference number: 2 (lower is better)
Translates to: CPRWSRYSLVLYILGRNETSGCR*ERLGVT
Trigger: TGTAACACCCAACCGCTCTCACCTACACCCTGAGGT...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR CCA 90 bp GGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACAAGACCTGGGATCAATaGAAAGGAATGTTCAGGTTA +
Preference number: 2 (lower is better)
Translates to: GGPGNMCPRWSRYSLVLYKTWDQ*KGMFRL
Trigger: TAACCTGAACATTCCTTTCCATTGATCCCAGGTCTT...GTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR CCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGTGCCCCTGTGCTTTCTaGTCATCTCTGCTTCTGTCA +
Preference number: 2 (lower is better)
Translates to: CPRWSRYSLVLYILGRNECPCAF*SSLLLS
Trigger: TGACAGAAGCAGAGATGACCAGAAAGCACAGGGGCA...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR CCA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGTCCACCCCCTCACCTTaGGGATGTAACCCTGTCCCT +
Preference number: 2 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLSTPSP*GCNPVP
Trigger: AGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGA...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR GCA 90 bp GGGCAAGTTCAAGGTAGGGCAAGGAAATATATTTGGGGGTTAAATATTTTTGCCAGAACCCTGCCCCTGTaGTTTCTGGTCATCTCTGCT +
Preference number: 2 (lower is better)
Translates to: GQVQGRARKYIWGLNIFARTLPL*FLVISA
Trigger: AGCAGAGATGACCAGAAAGCACAGGGGCAGGGTTCT...GGCAAAAATATTTAACCCCCAAATATATTTCCTTGCCCTACCTTGAACTTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR CCA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTAATGGAAACAGACACTaGGCTTTTGAGCCAGATGTC +
Preference number: 2 (lower is better)
Translates to: GSSQQTSERERAGCKLFLNGNRH*AFEPDV
Trigger: GACATCTGGCTCAAAAGCCCAGTGTCTGTTTCCATT...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR CCA 90 bp GGGCAAGTTCAAGGTAGGGCAAGGAAATATATTTGGGGGTTAAATATTTTTGCCTCCACTTTGTATCACTaGGATGCAGTGAATAGACCT +
Preference number: 2 (lower is better)
Translates to: GQVQGRARKYIWGLNIFASTLYH*DAVNRP
Trigger: AGGTCTATTCACTGCATCCCAGTGATACAAAGTGGA...GGCAAAAATATTTAACCCCCAAATATATTTCCTTGCCCTACCTTGAACTTGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CAA 90 bp TTCCAGGCTGTAGGTAAATTTAAACATTTTCTGGTTGACAATTGGTaGAGCTTAGCTGAAGACCTGGGATCAATGGAAAGGAATGTTCAG +
Preference number: 2 (lower is better)
Translates to: FQAVGKFKHFLVDNW*SLAEDLGSMERNVQ
Trigger: CTGAACATTCCTTTCCATTGATCCCAGGTCTTCAGCTAAGCTCAACCAATTGTCAACCAGAAAATGTTTAAATTTACCTACAGCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CCA 72 bp GTGGCCATGGCCCGTGACACAGACCTCAGGAGGGCCTaGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTT +
Preference number: 3 (lower is better)
Translates to: VAMARDTDLRRA*EHVPKVVEVQL
Trigger: AAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAGGTCTGTGTCACGGGCCATGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR TCA 72 bp CCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTaGAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCC +
Preference number: 3 (lower is better)
Translates to: PSPWGCNPVPCM*KAKASETQLPS
Trigger: GGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
3UTR GCA 72 bp CCCGTGACACAGACCTCAGGAGGGCCTGGGAACATGTaGCCAAGGTGGTCGAGGTACAGCTTGGTTTTATAC +
Preference number: 3 (lower is better)
Translates to: PVTQTSGGPGNM*PRWSRYSLVLY
Trigger: GTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAGGTCTGTGTCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CCA 72 bp GCAGTGAATAGACCTCAGGGTGTAGGTGAGAGCGGTTaGGTGTTACATAATGGGGAGGCATCAGGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: AVNRPQGVGESG*VLHNGEASGLR
Trigger: CCTCAGCCCTGATGCCTCCCCATTATGTAACACCCAACCGCTCTCACCTACACCCTGAGGTCTATTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CCA 72 bp CAGACCTCAGGAGGGCCTGGGAACATGTGCCCAAGGTaGTCGAGGTACAGCTTGGTTTTATACATTTTAGGG +
Preference number: 3 (lower is better)
Translates to: QTSGGPGNMCPR*SRYSLVLYILG
Trigger: CCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAGGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR TCA 72 bp GCGGTTGGGTGTTACATAATGGGGAGGCATCAGGGCTaGGGATATTTTATTCTCCAGGCTGTGGTGCAGCTT +
Preference number: 3 (lower is better)
Translates to: AVGCYIMGRHQG*GYFILQAVVQL
Trigger: AAGCTGCACCACAGCCTGGAGAATAAAATATCCTCAGCCCTGATGCCTCCCCATTATGTAACACCCAACCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CCA 72 bp AGATGTCAGAAGGCAGTGGCCTCCACTTTGTATCACTaGGATGCAGTGAATAGACCTCAGGGTGTAGGTGAG +
Preference number: 3 (lower is better)
Translates to: RCQKAVASTLYH*DAVNRPQGVGE
Trigger: CTCACCTACACCCTGAGGTCTATTCACTGCATCCCAGTGATACAAAGTGGAGGCCACTGCCTTCTGACATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR GCA 72 bp CAGAAAGGCAGGACAACTCGAAGCAGCGGGGGTGGGTaGTTCCAGGCTGTAGGTAAATTTAAACATTTTCTG +
Preference number: 3 (lower is better)
Translates to: QKGRTTRSSGGG*FQAVGKFKHFL
Trigger: CAGAAAATGTTTAAATTTACCTACAGCCTGGAAGCACCCACCCCCGCTGCTTCGAGTTGTCCTGCCTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR-3UTR CAA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTGCTTTTGAGGGTGCTTaGCAAGGCATAAGGATGGCC +
Preference number: 3 (lower is better)
Translates to: GSSQQTSERERAGCKLFLAFEGA*QGIRMA
Trigger: GGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGC...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCAGAGCGGCAGGTGCGTaGTGGCGTTGCGTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRRAAGA*WRCVAA
Trigger: GGCTGCAACGCAACGCCATCACGCACCTGCCGCTCT...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCCGGTGCCCTCGGGGTTaGTGTAGGTGCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRRCPRG*CRCTGS
Trigger: GGAGCCAGTGCACCTACAGCAACCCCGAGGGCACCG...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCCAGCGACACTGGGCCTaGTCACAGGCGAGCACCACG +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRQRHWA*SQASTT
Trigger: CGTGGTGCTCGCCTGTGACCAGGCCCAGTGTCGCTG...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCTCCAGGGAGCATCGTaGGGGCCGAGCGGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMLQGAS*GPSGWR
Trigger: GCGCCACCCGCTCGGCCCTCACGATGCTCCCTGGAG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000429275.1
CDS-3UTR GCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCCGGGTGGCGCCGGGCTaGCCTGTCTTCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRRVAPG*PVFLRS
Trigger: GCTCCTGAGGAAGACAGGGCAGCCCGGCGCCACCCG...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCTCGAAGCAGCGGGGGTaGGTGCTTCCAGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRSKQRG*VLPGCR
Trigger: CCTACAGCCTGGAAGCACCCACCCCCGCTGCTTCGA...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCACTGCTGCAGCCAGTTaGAGAGGTAGGCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRTAAAS*RGRPGG
Trigger: GCCACCTGGCCTACCTCTTCAACTGGCTGCAGCAGT...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCGGCAGGGCCTGGAGCTaGTTCCCCTGCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRGRAWS*FPCRWR
Trigger: CCTCCACCTGCAGGGGAACCAGCTCCAGGCCCTGCC...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCACTCCTGGGCAGGGCCTaGAGCTGGTTCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLALLGRA*SWFPCR
Trigger: CCTGCAGGGGAACCAGCTCCAGGCCCTGCCCAGGAG...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAACCAGGCACGGGGTGTaGGCAAAGAGGCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLATRHGV*AKRPAG
Trigger: GCCTGCCGGCCTCTTTGCCCACACCCCGTGCCTGGT...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCACCAAGTGGTCCCGGGTaGCGGGACACACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAPSGPG*RDTPAA
Trigger: AGCAGCTGGTGTGTCCCGTCACCCGGGACCACTTGG...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCCCCAGGGAGCCCTGCTaGGGAGAGAGCTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTPREPC*GESWTF
Trigger: GAACGTCCAGCTCTCTCCTCAGCAGGGCTCCCTGGG...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCACGGTGCCCTCGGGGTTaGTGTAGGTGCACTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLARCPRG*CRCTGS
Trigger: GGAGCCAGTGCACCTACAGCAACCCCGAGGGCACCG...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCAGGCGAGCACCACGGTaGCCTCGGGGTTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTRRAPR*PRGCCR
Trigger: CCTACAGCAACCCCGAGGGCACCGTGGTGCTCGCCT...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCTCCTGGGCAGGGCCTaGAGCTGGTTCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMLLGRA*SWFPCR
Trigger: CCTGCAGGGGAACCAGCTCCAGGCCCTGCCCAGGAG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCTCCGGCCACGTGACCTaGAAGCCCAAGTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTSGHVT*KPKWSR
