RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPLX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000145920

Ensembl transcript IDs: ENST00000359546.8, ENST00000393745.8, ENST00000502265.5, ENST00000506642.5, ENST00000509837.5, ENST00000512824.5, ENST00000514150.5, ENST00000515025.5, ENST00000515094.1, ENST00000515502.1

Found 729 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATAGGCCCTGGCGGGGGCCCAGCATGGCTTCCTGGGGCGCTGCCTaGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGCCCC +
Preference number: 1 (lower is better)
Translates to: DRPWRGPSMASWGAA*VHCSGILRTSGRSP
Trigger: GGGGCTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAGGAAGCCATGCTGGGCCCCCGCCAGGGCCTATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp CCCTGCTTTTGGGATAGGCCCTGGCGGGGGCCCAGCATGGCTTCCTaGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCA +
Preference number: 1 (lower is better)
Translates to: PCFWDRPWRGPSMAS*GAAWVHCSGILRTS
Trigger: TGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAGGAAGCCATGCTGGGCCCCCGCCAGGGCCTATCCCAAAAGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp CCCTGTGCGGTCAGGGGCCTGTGGAACCCTAGAGGATGGAGCAGGTaGACAGCAGGGGTGGGCAACCCTGCCAGCTGGGTACTAGGGCTA +
Preference number: 1 (lower is better)
Translates to: PCAVRGLWNPRGWSR*TAGVGNPASWVLGL
Trigger: TAGCCCTAGTACCCAGCTGGCAGGGTTGCCCACCCCTGCTGTCCACCTGCTCCATCCTCTAGGGTTCCACAGGCCCCTGACCGCACAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp GAGGGACTGCACTGTGGAGAACACCAGGGCAGCCCTCTGAAGGTCTaGGGTCCCTCCGGCCCACCTGGGGTATCTGGTTCGACTGGGTTC +
Preference number: 1 (lower is better)
Translates to: EGLHCGEHQGSPLKV*GPSGPPGVSGSTGF
Trigger: GAACCCAGTCGAACCAGATACCCCAGGTGGGCCGGAGGGACCCCAGACCTTCAGAGGGCTGCCCTGGTGTTCTCCACAGTGCAGTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp GGAATACAGAGGGACTGCACTGTGGAGAACACCAGGGCAGCCCTCTaGAGGTCTGGGGTCCCTCCGGCCCACCTGGGGTATCTGGTTCGA +
Preference number: 1 (lower is better)
Translates to: GIQRDCTVENTRAAL*RSGVPPAHLGYLVR
Trigger: TCGAACCAGATACCCCAGGTGGGCCGGAGGGACCCCAGACCTTCAGAGGGCTGCCCTGGTGTTCTCCACAGTGCAGTCCCTCTGTATTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp CTGAAAGCCCCGATCCCACTCTGGGAATACAGAGGGACTGCACTGTaGAGAACACCAGGGCAGCCCTCTGAAGGTCTGGGGTCCCTCCGG +
Preference number: 1 (lower is better)
Translates to: LKAPIPLWEYRGTAL*RTPGQPSEGLGSLR
Trigger: CCGGAGGGACCCCAGACCTTCAGAGGGCTGCCCTGGTGTTCTCCACAGTGCAGTCCCTCTGTATTCCCAGAGTGGGATCGGGGCTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp GCCAAAGGTCAGCATGCTGGGCAGGGCTGGAATGTGTCATTACTTTaGCTGGCTGGGGACAGTGGTCCTCCTGGCAGTGGGGAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: AKGQHAGQGWNVSLL*LAGDSGPPGSGEQG
Trigger: TCCCTGCTCCCCACTGCCAGGAGGACCACTGTCCCCAGCCAGCCAAAGTAATGACACATTCCAGCCCTGCCCAGCATGCTGACCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp ATGGACGCCTTCTGTCAAGTGGGAATTGGCTTCTCACCAAAGGCTTaGGGCTTTGGCCAGGAAGCGTCCTCCTGGGGACCGTGGGGCCCT +
Preference number: 1 (lower is better)
Translates to: MDAFCQVGIGFSPKA*GFGQEASSWGPWGP
Trigger: AGGGCCCCACGGTCCCCAGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp GGTCCCTCCGGCCCACCTGGGGTATCTGGTTCGACTGGGTTCTCTTaGTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTG +
Preference number: 1 (lower is better)
Translates to: GPSGPPGVSGSTGFS*SSEAPCALVSATYL
Trigger: CAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAACCCAGTCGAACCAGATACCCCAGGTGGGCCGGAGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp TGGAGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTaGCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTG +
Preference number: 1 (lower is better)
Translates to: WRGGRPCLEILTCHW*PAQGDPQPPFCFSL
Trigger: CAGAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp GACTCTAGGCCAAGGACAAGGTCTCCCGTTGGAGGTGGCCAACTGTaGCCAGTGGTCTCAGGGCTGGGAAGGGACATCTTACCCACGTTC +
Preference number: 1 (lower is better)
Translates to: DSRPRTRSPVGGGQL*PVVSGLGRDILPTF
Trigger: GAACGTGGGTAAGATGTCCCTTCCCAGCCCTGAGACCACTGGTCACAGTTGGCCACCTCCAACGGGAGACCTTGTCCTTGGCCTAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp CGGCCCACCTGGGGTATCTGGTTCGACTGGGTTCTCTTGCTCATCTaGAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTACTCTC +
Preference number: 1 (lower is better)
Translates to: RPTWGIWFDWVLLLI*STLRLGLCYLSGTL
Trigger: GAGAGTACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAACCCAGTCGAACCAGATACCCCAGGTGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp TCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTaGGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCA +
Preference number: 1 (lower is better)
Translates to: SHPVGHTHLTSQAIL*GFCPCQSNSHVFCA
Trigger: TGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCTCACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp CCTGCTGGGGAAAGACTGTCCTCCCTTTTTCAAGCTACTTGGGAGTaGGGTGCAGGTGGATACCCTGGGATGAAGGGAGGTGTGAGGGAG +
Preference number: 1 (lower is better)
Translates to: PAGERLSSLFQATWE*GAGGYPGMKGGVRE
Trigger: CTCCCTCACACCTCCCTTCATCCCAGGGTATCCACCTGCACCCCACTCCCAAGTAGCTTGAAAAAGGGAGGACAGTCTTTCCCCAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp ATTTGGAGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTaGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCT +
Preference number: 1 (lower is better)
Translates to: IWRGGRPCLEILTCH*CPAQGDPQPPFCFS
Trigger: AGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCTCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp ATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTaGTCCACACAGACAGGCTCTCTGGGCCACACATTAGCTGCTCTC +
Preference number: 1 (lower is better)
Translates to: ILPLPEQLSRILCTT*STQTGSLGHTLAAL
Trigger: GAGAGCAGCTAATGTGTGGCCCAGAGAGCCTGTCTGTGTGGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp CCTGTGAGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTaGACTACGTGCTCCACACAGACAGGCTCTCTGGGCCACACATTA +
Preference number: 1 (lower is better)
Translates to: PVRILPLPEQLSRIL*TTCSTQTGSLGHTL
Trigger: TAATGTGTGGCCCAGAGAGCCTGTCTGTGTGGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCTCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp AAGTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTaGCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGA +
Preference number: 1 (lower is better)
Translates to: KCVACTLPHLYVHTH*PPIQWVTHTSPPRR
Trigger: TCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp CTGAATTCTGGGGCCACTCCTCCCCTAAGTGTGTTGCATGCACACTaGCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGG +
Preference number: 1 (lower is better)
Translates to: LNSGATPPLSVLHAH*PICMCTLIALPSSG
Trigger: CCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACACTTAGGGGAGGAGTGGCCCCAGAATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp TCTGTGTCCTTGCATCACTGTCGAGGTTTGAAGGTCCCTGTCAAGTaGCAGAGGGGGACCTCTCTGAACACTTGTGTCCAAGTGGGGCTC +
Preference number: 1 (lower is better)
Translates to: SVSLHHCRGLKVPVK*QRGTSLNTCVQVGL
Trigger: GAGCCCCACTTGGACACAAGTGTTCAGAGAGGTCCCCCTCTGCCACTTGACAGGGACCTTCAAACCTCGACAGTGATGCAAGGACACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp ACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTaGGTCACACACACCTCACCTCCCAGGCGATCCTGTGAGGATTCT +
Preference number: 1 (lower is better)
Translates to: TLPHLYVHTHCPPIQ*VTHTSPPRRSCEDS
Trigger: AGAATCCTCACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp CTGGGCCTAAGAGTGATCACTTGGCAGTGGTTGGAGCCAGGTGTGTaGCAGGCAGAAATTTTCTCCTATATCCACCCCCAGGAAGACCTG +
Preference number: 1 (lower is better)
Translates to: LGLRVITWQWLEPGV*QAEIFSYIHPQEDL
Trigger: CAGGTCTTCCTGGGGGTGGATATAGGAGAAAATTTCTGCCTGGCACACACCTGGCTCCAACCACTGCCAAGTGATCACTCTTAGGCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp ACTCCTCCCCTAAGTGTGTTGCATGCACACTGCCCCATTTGTATGTaGACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCAC +
Preference number: 1 (lower is better)
Translates to: TPPLSVLHAHCPICM*TLIALPSSGSHTPH
Trigger: GTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACACTTAGGGGAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp TGGCTGCTTTGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTaGAATACTTCTGTATCCTCCCTGTTCTCTCTCTCTCTCTTACAC +
Preference number: 1 (lower is better)
Translates to: WLLCPPAVPLIGDLG*NTSVSSLFSLSLLH
Trigger: GTGTAAGAGAGAGAGAGAGAACAGGGAGGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCAAAGCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp CAGTCCCAGACGTCCCAGAGGAGAGTTTGTCCTTGGCCAATGAGATaGATGGATGGACGCCTTCTGTCAAGTGGGAATTGGCTTCTCACC +
Preference number: 1 (lower is better)
Translates to: QSQTSQRRVCPWPMR*MDGRLLSSGNWLLT
Trigger: GGTGAGAAGCCAATTCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGTCTGGGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp ACAGGCTCTCTGGGCCACACATTAGCTGCTCTCCACAGCCAGGTCTaGATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAAGAGTG +
Preference number: 1 (lower is better)
Translates to: TGSLGHTLAALHSQV*ISNDSHCVPLGLRV
Trigger: CACTCTTAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAGAGCAGCTAATGTGTGGCCCAGAGAGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp TGCACAGCTTTGCAGTTAAGGACACCTTCTGGGAGCTTCTGGATTTaGAGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGG +
Preference number: 1 (lower is better)
Translates to: CTALQLRTPSGSFWI*RGGRPCLEILTCHW
Trigger: CCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCCAGAAGGTGTCCTTAACTGCAAAGCTGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp GTACCCTGCACAGCTTTGCAGTTAAGGACACCTTCTGGGAGCTTCTaGATTTGGAGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGT +
Preference number: 1 (lower is better)
Translates to: VPCTALQLRTPSGSF*IWRGGRPCLEILTC
Trigger: ACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCCAGAAGGTGTCCTTAACTGCAAAGCTGTGCAGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp AATGCCAGTCCCAGACGTCCCAGAGGAGAGTTTGTCCTTGGCCAATaGGATGAATGGATGGACGCCTTCTGTCAAGTGGGAATTGGCTTC +
Preference number: 1 (lower is better)
Translates to: NASPRRPRGEFVLGQ*DEWMDAFCQVGIGF
Trigger: GAAGCCAATTCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGTCTGGGACTGGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp CTGGGATGGTGTCTCGACTTCCTGATTCCATCTGGAGGAGTACCCTaGACAGCTTTGCAGTTAAGGACACCTTCTGGGAGCTTCTGGATT +
Preference number: 1 (lower is better)
Translates to: LGWCLDFLIPSGGVP*TALQLRTPSGSFWI
Trigger: AATCCAGAAGCTCCCAGAAGGTGTCCTTAACTGCAAAGCTGTGCAGGGTACTCCTCCAGATGGAATCAGGAAGTCGAGACACCATCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp TTGTCCTTGGCCAATGAGATGAATGGATGGACGCCTTCTGTCAAGTaGGAATTGGCTTCTCACCAAAGGCTTGGGGCTTTGGCCAGGAAG +
Preference number: 1 (lower is better)
Translates to: LSLANEMNGWTPSVK*ELASHQRLGALARK
Trigger: CTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp CTCTTACACACACCTGGGATGGTGTCTCGACTTCCTGATTCCATCTaGAGGAGTACCCTGCACAGCTTTGCAGTTAAGGACACCTTCTGG +
Preference number: 1 (lower is better)
Translates to: LLHTPGMVSRLPDSI*RSTLHSFAVKDTFW
Trigger: CCAGAAGGTGTCCTTAACTGCAAAGCTGTGCAGGGTACTCCTCCAGATGGAATCAGGAAGTCGAGACACCATCCCAGGTGTGTGTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp CTGTATCCTCCCTGTTCTCTCTCTCTCTCTTACACACACCTGGGATaGTGTCTCGACTTCCTGATTCCATCTGGAGGAGTACCCTGCACA +
Preference number: 1 (lower is better)
Translates to: LYPPCSLSLSYTHLG*CLDFLIPSGGVPCT
Trigger: TGTGCAGGGTACTCCTCCAGATGGAATCAGGAAGTCGAGACACCATCCCAGGTGTGTGTAAGAGAGAGAGAGAGAACAGGGAGGATACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp CTCACCATCCCCACACAACTGACTGAGCAGAAAGCTTTGATAATTTaGGTGGGGGACAAATGCCAGTCCCAGACGTCCCAGAGGAGAGTT +
Preference number: 1 (lower is better)
Translates to: LTIPTQLTEQKALII*VGDKCQSQTSQRRV
Trigger: AACTCTCCTCTGGGACGTCTGGGACTGGCATTTGTCCCCCACTCAAATTATCAAAGCTTTCTGCTCAGTCAGTTGTGTGGGGATGGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 90 bp GACGTCCCAGAGGAGAGTTTGTCCTTGGCCAATGAGATGAATGGATaGACGCCTTCTGTCAAGTGGGAATTGGCTTCTCACCAAAGGCTT +
Preference number: 1 (lower is better)
Translates to: DVPEESLSLANEMNG*TPSVKWELASHQRL
Trigger: AAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp CAAGACACACACACGCTCCAGCCCTACACATATGCATATGATCTCTaGACACACAATCCCTGTTGCAGTCTCTGCCACGCATTATCATGC +
Preference number: 1 (lower is better)
Translates to: QDTHTLQPYTYAYDL*THNPCCSLCHALSC
Trigger: GCATGATAATGCGTGGCAGAGACTGCAACAGGGATTGTGTGTTCAGAGATCATATGCATATGTGTAGGGCTGGAGCGTGTGTGTGTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp ACAATCTCAAGACACACACACGCTCCAGCCCTACACATATGCATATaGTCTCTGAACACACAATCCCTGTTGCAGTCTCTGCCACGCATT +
Preference number: 1 (lower is better)
Translates to: TISRHTHAPALHICI*SLNTQSLLQSLPRI
Trigger: AATGCGTGGCAGAGACTGCAACAGGGATTGTGTGTTCAGAGATCATATGCATATGTGTAGGGCTGGAGCGTGTGTGTGTCTTGAGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp CTAACATATACAGCCTCTAAACACGAGATGGATAGCACACACATATaGCACAATTTCAACCCAAATACACCACCTCAATCAAGCACACAT +
Preference number: 1 (lower is better)
Translates to: LTYTASKHEMDSTHI*HNFNPNTPPQSSTH
Trigger: ATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTCATATGTGTGTGCTATCCATCTCGTGTTTAGAGGCTGTATATGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 90 bp ACATATGGATTGTTTTGTCTCGTGTTTAAAGTATTGCAGTCTAACTaGTATGGCTTTACCTATTGGAAACGGACAGAGAAGACACATGTC +
Preference number: 1 (lower is better)
Translates to: TYGLFCLVFKVLQSN*YGFTYWKRTEKTHV
Trigger: GACATGTGTCTTCTCTGTCCGTTTCCAATAGGTAAAGCCATATCAGTTAGACTGCAATACTTTAAACACGAGACAAAACAATCCATATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 90 bp TGGTTCCCTAAACATATGGATTGTTTTGTCTCGTGTTTAAAGTATTaGAGTCTAACTGATATGGCTTTACCTATTGGAAACGGACAGAGA +
Preference number: 1 (lower is better)
Translates to: WFPKHMDCFVSCLKY*SLTDMALPIGNGQR
Trigger: TCTCTGTCCGTTTCCAATAGGTAAAGCCATATCAGTTAGACTGCAATACTTTAAACACGAGACAAAACAATCCATATGTTTAGGGAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTGTGGGGCTCGCACACTaGGACTGGGGAGGCCTGGGG +
Preference number: 2 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPVGLAH*DWGGLG
Trigger: CCCCAGGCCTCCCCAGTCCCAGTGTGCGAGCCCCAC...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGGCCACTCAGTGCCCCTaGCCTGACCTGGGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRATQCP*PDLGAH
Trigger: GTGGGCCCCCAGGTCAGGGCAGGGGCACTGAGTGGC...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGGGCGGGGGCCCAGCATaGCTTCCTGGGGCGCTGCCT +
Preference number: 2 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRGGGPA*LPGALP
Trigger: AGGCAGCGCCCCAGGAAGCCATGCTGGGCCCCCGCC...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTGGCAGCCCCTTGACTaGGCAAGCTGGGCCCAGCCT +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLWQPLD*ASWAQP
Trigger: AGGCTGGGCCCAGCTTGCTCAGTCAAGGGGCTGCCA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCCCTGGACTGGGCCCTaGCTGTCTCTGGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRPWTGP*LSLAQD
Trigger: GTCCTGGGCCAGAGACAGGCAGGGCCCAGTCCAGGG...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTGGCCTGGCAGCCCCTTaGCTGAGCAAGCTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSGLAAP*LSKLGP
Trigger: TGGGCCCAGCTTGCTCAGTCAAGGGGCTGCCAGGCC...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTACCAGGGCAGCCCTCTaGAGGTCTGGGGTCCCTCCG +
Preference number: 2 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSTRAAL*RSGVPP
Trigger: CGGAGGGACCCCAGACCTTCAGAGGGCTGCCCTGGT...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGCATCAGGGTGGGGCTaGAAGCCCCGATCCCACTCT +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLASGWG*KPRSHS
Trigger: AGAGTGGGATCGGGGCTTTCAGCCCCACCCTGATGC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTGTGTTGTGTGCGTGCTaGATTCTGGGGCCACTCCTC +
Preference number: 2 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPVLCAC*ILGPLL
Trigger: GAGGAGTGGCCCCAGAATTCAGCACGCACACAACAC...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGGGCTTCCTGGGGCGCTaGCTGGGTCCATTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQGFLGR*LGPLQW
Trigger: CCACTGCAATGGACCCAGGCAGCGCCCCAGGAAGCC...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTGGGCCACACATTAGCTaGTCTCCACAGCCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPGPHIS*SPQPGL
Trigger: CAGACCTGGCTGTGGAGAGCAGCTAATGTGTGGCCC...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCAGGGCCTCTCAGCCTaGGCCTTCCCGGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRQGLSA*AFPGQA
Trigger: AGCCTGTCCCGGGAAGGCCCAGGCTGAGAGGCCCTG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCTGGGGCCCCTGGACTaGGCCCTGCCTGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSLGPLD*ALPVSG
Trigger: GCCAGAGACAGGCAGGGCCCAGTCCAGGGGCCCCAG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp GGCCAAAGGTCAGCATGCTGGGCAGGGCTGGAATGTGTCATTACTTaGGCTGGCTGGGGACAGTGGTCCTCCTGGCAGTGGGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GQRSACWAGLECVIT*AGWGQWSSWQWGAG
Trigger: CCCTGCTCCCCACTGCCAGGAGGACCACTGTCCCCAGCCAGCCAAAGTAATGACACATTCCAGCCCTGCCCAGCATGCTGACCTTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTTGCAGGTGGATACCCTaGGATGAAGGGAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPCRWIP*DEGRCE
Trigger: CTCACACCTCCCTTCATCCCAGGGTATCCACCTGCA...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTCCCCCTGACCCCTGCTaGGGAAAGACTGTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCPPDPC*GKTVLP
Trigger: AGGGAGGACAGTCTTTCCCCAGCAGGGGTCAGGGGG...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCCCCCCTGACCCCTGCTaGGGAAAGACTGTCCTCCCT +
Preference number: 2 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPPPDPC*GKTVLP
Trigger: AGGGAGGACAGTCTTTCCCCAGCAGGGGTCAGGGGG...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGGCCTCTCAGCCTaGGCCTTCCCGGGACAGGCT +
Preference number: 2 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTQGLSA*AFPGQA
Trigger: AGCCTGTCCCGGGAAGGCCCAGGCTGAGAGGCCCTG...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTTTCTCACCAAAGGCTTaGGGCTTTGGCCAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPFSPKA*GFGQEA
Trigger: CGCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAA...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTCCTGGGGCGCTGCCTaGGTCCATTGCAGTGGGATT +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLSWGAA*VHCSGI
Trigger: AATCCCACTGCAATGGACCCAGGCAGCGCCCCAGGA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTTCCCTCCGGCCCACCTaGGGTATCTGGTTCGACTGG +
Preference number: 2 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCSLRPT*GIWFDW
Trigger: CCAGTCGAACCAGATACCCCAGGTGGGCCGGAGGGA...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGCCACTCAGTGCCCCTaGCCTGACCTGGGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTATQCP*PDLGAH
Trigger: GTGGGCCCCCAGGTCAGGGCAGGGGCACTGAGTGGC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCGGCTTCCTGGGGCGCTaGCTGGGTCCATTGCAGTGG +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSGFLGR*LGPLQW
Trigger: CCACTGCAATGGACCCAGGCAGCGCCCCAGGAAGCC...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCTCCTCCTGGGGACCGTaGGGCCCTGGAAGCGCATGG +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSSSWGP*GPGSAW
Trigger: CCATGCGCTTCCAGGGCCCCACGGTCCCCAGGAGGA...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGGCCAACTGTGACCAGTaGTCTCAGGGCTGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRANCDQ*SQGWEG
Trigger: CCCTTCCCAGCCCTGAGACCACTGGTCACAGTTGGC...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGCAAACTGGGGCCAATaGGAACAAGGGCTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLANWGQ*EQGLQG
Trigger: CCCCTGAAGCCCTTGTTCCCATTGGCCCCAGTTTGC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACTCGCACACTGGGACTaGGGAGGCCTGGGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTLAHWD*GGLGPL
Trigger: CAGGGGCCCCAGGCCTCCCCAGTCCCAGTGTGCGAG...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGCCCCGATCCCACTCTaGGAATACAGAGGGACTGCA +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLAPIPL*EYRGTA
Trigger: TGCAGTCCCTCTGTATTCCCAGAGTGGGATCGGGGC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCTCCTGGGCCCTTCCCTaGGAGCACACACGCTCACCT +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSSWALP*EHTRSP
Trigger: AGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGGA...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTATTCTGTGCACTACGTaGTCCACACAGACAGGCTCT +
Preference number: 2 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPILCTT*STQTGS
Trigger: AGAGCCTGTCTGTGTGGAGCACGTAGTGCACAGAAT...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACAGGAAGCGTCCTCCTaGGGACCGTGGGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTQEASS*GPWGPG
Trigger: TCCAGGGCCCCACGGTCCCCAGGAGGACGCTTCCTG...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGGTAGGTCAAGGGAGCTaGAGCTGTCGAGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRVGQGS*SCRGPA
Trigger: AGCAGGGCCTCGACAGCTCCAGCTCCCTTGACCTAC...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGCCCTGCCTGTCTCTaGCCCAGGACCCCAGGGTTT +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGPACL*PRTPGF
Trigger: AAACCCTGGGGTCCTGGGCCAGAGACAGGCAGGGCC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCAGCCCTCTGAAGGTCTaGGGTCCCTCCGGCCCACCT +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSSPLKV*GPSGPP
Trigger: AGGTGGGCCGGAGGGACCCCAGACCTTCAGAGGGCT...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGGAGGGGTCTGGGACATaGACCCAGACTAAACCAGCC +
Preference number: 2 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPREGSGT*TQTKPA
Trigger: GGCTGGTTTAGTCTGGGTCCATGTCCCAGACCCCTC...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGTCACTTGGCAGTGGTTaGAGCCAGGTGTGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQSLGSG*SQVCAR
Trigger: CCTGGCACACACCTGGCTCCAACCACTGCCAAGTGA...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp ACACCTTCTGGGAGCTTCTGGATTTGGAGGGGAGGACGTCCATGTTaGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGGGCGATCCA +
Preference number: 2 (lower is better)
Translates to: TPSGSFWIWRGGRPC*EILTCHWCPAQGDP
Trigger: TGGATCGCCCTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCCAGAAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGGTTCTCTTGCTCATCTaGAGCACCCTGCGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQVLLLI*STLRLG
Trigger: ACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAAC...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGGTTCTCTTGCTCATCTaGAGCACCCTGCGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRVLLLI*STLRLG
Trigger: ACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAAC...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGCATCAGGGTGGGGCTaGAAGCCCCGATCCCACTCT +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSASGWG*KPRSHS
Trigger: AGAGTGGGATCGGGGCTTTCAGCCCCACCCTGATGC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCCTGGACTGGGCCCTaGCTGTCTCTGGCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHPWTGP*LSLAQD
Trigger: GTCCTGGGCCAGAGACAGGCAGGGCCCAGTCCAGGG...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTGTGTTGCATGCACACTaGCCCATTTGTATGTGCACA +
Preference number: 2 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPVLHAH*PICMCT
Trigger: TGTGCACATACAAATGGGGCAGTGTGCATGCAACAC...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCAGAAGTAGTAACAGGTaGAGTAGGCTGGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLRSSNR*SRLGQE
Trigger: CTCCTGCCCCAGCCTACTCCACCTGTTACTACTTCT...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTACAGGAAGCGTCCTCCTaGGGACCGTGGGGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: FSCSSEAPCALVSATYLVQEASS*GPWGPG
Trigger: TCCAGGGCCCCACGGTCCCCAGGAGGACGCTTCCTG...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGAAAGGCTTGGGGCTTTaGCCAGGAAGCGTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRKGLGL*PGSVLL
Trigger: CAGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTT...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTCAGTGGTCTCAGGGCTaGGAAGGGACATCTTACCCA +
Preference number: 2 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCQWSQG*EGTSYP
Trigger: TGGGTAAGATGTCCCTTCCCAGCCCTGAGACCACTG...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTGACAAGGTCTCCCGTTaGAGGTGGCCAACTGTGACC +
Preference number: 2 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSDKVSR*RWPTVT
Trigger: GGTCACAGTTGGCCACCTCCAACGGGAGACCTTGTC...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGCTGGGTCCATTGCAGTaGGATTCTGAGGACCTCAGG +
Preference number: 2 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQLGPLQ*DSEDLR
Trigger: CCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAG...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCTTTTGGGATAGGCCCTaGCGGGGGCCCAGCATGGCT +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSFWDRP*RGPSMA
Trigger: AGCCATGCTGGGCCCCCGCCAGGGCCTATCCCAAAA...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAGTAGGTCAAGGGAGCTaGAGCTGTCGAGGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTVGQGS*SCRGPA
Trigger: AGCAGGGCCTCGACAGCTCCAGCTCCCTTGACCTAC...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCCACAAAGGATCCATTTaGAGGGACCAGCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPHKGSI*RDQLGR
Trigger: CCTGCCAAGCTGGTCCCTTCAAATGGATCCTTTGTG...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCCCTGTTGCAGTCTCTaGCACGCATTATCATGCATG +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLPCCSL*HALSCM
Trigger: CATGCATGATAATGCGTGGCAGAGACTGCAACAGGG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTCTGCGCCTTGGTCTCTaGTACCTATCTGGTACTCTC +
Preference number: 2 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCLRLGL*YLSGTL
Trigger: GAGAGTACCAGATAGGTAGCAGAGACCAAGGCGCAG...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCTCTCACGTATTCTGTaGACTACGTGCTCCACACAG +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLLSRIL*TTCSTQ