Trigger: CCGGGACCACTTGGGCTTCCAGGTCACGTGGCCGGA...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATCCGGCCACGTGACCTaGAAGCCCAAGTGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLASGHVT*KPKWSR
Trigger: CCGGGACCACTTGGGCTTCCAGGTCACGTGGCCGGA...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAGGGTCTGCAGGCTGGTaGGTGGGTGGAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAGSAGW*VGGTAP
Trigger: AGGAGCTGTTCCACCCACTCACCAGCCTGCAGACCC...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTCCAAGTGGTCCCGGGTaGCGGGACACACCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLPSGPG*RDTPAA
Trigger: AGCAGCTGGTGTGTCCCGTCACCCGGGACCACTTGG...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCTCCAGGGCAGCCAGGTaGTGGAAAAGACCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTSRAAR*WKRPSG
Trigger: GCCCGAGGGTCTTTTCCAGCACCTGGCTGCCCTGGA...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCTGGAGCTGGTTCCCCTaGAGGTGGAGGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRWSWFP*RWRDSR
Trigger: CCTGGAGTCCCTCCACCTGCAGGGGAACCAGCTCCA...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAATCCCAGCTGCCCCCTaGCTTGCTTTCGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAIPAAP*LAFVRP
Trigger: TGGCCGGACGAAAGCAAGGCAGGGGGCAGCTGGGAT...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCGCGACAGTCTCCAGCTaGTTATGGGTCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRATVSS*LWVRDR
Trigger: CCTGTCTCTGACCCATAACCAGCTGGAGACTGTCGC...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCACGCAGGTTGGACAGGTaGGCAAAGGTGCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLARRLDR*AKVPSA
Trigger: CGCTGAGGGCACCTTTGCCCACCTGTCCAACCTGCG...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCCGCAGGTTGGACAGGTaGGCAAAGGTGCCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTRRLDR*AKVPSA
Trigger: CGCTGAGGGCACCTTTGCCCACCTGTCCAACCTGCG...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCTGCCCTCCGGAAGTGTaGTCAGCTGGTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRCPPEV*SAGSWR
Trigger: TCTCCAAGAACCAGCTGACCACACTTCCGGAGGGCA...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCTTCAGCCAGCGACACTaGGCCTGGTCACAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTFSQRH*AWSQAS
Trigger: GCTCGCCTGTGACCAGGCCCAGTGTCGCTGGCTGAA...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGTCCTCGTGTGGAGGTaGGTGCCGGCCACAGGGTCT +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLVLVWR*VPATGS
Trigger: AGACCCTGTGGCCGGCACCCACCTCCACACGAGGAC...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCAGAAGCTACTGCCTGTaGCCTCCAGGTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTRSYCL*PPGPPA
Trigger: GGCTGGAGGACCTGGAGGTCACAGGCAGTAGCTTCT...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTGGGTCTGCAGGCTGGTaGGTGGGTGGAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACGSAGW*VGGTAP
Trigger: AGGAGCTGTTCCACCCACTCACCAGCCTGCAGACCC...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCTTTCGTCCGGCCACGTaGCCTGGAAGCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRFRPAT*PGSPSG
Trigger: ACCACTTGGGCTTCCAGGTCACGTGGCCGGACGAAA...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCGCTCCGAGATGTTGTTaGTGTCCAGGAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRAPRCC*CPGRAP
Trigger: AGGAGCTCTTCCTGGACAGCAACAACATCTCGGAGC...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGAGGTGGCAGTCGCACTaGCAGGGGTTACCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMRWQSH*QGLPCR
Trigger: CCTGCACGGTAACCCCTGGCAGTGCGACTGCCACCT...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTATCCCAGCTGCCCCCTaGCTTGCTTTCGTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACIPAAP*LAFVRP
Trigger: TGGCCGGACGAAAGCAAGGCAGGGGGCAGCTGGGAT...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCGGGCTGCCCTTTCCTaGACAGCCAGATCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMRAALS*TARSQL
Trigger: CAGCTGGGATCTGGCTGTGCAGGAAAGGGCAGCCCG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCCTGCTACTAGGGCCCTaGTGCCCGAGCCTCGATAGA +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTLLLGP*CPSLDR
Trigger: TCTATCGAGGCTCGGGCAGCAGGGCCCTAGTAGCAG...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGAGCAGTCACAACCCATaGGACAGGGCTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMSSHNP*DRAGQA
Trigger: GGCCTGCCCAGCCCTGTCCCATGGGTTGTGACTGCT...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTGGCGGGATGTCCAGTaGGACGGTGGCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMWRDVQ*DGGKLL
Trigger: GAGGAGCTTGCCACCGTCCCACTGGACATCCCGCCA...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTACCTGGAAGCCCAAGTaGTCCCGGGTGACGGGACAC +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACTWKPK*SRVTGH
Trigger: GTGTCCCGTCACCCGGGACCACTTGGGCTTCCAGGT...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCGGCAAGCTCCTCATCTaGGCAGAACACCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRGKLLI*AEHLLD
Trigger: GTCCAGGAGGTGTTCTGCTCAGATGAGGAGCTTGCC...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGAGAGCGGCAGGTGCGTaGTGGCGTTGCGTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALRAAGA*WRCVAA
Trigger: GGCTGCAACGCAACGCCATCACGCACCTGCCGCTCT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCCATTGTATGAGAGCATaGGGGAACGCAGGTTGGACA +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRHCMRA*GNAGWT
Trigger: TGTCCAACCTGCGTTCCCTCATGCTCTCATACAATG...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCTCAGCTTCAGGGTCTaGAGGCTGGTGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMLSFRV*RLVSGW
Trigger: CCACCCACTCACCAGCCTGCAGACCCTGAAGCTGAG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCTCCAGGAAGAGCTCCTaGAGGCTGCCCAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRSRKSS*RLPSLP
Trigger: TGGCAAACTGGGCAGCCTGCAGGAGCTCTTCCTGGA...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCGTGATGGCGTTGCGTTaGAGCCACAGCCTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTVMALR*SHSLSR
Trigger: CCTAGAGAGGCTGTGGCTGCAACGCAACGCCATCAC...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGATGGAGAGCGGCAGGTaGGTGATGGCGTTGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMMESGR*VMALRC
Trigger: GCAACGCAACGCCATCACGCACCTGCCGCTCTCCAT...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCACAGGTGGGCAAAGGTaGCCTCAGCGACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRTGGQR*PQRQSP
Trigger: TGGAGACTGTCGCTGAGGGCACCTTTGCCCACCTGT...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTTGCCAGGGGTTACCGTaGAGGGCCAGGTTGAACAGG +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLCQGLP*RARLNR
Trigger: CCTGTTCAACCTGGCCCTGCACGGTAACCCCTGGCA...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGAGGCGAGCACCACGGTaGCCTCGGGGTTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALRRAPR*PRGCCR
Trigger: CCTACAGCAACCCCGAGGGCACCGTGGTGCTCGCCT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCTACTAGGGCCCTGCTaGCCGAGCCTCGATAGACAC +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMLLGPC*PSLDRH
Trigger: GTGTCTATCGAGGCTCGGGCAGCAGGGCCCTAGTAG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTCTGCTACTAGGGCCCTaGTGCCCGAGCCTCGATAGA +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLLLLGP*CPSLDR
Trigger: TCTATCGAGGCTCGGGCAGCAGGGCCCTAGTAGCAG...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCCGCCAGTCAGAACCCTaGCCCTGTGCTTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRRQSEP*PCAFWS
Trigger: TGACCAGAAAGCACAGGGGCAGGGTTCTGACTGGCG...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTCGTGTGGAGGTGGGTaGCGGCCACAGGGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALSCGGG*RPQGLP
Trigger: TGGGAGACCCTGTGGCCGGCACCCACCTCCACACGA...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAGAGCAGAGAGGAGTCTaGTGTGGCCTGTGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAEQRGV*CGLWSA
Trigger: AGCTGACCACAGGCCACACCAGACTCCTCTCTGCTC...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCTGTCCAGTGGGACGGTaGCAAGCTCCTCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRCPVGR*QAPHLS
Trigger: GCTCAGATGAGGAGCTTGCCACCGTCCCACTGGACA...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGAGGGCAGCCAGGTGCTaGAAAAGACCCTCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMRAARC*KRPSGR
Trigger: TCTGCCCGAGGGTCTTTTCCAGCACCTGGCTGCCCT...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCTGGGCCAGGAGGTTCTaGGCCAGGTTGAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRWARRF*ARLSVF
Trigger: GAAGACACTCAACCTGGCCCAGAACCTCCTGGCCCA...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGGGCCAGGAGGTTCTaGGCCAGGTTGAGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAWARRF*ARLSVF
Trigger: GAAGACACTCAACCTGGCCCAGAACCTCCTGGCCCA...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCATGCCAGCTGGGAGGTaGGTAATGGCATTGTATGAG +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRMPAGR*VMALYE
Trigger: CTCATACAATGCCATTACCCACCTCCCAGCTGGCAT...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATCCACCCCCTCACCTTaGGGATGTAACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLASTPSP*GCNPVP
Trigger: AGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGA...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCTCCACCCCCTCACCTTaGGGATGTAACCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRSTPSP*GCNPVP
Trigger: AGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGA...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGACTCCTCCAGGTCTCTaGAGATGCCAGCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMTPPGL*RCQLGG
Trigger: ACCTCCCAGCTGGCATCTTCAGAGACCTGGAGGAGT...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTACTCCTCCAGGTCTCTaGAGATGCCAGCTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACTPPGL*RCQLGG
Trigger: ACCTCCCAGCTGGCATCTTCAGAGACCTGGAGGAGT...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCCCAGGTAGAGTTTaGCCAACTCCTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLACPGRV*PTPPGL
Trigger: GAGACCTGGAGGAGTTGGTCAAACTCTACCTGGGCA...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCCGTGCAGGGCCAGGTTaGACAGGTTGTAGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRRAGPG*TGCSWC
Trigger: ACACCAACTACAACCTGTTCAACCTGGCCCTGCACG...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCCCTGTCCCTTGCATGTaGAAAGCCAAGGCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTPVPCM*KAKASE
Trigger: CTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGG...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAACCTCAGGGTGTAGGTaGGAGCGGTTGGGTGTTACA +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLATSGCR*ERLGVT
Trigger: TGTAACACCCAACCGCTCTCACCTACACCCTGAGGT...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCTTGGTTGAGCTTAGCTaGAGACCTGGGATCAATGGA +
Preference number: 4 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRLVELS*RPGING
Trigger: TCCATTGATCCCAGGTCTTCAGCTAAGCTCAACCAA...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCCAGAGAGCGCGTTGTTaGTCAGCTTCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRQRARC*SASGSA
Trigger: TGCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTG...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTTCCAGGAAGAGCTCCTaGAGGCTGCCCAGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACSRKSS*RLPSLP
Trigger: TGGCAAACTGGGCAGCCTGCAGGAGCTCTTCCTGGA...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCAGCCGATCGGTGTACTaGTGCAGCCAGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTSRSVY*CSQLKR
Trigger: CCTCTTCAACTGGCTGCAGCAGTACACCGATCGGCT...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGCGGGCTGCCCTTTCCTaGACAGCCAGATCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALRAALS*TARSQL
Trigger: CAGCTGGGATCTGGCTGTGCAGGAAAGGGCAGCCCG...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCGAGCAGAACACCTCCTaGACGAAGCAGTCACAACCC +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTEQNTS*TKQSQP
Trigger: GGGTTGTGACTGCTTCGTCCAGGAGGTGTTCTGCTC...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTAGGCAGGGCCTGGAGCTaGTTCCCCTGCAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLGRAWS*FPCRWR
Trigger: CCTCCACCTGCAGGGGAACCAGCTCCAGGCCCTGCC...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAGCGACAGTCTCCAGCTaGTTATGGGTCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAATVSS*LWVRDR
Trigger: CCTGTCTCTGACCCATAACCAGCTGGAGACTGTCGC...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGTTCTGGAAGAGGGCTaGGTGCAGCGCCGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLVLEEG*VQRRKV
Trigger: AACCTTACGGCGCTGCACCCAGCCCTCTTCCAGAAC...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCCCTCCGGAAGTGTaGTCAGCTGGTTCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLACPPEV*SAGSWR
Trigger: TCTCCAAGAACCAGCTGACCACACTTCCGGAGGGCA...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGACCTGGAAGCCCAAGTaGTCCCGGGTGACGGGACAC +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALTWKPK*SRVTGH
Trigger: GTGTCCCGTCACCCGGGACCACTTGGGCTTCCAGGT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTCAGCCAGCGACACTaGGCCTGGTCACAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALFSQRH*AWSQAS
Trigger: GCTCGCCTGTGACCAGGCCCAGTGTCGCTGGCTGAA...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGGGTTCTGGGCCAGGTTaGGTGTCTTCAGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMGSGPG*VSSDGS
Trigger: TGACCCATCTGAAGACACTCAACCTGGCCCAGAACC...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTTGCCCAGGTAGAGTTTaGCCAACTCCTCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACCPGRV*PTPPGL
Trigger: GAGACCTGGAGGAGTTGGTCAAACTCTACCTGGGCA...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGACTGCTGCAGCCAGTTaGAGAGGTAGGCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALTAAAS*RGRPGG
Trigger: GCCACCTGGCCTACCTCTTCAACTGGCTGCAGCAGT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCCTGTGGTGCAGCTTTTaGGGGTGCTTTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRLWCSF*GCFARH
Trigger: ATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAG...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCAGAGAGCGCGTTGTTaGTCAGCTTCAGGGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMQRARC*SASGSA
Trigger: TGCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGGCAGGCTGCCCAGTTTaGCAAACACACCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALAGCPV*QTHPGG
Trigger: TCCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGC...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp GGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACCTACTAGGGCCCTGCTaGCCGAGCCTCGATAGACAC +
Preference number: 4 (lower is better)
Translates to: GGPGNMCPRWSRYSLVLYLLGPC*PSLDRH
Trigger: GTGTCTATCGAGGCTCGGGCAGCAGGGCCCTAGTAG...GTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGGAGAGGAGTCTGGTGTaGCCTGTGGTCAGCTCAATC +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMERSLV*PVVSSI
Trigger: GATTGAGCTGACCACAGGCCACACCAGACTCCTCTC...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTGCCAAACACACCCTaGGGGAGACCAGAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALLPNTP*GRPESA
Trigger: CGCGCTCTCTGGTCTCCCCCAGGGTGTGTTTGGCAA...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGTCTCCAGCTGGTTATaGGTCAGAGACAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLVSSWL*VRDRPT
Trigger: GGTTGGCCTGTCTCTGACCCATAACCAGCTGGAGAC...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTACAGCGACACTGGGCCTaGTCACAGGCGAGCACCACG +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLQRHWA*SQASTT
Trigger: CGTGGTGCTCGCCTGTGACCAGGCCCAGTGTCGCTG...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGAGGAGGAGGAGACCCTaGTTAGTGGAGCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMRRRRP*LVEQTR
Trigger: TCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCT...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGAGCTTAGTCCTCGTGTaGAGGTGGGTGCCGGCCACA +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALSLVLV*RWVPAT
Trigger: TGTGGCCGGCACCCACCTCCACACGAGGACTAAGCT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAGGTAATGGCATTGTATaGGAGCATGAGGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAGNGIV*EHEGTQ
Trigger: CTGCGTTCCCTCATGCTCTCATACAATGCCATTACC...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGCGGGTGGCGCCGGGCTaGCCTGTCTTCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNERVAPG*PVFLRS
Trigger: GCTCCTGAGGAAGACAGGGCAGCCCGGCGCCACCCG...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGGCTCCGAGATGTTGTTaGTGTCCAGGAAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMAPRCC*CPGRAP
Trigger: AGGAGCTCTTCCTGGACAGCAACAACATCTCGGAGC...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTGGAAGAGGGCTGGGTaGAGCGCCGTAAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALWKRAG*SAVRLL
Trigger: CAACAACCTTACGGCGCTGCACCCAGCCCTCTTCCA...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTAGTTGGTGTCGAAGATaGCCTCCGGAAGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACSWCRR*PPEVWS