Trigger: CTGTGTGGAGCACGTAGTGCACAGAATACGTGAGAG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTGCCCCATTTGTATGTaGACACTCATTGCCCTCCCA +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLCPICM*TLIALP
Trigger: TGGGAGGGCAATGAGTGTGCACATACAAATGGGGCA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCCACAGCCGCCTTTTTaGTTCTCTCTGGCAGCTCCT +
Preference number: 2 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSPQPPF*FSLAAP
Trigger: AGGAGCTGCCAGAGAGAAGCAAAAAGGCGGCTGTGG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCTGTCATTACTTTGGCTaGCTGGGGACAGTGGTCCTC +
Preference number: 2 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPCHYFG*LGTVVL
Trigger: GAGGACCACTGTCCCCAGCCAGCCAAAGTAATGACA...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCATGGACAGGACGGGGTaGGGAGAGGGGTGGATAGGA +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSMDRTG*GEGWIG
Trigger: TCCTATCCACCCCTCTCCCCACCCCGTCCTGTCCAT...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCAGTGGTCTCAGGGCTaGGAAGGGACATCTTACCCA +
Preference number: 2 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRQWSQG*EGTSYP
Trigger: TGGGTAAGATGTCCCTTCCCAGCCCTGAGACCACTG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAGACAAGGTCTCCCGTTaGAGGTGGCCAACTGTGACC +
Preference number: 2 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTDKVSR*RWPTVT
Trigger: GGTCACAGTTGGCCACCTCCAACGGGAGACCTTGTC...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGGCCCTGCCTGTCTCTaGCCCAGGACCCCAGGGTTT +
Preference number: 2 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLGPACL*PRTPGF
Trigger: AAACCCTGGGGTCCTGGGCCAGAGACAGGCAGGGCC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAAGCCCTCTGAAGGTCTaGGGTCCCTCCGGCCCACCT +
Preference number: 2 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLSPLKV*GPSGPP
Trigger: AGGTGGGCCGGAGGGACCCCAGACCTTCAGAGGGCT...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGAAGTCCTGCTGTCCTaGAGCAGAATAGAGGGGTCT +
Preference number: 2 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCEVLLS*SRIEGS
Trigger: AGACCCCTCTATTCTGCTCCAGGACAGCAGGACTTC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp CCTGGACTGGGCCCTGCCTGTCTCTGGCCCAGGACCCCAGGGTTTTaGAGAATGACCATCCTGCCCAGGATAACAGACACAAAGAGACAA +
Preference number: 2 (lower is better)
Translates to: PGLGPACLWPRTPGF*RMTILPRITDTKRQ
Trigger: TTGTCTCTTTGTGTCTGTTATCCTGGGCAGGATGGTCATTCTCAAAAACCCTGGGGTCCTGGGCCAGAGACAGGCAGGGCCCAGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGGGTTCCTCCACAAATaGGCTAAAGTCCACAAAGGA +
Preference number: 2 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLGFLHK*AKVHKG
Trigger: TCCTTTGTGGACTTTAGCTCATTTGTGGAGGAACCC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCAGAGGGGGACCTCTCTaGACACTTGTGTCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSRGGPL*TLVSKW
Trigger: CCACTTGGACACAAGTGTTCAGAGAGGTCCCCCTCT...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTACGCATTATCATGCATaGATGGATACAGTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPTHYHA*MDTVSS
Trigger: GGAGGAAACTGTATCCATGCATGCATGATAATGCGT...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCCCTGTTGCAGTCTCTaGCACGCATTATCATGCATG +
Preference number: 2 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRPCCSL*HALSCM
Trigger: CATGCATGATAATGCGTGGCAGAGACTGCAACAGGG...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCTCATCTGAAGCACCCTaGGCCTTGGTCTCTGCTACC +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSSSEAP*ALVSAT
Trigger: GGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGA...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGGCCACACATTAGCTaGTCTCCACAGCCAGGTCTG +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGPHIS*SPQPGL
Trigger: CAGACCTGGCTGTGGAGAGCAGCTAATGTGTGGCCC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCAAGCTACTTGGGAGTaGGGTGCAGGTGGATACCCT +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSQATWE*GAGGYP
Trigger: AGGGTATCCACCTGCACCCCACTCCCAAGTAGCTTG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAAAGGTCAGCATGCTaGGCAGGGCTGGAATGTGTC +
Preference number: 2 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTQRSAC*AGLECV
Trigger: GACACATTCCAGCCCTGCCCAGCATGCTGACCTTTG...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCTGGAGGTGTTCCCCATaGCATAGACCATCGCTACCC +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSWRCSP*HRPSLP
Trigger: GGGTAGCGATGGTCTATGCCATGGGGAACACCTCCA...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCATCCTCCTGGGGACCGTaGGGCCCTGGAAGCGCATGG +
Preference number: 2 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSSSWGP*GPGSAW
Trigger: CCATGCGCTTCCAGGGCCCCACGGTCCCCAGGAGGA...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGCAAACTGGGGCCAATaGGAACAAGGGCTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSANWGQ*EQGLQG
Trigger: CCCCTGAAGCCCTTGTTCCCATTGGCCCCAGTTTGC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCCCACCTGGGGTATCTaGTTCGACTGGGTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSPTWGI*FDWVLL
Trigger: CAAGAGAACCCAGTCGAACCAGATACCCCAGGTGGG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAAGAGGGACTGCACTGTaGAGAACACCAGGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTRGTAL*RTPGQP
Trigger: GGGCTGCCCTGGTGTTCTCCACAGTGCAGTCCCTCT...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCCTAAACCAGCCATCCTaGAGGGCAGGCATCAGGGTG +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSLNQPS*RAGIRV
Trigger: CACCCTGATGCCTGCCCTCCAGGATGGCTGGTTTAG...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCTAAGAGTGATCACTTaGCAGTGGTTGGAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRLRVIT*QWLEPG
Trigger: ACCTGGCTCCAACCACTGCCAAGTGATCACTCTTAG...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCGGGAGCTTCTGGATTTaGAGGGGAGGACGTCCATGT +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSGSFWI*RGGRPC
Trigger: ACATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCC...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACAGGCCTGGCAGCCCCTTaGCTGAGCAAGCTGGGCCCA +
Preference number: 2 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTGLAAP*LSKLGP
Trigger: TGGGCCCAGCTTGCTCAGTCAAGGGGCTGCCAGGCC...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCAGAGGGGGACCTCTCTaGACACTTGTGTCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSRGGPL*TLVSKW
Trigger: CCACTTGGACACAAGTGTTCAGAGAGGTCCCCCTCT...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAACCCCCAGGAAGACCTaGAGTCCTGCTGTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLTPRKT*SPAVLE
Trigger: CTCCAGGACAGCAGGACTTCAGGTCTTCCTGGGGGT...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATACCCCCAGGAAGACCTaGAGTCCTGCTGTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHTPRKT*SPAVLE
Trigger: CTCCAGGACAGCAGGACTTCAGGTCTTCCTGGGGGT...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGAGCTGTCGAGGCCCTaGTCCCCAAAGAAGGGACAG +
Preference number: 2 (lower is better)
Translates to: FSCSSEAPCALVSATYLVELSRP*SPKKGQ
Trigger: CTGTCCCTTCTTTGGGGAGCAGGGCCTCGACAGCTC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCTGCGCCTTGGTCTCTaGTACCTATCTGGTACTCTC +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSLRLGL*YLSGTL
Trigger: GAGAGTACCAGATAGGTAGCAGAGACCAAGGCGCAG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCTTTTTCAAGCTACTTaGGAGTGGGGTGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWLFQAT*EWGAGG
Trigger: TCCACCTGCACCCCACTCCCAAGTAGCTTGAAAAAG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGAATGTGTCATTACTTTaGCTGGCTGGGGACAGTGGT +
Preference number: 2 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQNVSLL*LAGDSG
Trigger: ACCACTGTCCCCAGCCAGCCAAAGTAATGACACATT...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCATGCTGGGCAGGGCTaGAATGTGTCATTACTTTGG +
Preference number: 2 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWHAGQG*NVSLLW
Trigger: CCAAAGTAATGACACATTCCAGCCCTGCCCAGCATG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAAGGGGCGTCCCTACCTaGGGTTCCTCCACAAATGAG +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTRGVPT*GSSTNE
Trigger: CTCATTTGTGGAGGAACCCCAGGTAGGGACGCCCCT...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCTGCAGAATGCAAACTaGGGCCAATGGGAACAAGGG +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSLQNAN*GQWEQG
Trigger: CCCTTGTTCCCATTGGCCCCAGTTTGCATTCTGCAG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTTCTCTGCTACCTATCTaGTACTCTCTGTGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCSLLPI*YSLCPC
Trigger: GCAAGGACACAGAGAGTACCAGATAGGTAGCAGAGA...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp GGGGGACAAATGCCAGTCCCAGACGTCCCAGAGGAGAGTTTGTCCTaGGCCAATGAGATGAATGGATGGACGCCTTCTGTCAAGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GGQMPVPDVPEESLS*ANEMNGWTPSVKWE
Trigger: TTCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGTCTGGGACTGGCATTTGTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCCACAAAGGATCCATTTaGAGGGACCAGCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSHKGSI*RDQLGR
Trigger: CCTGCCAAGCTGGTCCCTTCAAATGGATCCTTTGTG...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCATCACTGTCGAGGTTTaGAGGTCCCTGTCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSITVEV*RSLSSG
Trigger: GCCACTTGACAGGGACCTTCAAACCTCGACAGTGAT...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGAATACAGAGGGACTaGACTGTGGAGAACACCAGG +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGIQRD*TVENTR
Trigger: CCTGGTGTTCTCCACAGTGCAGTCCCTCTGTATTCC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGCCTAAGTGTGTTGCATaGACACTGCCCCATTTGTAT +
Preference number: 2 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQPKCVA*TLPHLY
Trigger: ATACAAATGGGGCAGTGTGCATGCAACACACTTAGG...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAATTACTTTGGCTGGCTaGGGACAGTGGTCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTITLAG*GQWSSW
Trigger: CCAGGAGGACCACTGTCCCCAGCCAGCCAAAGTAAT...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTATTGAAGGGACCAGCTTaGCAGGGGCCATGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: FSCSSEAPCALVSATYLVLKGPA*QGPCLS
Trigger: GGAGAGACATGGCCCCTGCCAAGCTGGTCCCTTCAA...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATTTGAAGGGACCAGCTTaGCAGGGGCCATGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHLKGPA*QGPCLS
Trigger: GGAGAGACATGGCCCCTGCCAAGCTGGTCCCTTCAA...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAAGGGGCGTCCCTACCTaGGGTTCCTCCACAAATGAG +
Preference number: 2 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLRGVPT*GSSTNE
Trigger: CTCATTTGTGGAGGAACCCCAGGTAGGGACGCCCCT...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGGAATGGGGGCAGCTTaGCCACACCAATGGAGGTGT +
Preference number: 2 (lower is better)
Translates to: FSCSSEAPCALVSATYLVGMGAA*PHQWRC
Trigger: ACACCTCCATTGGTGTGGCCAAGCTGCCCCCATTCC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGGAATGGGGGCAGCTTaGCCACACCAATGGAGGTGT +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHGMGAA*PHQWRC
Trigger: ACACCTCCATTGGTGTGGCCAAGCTGCCCCCATTCC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAAAAGGCTTGGGGCTTTaGCCAGGAAGCGTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: FSCSSEAPCALVSATYLVKGLGL*PGSVLL
Trigger: CAGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTT...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTAATGAGATGAATGGATaGACGCCTTCTGTCAAGTGG +
Preference number: 2 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCNEMNG*TPSVKW
Trigger: CCACTTGACAGAAGGCGTCCATCCATTCATCTCATT...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGTCTCCCGTTGGAGGTaGCCAACTGTGACCAGTGGT +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHVSRWR*PTVTSG
Trigger: ACCACTGGTCACAGTTGGCCACCTCCAACGGGAGAC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCTAAGAGTGATCACTTaGCAGTGGTTGGAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSLRVIT*QWLEPG
Trigger: ACCTGGCTCCAACCACTGCCAAGTGATCACTCTTAG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp TTGGCCAATGAGATGAATGGATGGACGCCTTCTGTCAAGTGGGAATaGGCTTCTCACCAAAGGCTTGGGGCTTTGGCCAGGAAGCGTCCT +
Preference number: 2 (lower is better)
Translates to: LANEMNGWTPSVKWE*ASHQRLGALARKRP
Trigger: AGGACGCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp TTGAGTGGGGGACAAATGCCAGTCCCAGACGTCCCAGAGGAGAGTTaGTCCTTGGCCAATGAGATGAATGGATGGACGCCTTCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: LSGGQMPVPDVPEES*SLANEMNGWTPSVK
Trigger: CTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGTCTGGGACTGGCATTTGTCCCCCACTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp GCTACCTATCTGGTACTCTCTGTGTCCTTGCATCACTGTCGAGGTTaGAAGGTCCCTGTCAAGTGGCAGAGGGGGACCTCTCTGAACACT +
Preference number: 2 (lower is better)
Translates to: ATYLVLSVSLHHCRG*KVPVKWQRGTSLNT
Trigger: AGTGTTCAGAGAGGTCCCCCTCTGCCACTTGACAGGGACCTTCAAACCTCGACAGTGATGCAAGGACACAGAGAGTACCAGATAGGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp TCTGGTTCGACTGGGTTCTCTTGCTCATCTGAAGCACCCTGCGCCTaGGTCTCTGCTACCTATCTGGTACTCTCTGTGTCCTTGCATCAC +