Trigger: TGACCACACTTCCGGAGGGCATCTTCGACACCAACT...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTAGCCGATCGGTGTACTaGTGCAGCCAGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFSRSVY*CSQLKR
Trigger: CCTCTTCAACTGGCTGCAGCAGTACACCGATCGGCT...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp GGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACACGGGACACACCAGCTaGTTCTCATTCAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GGPGNMCPRWSRYSLVLYTGHTS*FSFKAG
Trigger: GCCCGCCTTGAATGAGAAGCAGCTGGTGTGTCCCGT...GTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGACGGGACACACCAGCTaGTTCTCATTCAAGGCGGGC +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALTGHTS*FSFKAG
Trigger: GCCCGCCTTGAATGAGAAGCAGCTGGTGTGTCCCGT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTGTCCAGTGGGACGGTaGCAAGCTCCTCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALCPVGR*QAPHLS
Trigger: GCTCAGATGAGGAGCTTGCCACCGTCCCACTGGACA...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCCCACCTTGGTCAAGTTaGGGTTACTGCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRPPWSS*GYCQKL
Trigger: GAGCTTTTGGCAGTAACCCCAACTTGACCAAGGTGG...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCATGCCAGCTGGGAGGTaGGTAATGGCATTGTATGAG +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRMPAGR*VMALYE
Trigger: CTCATACAATGCCATTACCCACCTCCCAGCTGGCAT...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACGTTCTGGAAGAGGGCTaGGTGCAGCGCCGTAAGGTT +
Preference number: 4 (lower is better)
Translates to: GGPGNMCPRWSRYSLVLYVLEEG*VQRRKV
Trigger: AACCTTACGGCGCTGCACCCAGCCCTCTTCCAGAAC...GTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTCATTGTATGAGAGCATaGGGGAACGCAGGTTGGACA +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACHCMRA*GNAGWT
Trigger: TGTCCAACCTGCGTTCCCTCATGCTCTCATACAATG...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTCTCAGGTCCCACTCCTaGCTAGCATTGTACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFLRSHS*LALYCS
Trigger: ACTGCAGTACAATGCTAGTCAGGAGTGGGACCTGAG...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTAGCAGGCTGCCCAGTTTaGCAAACACACCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLAGCPV*QTHPGG
Trigger: TCCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGC...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCGATGTTTTTCGTATATaGCGGGATGTCCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRDVFRI*RDVQWD
Trigger: GTCCCACTGGACATCCCGCCATATACGAAAAACATC...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCCACCTTGGTCAAGTTaGGGTTACTGCCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMPPWSS*GYCQKL
Trigger: GAGCTTTTGGCAGTAACCCCAACTTGACCAAGGTGG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGACCAGGCACGGGGTGTaGGCAAAGAGGCCGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNETRHGV*AKRPAG
Trigger: GCCTGCCGGCCTCTTTGCCCACACCCCGTGCCTGGT...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGTAGGTGAGAGCGGTTaGGTGTTACATAATGGGGAG +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLVGESG*VLHNGE
Trigger: CTCCCCATTATGTAACACCCAACCGCTCTCACCTAC...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTGGTAATGGCATTGTATaGGAGCATGAGGGAACGCAG +
Preference number: 4 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFGNGIV*EHEGTQ
Trigger: CTGCGTTCCCTCATGCTCTCATACAATGCCATTACC...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTCCCAGGGAGCCCTGCTaGGGAGAGAGCTGGACGTTC +
Preference number: 4 (lower is better)
Translates to: GSSQQTSERERAGCKLFLPREPC*GESWTF
Trigger: GAACGTCCAGCTCTCTCCTCAGCAGGGCTCCCTGGG...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGCTGTGGTGCAGCTTTTaGGGGTGCTTTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALLWCSF*GCFARH
Trigger: ATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAG...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGCAGACACTGGGCTTTTaGGCCAGATGTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALQTLGF*ARCQKA
Trigger: TGCCTTCTGACATCTGGCTCAAAAGCCCAGTGTCTG...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCTCAAGTTGGGGTTACTaGCAAAAGCTCTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTSSWGY*QKLWFP
Trigger: TGGAAACCAGAGCTTTTGGCAGTAACCCCAACTTGA...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCGAAGCATGTTCCACTaGAAGCTCAGAAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMRSMFH*KLRKVR
Trigger: TCTGACCTTTCTGAGCTTGCAGTGGAACATGCTTCG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTATGGAAGAGGGCTGGGTaGAGCGCCGTAAGGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLWKRAG*SAVRLL
Trigger: CAACAACCTTACGGCGCTGCACCCAGCCCTCTTCCA...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGAGTTGGTGTCGAAGATaGCCTCCGGAAGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALSWCRR*PPEVWS
Trigger: TGACCACACTTCCGGAGGGCATCTTCGACACCAACT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTACGTGCAGGGCCAGGTTaGACAGGTTGTAGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLRAGPG*TGCSWC
Trigger: ACACCAACTACAACCTGTTCAACCTGGCCCTGCACG...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTACCTGTCCCTTGCATGTaGAAAGCCAAGGCTTCGGAG +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLPVPCM*KAKASE
Trigger: CTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGG...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTTCAAGTTGGGGTTACTaGCAAAAGCTCTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLSSWGY*QKLWFP
Trigger: TGGAAACCAGAGCTTTTGGCAGTAACCCCAACTTGA...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGTGGAGCTGGTTCCCCTaGAGGTGGAGGGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNEWSWFP*RWRDSR
Trigger: CCTGGAGTCCCTCCACCTGCAGGGGAACCAGCTCCA...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTAGCAGTCACAACCCATaGGACAGGGCTGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSQQTSERERAGCKLFLSSHNP*DRAGQA
Trigger: GGCCTGCCCAGCCCTGTCCCATGGGTTGTGACTGCT...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTGATGTTTTTCGTATATaGCGGGATGTCCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFDVFRI*RDVQWD
Trigger: GTCCCACTGGACATCCCGCCATATACGAAAAACATC...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTAGTCTCCAGCTGGTTATaGGTCAGAGACAGGCCAACC +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLVSSWL*VRDRPT
Trigger: GGTTGGCCTGTCTCTGACCCATAACCAGCTGGAGAC...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTAAGGAGGAGGAGACCCTaGTTAGTGGAGCAGACCAGA +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLRRRRP*LVEQTR
Trigger: TCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCT...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CCA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCTCCACTTTGTATCACTaGGATGCAGTGAATAGACCT +
Preference number: 4 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTSTLYH*DAVNRP
Trigger: AGGTCTATTCACTGCATCCCAGTGATACAAAGTGGA...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACTGCCCCTGTGCTTTCTaGTCATCTCTGCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GGPGNMCPRWSRYSLVLYCPCAF*SSLLLS
Trigger: TGACAGAAGCAGAGATGACCAGAAAGCACAGGGGCA...GTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTAGGTCTCCACAAAGATaGTGTTTTTCGTATATGGCG +
Preference number: 4 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACRSPQR*CFSYMA
Trigger: CGCCATATACGAAAAACATCATCTTTGTGGAGACCT...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTAGGTCTCCACAAAGATaGTGTTTTTCGTATATGGCG +
Preference number: 4 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLRSPQR*CFSYMA
Trigger: CGCCATATACGAAAAACATCATCTTTGTGGAGACCT...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTAGAAGCTACTGCCTGTaGCCTCCAGGTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GSSQQTSERERAGCKLFLRSYCL*PPGPPA
Trigger: GGCTGGAGGACCTGGAGGTCACAGGCAGTAGCTTCT...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp GGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACAGAAGATGTTGGTGCTaGGGTTCAAGAAGCTACTGC +
Preference number: 4 (lower is better)
Translates to: GGPGNMCPRWSRYSLVLYRRCWC*GSRSYC
Trigger: GCAGTAGCTTCTTGAACCTCAGCACCAACATCTTCT...GTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGAGAAGATGTTGGTGCTaGGGTTCAAGAAGCTACTGC +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALRRCWC*GSRSYC
Trigger: GCAGTAGCTTCTTGAACCTCAGCACCAACATCTTCT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR TCA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTACTCAGGTCCCACTCCTaGCTAGCATTGTACTGCAGT +
Preference number: 4 (lower is better)
Translates to: GCGAAFEGALQGIRMALLLRSHS*LALYCS
Trigger: ACTGCAGTACAATGCTAGTCAGGAGTGGGACCTGAG...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR GCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGCTCAGCTTCAGGGTCTaGAGGCTGGTGAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNELSFRV*RLVSGW
Trigger: CCACCCACTCACCAGCCTGCAGACCCTGAAGCTGAG...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGTGCCAGGGGTTACCGTaGAGGGCCAGGTTGAACAGG +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNECQGLP*RARLNR
Trigger: CCTGTTCAACCTGGCCCTGCACGGTAACCCCTGGCA...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTGGCAAGCTCCTCATCTaGGCAGAACACCTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: GSSQQTSERERAGCKLFLGKLLI*AEHLLD
Trigger: GTCCAGGAGGTGTTCTGCTCAGATGAGGAGCTTGCC...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGACAGGTGGGCAAAGGTaGCCTCAGCGACAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNETGGQR*PQRQSP
Trigger: TGGAGACTGTCGCTGAGGGCACCTTTGCCCACCTGT...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGAATGGAAACAGACACTaGGCTTTTGAGCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: PGCGAAFEGALQGIRMALNGNRH*AFEPDV
Trigger: GACATCTGGCTCAAAAGCCCAGTGTCTGTTTCCATT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGCTAAACTGGCAGAGCTaGGTGTTGAGGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNELNWQS*VLRKTT
Trigger: GGTGGTCTTCCTCAACACTCAGCTCTGCCAGTTTAG...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGAGGTGGCAGTCGCACTaGCAGGGGTTACCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLRWQSH*QGLPCR
Trigger: CCTGCACGGTAACCCCTGGCAGTGCGACTGCCACCT...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGTGGCGGGATGTCCAGTaGGACGGTGGCAAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLWRDVQ*DGGKLL
Trigger: GAGGAGCTTGCCACCGTCCCACTGGACATCCCGCCA...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CAA 72 bp CCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTaGGTTTTATACATTTTAGGGAGGAATGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: PGNMCPRWSRYS*VLYILGRNEAS
Trigger: TGATGCCTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGTTTCGTCCGGCCACGTaGCCTGGAAGCCCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLFRPAT*PGSPSG
Trigger: ACCACTTGGGCTTCCAGGTCACGTGGCCGGACGAAA...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTGGGAGGCATCAGGGCTaGGGATATTTTATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSSQQTSERERAGCKLFLGRHQG*GYFILQ
Trigger: CTGGAGAATAAAATATCCTCAGCCCTGATGCCTCCC...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGGGCCAAGTTTTATTGTaGAGGGGAAGCTCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNEGQVLL*RGSSQQ
Trigger: CTGCTGAGAGCTTCCCCTGCACAATAAAACTTGGCC...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGAGGGCAGCCAGGTGCTaGAAAAGACCCTCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLRAARC*KRPSGR
Trigger: TCTGCCCGAGGGTCTTTTCCAGCACCTGGCTGCCCT...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp GGGCAAGTTCAAGGTAGGGCAAGGAAATATATTTGGGGGTTAAATATTTTTGCCGGTTCTGGGCCAGGTTaGGTGTCTTCAGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: GQVQGRARKYIWGLNIFAGSGPG*VSSDGS
Trigger: TGACCCATCTGAAGACACTCAACCTGGCCCAGAACC...GGCAAAAATATTTAACCCCCAAATATATTTCCTTGCCCTACCTTGAACTTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTGATGTCAGAAGGCAGTaGCCTCCACTTTGTATCACT +
Preference number: 4 (lower is better)
Translates to: GSSQQTSERERAGCKLFLDVRRQ*PPLCIT
Trigger: AGTGATACAAAGTGGAGGCCACTGCCTTCTGACATC...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGATTCTGAGCCAAATATaGGTGGCCATGGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLILSQI*VAMARD
Trigger: GTCACGGGCCATGGCCACTCATATTTGGCTCAGAAT...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGAGAACCCTGCCCCTGTaGTTTCTGGTCATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLRTLPL*FLVISA
Trigger: AGCAGAGATGACCAGAAAGCACAGGGGCAGGGTTCT...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGGCAAGTTCAAGGTAGGGCAAGGAAATATATTTGGGGGTTAAATATTTTTGCCAAATATGAGTGGCCATaGCCCGTGACACAGACCTCA +
Preference number: 4 (lower is better)
Translates to: GQVQGRARKYIWGLNIFAKYEWP*PVTQTS
Trigger: TGAGGTCTGTGTCACGGGCCATGGCCACTCATATTT...GGCAAAAATATTTAACCCCCAAATATATTTCCTTGCCCTACCTTGAACTTGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR TCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGAAGAAATACATTGGTTaGGTTCAGAAAGGCAGGACA +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNEKKYIG*VQKGRT
Trigger: TGTCCTGCCTTTCTGAACTCAACCAATGTATTTCTT...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGCTTTCTGGTCATCTCTaGTTCTGTCACATCCTTTTT +
Preference number: 4 (lower is better)
Translates to: CPRWSRYSLVLYILGRNELSGHL*FCHILF
Trigger: AAAAAGGATGTGACAGAAGCAGAGATGACCAGAAAG...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR GCA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGCGAAGCATGTTCCACTaGAAGCTCAGAAAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLRSMFH*KLRKVR
Trigger: TCTGACCTTTCTGAGCTTGCAGTGGAACATGCTTCG...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CCA 90 bp GGGCAAGTTCAAGGTAGGGCAAGGAAATATATTTGGGGGTTAAATATTTTTGCCAAGACCTGGGATCAATaGAAAGGAATGTTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: GQVQGRARKYIWGLNIFAKTWDQ*KGMFRL
Trigger: TAACCTGAACATTCCTTTCCATTGATCCCAGGTCTT...GGCAAAAATATTTAACCCCCAAATATATTTCCTTGCCCTACCTTGAACTTGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000323830.4
3UTR CAA 72 bp GTAGGTAAATTTAAACATTTTCTGGTTGACAATTGGTaGAGCTTAGCTGAAGACCTGGGATCAATGGAAAGG +
Preference number: 4 (lower is better)
Translates to: VGKFKHFLVDNW*SLAEDLGSMER
Trigger: CCTTTCCATTGATCCCAGGTCTTCAGCTAAGCTCAACCAATTGTCAACCAGAAAATGTTTAAATTTACCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS GCA 90 bp CAGGCTCCAGGGAGCATCGTGAGGGCCGAGCGGGTGGCGCCGGGCTaGCCTGTCTTCCTCAGGAGCAGAGAGGAGTCTGGTGTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: QAPGSIVRAERVAPG*PVFLRSREESGVAC
Trigger: ACAGGCCACACCAGACTCCTCTCTGCTCCTGAGGAAGACAGGGCAGCCCGGCGCCACCCGCTCGGCCCTCACGATGCTCCCTGGAGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429275.1
CDS GCA 90 bp GCTCCAGGGAGCATCTTCGTGAGGGCCGAGCGGGTGGCGCCGGGCTaGCCTGTCTTCCTCAGGAGCAGAGAGGAGTCTGGTGTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: APGSIFVRAERVAPG*PVFLRSREESGVAC
Trigger: ACAGGCCACACCAGACTCCTCTCTGCTCCTGAGGAAGACAGGGCAGCCCGGCGCCACCCGCTCGGCCCTCACGAAGATGCTCCCTGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS GCA 90 bp CCTGGTCACAGGCGAGCACCACGGTGCCCTCGGGGTTGCTGTAGGTaGACTGGCTCCGGGCTGCCCTTTCCTGCACAGCCAGATCCCAGC +
Preference number: 5 (lower is better)
Translates to: PGHRRAPRCPRGCCR*TGSGLPFPAQPDPS
Trigger: GCTGGGATCTGGCTGTGCAGGAAAGGGCAGCCCGGAGCCAGTGCACCTACAGCAACCCCGAGGGCACCGTGGTGCTCGCCTGTGACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp GACACTGGGCCTGGTCACAGGCGAGCACCACGGTGCCCTCGGGGTTaGTGTAGGTGCACTGGCTCCGGGCTGCCCTTTCCTGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: DTGPGHRRAPRCPRG*CRCTGSGLPFPAQP
Trigger: TGGCTGTGCAGGAAAGGGCAGCCCGGAGCCAGTGCACCTACAGCAACCCCGAGGGCACCGTGGTGCTCGCCTGTGACCAGGCCCAGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp CGTTCAGCCAGCGACACTGGGCCTGGTCACAGGCGAGCACCACGGTaGCCTCGGGGTTGCTGTAGGTGCACTGGCTCCGGGCTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: RSASDTGPGHRRAPR*PRGCCRCTGSGLPF
Trigger: AAAGGGCAGCCCGGAGCCAGTGCACCTACAGCAACCCCGAGGGCACCGTGGTGCTCGCCTGTGACCAGGCCCAGTGTCGCTGGCTGAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp CCCTGGGGGAGACCAGAGAGCGCGTTGTTGCTCAGCTTCAGGGTCTaGAGGCTGGTGAGTGGGTGGAACAGCTCCTCCGGGAGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PWGRPESALLLSFRV*RLVSGWNSSSGSWA
Trigger: GGCCCAGCTCCCGGAGGAGCTGTTCCACCCACTCACCAGCCTGCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTGGTCTCCCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp GCTCCGGGCTGCCCTTTCCTGCACAGCCAGATCCCAGCTGCCCCCTaGCTTGCTTTCGTCCGGCCACGTGACCTGGAAGCCCAAGTGGTC +
Preference number: 5 (lower is better)
Translates to: APGCPFLHSQIPAAP*LAFVRPRDLEAQVV
Trigger: GACCACTTGGGCTTCCAGGTCACGTGGCCGGACGAAAGCAAGGCAGGGGGCAGCTGGGATCTGGCTGTGCAGGAAAGGGCAGCCCGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp GGCCCCCTTCCCCAGCTCCTGTATGCGCTGCTACTAGGGCCCTGCTaGCCGAGCCTCGATAGACACGGTGAGCCGCAGAGAACCGCAGCT +
Preference number: 5 (lower is better)
Translates to: GPLPQLLYALLLGPC*PSLDRHGEPQRTAA
Trigger: AGCTGCGGTTCTCTGCGGCTCACCGTGTCTATCGAGGCTCGGGCAGCAGGGCCCTAGTAGCAGCGCATACAGGAGCTGGGGAAGGGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 90 bp AGATCCCAGCTGCCCCCTGCCTTGCTTTCGTCCGGCCACGTGACCTaGAAGCCCAAGTGGTCCCGGGTGACGGGACACACCAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RSQLPPALLSSGHVT*KPKWSRVTGHTSCF