Preference number: 2 (lower is better)
Translates to: SGSTGFSCSSEAPCA*VSATYLVLSVSLHH
Trigger: GTGATGCAAGGACACAGAGAGTACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAACCCAGTCGAACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGAAAGCTTTGATAATTTaGGTGGGGGACAAATGCCAG +
Preference number: 2 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRKALII*VGDKCQ
Trigger: CTGGCATTTGTCCCCCACTCAAATTATCAAAGCTTT...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAATCACTGTCGAGGTTTaGAGGTCCCTGTCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTITVEV*RSLSSG
Trigger: GCCACTTGACAGGGACCTTCAAACCTCGACAGTGAT...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGTGCCACGCATTATCATaGATGCATGGATACAGTTTC +
Preference number: 2 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQCHALS*MHGYSF
Trigger: GAAACTGTATCCATGCATGCATGATAATGCGTGGCA...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACATCAGACCCCCAAACATaGACACAGCAGCCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTSDPQT*TQQPSN
Trigger: ATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGA...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTATGCAGGTGGATACCCTaGGATGAAGGGAGGTGTGAG +
Preference number: 2 (lower is better)
Translates to: FSCSSEAPCALVSATYLVCRWIP*DEGRCE
Trigger: CTCACACCTCCCTTCATCCCAGGGTATCCACCTGCA...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATATTACTTTGGCTGGCTaGGGACAGTGGTCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHITLAG*GQWSSW
Trigger: CCAGGAGGACCACTGTCCCCAGCCAGCCAAAGTAAT...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTGGCCCTGGAAGCGCATaGACAGGACGGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAGPGSA*TGRGGE
Trigger: CTCCCCACCCCGTCCTGTCCATGCGCTTCCAGGGCC...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCACGCCTTCTGTCAAGTaGGAATTGGCTTCTCACCAA +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSTPSVK*ELASHQ
Trigger: TTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGT...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTAATGAGATGAATGGATaGACGCCTTCTGTCAAGTGG +
Preference number: 2 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSNEMNG*TPSVKW
Trigger: CCACTTGACAGAAGGCGTCCATCCATTCATCTCATT...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCTGGGTCCATTGCAGTaGGATTCTGAGGACCTCAGG +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHLGPLQ*DSEDLR
Trigger: CCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAG...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 90 bp TGTCTCGACTTCCTGATTCCATCTGGAGGAGTACCCTGCACAGCTTaGCAGTTAAGGACACCTTCTGGGAGCTTCTGGATTTGGAGGGGA +
Preference number: 2 (lower is better)
Translates to: CLDFLIPSGGVPCTA*QLRTPSGSFWIWRG
Trigger: TCCCCTCCAAATCCAGAAGCTCCCAGAAGGTGTCCTTAACTGCAAAGCTGTGCAGGGTACTCCTCCAGATGGAATCAGGAAGTCGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACCTTGGCCAATGAGATaGATGGATGGACGCCTTCTG +
Preference number: 2 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLPWPMR*MDGRLL
Trigger: CAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACAGCCAGGCCACTCAGTaGCCCTGCCCTGACCTGGGG +
Preference number: 2 (lower is better)
Translates to: TISTQIHHLNQAHIHKANSQATQ*PCPDLG
Trigger: CCCCAGGTCAGGGCAGGGGCACTGAGTGGCCTGGCT...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGGAATACAGAGGGACTaGACTGTGGAGAACACCAGG +
Preference number: 2 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLGIQRD*TVENTR
Trigger: CCTGGTGTTCTCCACAGTGCAGTCCCTCTGTATTCC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACGGGACCGTGGGGCCCTaGAAGCGCATGGACAGGACG +
Preference number: 2 (lower is better)
Translates to: TISTQIHHLNQAHIHKANGTVGP*KRMDRT
Trigger: CGTCCTGTCCATGCGCTTCCAGGGCCCCACGGTCCC...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGTATGGCTTTACCTATTaGAAACGGACAGAGAAGACA +
Preference number: 2 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQYGFTY*KRTEKT
Trigger: TGTCTTCTCTGTCCGTTTCCAATAGGTAAAGCCATA...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCTACACATATGCATATaGTCTCTGAACACACAATCC +
Preference number: 2 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSLHICI*SLNTQS
Trigger: GGATTGTGTGTTCAGAGATCATATGCATATGTGTAG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTACTTGGGAGTGGGGTaGAGGTGGATACCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVYLGVG*RWIPWD
Trigger: ATCCCAGGGTATCCACCTGCACCCCACTCCCAAGTA...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCATACTTGGGAGTGGGGTaGAGGTGGATACCCTGGGAT +
Preference number: 2 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSYLGVG*RWIPWD
Trigger: ATCCCAGGGTATCCACCTGCACCCCACTCCCAAGTA...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAACACACAATCCCTGTTaGAGTCTCTGCCACGCATTA +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTTHNPC*SLCHAL
Trigger: TAATGCGTGGCAGAGACTGCAACAGGGATTGTGTGT...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCACCATCGCTACCCGATaGCTCCAAGTGTTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: VAVSATHYHACMDTVSSLTIATR*LQVFSG
Trigger: CCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGT...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCTACACATATGCATATaGTCTCTGAACACACAATCC +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSLHICI*SLNTQS
Trigger: GGATTGTGTGTTCAGAGATCATATGCATATGTGTAG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCGTATTGCAGTCTAACTaGTATGGCTTTACCTATTGG +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSVLQSN*YGFTYW
Trigger: CCAATAGGTAAAGCCATATCAGTTAGACTGCAATAC...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATTCAGACCCCCAAACATaGACACAGCAGCCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHSDPQT*TQQPSN
Trigger: ATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGA...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAAATGTGTCATTACTTTaGCTGGCTGGGGACAGTGGT +
Preference number: 2 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLNVSLL*LAGDSG
Trigger: ACCACTGTCCCCAGCCAGCCAAAGTAATGACACATT...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACACAAAGGTCAGCATGCTaGGCAGGGCTGGAATGTGTC +
Preference number: 2 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTQRSAC*AGLECV
Trigger: GACACATTCCAGCCCTGCCCAGCATGCTGACCTTTG...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCACCATCGCTACCCGATaGCTCCAAGTGTTTTCTGGG +
Preference number: 2 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVTIATR*LQVFSG
Trigger: CCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGT...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACATTCTCACCAAAGGCTTaGGGCTTTGGCCAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTFSPKA*GFGQEA
Trigger: CGCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAA...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCTATGGCTTTACCTATTaGAAACGGACAGAGAAGACA +
Preference number: 2 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSYGFTY*KRTEKT
Trigger: TGTCTTCTCTGTCCGTTTCCAATAGGTAAAGCCATA...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATTCTCTGCTACCTATCTaGTACTCTCTGTGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHSLLPI*YSLCPC
Trigger: GCAAGGACACAGAGAGTACCAGATAGGTAGCAGAGA...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTTTGTCCTTGGCCAATaGGATGAATGGATGGACGCC +
Preference number: 2 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVFVLGQ*DEWMDA
Trigger: GGCGTCCATCCATTCATCTCATTGGCCAAGGACAAA...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCATTTGTCCTTGGCCAATaGGATGAATGGATGGACGCC +
Preference number: 2 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSFVLGQ*DEWMDA
Trigger: GGCGTCCATCCATTCATCTCATTGGCCAAGGACAAA...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACATATGCATATGATCTCTaGACACACAATCCCTGTTGC +
Preference number: 2 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTYAYDL*THNPCC
Trigger: GCAACAGGGATTGTGTGTTCAGAGATCATATGCATA...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCACTTTTTCAAGCTACTTaGGAGTGGGGTGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSLFQAT*EWGAGG
Trigger: TCCACCTGCACCCCACTCCCAAGTAGCTTGAAAAAG...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACATGTCATTACTTTGGCTaGCTGGGGACAGTGGTCCTC +
Preference number: 2 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTCHYFG*LGTVVL
Trigger: GAGGACCACTGTCCCCAGCCAGCCAAAGTAATGACA...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGGGTTCCTCCACAAATaGGCTAAAGTCCACAAAGGA +
Preference number: 2 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSGFLHK*AKVHKG
Trigger: TCCTTTGTGGACTTTAGCTCATTTGTGGAGGAACCC...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGTTCCCTAAACATATaGATTGTTTTGTCTCGTGTT +
Preference number: 2 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGSLNI*IVLSRV
Trigger: AACACGAGACAAAACAATCCATATGTTTAGGGAACC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATACCAGGGGACTTTTCTaGTTCCCTAAACATATGGAT +
Preference number: 2 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHTRGLF*FPKHMD
Trigger: ATCCATATGTTTAGGGAACCAGAAAAGTCCCCTGGT...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCACGCATTATCATGCATaGATGGATACAGTTTCCTCC +
Preference number: 2 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVTHYHA*MDTVSS
Trigger: GGAGGAAACTGTATCCATGCATGCATGATAATGCGT...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACAGAAGTAGTAACAGGTaGAGTAGGCTGGGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: TISTQIHHLNQAHIHKANRSSNR*SRLGQE
Trigger: CTCCTGCCCCAGCCTACTCCACCTGTTACTACTTCT...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTCATGCTGGGCAGGGCTaGAATGTGTCATTACTTTGG +
Preference number: 2 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAHAGQG*NVSLLW
Trigger: CCAAAGTAATGACACATTCCAGCCCTGCCCAGCATG...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTACACACAATCCCTGTTaGAGTCTCTGCCACGCATTA +
Preference number: 2 (lower is better)
Translates to: DTISTQIHHLNQAHIHKATHNPC*SLCHAL
Trigger: TAATGCGTGGCAGAGACTGCAACAGGGATTGTGTGT...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR TCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACAAAGCTTTGATAATTTaGGTGGGGGACAAATGCCAG +
Preference number: 2 (lower is better)
Translates to: TISTQIHHLNQAHIHKANKALII*VGDKCQ
Trigger: CTGGCATTTGTCCCCCACTCAAATTATCAAAGCTTT...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp GCCCTGGCGGGGGCCCAGCATGGCTTCCTGGGGCGCTaGCTGGGTCCATTGCAGTGGGATTCTGAGGACCTC +
Preference number: 3 (lower is better)
Translates to: ALAGAQHGFLGR*LGPLQWDSEDL
Trigger: GAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAGGAAGCCATGCTGGGCCCCCGCCAGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp TGGGATAGGCCCTGGCGGGGGCCCAGCATGGCTTCCTaGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTG +
Preference number: 3 (lower is better)
Translates to: WDRPWRGPSMAS*GAAWVHCSGIL
Trigger: CAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAGGAAGCCATGCTGGGCCCCCGCCAGGGCCTATCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp CCAAAGGCTTGGGGCTTTGGCCAGGAAGCGTCCTCCTaGGGACCGTGGGGCCCTGGAAGCGCATGGACAGGA +
Preference number: 3 (lower is better)
Translates to: PKAWGFGQEASS*GPWGPGSAWTG
Trigger: TCCTGTCCATGCGCTTCCAGGGCCCCACGGTCCCCAGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp AGCAGGTGGACAGCAGGGGTGGGCAACCCTGCCAGCTaGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCC +
Preference number: 3 (lower is better)
Translates to: SRWTAGVGNPAS*VLGLLGLEGLP
Trigger: GGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCAGGGTTGCCCACCCCTGCTGTCCACCTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGGGGCCTGGCAGCCCCTaGACTGAGCAAGCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRGPGSP*TEQAGP
Trigger: GGGCCCAGCTTGCTCAGTCAAGGGGCTGCCAGGCCC...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp TGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTaGTTCTCTCTGGCAGCTCCTCCCAGGCATGGGATC +
Preference number: 3 (lower is better)
Translates to: WCPAQGDPQPPF*FSLAAPPRHGI
Trigger: GATCCCATGCCTGGGAGGAGCTGCCAGAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp GGTCTGGGACATGGACCCAGACTAAACCAGCCATCCTaGAGGGCAGGCATCAGGGTGGGGCTGAAAGCCCCG +
Preference number: 3 (lower is better)
Translates to: GLGHGPRLNQPS*RAGIRVGLKAP
Trigger: CGGGGCTTTCAGCCCCACCCTGATGCCTGCCCTCCAGGATGGCTGGTTTAGTCTGGGTCCATGTCCCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGTTTGAAGGGACCAGCTaGGCAGGGGCCATGTCTCTC +
Preference number: 3 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEFEGTS*AGAMSL
Trigger: GAGAGACATGGCCCCTGCCAAGCTGGTCCCTTCAAA...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp CAGCCCTCTGAAGGTCTGGGGTCCCTCCGGCCCACCTaGGGTATCTGGTTCGACTGGGTTCTCTTGCTCATC +
Preference number: 3 (lower is better)
Translates to: QPSEGLGSLRPT*GIWFDWVLLLI
Trigger: GATGAGCAAGAGAACCCAGTCGAACCAGATACCCCAGGTGGGCCGGAGGGACCCCAGACCTTCAGAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGCCTTTTTCAAGCTACTaGGGAGTGGGGTGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEPFSSY*GVGCRW
Trigger: CCACCTGCACCCCACTCCCAAGTAGCTTGAAAAAGG...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGGGCCTGGCAGCCCCTaGACTGAGCAAGCTGGGCCC +
Preference number: 3 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTGPGSP*TEQAGP
Trigger: GGGCCCAGCTTGCTCAGTCAAGGGGCTGCCAGGCCC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGCAAAGGCTTGGGGCTTaGGCCAGGAAGCGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQQRLGA*ARKRPP
Trigger: AGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTTG...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCAAAGGCTTGGGGCTTaGGCCAGGAAGCGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRQRLGA*ARKRPP
Trigger: AGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTTG...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp GGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTaGCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGC +
Preference number: 3 (lower is better)
Translates to: GRPCLEILTCHW*PAQGDPQPPFC
Trigger: GCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp ATGCTGGGCAGGGCTGGAATGTGTCATTACTTTGGCTaGCTGGGGACAGTGGTCCTCCTGGCAGTGGGGAGC +
Preference number: 3 (lower is better)
Translates to: MLGRAGMCHYFG*LGTVVLLAVGS
Trigger: GCTCCCCACTGCCAGGAGGACCACTGTCCCCAGCCAGCCAAAGTAATGACACATTCCAGCCCTGCCCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp CCGATCCCACTCTGGGAATACAGAGGGACTGCACTGTaGAGAACACCAGGGCAGCCCTCTGAAGGTCTGGGG +
Preference number: 3 (lower is better)
Translates to: PIPLWEYRGTAL*RTPGQPSEGLG
Trigger: CCCCAGACCTTCAGAGGGCTGCCCTGGTGTTCTCCACAGTGCAGTCCCTCTGTATTCCCAGAGTGGGATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp GGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTaGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTT +
Preference number: 3 (lower is better)
Translates to: GGRPCLEILTCH*CPAQGDPQPPF
Trigger: AAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTTTTGAAGGGACCAGCTaGGCAGGGGCCATGTCTCTC +
Preference number: 3 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCFEGTS*AGAMSL
Trigger: GAGAGACATGGCCCCTGCCAAGCTGGTCCCTTCAAA...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGGGACAAGGTCTCCCGTaGGAGGTGGCCAACTGTGAC +
Preference number: 3 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRGQGLP*EVANCD
Trigger: GTCACAGTTGGCCACCTCCAACGGGAGACCTTGTCC...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGACCTCTCTGAACACTaGTGTCCAAGTGGGGCTCGC +
Preference number: 3 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCDLSEH*CPSGAR
Trigger: GCGAGCCCCACTTGGACACAAGTGTTCAGAGAGGTC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGATCACTTGGCAGTGGTaGGAGCCAGGTGTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQITWQW*EPGVCQ
Trigger: CTGGCACACACCTGGCTCCAACCACTGCCAAGTGAT...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp GGCCCACCTGGGGTATCTGGTTCGACTGGGTTCTCTTaGTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCT +
Preference number: 3 (lower is better)
Translates to: GPPGVSGSTGFS*SSEAPCALVSA
Trigger: AGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAACCCAGTCGAACCAGATACCCCAGGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCCACAAAGGATCCATTaGAAGGGACCAGCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLPQRIH*KGPAWQ
Trigger: CTGCCAAGCTGGTCCCTTCAAATGGATCCTTTGTGG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCTTCTCACCAAAGGCTaGGGGCTTTGGCCAGGAAGC +
Preference number: 3 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRLLTKG*GLWPGS
Trigger: GCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAAG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTATCACTTGGCAGTGGTaGGAGCCAGGTGTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSITWQW*EPGVCQ
Trigger: CTGGCACACACCTGGCTCCAACCACTGCCAAGTGAT...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGGAATGTGTCATTACTTaGGCTGGCTGGGGACAGTGG +
Preference number: 3 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQECVIT*AGWGQW
Trigger: CCACTGTCCCCAGCCAGCCAAAGTAATGACACATTC...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGAATGTGTCATTACTTaGGCTGGCTGGGGACAGTGG +
Preference number: 3 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCECVIT*AGWGQW
Trigger: CCACTGTCCCCAGCCAGCCAAAGTAATGACACATTC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGTCCCAGAGGAGAGTTaGTCCTTGGCCAATGAGATG +
Preference number: 3 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCVPEES*SLANEM
Trigger: CATCTCATTGGCCAAGGACAAACTCTCCTCTGGGAC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCCTAAGAGTGATCACTaGGCAGTGGTTGGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSPKSDH*AVVGAR
Trigger: CCTGGCTCCAACCACTGCCAAGTGATCACTCTTAGG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCCTCCCCTAAGTGTGTaGCATGCACACTGCCCCATT +
Preference number: 3 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSPPLSV*HAHCPI
Trigger: AATGGGGCAGTGTGCATGCAACACACTTAGGGGAGG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTGGAGGACGTCCATGTTaGGAGATCCTGACCTGTCAC +
Preference number: 3 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSGGRPC*EILTCH
Trigger: GTGACAGGTCAGGATCTCCAAACATGGACGTCCTCC...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp GGCCCACTGAGGGTTAGAGGCCAAAGGTCAGCATGCTaGGCAGGGCTGGAATGTGTCATTACTTTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: GPLRVRGQRSAC*AGLECVITLAG
Trigger: GCCAGCCAAAGTAATGACACATTCCAGCCCTGCCCAGCATGCTGACCTTTGGCCTCTAACCCTCAGTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGTACTCTCTGTGTCCTaGCATCACTGTCGAGGTTTG +
Preference number: 3 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCVLSVS*HHCRGL
Trigger: CAAACCTCGACAGTGATGCAAGGACACAGAGAGTAC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp ATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTaGACTACGTGCTCCACACAGACAGGCTCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: ILPLPEQLSRIL*TTCSTQTGSLG
Trigger: GCCCAGAGAGCCTGTCTGTGTGGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp GGGGCCACTCCTCCCCTAAGTGTGTTGCATGCACACTaGCCCATTTGTATGTGCACACTCATTGCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: GATPPLSVLHAH*PICMCTLIALP
Trigger: TGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACACTTAGGGGAGGAGTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp GGGTTAGAGGCCAAAGGTCAGCATGCTGGGCAGGGCTaGAATGTGTCATTACTTTGGCTGGCTGGGGACAGT +
Preference number: 3 (lower is better)
Translates to: GLEAKGQHAGQG*NVSLLWLAGDS
Trigger: ACTGTCCCCAGCCAGCCAAAGTAATGACACATTCCAGCCCTGCCCAGCATGCTGACCTTTGGCCTCTAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAAGGAATGGGGGCAGCTaGGCCACACCAATGGAGGTG +
Preference number: 3 (lower is better)
Translates to: FSCSSEAPCALVSATYLVRNGGS*ATPMEV
Trigger: CACCTCCATTGGTGTGGCCAAGCTGCCCCCATTCCT...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGGAGGAGAGTTTGTCCTaGGCCAATGAGATGAATGGA +
Preference number: 3 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQEESLS*ANEMNG
Trigger: TCCATTCATCTCATTGGCCAAGGACAAACTCTCCTC...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGAAGCACCCTGCGCCTaGGTCTCTGCTACCTATCTG +
Preference number: 3 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTEAPCA*VSATYL
Trigger: CAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp GATAACAGACACAAAGAGACAAGCAGACAACAGGGGTaGGAGGCGGCTCCCCATCACAGACACAGGCACAGA +
Preference number: 3 (lower is better)
Translates to: DNRHKETSRQQG*EAAPHHRHRHR
Trigger: TCTGTGCCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGTCTGTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp GCATGCACACTGCCCCATTTGTATGTGCACACTCATTaGCCTCCCATCCAGTGGGTCACACACACCTCACCT +
Preference number: 3 (lower is better)
Translates to: ACTLPHLYVHTH*PPIQWVTHTSP
Trigger: AGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTaGAATACTTCTGTATCCTCCCTGTTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: CPPAVPLIGDLG*NTSVSSLFSLS
Trigger: AGAGAGAGAGAACAGGGAGGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp AGTCATTGTGTTCCCCTGGGCCTAAGAGTGATCACTTaGCAGTGGTTGGAGCCAGGTGTGTGCCAGGCAGAA +
Preference number: 3 (lower is better)
Translates to: SHCVPLGLRVIT*QWLEPGVCQAE
Trigger: TTCTGCCTGGCACACACCTGGCTCCAACCACTGCCAAGTGATCACTCTTAGGCCCAGGGGAACACAATGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp CATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTaGGTCACACACACCTCACCTCCCAGGCGATCCTGT +
Preference number: 3 (lower is better)
Translates to: HLYVHTHCPPIQ*VTHTSPPRRSC
Trigger: ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTTCTGTCAAGTGGGAATaGGCTTCTCACCAAAGGCTT +
Preference number: 3 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSSVKWE*ASHQRL
Trigger: AAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGA...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 72 bp CCCAGACGTCCCAGAGGAGAGTTTGTCCTTGGCCAATaGGATGAATGGATGGACGCCTTCTGTCAAGTGGGA +
Preference number: 3 (lower is better)
Translates to: PRRPRGEFVLGQ*DEWMDAFCQVG
Trigger: TCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 72 bp TGGGGTATCTGGTTCGACTGGGTTCTCTTGCTCATCTaGAGCACCCTGCGCCTTGGTCTCTGCTACCTATCT +
Preference number: 3 (lower is better)
Translates to: WGIWFDWVLLLI*STLRLGLCYLS
Trigger: AGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAACCCAGTCGAACCAGATACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp CTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTaGTCCACACAGACAGGCTCTCTGGGCCACACATTA +
Preference number: 3 (lower is better)
Translates to: LPEQLSRILCTT*STQTGSLGHTL
Trigger: TAATGTGTGGCCCAGAGAGCCTGTCTGTGTGGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp GAAAGACTGTCCTCCCTTTTTCAAGCTACTTGGGAGTaGGGTGCAGGTGGATACCCTGGGATGAAGGGAGGT +
Preference number: 3 (lower is better)
Translates to: ERLSSLFQATWE*GAGGYPGMKGG
Trigger: ACCTCCCTTCATCCCAGGGTATCCACCTGCACCCCACTCCCAAGTAGCTTGAAAAAGGGAGGACAGTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp CTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTaGTACTCTCTGTGTCCTTGCATCACTGTCGAGGTT +
Preference number: 3 (lower is better)
Translates to: LKHPAPWSLLPI*YSLCPCITVEV
Trigger: AACCTCGACAGTGATGCAAGGACACAGAGAGTACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp GTTCTCTCCCTTGTGTGTTGTGTGCGTGCTGAATTCTaGGGCCACTCCTCCCCTAAGTGTGTTGCATGCACA +
Preference number: 3 (lower is better)
Translates to: VLSLVCCVRAEF*GHSSPKCVACT
Trigger: TGTGCATGCAACACACTTAGGGGAGGAGTGGCCCCAGAATTCAGCACGCACACAACACACAAGGGAGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp AGTACCCTGCACAGCTTTGCAGTTAAGGACACCTTCTaGGAGCTTCTGGATTTGGAGGGGAGGACGTCCATG +
Preference number: 3 (lower is better)
Translates to: STLHSFAVKDTF*ELLDLEGRTSM
Trigger: CATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCCAGAAGGTGTCCTTAACTGCAAAGCTGTGCAGGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAAGGACCCCAGGGTTTTaGAGAATGACCATCCTGCCC +
Preference number: 3 (lower is better)
Translates to: FSCSSEAPCALVSATYLVRTPGF*RMTILP
Trigger: GGGCAGGATGGTCATTCTCAAAAACCCTGGGGTCCT...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 72 bp TCTCTTACACACACCTGGGATGGTGTCTCGACTTCCTaGTTCCATCTGGAGGAGTACCCTGCACAGCTTTGC +
Preference number: 3 (lower is better)
Translates to: SLTHTWDGVSTS*FHLEEYPAQLC
Trigger: GCAAAGCTGTGCAGGGTACTCCTCCAGATGGAATCAGGAAGTCGAGACACCATCCCAGGTGTGTGTAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp AGAGTGATCACTTGGCAGTGGTTGGAGCCAGGTGTGTaGCAGGCAGAAATTTTCTCCTATATCCACCCCCAG +
Preference number: 3 (lower is better)
Translates to: RVITWQWLEPGV*QAEIFSYIHPQ
Trigger: CTGGGGGTGGATATAGGAGAAAATTTCTGCCTGGCACACACCTGGCTCCAACCACTGCCAAGTGATCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp CTAAGTGTGTTGCATGCACACTGCCCCATTTGTATGTaGACACTCATTGCCCTCCCATCCAGTGGGTCACAC +
Preference number: 3 (lower is better)
Translates to: LSVLHAHCPICM*TLIALPSSGSH
Trigger: GTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp TGTCTCGACTTCCTGATTCCATCTGGAGGAGTACCCTaGACAGCTTTGCAGTTAAGGACACCTTCTGGGAGC +
Preference number: 3 (lower is better)
Translates to: CLDFLIPSGGVP*TALQLRTPSGS
Trigger: GCTCCCAGAAGGTGTCCTTAACTGCAAAGCTGTGCAGGGTACTCCTCCAGATGGAATCAGGAAGTCGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp TTGCATCACTGTCGAGGTTTGAAGGTCCCTGTCAAGTaGCAGAGGGGGACCTCTCTGAACACTTGTGTCCAA +
Preference number: 3 (lower is better)
Translates to: LHHCRGLKVPVK*QRGTSLNTCVQ
Trigger: TTGGACACAAGTGTTCAGAGAGGTCCCCCTCTGCCACTTGACAGGGACCTTCAAACCTCGACAGTGATGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp TTGCAGTTAAGGACACCTTCTGGGAGCTTCTGGATTTaGAGGGGAGGACGTCCATGTTTGGAGATCCTGACC +
Preference number: 3 (lower is better)
Translates to: LQLRTPSGSFWI*RGGRPCLEILT
Trigger: GGTCAGGATCTCCAAACATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCCAGAAGGTGTCCTTAACTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp ACACCTGGGATGGTGTCTCGACTTCCTGATTCCATCTaGAGGAGTACCCTGCACAGCTTTGCAGTTAAGGAC +
Preference number: 3 (lower is better)
Translates to: TPGMVSRLPDSI*RSTLHSFAVKD
Trigger: GTCCTTAACTGCAAAGCTGTGCAGGGTACTCCTCCAGATGGAATCAGGAAGTCGAGACACCATCCCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACCACAAAGGATCCATTaGAAGGGACCAGCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLPQRIH*KGPAWQ
Trigger: CTGCCAAGCTGGTCCCTTCAAATGGATCCTTTGTGG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGAGGAGAGTTTGTCCTaGGCCAATGAGATGAATGGA +
Preference number: 3 (lower is better)
Translates to: RILPLPEQLSRILCTTCSEESLS*ANEMNG
Trigger: TCCATTCATCTCATTGGCCAAGGACAAACTCTCCTC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACACTTCTCACCAAAGGCTaGGGGCTTTGGCCAGGAAGC +
Preference number: 3 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTLLTKG*GLWPGS
Trigger: GCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAAG...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 72 bp ACGTCCCAGAGGAGAGTTTGTCCTTGGCCAATGAGATaGATGGATGGACGCCTTCTGTCAAGTGGGAATTGG +
Preference number: 3 (lower is better)
Translates to: TSQRRVCPWPMR*MDGRLLSSGNW
Trigger: CCAATTCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp GCCAATGAGATGAATGGATGGACGCCTTCTGTCAAGTaGGAATTGGCTTCTCACCAAAGGCTTGGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: ANEMNGWTPSVK*ELASHQRLGAL
Trigger: CAAAGCCCCAAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGTCCATCCATTCATCTCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CCA 72 bp CCCTGTTCTCTCTCTCTCTCTTACACACACCTGGGATaGTGTCTCGACTTCCTGATTCCATCTGGAGGAGTA +
Preference number: 3 (lower is better)
Translates to: PCSLSLSYTHLG*CLDFLIPSGGV
Trigger: TACTCCTCCAGATGGAATCAGGAAGTCGAGACACCATCCCAGGTGTGTGTAAGAGAGAGAGAGAGAACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCGTCCCAGAGGAGAGTTaGTCCTTGGCCAATGAGATG +
Preference number: 3 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVVPEES*SLANEM
Trigger: CATCTCATTGGCCAAGGACAAACTCTCCTCTGGGAC...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCTCTGTCAAGTGGGAATaGGCTTCTCACCAAAGGCTT +
Preference number: 3 (lower is better)
Translates to: VAVSATHYHACMDTVSSLSVKWE*ASHQRL
Trigger: AAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGA...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR-3UTR CAA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACAAACACACAATCCCTGTaGCAGTCTCTGCCACGCATT +
Preference number: 3 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTNTQSL*QSLPRI
Trigger: AATGCGTGGCAGAGACTGCAACAGGGATTGTGTGTT...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR GCA 72 bp TCCATGCACACAACTGTCTTTTCAGACCCCCAAACATaGACACAGCAGCCTTCAAATGTCTCTGAATTCTCT +
Preference number: 3 (lower is better)
Translates to: SMHTTVFSDPQT*TQQPSNVSEFS
Trigger: AGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTGCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR TCA 72 bp TTGTTTTGTCTCGTGTTTAAAGTATTGCAGTCTAACTaGTATGGCTTTACCTATTGGAAACGGACAGAGAAG +
Preference number: 3 (lower is better)
Translates to: LFCLVFKVLQSN*YGFTYWKRTEK
Trigger: CTTCTCTGTCCGTTTCCAATAGGTAAAGCCATATCAGTTAGACTGCAATACTTTAAACACGAGACAAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGCCACTCAGTGCCCCTaGCCTGACCTGGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLATQCP*PDLGAH
Trigger: GTGGGCCCCCAGGTCAGGGCAGGGGCACTGAGTGGC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCCCGGGCCGAGGTTCTaGCGCGTTTCTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLPGPRF*RVSPSP
Trigger: GGGGGAGGGAGAAACGCGCCAGAACCTCGGCCCGGG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGGGTGGACAGCAGGGGTaGGCAACCCTGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEGGQQG*ATLPAG
Trigger: CCCAGCTGGCAGGGTTGCCCACCCCTGCTGTCCACC...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTTCCTGGGCCCTTCCCTaGGAGCACACACGCTCACCT +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPSWALP*EHTRSP
Trigger: AGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGGA...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCAGGGCCTCTCAGCCTaGGCCTTCCCGGGACAGGCT +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLQGLSA*AFPGQA
Trigger: AGCCTGTCCCGGGAAGGCCCAGGCTGAGAGGCCCTG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCAGGAAGCGTCCTCCTaGGGACCGTGGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLQEASS*GPWGPG
Trigger: TCCAGGGCCCCACGGTCCCCAGGAGGACGCTTCCTG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTTTTTGGGATAGGCCCTaGCGGGGGCCCAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPFWDRP*RGPSMA
Trigger: AGCCATGCTGGGCCCCCGCCAGGGCCTATCCCAAAA...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTCTCGCACACTGGGACTaGGGAGGCCTGGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCLAHWD*GGLGPL
Trigger: CAGGGGCCCCAGGCCTCCCCAGTCCCAGTGTGCGAG...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCCTCGCACACTGGGACTaGGGAGGCCTGGGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPLAHWD*GGLGPL
Trigger: CAGGGGCCCCAGGCCTCCCCAGTCCCAGTGTGCGAG...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCTTCCTGTTGGAGGCTaGAGCTCCTCCGCGGCCGAC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLLPVGG*SSSAAD
Trigger: GTCGGCCGCGGAGGAGCTGCAGCCTCCAACAGGAAG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR GCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGCTGGCAGAGCTGGGATaGGGGCACCTTCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQELAELG*GHLQSL
Trigger: CAGCGACTGAAGGTGCCCGCATCCCAGCTCTGCCAG...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR GCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGAGGGGTGGGCAACCCTaGCAGCTGGGTACTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQERGGQP*QLGTRA
Trigger: AGCCCTAGTACCCAGCTGGCAGGGTTGCCCACCCCT...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTGCTCCCGCCGCCGCGTaGAATTCCGCCAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSAPAAA*NSARRA
Trigger: AGCTCGCCTGGCGGAATTGCACGCGGCGGCGGGAGC...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTTCCCCATGTCCTTTGTaGCCCCTCCAAGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPSPCPL*PLQGPA
Trigger: AGCAGGCCCTTGGAGGGGCCACAAAGGACATGGGGA...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGGGCCCTGGAAGCGCATaGACAGGACGGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRGPGSA*TGRGGE
Trigger: CTCCCCACCCCGTCCTGTCCATGCGCTTCCAGGGCC...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGGGGACCGTGGGGCCCTaGAAGCGCATGGACAGGACG +
Preference number: 4 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQGTVGP*KRMDRT
Trigger: CGTCCTGTCCATGCGCTTCCAGGGCCCCACGGTCCC...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGGCCCTGCCTGTCTCTaGCCCAGGACCCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLGPACL*PRTPGF
Trigger: AAACCCTGGGGTCCTGGGCCAGAGACAGGCAGGGCC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCTGGGGCCCCTGGACTaGGCCCTGCCTGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRLGPLD*ALPVSG
Trigger: GCCAGAGACAGGCAGGGCCCAGTCCAGGGGCCCCAG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCTGGGGCCCCTGGACTaGGCCCTGCCTGTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSLGPLD*ALPVSG
Trigger: GCCAGAGACAGGCAGGGCCCAGTCCAGGGGCCCCAG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 72 bp CTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTaGCTTCTCTCTGGCAGCTCCTCCCAGGCATGGGAT +
Preference number: 4 (lower is better)
Translates to: LVPSPGRSTAAF*LLSGSSSQAWD
Trigger: ATCCCATGCCTGGGAGGAGCTGCCAGAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGACCAGGGCAGCCCTCTaGAGGTCTGGGGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWTRAAL*RSGVPP
Trigger: CGGAGGGACCCCAGACCTTCAGAGGGCTGCCCTGGT...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp AGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCGTCCCTGCAACCGTCTaGGCCACTGCAGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RQQESHDHAALAEVARSAVPATV*ATAGLR
Trigger: CCGGAGCCCTGCAGTGGCTCAGACGGTTGCAGGGAC...GGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTCTCCCCTCGCAGGGCTaGTCCAGGGCTGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCLPSQG*SRAAFS
Trigger: GGAGAAAGCAGCCCTGGAGCAGCCCTGCGAGGGGAG...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCCTCCCCTCGCAGGGCTaGTCCAGGGCTGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPLPSQG*SRAAFS
Trigger: GGAGAAAGCAGCCCTGGAGCAGCCCTGCGAGGGGAG...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCCCTGGACTGGGCCCTaGCTGTCTCTGGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRPWTGP*LSLAQD
Trigger: GTCCTGGGCCAGAGACAGGCAGGGCCCAGTCCAGGG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCTCCCGCCGCCGCGTaGAATTCCGCCAGGCGAGCT +
Preference number: 4 (lower is better)
Translates to: RRQQESHDHAALAEVARSAPAAA*NSARRA
Trigger: AGCTCGCCTGGCGGAATTGCACGCGGCGGCGGGAGC...ACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp AGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCAACCGTCTGAGCCACTaGAGGGCTCCGGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: SRSLMIMQHWLRWPGVPPNRLSH*RAPARL
Trigger: GAGTCGGGCCGGAGCCCTGCAGTGGCTCAGACGGTT...GGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCCCCCTGACCCCTGCTaGGGAAAGACTGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLPPDPC*GKTVLP
Trigger: AGGGAGGACAGTCTTTCCCCAGCAGGGGTCAGGGGG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGGAAGCGTCCTCCTaGGGACCGTGGGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWQEASS*GPWGPG
Trigger: TCCAGGGCCCCACGGTCCCCAGGAGGACGCTTCCTG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGCGGGGGCCCAGCATaGCTTCCTGGGGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGGGPA*LPGALP
Trigger: AGGCAGCGCCCCAGGAAGCCATGCTGGGCCCCCGCC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAGTGGGGCTCGCACACTaGGACTGGGGAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTVGLAH*DWGGLG
Trigger: CCCCAGGCCTCCCCAGTCCCAGTGTGCGAGCCCCAC...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGCGGTCAGGGGCCTGTaGAACCCTAGAGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLAVRGL*NPRGWS
Trigger: GCTCCATCCTCTAGGGTTCCACAGGCCCCTGACCGC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTGGAGCAGGGGACATTTaGTGGGAGGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPGAGDI*WEACPQ
Trigger: CTGAGGACATGCCTCCCACCAAATGTCCCCTGCTCC...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGCAAGGGCCTGCTTCATaGCGAAGTCCATGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQQGPAS*RSPCRR
Trigger: CCGGCGGCATGGACTTCGTCATGAAGCAGGCCCTTG...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCTGCCGCAGCGCCTCCTaGCGCTCCTCCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QQESHDHAALAEVARSASCRSAS*RSSSFF
Trigger: GAAAAAGGAGGAGGAGCGGCAGGAGGCGCTGCGGCA...GGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp AGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCAAGTTACGCTCCTCCTCCTaGTGCCGCAGCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RSLMIMQHWLRWPGVPPKLRSSS*CRSASC
Trigger: GCAGGAGGCGCTGCGGCAGCAGGAGGAGGAGCGTAA...CTTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp AGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCGCCTCCATGCGCGCGTaGTTGGCCTTACGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQQESHDHAALAEVARSAASMRA*LALRSS
Trigger: GGAGGAGCGTAAGGCCAAGCACGCGCGCATGGAGGC...GGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTGTGGGGTGGCTGCTTTaGCCACCAGCTGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSVGWLL*PPAVPL
Trigger: CAGGGGGACAGCTGGTGGGCAAAGCAGCCACCCCAC...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCAAGCCCAACCTGGCGGTCCCTaGAACCGTCTGAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ESHDHAALAEVARSASQAQPGGP*NRLSHC
Trigger: GCAGTGGCTCAGACGGTTGCAGGGACCGCCAGGTTG...GGCTTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp GAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCAAGCCTGCATGCAGCGCTCCTaGCTGGCCTGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ESHDHAALAEVARSASQACMQRS*LAWLGK
Trigger: CTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCA...GGCTTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCCCATGCCGCCGGCTCTaGTTAGCGTGCCTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPPCRRL*LACLSP
Trigger: TGGGCTAAGGCACGCTAACCAGAGCCGGCGGCATGG...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCCATGCCGCCGGCTCTaGTTAGCGTGCCTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRPCRRL*LACLSP
Trigger: TGGGCTAAGGCACGCTAACCAGAGCCGGCGGCATGG...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTCAAGCTACTTGGGAGTaGGGTGCAGGTGGATACCCT +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPQATWE*GAGGYP