Trigger: GAAGCAGCTGGTGTGTCCCGTCACCCGGGACCACTTGGGCTTCCAGGTCACGTGGCCGGACGAAAGCAAGGCAGGGGGCAGCTGGGATCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 90 bp CCCCCTGCCTTGCTTTCGTCCGGCCACGTGACCTGGAAGCCCAAGTaGTCCCGGGTGACGGGACACACCAGCTGCTTCTCATTCAAGGCG +
Preference number: 5 (lower is better)
Translates to: PPALLSSGHVTWKPK*SRVTGHTSCFSFKA
Trigger: CGCCTTGAATGAGAAGCAGCTGGTGTGTCCCGTCACCCGGGACCACTTGGGCTTCCAGGTCACGTGGCCGGACGAAAGCAAGGCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp CAGAGCTTAGTCCTCGTGTGGAGGTGGGTGCCGGCCACAGGGTCTCCCACACGCAGACCAGAGAGCGCGTaGTTGCTCAGCTTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QSLVLVWRWVPATGSPTRRPESA*LLSFRV
Trigger: GACCCTGAAGCTGAGCAACAACGCGCTCTCTGGTCT...GCGTGTGGGAGACCCTGTGGCCGGCACCCACCTCCACACGAGGACTAAGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTCAGCTGCCCCCTGCCTaGCTTTCGTCCGGCCACGTG +
Preference number: 5 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLQLPPA*LSSGHV
Trigger: CACGTGGCCGGACGAAAGCAAGGCAGGGGGCAGCTG...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 90 bp TCCAGTGGGACGGTGGCAAGCTCCTCATCTGAGCAGAACACCTCCTaGACGAAGCAGTCACAACCCATGGGACAGGGCTGGGCAGGCCTG +
Preference number: 5 (lower is better)
Translates to: SSGTVASSSSEQNTS*TKQSQPMGQGWAGL
Trigger: CAGGCCTGCCCAGCCCTGTCCCATGGGTTGTGACTGCTTCGTCCAGGAGGTGTTCTGCTCAGATGAGGAGCTTGCCACCGTCCCACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 90 bp GACAGGTGGGCAAAGGTGCCCTCAGCGACAGTCTCCAGCTGGTTATaGGTCAGAGACAGGCCAACCAGGCACGGGGTGTGGGCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: DRWAKVPSATVSSWL*VRDRPTRHGVWAKR
Trigger: CCTCTTTGCCCACACCCCGTGCCTGGTTGGCCTGTCTCTGACCCATAACCAGCTGGAGACTGTCGCTGAGGGCACCTTTGCCCACCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 90 bp AGGTTGGACAGGTGGGCAAAGGTGCCCTCAGCGACAGTCTCCAGCTaGTTATGGGTCAGAGACAGGCCAACCAGGCACGGGGTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: RLDRWAKVPSATVSS*LWVRDRPTRHGVWA
Trigger: TGCCCACACCCCGTGCCTGGTTGGCCTGTCTCTGACCCATAACCAGCTGGAGACTGTCGCTGAGGGCACCTTTGCCCACCTGTCCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCAGGCTGCCCAGTTaGCCAAACACACCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GADQTPPPHLGDVTLSLACRLPS*PNTPWG
Trigger: CCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGCA...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS TCA 90 bp CCAGGTGGCAGTCGCACTGCCAGGGGTTACCGTGCAGGGCCAGGTTaGACAGGTTGTAGTTGGTGTCGAAGATGCCCTCCGGAAGTGTGG +
Preference number: 5 (lower is better)
Translates to: PGGSRTARGYRAGPG*TGCSWCRRCPPEVW
Trigger: CCACACTTCCGGAGGGCATCTTCGACACCAACTACAACCTGTTCAACCTGGCCCTGCACGGTAACCCCTGGCAGTGCGACTGCCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp GCAGCTCCGAGATGTTGTTGCTGTCCAGGAAGAGCTCCTGCAGGCTaGCCAGTTTGCCAAACACACCCTGGGGGAGACCAGAGAGCGCGT +
Preference number: 5 (lower is better)
Translates to: AAPRCCCCPGRAPAG*PVCQTHPGGDQRAR
Trigger: ACGCGCTCTCTGGTCTCCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGCAGGAGCTCTTCCTGGACAGCAACAACATCTCGGAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 90 bp TCCAGGAAGAGCTCCTGCAGGCTGCCCAGTTTGCCAAACACACCCTaGGGGAGACCAGAGAGCGCGTTGTTGCTCAGCTTCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: SRKSSCRLPSLPNTP*GRPESALLLSFRVC
Trigger: GCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTGGTCTCCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGCAGGAGCTCTTCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 90 bp AGCTGGTTCTTGGAGAGGCTGAGCAGCTCCAGCTTGGACAGGTTCTaGAAGAGGGCTGGGTGCAGCGCCGTAAGGTTGTTGCTGCCCAGG +
Preference number: 5 (lower is better)
Translates to: SWFLERLSSSSLDRF*KRAGCSAVRLLLPR
Trigger: CCTGGGCAGCAACAACCTTACGGCGCTGCACCCAGCCCTCTTCCAGAACCTGTCCAAGCTGGAGCTGCTCAGCCTCTCCAAGAACCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCCCAGAGAGCGCGTTGTaGCTCAGCTTCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTPESAL*LSFRVC
Trigger: GCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTGG...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCCCAGAGAGCGCGTTGTaGCTCAGCTTCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRPESAL*LSFRVC
Trigger: GCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTGG...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTTGCAGGCTGCCCAGTTaGCCAAACACACCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLCRLPS*PNTPWG
Trigger: CCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGCA...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAGTGGTCAGCTGGTTCTaGGAGAGGCTGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAVVSWF*ERLSSS
Trigger: GGAGCTGCTCAGCCTCTCCAAGAACCAGCTGACCAC...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS TCA 90 bp CGAAGATGCCCTCCGGAAGTGTGGTCAGCTGGTTCTTGGAGAGGCTaGGCAGCTCCAGCTTGGACAGGTTCTGGAAGAGGGCTGGGTGCA +
Preference number: 5 (lower is better)
Translates to: RRCPPEVWSAGSWRG*AAPAWTGSGRGLGA
Trigger: TGCACCCAGCCCTCTTCCAGAACCTGTCCAAGCTGGAGCTGCTCAGCCTCTCCAAGAACCAGCTGACCACACTTCCGGAGGGCATCTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCACCCAGCGAGGTCAGGTaGGAGAAGATGTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GADQTPPPHLGDVTLSLAPSEVR*EKMLVL
Trigger: CAGCACCAACATCTTCTCCAACCTGACCTCGCTGGG...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTAGGTGCGTGATGGCGTaGCGTTGCAGCCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFRCVMA*RCSHSL
Trigger: GAGGCTGTGGCTGCAACGCAACGCCATCACGCACCT...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCGGCATAAGGATGGCCTaGTTAGGCCGCACACTCCAG +
Preference number: 5 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTGIRMA*LGRTLQ
Trigger: CTGGAGTGTGCGGCCTAACAAGGCCATCCTTATGCC...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCGGCATAAGGATGGCCTaGTTAGGCCGCACACTCCAG +
Preference number: 5 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRGIRMA*LGRTLQ
Trigger: CTGGAGTGTGCGGCCTAACAAGGCCATCCTTATGCC...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGCCCAGCGAGGTCAGGTaGGAGAAGATGTTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMPSEVR*EKMLVL
Trigger: CAGCACCAACATCTTCTCCAACCTGACCTCGCTGGG...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp CCCTGTCCCTTGCATGTGAAAAGCCAAGGCTTCGGAGACTCAGCTCCCCTCCGCTCCAGCATGTTGAAGTaGAGGGTGAGCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PCPLHVKSQGFGDSAPLRSSMLK*RVSLPS
Trigger: GCTGGGCAAGCTCACCCTCAACTTCAACATGCTGGA...GCGGAGGGGAGCTGAGTCTCCGAAGCCTTGGCTTTTCACATGCAAGGGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp GGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAAGGTTCTGGGCCAGGTaGAGTGTCTTCAGATGGGTC +
Preference number: 5 (lower is better)
Translates to: GADQTPPPHLGDVTLSLARFWAR*SVFRWV
Trigger: GACCCATCTGAAGACACTCAACCTGGCCCAGAACCT...TGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS TCA 90 bp CGTATATGGCGGGATGTCCAGTGGGACGGTGGCAAGCTCCTCATCTaGGCAGAACACCTCCTGGACGAAGCAGTCACAACCCATGGGACA +
Preference number: 5 (lower is better)
Translates to: RIWRDVQWDGGKLLI*AEHLLDEAVTTHGT
Trigger: TGTCCCATGGGTTGTGACTGCTTCGTCCAGGAGGTGTTCTGCTCAGATGAGGAGCTTGCCACCGTCCCACTGGACATCCCGCCATATACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp AGATGTTGTTGCTGTCCAGGAAGAGCTCCTGCAGGCTGCCCAGTTTaGCAAACACACCCTGGGGGAGACCAGAGAGCGCGTTGTTGCTCA +
Preference number: 5 (lower is better)
Translates to: RCCCCPGRAPAGCPV*QTHPGGDQRARCCS
Trigger: TGAGCAACAACGCGCTCTCTGGTCTCCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGCAGGAGCTCTTCCTGGACAGCAACAACATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp AGAAGAGCTGGGAGAACACCTGAGGGGGCAGCTCCGAGATGTTGTTaGTGTCCAGGAAGAGCTCCTGCAGGCTGCCCAGTTTGCCAAACA +
Preference number: 5 (lower is better)
Translates to: RRAGRTPEGAAPRCC*CPGRAPAGCPVCQT
Trigger: TGTTTGGCAAACTGGGCAGCCTGCAGGAGCTCTTCCTGGACAGCAACAACATCTCGGAGCTGCCCCCTCAGGTGTTCTCCCAGCTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 90 bp GTGTGGGCAAAGAGGCCGGCAGGCAGGACCCGAAGCATGTTCCACTaGAAGCTCAGAAAGGTCAGATTACCCAGGGAGGCAAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: VWAKRPAGRTRSMFH*KLRKVRLPREAKME
Trigger: CTCCATCTTTGCCTCCCTGGGTAATCTGACCTTTCTGAGCTTGCAGTGGAACATGCTTCGGGTCCTGCCTGCCGGCCTCTTTGCCCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGAGCTCCGAGATGTTGTaGCTGTCCAGGAAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMSSEML*LSRKSS
Trigger: GGAGCTCTTCCTGGACAGCAACAACATCTCGGAGCT...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCAGTGGCCTCCACTTaGTATCACTGGGATGCAGTG +
Preference number: 5 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLAVAST*YHWDAV
Trigger: CACTGCATCCCAGTGATACAAAGTGGAGGCCACTGC...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGAAGTTGAGGGTGAGCTaGCCCAGCGAGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PGCGAAFEGALQGIRMALKLRVS*PSEVRL
Trigger: CAACCTGACCTCGCTGGGCAAGCTCACCCTCAACTT...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGAGAGCCTCCAGCATGTaGAAGTTGAGGGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SRPDSTPSPWGCNPVPCMRASSM*KLRVSL
Trigger: CAAGCTCACCCTCAACTTCAACATGCTGGAGGCTCT...CATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTAGCTCCGAGATGTTGTaGCTGTCCAGGAAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFSSEML*LSRKSS
Trigger: GGAGCTCTTCCTGGACAGCAACAACATCTCGGAGCT...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTAAGGTGCGTGATGGCGTaGCGTTGCAGCCACAGCCTC +
Preference number: 5 (lower is better)
Translates to: GCGAAFEGALQGIRMALLRCVMA*RCSHSL
Trigger: GAGGCTGTGGCTGCAACGCAACGCCATCACGCACCT...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTTTGAGGAAGACCACCTaGGTCAAGTTGGGGTTACTG +
Preference number: 5 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLLRKTT*VKLGLL
Trigger: CAGTAACCCCAACTTGACCAAGGTGGTCTTCCTCAA...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AAGAGGAGGAGGAGACCCTGGTTAGTGGAGCAGACCAGACTCCACCCCCTCACCAGGTGGGTAATGGCATaGTATGAGAGCATGAGGGAA +
Preference number: 5 (lower is better)
Translates to: KRRRRPWLVEQTRLHPLTRWVMA*YESMRE
Trigger: TTCCCTCATGCTCTCATACAATGCCATTACCCACCT...GGTGAGGGGGTGGAGTCTGGTCTGCTCCACTAACCAGGGTCTCCTCCTCCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTAGTGGTCAGCTGGTTCTaGGAGAGGCTGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: GCGAAFEGALQGIRMALLVVSWF*ERLSSS
Trigger: GGAGCTGCTCAGCCTCTCCAAGAACCAGCTGACCAC...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGCAGCTGCCCCCTGCCTaGCTTTCGTCCGGCCACGTG +
Preference number: 5 (lower is better)
Translates to: CPRWSRYSLVLYILGRNEQLPPA*LSSGHV
Trigger: CACGTGGCCGGACGAAAGCAAGGCAGGGGGCAGCTG...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp GGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGTTAAGACCAGAGAGCGCGTaGTTGCTCAGCTTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GCGAAFEGALQGIRMALLRPESA*LLSFRV
Trigger: GACCCTGAAGCTGAGCAACAACGCGCTCTCTGGTCT...TAACAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp AGTGGAGCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTAGGTGGGTAATGGCATaGTATGAGAGCATGAGGGAA +
Preference number: 5 (lower is better)
Translates to: SGADQTPPPHLGDVTLSLRWVMA*YESMRE
Trigger: TTCCCTCATGCTCTCATACAATGCCATTACCCACCT...AAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp CCAGGCTGTGGTGCAGCTTTTGAGGGTGCTTTGCAAGGCATAAGGATGGCCTTGGCTTTTGAGGGTGCTTaGCAAGGCATAAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: PGCGAAFEGALQGIRMALAFEGA*QGIRMA
Trigger: GGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGC...CAAGGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGCTGCACCACAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS-3UTR CAA 90 bp CTCAGGAGGGCCTGGGAACATGTGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTCTGGTTGACAATTGGTaGAGCTTAGCTGAAGACCTG +
Preference number: 5 (lower is better)
Translates to: LRRAWEHVPKVVEVQLGFLVDNW*SLAEDL
Trigger: CAGGTCTTCAGCTAAGCTCAACCAATTGTCAACCAG...AAAACCAAGCTGTACCTCGACCACCTTGGGCACATGTTCCCAGGCCCTCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp GCAGACCAGACTCCACCCCCTCACCTTGGGGATGTAACCCTGTCCCTTGCATGTTGGTCGAGGTACAGCTaGGTTTTATACATTTTAGGG +
Preference number: 5 (lower is better)
Translates to: ADQTPPPHLGDVTLSLACWSRYS*VLYILG
Trigger: CCCTAAAATGTATAAAACCAAGCTGTACCTCGACCA...ACATGCAAGGGACAGGGTTACATCCCCAAGGTGAGGGGGTGGAGTCTGGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp GGAAGCTCTCAGCAGACTTCAGAGAGAGAGAGAGCAGGTTGTAAACTGTTTCTTTCCAGCATGTTGAAGTaGAGGGTGAGCTTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSSQQTSERERAGCKLFLSSMLK*RVSLPS
Trigger: GCTGGGCAAGCTCACCCTCAACTTCAACATGCTGGA...AAGAAACAGTTTACAACCTGCTCTCTCTCTCTCTGAAGTCTGCTGAGAGCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp TGCCCAAGGTGGTCGAGGTACAGCTTGGTTTTATACATTTTAGGGAGGAATGAGTTGAGGAAGACCACCTaGGTCAAGTTGGGGTTACTG +
Preference number: 5 (lower is better)
Translates to: CPRWSRYSLVLYILGRNELRKTT*VKLGLL
Trigger: CAGTAACCCCAACTTGACCAAGGTGGTCTTCCTCAA...CTCATTCCTCCCTAAAATGTATAAAACCAAGCTGTACCTCGACCACCTTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp ATGGAAAGGAATGTTCAGGTTAAGATAAAGGATCGTGGAGGCCAAGTTTTATTGAGGTTCTGGGCCAGGTaGAGTGTCTTCAGATGGGTC +
Preference number: 5 (lower is better)
Translates to: MERNVQVKIKDRGGQVLLRFWAR*SVFRWV
Trigger: GACCCATCTGAAGACACTCAACCTGGCCCAGAACCT...CAATAAAACTTGGCCTCCACGATCCTTTATCTTAACCTGAACATTCCTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS-3UTR CAA 90 bp GGGCAAGTTCAAGGTAGGGCAAGGAAATATATTTGGGGGTTAAATATTTTTGCCGCTTTTGAGGGTGCTTaGCAAGGCATAAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: GQVQGRARKYIWGLNIFAAFEGA*QGIRMA
Trigger: GGCCATCCTTATGCCTTGCAAAGCACCCTCAAAAGC...GGCAAAAATATTTAACCCCCAAATATATTTCCTTGCCCTACCTTGAACTTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS GCA 72 bp GCCCTCGGGGTTGCTGTAGGTGCACTGGCTCCGGGCTaGCCTTTCCTGCACAGCCAGATCCCAGCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: ALGVAVGALAPG*PFLHSQIPAAP
Trigger: GGGGGCAGCTGGGATCTGGCTGTGCAGGAAAGGGCAGCCCGGAGCCAGTGCACCTACAGCAACCCCGAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 72 bp AGCGACACTGGGCCTGGTCACAGGCGAGCACCACGGTaGCCTCGGGGTTGCTGTAGGTGCACTGGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: SDTGPGHRRAPR*PRGCCRCTGSG
Trigger: CCCGGAGCCAGTGCACCTACAGCAACCCCGAGGGCACCGTGGTGCTCGCCTGTGACCAGGCCCAGTGTCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 72 bp GGGAGCATCGTGAGGGCCGAGCGGGTGGCGCCGGGCTaGCCTGTCTTCCTCAGGAGCAGAGAGGAGTCTGGT +
Preference number: 6 (lower is better)
Translates to: GSIVRAERVAPG*PVFLRSREESG
Trigger: ACCAGACTCCTCTCTGCTCCTGAGGAAGACAGGGCAGCCCGGCGCCACCCGCTCGGCCCTCACGATGCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429275.1
CDS GCA 72 bp AGGCGAGCACCACGGTGCCCTCGGGGTTGCTGTAGGTaGACTGGCTCCGGGCTGCCCTTTCCTGCACAGCCA +
Preference number: 6 (lower is better)
Translates to: RRAPRCPRGCCR*TGSGLPFPAQP
Trigger: TGGCTGTGCAGGAAAGGGCAGCCCGGAGCCAGTGCACCTACAGCAACCCCGAGGGCACCGTGGTGCTCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 72 bp CCTGGTCACAGGCGAGCACCACGGTGCCCTCGGGGTTaGTGTAGGTGCACTGGCTCCGGGCTGCCCTTTCCT +
Preference number: 6 (lower is better)
Translates to: PGHRRAPRCPRG*CRCTGSGLPFP
Trigger: AGGAAAGGGCAGCCCGGAGCCAGTGCACCTACAGCAACCCCGAGGGCACCGTGGTGCTCGCCTGTGACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp CTGCCCCCTGCCTTGCTTTCGTCCGGCCACGTGACCTaGAAGCCCAAGTGGTCCCGGGTGACGGGACACACC +
Preference number: 6 (lower is better)
Translates to: LPPALLSSGHVT*KPKWSRVTGHT
Trigger: GGTGTGTCCCGTCACCCGGGACCACTTGGGCTTCCAGGTCACGTGGCCGGACGAAAGCAAGGCAGGGGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp GGAGAGAGCTGGACGTTCAGCCAGCGACACTGGGCCTaGTCACAGGCGAGCACCACGGTGCCCTCGGGGTTG +
Preference number: 6 (lower is better)
Translates to: GESWTFSQRHWA*SQASTTVPSGL
Trigger: CAACCCCGAGGGCACCGTGGTGCTCGCCTGTGACCAGGCCCAGTGTCGCTGGCTGAACGTCCAGCTCTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 72 bp AGCATCTTCGTGAGGGCCGAGCGGGTGGCGCCGGGCTaGCCTGTCTTCCTCAGGAGCAGAGAGGAGTCTGGT +
Preference number: 6 (lower is better)
Translates to: SIFVRAERVAPG*PVFLRSREESG
Trigger: ACCAGACTCCTCTCTGCTCCTGAGGAAGACAGGGCAGCCCGGCGCCACCCGCTCGGCCCTCACGAAGATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000323830.4
CDS GCA 72 bp CCCCAGCTCCTGTATGCGCTGCTACTAGGGCCCTGCTaGCCGAGCCTCGATAGACACGGTGAGCCGCAGAGA +
Preference number: 6 (lower is better)
Translates to: PQLLYALLLGPC*PSLDRHGEPQR
Trigger: TCTCTGCGGCTCACCGTGTCTATCGAGGCTCGGGCAGCAGGGCCCTAGTAGCAGCGCATACAGGAGCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS TCA 72 bp CGCAGAGAACCGCAGCTCGACCTCAGGTCCCACTCCTaGCTAGCATTGTACTGCAGTCCCAGGGAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: RREPQLDLRSHS*LALYCSPREPC
Trigger: GCAGGGCTCCCTGGGACTGCAGTACAATGCTAGTCAGGAGTGGGACCTGAGGTCGAGCTGCGGTTCTCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 72 bp AGACCAGAGAGCGCGTTGTTGCTCAGCTTCAGGGTCTaGAGGCTGGTGAGTGGGTGGAACAGCTCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: RPESALLLSFRV*RLVSGWNSSSG