Trigger: AGGGTATCCACCTGCACCCCACTCCCAAGTAGCTTG...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTCAAAGGTCAGCATGCTaGGCAGGGCTGGAATGTGTC +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPQRSAC*AGLECV
Trigger: GACACATTCCAGCCCTGCCCAGCATGCTGACCTTTG...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTTGGAGGTGTTCCCCATaGCATAGACCATCGCTACCC +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPWRCSP*HRPSLP
Trigger: GGGTAGCGATGGTCTATGCCATGGGGAACACCTCCA...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGGACAAGGTCTCCCGTTaGAGGTGGCCAACTGTGACC +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEDKVSR*RWPTVT
Trigger: GGTCACAGTTGGCCACCTCCAACGGGAGACCTTGTC...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGGCGGGGGCCCAGCATaGCTTCCTGGGGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTGGGPA*LPGALP
Trigger: AGGCAGCGCCCCAGGAAGCCATGCTGGGCCCCCGCC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTTTTTGGGATAGGCCCTaGCGGGGGCCCAGCATGGCT +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCFWDRP*RGPSMA
Trigger: AGCCATGCTGGGCCCCCGCCAGGGCCTATCCCAAAA...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCAGAGGGACTGCACTGTaGAGAACACCAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLRGTAL*RTPGQP
Trigger: GGGCTGCCCTGGTGTTCTCCACAGTGCAGTCCCTCT...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGGCATGTCCTCAGGCCTaGGAGACCAGGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWACPQA*ETRLAP
Trigger: TGGGGCCAGCCTGGTCTCCCAGGCCTGAGGACATGC...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCAAGCCGCGCATGAAGCGGGGTaGGCAAGGAGACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ESHDHAALAEVARSASQAAHEAG*ARRQQE
Trigger: CTCCTGCTGTCTCCTTGCCCACCCCGCTTCATGCGC...GGCTTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512824.5
3UTR CAA 72 bp CCCTGTCAAGTGGCAGAGGGGGACCTCTCTGAACACTaGTGTCCAAGTGGGGCTCGCACACTGGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: PCQVAEGDLSEH*CPSGARTLGLG
Trigger: CCCCAGTCCCAGTGTGCGAGCCCCACTTGGACACAAGTGTTCAGAGAGGTCCCCCTCTGCCACTTGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGTCATGCAGCACTGGCTaGGGTGGCCAGGAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GDSRSLMIMQHWLRWPGVSCSTG*GGQECL
Trigger: GAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGA...CACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGCCCCTCCAAGGGCCTaGTTCATGACGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLAPPRA*FMTKSM
Trigger: CATGGACTTCGTCATGAAGCAGGCCCTTGGAGGGGC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGTGCCGCAGCGCCTCCTaGCGCTCCTCCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWCRSAS*RSSSFF
Trigger: GAAAAAGGAGGAGGAGCGGCAGGAGGCGCTGCGGCA...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGTCATCTGAAGCACCCTaGGCCTTGGTCTCTGCTACC +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQESSEAP*ALVSAT
Trigger: GGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGA...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTTCGACTGGGTTCTCTTaGTCATCTGAAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPSTGFS*SSEAPC
Trigger: GCAGGGTGCTTCAGATGAGCAAGAGAACCCAGTCGA...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGAGGCTGTGGGGTGGCTaGTTTGCCCACCAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRRLWGG*FAHQLS
Trigger: GGACAGCTGGTGGGCAAAGCAGCCACCCCACAGCCT...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGGCAGAGCAGATAGCATaGCAGGGACCACACCTTCCT +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEAEQIA*QGPHLP
Trigger: AGGAAGGTGTGGTCCCTGCCATGCTATCTGCTCTGC...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTTGCATGCAGCGCTCCTaGCTGGCCTGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSCMQRS*LAWLGK
Trigger: CTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCA...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCCCATGCGCGCGTGCTTaGCCTTACGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RQQESHDHAALAEVARSAPCARA*PYAPPP
Trigger: AGGAGGAGGAGCGTAAGGCCAAGCACGCGCGCATGG...GGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTTGAAGGGACCAGCTTaGCAGGGGCCATGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLLKGPA*QGPCLS
Trigger: GGAGAGACATGGCCCCTGCCAAGCTGGTCCCTTCAA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGTCCTGGGGCGCTGCCTaGGTCCATTGCAGTGGGATT +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRSWGAA*VHCSGI
Trigger: AATCCCACTGCAATGGACCCAGGCAGCGCCCCAGGA...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGTAGGTCAAGGGAGCTaGAGCTGTCGAGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCVGQGS*SCRGPA
Trigger: AGCAGGGCCTCGACAGCTCCAGCTCCCTTGACCTAC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGCCCACCTGGGGTATCTaGTTCGACTGGGTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEPTWGI*FDWVLL
Trigger: CAAGAGAACCCAGTCGAACCAGATACCCCAGGTGGG...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAAGCCCTCTGAAGGTCTaGGGTCCCTCCGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTSPLKV*GPSGPP
Trigger: AGGTGGGCCGGAGGGACCCCAGACCTTCAGAGGGCT...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTGCCCTCCCATCCAGTaGGTCACACACACCTCACCT +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLCPPIQ*VTHTSP
Trigger: AGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGTGCGTGCTGAATTCTaGGGCCACTCCTCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLVRAEF*GHSSPK
Trigger: CTTAGGGGAGGAGTGGCCCCAGAATTCAGCACGCAC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGCTAGCCACAAGGCTGTaGGGTGGCTGCTTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQLATRL*GGCFAH
Trigger: GTGGGCAAAGCAGCCACCCCACAGCCTTGTGGCTAG...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGGGCAACCCTGCCAGCTaGGTACTAGGGCTATTGGGG +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRGNPAS*VLGLLG
Trigger: CCCCAATAGCCCTAGTACCCAGCTGGCAGGGTTGCC...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCTGG +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLLAGLA*EDVTTW
Trigger: CCAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR TCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGGCCTGGCAGCCCCTTaGCTGAGCAAGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTGLAAP*LSKLGP
Trigger: TGGGCCCAGCTTGCTCAGTCAAGGGGCTGCCAGGCC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTTTTGTCCTTGGCCAATaGGATGAATGGATGGACGCC +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPFVLGQ*DEWMDA
Trigger: GGCGTCCATCCATTCATCTCATTGGCCAAGGACAAA...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAACCAGGGCAGCCCTCTaGAGGTCTGGGGTCCCTCCG +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTTRAAL*RSGVPP
Trigger: CGGAGGGACCCCAGACCTTCAGAGGGCTGCCCTGGT...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCGTGTTGTGTGCGTGCTaGATTCTGGGGCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPVLCAC*ILGPLL
Trigger: GAGGAGTGGCCCCAGAATTCAGCACGCACACAACAC...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCAATGGCTTGGGAAGATGTaGCAACCTGGCGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QESHDHAALAEVARSASQWLGKM*QPGGPC
Trigger: GCAGGGACCGCCAGGTTGTCACATCTTCCCAAGCCA...TTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGGCCCACGGCAGAATTTaGATGCAGCGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWAHGRI*MQRSWL
Trigger: CAGCCAGGAGCGCTGCATGCAAATTCTGCCGTGGGC...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCGCCCACGGCAGAATTTaGATGCAGCGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQQESHDHAALAEVARSAAHGRI*MQRSWL
Trigger: CAGCCAGGAGCGCTGCATGCAAATTCTGCCGTGGGC...GGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp AGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCGCCCCTCCAAGGGCCTaGTTCATGACGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: SRSLMIMQHWLRWPGVPPAPPRA*FMTKSM
Trigger: CATGGACTTCGTCATGAAGCAGGCCCTTGGAGGGGC...GGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGTCCTCCTCCTTTTTCTaGGCGTCGGGGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRSSSFF*ASGSFS
Trigger: GGAGAAGGACCCCGACGCGCAGAAAAAGGAGGAGGA...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGCCTCCATGCGCGCGTaGTTGGCCTTACGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSASMRA*LALRSS
Trigger: GGAGGAGCGTAAGGCCAAGCACGCGCGCATGGAGGC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTACTTGGGAGTGGGGTaGAGGTGGATACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLYLGVG*RWIPWD
Trigger: ATCCCAGGGTATCCACCTGCACCCCACTCCCAAGTA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGGAGCTGTCGAGGCCCTaGTCCCCAAAGAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWELSRP*SPKKGQ
Trigger: CTGTCCCTTCTTTGGGGAGCAGGGCCTCGACAGCTC...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTCTCTCACGTATTCTGTaGACTACGTGCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPLSRIL*TTCSTQ
Trigger: CTGTGTGGAGCACGTAGTGCACAGAATACGTGAGAG...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GCAAGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGCGAGGTGGTTCCTTCTaGTATTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: ARRQQESHDHAALAEVARRGGSF*YSSSRR
Trigger: GCGGCGGGAGCTGGAATAGCAGAAGGAACCACCTCG...CCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCTGCATGCAGCGCTCCTaGCTGGCCTGGCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSCMQRS*LAWLGK
Trigger: CTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCA...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTCCATGCCGCCGGCTCTaGTTAGCGTGCCTTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRQQESHDHAALAEVARSPCRRL*LACLSP
Trigger: TGGGCTAAGGCACGCTAACCAGAGCCGGCGGCATGG...ACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp AGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCCATGTCCTTTGTaGCCCCTCCAAGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RQQESHDHAALAEVARSASPCPL*PLQGPA
Trigger: AGCAGGCCCTTGGAGGGGCCACAAAGGACATGGGGA...GGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTCATGCTGGGCAGGGCTaGAATGTGTCATTACTTTGG +
Preference number: 4 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPHAGQG*NVSLLW
Trigger: CCAAAGTAATGACACATTCCAGCCCTGCCCAGCATG...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGAGGGGCGTCCCTACCTaGGGTTCCTCCACAAATGAG +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRRGVPT*GSSTNE
Trigger: CTCATTTGTGGAGGAACCCCAGGTAGGGACGCCCCT...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTGGAGGTGTTCCCCATaGCATAGACCATCGCTACCC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLWRCSP*HRPSLP
Trigger: GGGTAGCGATGGTCTATGCCATGGGGAACACCTCCA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGATGGACAGGACGGGGTaGGGAGAGGGGTGGATAGGA +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWMDRTG*GEGWIG
Trigger: TCCTATCCACCCCTCTCCCCACCCCGTCCTGTCCAT...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGTCTCCCGTTGGAGGTaGCCAACTGTGACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCVSRWR*PTVTSG
Trigger: ACCACTGGTCACAGTTGGCCACCTCCAACGGGAGAC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACCTGGCCCCTGCTTTTaGGATAGGCCCTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTPGPCF*DRPWRG
Trigger: CCCCCGCCAGGGCCTATCCCAAAAGCAGGGGCCAGG...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGCCCCGATCCCACTCTaGGAATACAGAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCAPIPL*EYRGTA
Trigger: TGCAGTCCCTCTGTATTCCCAGAGTGGGATCGGGGC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCGAGGGGTCTGGGACATaGACCCAGACTAAACCAGCC +
Preference number: 4 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPEGSGT*TQTKPA
Trigger: GGCTGGTTTAGTCTGGGTCCATGTCCCAGACCCCTC...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTTCACTTGGCAGTGGTTaGAGCCAGGTGTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCSLGSG*SQVCAR
Trigger: CCTGGCACACACCTGGCTCCAACCACTGCCAAGTGA...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTGTGCGTGCTGAATTCTaGGGCCACTCCTCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCVRAEF*GHSSPK
Trigger: CTTAGGGGAGGAGTGGCCCCAGAATTCAGCACGCAC...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCTAGCCACAAGGCTGTaGGGTGGCTGCTTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRLATRL*GGCFAH
Trigger: GTGGGCAAAGCAGCCACCCCACAGCCTTGTGGCTAG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGGTGGACAGCAGGGGTaGGCAACCCTGCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTGGQQG*ATLPAG
Trigger: CCCAGCTGGCAGGGTTGCCCACCCCTGCTGTCCACC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCAAGCCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCTGG +
Preference number: 4 (lower is better)
Translates to: ESHDHAALAEVARSASQALAGLA*EDVTTW
Trigger: CCAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAG...GGCTTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
3UTR CAA 72 bp GGGAGCTTCTGGATTTGGAGGGGAGGACGTCCATGTTaGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GSFWIWRGGRPC*EILTCHWCPAQ