Trigger: CCCGGAGGAGCTGTTCCACCCACTCACCAGCCTGCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTGGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 72 bp AAGCCCAAGTGGTCCCGGGTGACGGGACACACCAGCTaGTTCTCATTCAAGGCGGGCACCACCTGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: KPKWSRVTGHTS*FSFKAGTTWPL
Trigger: CAAAGGCCAGGTGGTGCCCGCCTTGAATGAGAAGCAGCTGGTGTGTCCCGTCACCCGGGACCACTTGGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp GCAAAGGTGCCCTCAGCGACAGTCTCCAGCTGGTTATaGGTCAGAGACAGGCCAACCAGGCACGGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: AKVPSATVSSWL*VRDRPTRHGVW
Trigger: CCACACCCCGTGCCTGGTTGGCCTGTCTCTGACCCATAACCAGCTGGAGACTGTCGCTGAGGGCACCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp AGGTGGGCAAAGGTGCCCTCAGCGACAGTCTCCAGCTaGTTATGGGTCAGAGACAGGCCAACCAGGCACGGG +
Preference number: 6 (lower is better)
Translates to: RWAKVPSATVSS*LWVRDRPTRHG
Trigger: CCCGTGCCTGGTTGGCCTGTCTCTGACCCATAACCAGCTGGAGACTGTCGCTGAGGGCACCTTTGCCCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp TTGCTTTCGTCCGGCCACGTGACCTGGAAGCCCAAGTaGTCCCGGGTGACGGGACACACCAGCTGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: LLSSGHVTWKPK*SRVTGHTSCFS
Trigger: TGAGAAGCAGCTGGTGTGTCCCGTCACCCGGGACCACTTGGGCTTCCAGGTCACGTGGCCGGACGAAAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 90 bp CTGCCCAGTTTGCCAAACACACCCTGGGGGAGACCAGAGAGCGCGTaGTTGCTCAGCTTCAGGGTCTGCAGGCTGGTGAGTGGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: LPSLPNTPWGRPESA*LLSFRVCRLVSGWN
Trigger: GTTCCACCCACTCACCAGCCTGCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTGGTCTCCCCCAGGGTGTGTTTGGCAAACTGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 72 bp GGGAGAACACCTGAGGGGGCAGCTCCGAGATGTTGTTaGTGTCCAGGAAGAGCTCCTGCAGGCTGCCCAGTT +
Preference number: 6 (lower is better)
Translates to: GRTPEGAAPRCC*CPGRAPAGCPV
Trigger: AACTGGGCAGCCTGCAGGAGCTCTTCCTGGACAGCAACAACATCTCGGAGCTGCCCCCTCAGGTGTTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp AGCTCCTGCAGGCTGCCCAGTTTGCCAAACACACCCTaGGGGAGACCAGAGAGCGCGTTGTTGCTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SSCRLPSLPNTP*GRPESALLLSF
Trigger: GAAGCTGAGCAACAACGCGCTCTCTGGTCTCCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGCAGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 72 bp GAGGCAAAGATGGAGAGCGGCAGGTGCGTGATGGCGTaGCGTTGCAGCCACAGCCTCTCTAGGCAGAAGAGC +
Preference number: 6 (lower is better)
Translates to: EAKMESGRCVMA*RCSHSLSRQKS
Trigger: GCTCTTCTGCCTAGAGAGGCTGTGGCTGCAACGCAACGCCATCACGCACCTGCCGCTCTCCATCTTTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 90 bp GCAGCCAGGTGCTGGAAAAGACCCTCGGGCAGAGCCTCCAGCATGTaGAAGTTGAGGGTGAGCTTGCCCAGCGAGGTCAGGTTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: AARCWKRPSGRASSM*KLRVSLPSEVRLEK
Trigger: CTTCTCCAACCTGACCTCGCTGGGCAAGCTCACCCTCAACTTCAACATGCTGGAGGCTCTGCCCGAGGGTCTTTTCCAGCACCTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 90 bp GGAAGTGTGGTCAGCTGGTTCTTGGAGAGGCTGAGCAGCTCCAGCTaGGACAGGTTCTGGAAGAGGGCTGGGTGCAGCGCCGTAAGGTTG +
Preference number: 6 (lower is better)
Translates to: GSVVSWFLERLSSSS*DRFWKRAGCSAVRL
Trigger: CAACCTTACGGCGCTGCACCCAGCCCTCTTCCAGAACCTGTCCAAGCTGGAGCTGCTCAGCCTCTCCAAGAACCAGCTGACCACACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS TCA 72 bp AGTCGCACTGCCAGGGGTTACCGTGCAGGGCCAGGTTaGACAGGTTGTAGTTGGTGTCGAAGATGCCCTCCG +
Preference number: 6 (lower is better)
Translates to: SRTARGYRAGPG*TGCSWCRRCPP
Trigger: CGGAGGGCATCTTCGACACCAACTACAACCTGTTCAACCTGGCCCTGCACGGTAACCCCTGGCAGTGCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp ACGGTGGCAAGCTCCTCATCTGAGCAGAACACCTCCTaGACGAAGCAGTCACAACCCATGGGACAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: TVASSSSEQNTS*TKQSQPMGQGW
Trigger: CCAGCCCTGTCCCATGGGTTGTGACTGCTTCGTCCAGGAGGTGTTCTGCTCAGATGAGGAGCTTGCCACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 72 bp TGCTGGAAAAGACCCTCGGGCAGAGCCTCCAGCATGTaGAAGTTGAGGGTGAGCTTGCCCAGCGAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: CWKRPSGRASSM*KLRVSLPSEVR
Trigger: CCTGACCTCGCTGGGCAAGCTCACCCTCAACTTCAACATGCTGGAGGCTCTGCCCGAGGGTCTTTTCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 72 bp TTGCCAAACACACCCTGGGGGAGACCAGAGAGCGCGTaGTTGCTCAGCTTCAGGGTCTGCAGGCTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: LPNTPWGRPESA*LLSFRVCRLVS
Trigger: ACTCACCAGCCTGCAGACCCTGAAGCTGAGCAACAACGCGCTCTCTGGTCTCCCCCAGGGTGTGTTTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 90 bp GAGATGTTGTTGCTGTCCAGGAAGAGCTCCTGCAGGCTGCCCAGTTaGCCAAACACACCCTGGGGGAGACCAGAGAGCGCGTTGTTGCTC +
Preference number: 6 (lower is better)
Translates to: EMLLLSRKSSCRLPS*PNTPWGRPESALLL
Trigger: GAGCAACAACGCGCTCTCTGGTCTCCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGCAGGAGCTCTTCCTGGACAGCAACAACATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 90 bp GGGAGGTGGGTAATGGCATTGTATGAGAGCATGAGGGAACGCAGGTaGGACAGGTGGGCAAAGGTGCCCTCAGCGACAGTCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: GRWVMALYESMRERR*DRWAKVPSATVSSW
Trigger: CCAGCTGGAGACTGTCGCTGAGGGCACCTTTGCCCACCTGTCCAACCTGCGTTCCCTCATGCTCTCATACAATGCCATTACCCACCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 90 bp AGACCCTCGGGCAGAGCCTCCAGCATGTTGAAGTTGAGGGTGAGCTaGCCCAGCGAGGTCAGGTTGGAGAAGATGTTGGTGCTGAGGTTC +
Preference number: 6 (lower is better)
Translates to: RPSGRASSMLKLRVS*PSEVRLEKMLVLRF
Trigger: GAACCTCAGCACCAACATCTTCTCCAACCTGACCTCGCTGGGCAAGCTCACCCTCAACTTCAACATGCTGGAGGCTCTGCCCGAGGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS GCA 72 bp AGATGTTGTTGCTGTCCAGGAAGAGCTCCTGCAGGCTaGCCAGTTTGCCAAACACACCCTGGGGGAGACCAG +
Preference number: 6 (lower is better)
Translates to: RCCCCPGRAPAG*PVCQTHPGGDQ
Trigger: CTGGTCTCCCCCAGGGTGTGTTTGGCAAACTGGGCAGCCTGCAGGAGCTCTTCCTGGACAGCAACAACATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp TTGTATGAGAGCATGAGGGAACGCAGGTTGGACAGGTaGGCAAAGGTGCCCTCAGCGACAGTCTCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LYESMRERRLDR*AKVPSATVSSW
Trigger: CCAGCTGGAGACTGTCGCTGAGGGCACCTTTGCCCACCTGTCCAACCTGCGTTCCCTCATGCTCTCATACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 72 bp AAAAGACCCTCGGGCAGAGCCTCCAGCATGTTGAAGTaGAGGGTGAGCTTGCCCAGCGAGGTCAGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: KRPSGRASSMLK*RVSLPSEVRLE
Trigger: CTCCAACCTGACCTCGCTGGGCAAGCTCACCCTCAACTTCAACATGCTGGAGGCTCTGCCCGAGGGTCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 90 bp AGGTGCTGGAAAAGACCCTCGGGCAGAGCCTCCAGCATGTTGAAGTaGAGGGTGAGCTTGCCCAGCGAGGTCAGGTTGGAGAAGATGTTG +
Preference number: 6 (lower is better)
Translates to: RCWKRPSGRASSMLK*RVSLPSEVRLEKML
Trigger: CAACATCTTCTCCAACCTGACCTCGCTGGGCAAGCTCACCCTCAACTTCAACATGCTGGAGGCTCTGCCCGAGGGTCTTTTCCAGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 72 bp GGCAGAGCCTCCAGCATGTTGAAGTTGAGGGTGAGCTaGCCCAGCGAGGTCAGGTTGGAGAAGATGTTGGTG +
Preference number: 6 (lower is better)
Translates to: GRASSMLKLRVS*PSEVRLEKMLV
Trigger: CACCAACATCTTCTCCAACCTGACCTCGCTGGGCAAGCTCACCCTCAACTTCAACATGCTGGAGGCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 72 bp GTAATGGCATTGTATGAGAGCATGAGGGAACGCAGGTaGGACAGGTGGGCAAAGGTGCCCTCAGCGACAGTC +
Preference number: 6 (lower is better)
Translates to: VMALYESMRERR*DRWAKVPSATV
Trigger: GACTGTCGCTGAGGGCACCTTTGCCCACCTGTCCAACCTGCGTTCCCTCATGCTCTCATACAATGCCATTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp TGTTTTTCGTATATGGCGGGATGTCCAGTGGGACGGTaGCAAGCTCCTCATCTGAGCAGAACACCTCCTGGA +
Preference number: 6 (lower is better)
Translates to: CFSYMAGCPVGR*QAPHLSRTPPG
Trigger: TCCAGGAGGTGTTCTGCTCAGATGAGGAGCTTGCCACCGTCCCACTGGACATCCCGCCATATACGAAAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp AACTCCTCCAGGTCTCTGAAGATGCCAGCTGGGAGGTaGGTAATGGCATTGTATGAGAGCATGAGGGAACGC +
Preference number: 6 (lower is better)
Translates to: NSSRSLKMPAGR*VMALYESMRER
Trigger: GCGTTCCCTCATGCTCTCATACAATGCCATTACCCACCTCCCAGCTGGCATCTTCAGAGACCTGGAGGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CCA 72 bp GAACGAGGTCTCCACAAAGATGATGTTTTTCGTATATaGCGGGATGTCCAGTGGGACGGTGGCAAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: ERGLHKDDVFRI*RDVQWDGGKLL
Trigger: GAGGAGCTTGCCACCGTCCCACTGGACATCCCGCCATATACGAAAAACATCATCTTTGTGGAGACCTCGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1
CDS CAA 72 bp TTGAAGTTGAGGGTGAGCTTGCCCAGCGAGGTCAGGTaGGAGAAGATGTTGGTGCTGAGGTTCAAGAAGCTA +
Preference number: 6 (lower is better)
Translates to: LKLRVSLPSEVR*EKMLVLRFKKL
Trigger: TAGCTTCTTGAACCTCAGCACCAACATCTTCTCCAACCTGACCTCGCTGGGCAAGCTCACCCTCAACTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323830.4
ENST00000429275.1