Trigger: CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGGCCTGGCAGCCCCTTaGCTGAGCAAGCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLGLAAP*LSKLGP
Trigger: TGGGCCCAGCTTGCTCAGTCAAGGGGCTGCCAGGCC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGTCCCTGCAACCGTCTaGGCCACTGCAGGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLVPATV*ATAGLR
Trigger: CCGGAGCCCTGCAGTGGCTCAGACGGTTGCAGGGAC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR GCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGACGGCAGAATTTGCATaGAGCGCTCCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWTAEFA*SAPGWP
Trigger: AGGCCAGCCAGGAGCGCTGCATGCAAATTCTGCCGT...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGTCCTCCTCCTTTTTCTaGGCGTCGGGGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRSSSFF*ASGSFS
Trigger: GGAGAAGGACCCCGACGCGCAGAAAAAGGAGGAGGA...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACATTACGCTCCTCCTCCTaGTGCCGCAGCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTLRSSS*CRSASC
Trigger: GCAGGAGGCGCTGCGGCAGCAGGAGGAGGAGCGTAA...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGTTATCTCGGATCTGCTaGCGGACCTTCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRLSRIC*RTFSRS
Trigger: GGAGCGGGAGAAGGTCCGGCAGCAGATCCGAGATAA...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTTTATCTCGGATCTGCTaGCGGACCTTCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: DSRSLMIMQHWLRWPGVPLSRIC*RTFSRS
Trigger: GGAGCGGGAGAAGGTCCGGCAGCAGATCCGAGATAA...AGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGGCTGCCTGGGTCCATTaGAGTGGGATTCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRAAWVH*SGILRT
Trigger: GGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGC...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACCCTGGACTGGGCCCTaGCTGTCTCTGGCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLPWTGP*LSLAQD
Trigger: GTCCTGGGCCAGAGACAGGCAGGGCCCAGTCCAGGG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGTGGGGTGGCTGCTTTaGCCACCAGCTGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTVGWLL*PPAVPL
Trigger: CAGGGGGACAGCTGGTGGGCAAAGCAGCCACCCCAC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGCCCCAGCCTCCCTGTaGGGTCAGGGGCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHAPASL*GQGPVE
Trigger: TTCCACAGGCCCCTGACCGCACAGGGAGGCTGGGGC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGCCCCAGCCTCCCTGTaGGGTCAGGGGCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVAPASL*GQGPVE
Trigger: TTCCACAGGCCCCTGACCGCACAGGGAGGCTGGGGC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTTCCTTATCTCGGATCTaGTGCCGGACCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: DSRSLMIMQHWLRWPGVPSLSRI*CRTFSR
Trigger: GCGGGAGAAGGTCCGGCAGCAGATCCGAGATAAGGA...AGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGACAACCTTTGCTTCCTaGCAGAGCTGGGATGCGGGC +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRTTFAS*QSWDAG
Trigger: GCCCGCATCCCAGCTCTGCCAGGAAGCAAAGGTTGT...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCTGGGGCAGGAGGCCTaGTTACTTCTTGAACATGTC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLLGQEA*LLLEHV
Trigger: GACATGTTCAAGAAGTAACCAGGCCTCCTGCCCCAG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGGCCCTGGAAGCGCATaGACAGGACGGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHGPGSA*TGRGGE
Trigger: CTCCCCACCCCGTCCTGTCCATGCGCTTCCAGGGCC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTATCCTCCTGGGGACCGTaGGGCCCTGGAAGCGCATGG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVSSWGP*GPGSAW
Trigger: CCATGCGCTTCCAGGGCCCCACGGTCCCCAGGAGGA...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAGCCAACTGTGACCAGTaGTCTCAGGGCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTANCDQ*SQGWEG
Trigger: CCCTTCCCAGCCCTGAGACCACTGGTCACAGTTGGC...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGGACAAGGTCTCCCGTTaGAGGTGGCCAACTGTGACC +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWDKVSR*RWPTVT
Trigger: GGTCACAGTTGGCCACCTCCAACGGGAGACCTTGTC...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCAAGCACCCTGCGCCTTaGTCTCTGCTACCTATCTGG +
Preference number: 4 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPKHPAP*SLLPIW
Trigger: CCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTT...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAAGCCCTCTGAAGGTCTaGGGTCCCTCCGGCCCACCT +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTSPLKV*GPSGPP
Trigger: AGGTGGGCCGGAGGGACCCCAGACCTTCAGAGGGCT...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCTAAACCAGCCATCCTaGAGGGCAGGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSLNQPS*RAGIRV
Trigger: CACCCTGATGCCTGCCCTCCAGGATGGCTGGTTTAG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGAAGTCCTGCTGTCCTaGAGCAGAATAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLEVLLS*SRIEGS
Trigger: AGACCCCTCTATTCTGCTCCAGGACAGCAGGACTTC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCAGAGGATGGAGCAGGTaGACAGCAGGGGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSRGWSR*TAGVGN
Trigger: GTTGCCCACCCCTGCTGTCCACCTGCTCCATCCTCT...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTCCCGACTCCACGAGGTaGTTCCTTCTGCTATTCCAG +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCPDSTR*FLLLFQ
Trigger: CTGGAATAGCAGAAGGAACCACCTCGTGGAGTCGGG...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR TCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGCAGCAGAGGTGGCAGTaGAATCAAGGAGACATGGGA +
Preference number: 4 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQQQRWQ*NQGDMG
Trigger: TCCCATGTCTCCTTGATTTCACTGCCACCTCTGCTG...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR TCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTATGGCAGCCCCTTGACTaGGCAAGCTGGGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLWQPLD*ASWAQP
Trigger: AGGCTGGGCCCAGCTTGCTCAGTCAAGGGGCTGCCA...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCCTTGGCCAATGAGATaGATGGATGGACGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRPWPMR*MDGRLL
Trigger: CAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGG...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGAGAGGGGGACCTCTCTaGACACTTGTGTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWRGGPL*TLVSKW
Trigger: CCACTTGGACACAAGTGTTCAGAGAGGTCCCCCTCT...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGGTTCTCTTGCTCATCTaGAGCACCCTGCGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRVLLLI*STLRLG
Trigger: ACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAAC...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACATCCCAGGCGATCCTGTaGGGATTCTGCCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTSQAIL*GFCPCQ
Trigger: CTGGCAGGGGCAGAATCCTCACAGGATCGCCTGGGA...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCGGTGTCTCGACTTCCTaGTTCCATCTGGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPGVSTS*FHLEEY
Trigger: GTACTCCTCCAGATGGAATCAGGAAGTCGAGACACC...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGGGTGTCTCGACTTCCTaGTTCCATCTGGAGGAGTAC +
Preference number: 4 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQGVSTS*FHLEEY
Trigger: GTACTCCTCCAGATGGAATCAGGAAGTCGAGACACC...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CAAGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAACGGCAGAATTTGCATaGAGCGCTCCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: QGDSRSLMIMQHWLRWPGTAEFA*SAPGWP
Trigger: AGGCCAGCCAGGAGCGCTGCATGCAAATTCTGCCGT...TCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp CAAGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGACGGCTCTGGTTAGCGTaGCTTAGCCCACGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: QGDSRSLMIMQHWLRWPGRLWLA*LSPRQN
Trigger: ATTCTGCCGTGGGCTAAGGCACGCTAACCAGAGCCG...TCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp AGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTTCCTCCTCCTTTTTCTaGGCGTCGGGGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RRQQESHDHAALAEVARSSSSFF*ASGSFS
Trigger: GGAGAAGGACCCCGACGCGCAGAAAAAGGAGGAGGA...ACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGCCTCCATGCGCGCGTaGTTGGCCTTACGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLASMRA*LALRSS
Trigger: GGAGGAGCGTAAGGCCAAGCACGCGCGCATGGAGGC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCGCCACTCAGTGCCCCTaGCCTGACCTGGGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVATQCP*PDLGAH
Trigger: GTGGGCCCCCAGGTCAGGGCAGGGGCACTGAGTGGC...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGCCAGGCCACTCAGTaGCCCTGCCCTGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLSQATQ*PCPDLG
Trigger: CCCCAGGTCAGGGCAGGGGCACTGAGTGGCCTGGCT...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGGCTTCCTGGGGCGCTaGCTGGGTCCATTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVGFLGR*LGPLQW
Trigger: CCACTGCAATGGACCCAGGCAGCGCCCCAGGAAGCC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTTCGACTGGGTTCTCTTaGTCATCTGAAGCACCCTGC +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCSTGFS*SSEAPC
Trigger: GCAGGGTGCTTCAGATGAGCAAGAGAACCCAGTCGA...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAGGGCCACACATTAGCTaGTCTCCACAGCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTGPHIS*SPQPGL
Trigger: CAGACCTGGCTGTGGAGAGCAGCTAATGTGTGGCCC...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCCCTTGTGTGTTGTGTaGGTGCTGAATTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWPLCVV*VLNSGA
Trigger: GGCCCCAGAATTCAGCACGCACACAACACACAAGGG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGATAGGGGATCTGGGCTaGAATACTTCTGTATCCTCC +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEIGDLG*NTSVSS
Trigger: GGAGGATACAGAAGTATTGCAGCCCAGATCCCCTAT...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATAACCGTCTGAGCCACTaGAGGGCTCCGGCCCGACTC +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHNRLSH*RAPARL
Trigger: GAGTCGGGCCGGAGCCCTGCAGTGGCTCAGACGGTT...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCTCCCCATGTCCTTTGTaGCCCCTCCAAGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSSPCPL*PLQGPA
Trigger: AGCAGGCCCTTGGAGGGGCCACAAAGGACATGGGGA...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCCTGGGGCAGGAGGCCTaGTTACTTCTTGAACATGTC +
Preference number: 4 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPLGQEA*LLLEHV
Trigger: GACATGTTCAAGAAGTAACCAGGCCTCCTGCCCCAG...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGTGCAGGTGGATACCCTaGGATGAAGGGAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWCRWIP*DEGRCE
Trigger: CTCACACCTCCCTTCATCCCAGGGTATCCACCTGCA...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCAAGCTACTTGGGAGTaGGGTGCAGGTGGATACCCT +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSQATWE*GAGGYP
Trigger: AGGGTATCCACCTGCACCCCACTCCCAAGTAGCTTG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAAAAGGCTTGGGGCTTTaGCCAGGAAGCGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTKGLGL*PGSVLL
Trigger: CAGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTT...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTTTCTCACCAAAGGCTTaGGGCTTTGGCCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSFSPKA*GFGQEA
Trigger: CGCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAA...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCTGGGTCCATTGCAGTaGGATTCTGAGGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRLGPLQ*DSEDLR
Trigger: CCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCTGGGTCCATTGCAGTaGGATTCTGAGGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWLGPLQ*DSEDLR
Trigger: CCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGTGGGGCTCGCACACTaGGACTGGGGAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSVGLAH*DWGGLG
Trigger: CCCCAGGCCTCCCCAGTCCCAGTGTGCGAGCCCCAC...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTACACTTGTGTCCAAGTaGGGCTCGCACACTGGGACT +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSTLVSK*GSHTGT
Trigger: AGTCCCAGTGTGCGAGCCCCACTTGGACACAAGTGT...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGACACTTGTGTCCAAGTaGGGCTCGCACACTGGGACT +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRTLVSK*GSHTGT
Trigger: AGTCCCAGTGTGCGAGCCCCACTTGGACACAAGTGT...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCCCACCTGGGGTATCTaGTTCGACTGGGTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRPTWGI*FDWVLL
Trigger: CAAGAGAACCCAGTCGAACCAGATACCCCAGGTGGG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCGAGGGGTCTGGGACATaGACCCAGACTAAACCAGCC +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSEGSGT*TQTKPA
Trigger: GGCTGGTTTAGTCTGGGTCCATGTCCCAGACCCCTC...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCTAAGAGTGATCACTTaGCAGTGGTTGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLLRVIT*QWLEPG
Trigger: ACCTGGCTCCAACCACTGCCAAGTGATCACTCTTAG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCCTTCTGGGAGCTTCTaGATTTGGAGGGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWPSGSF*IWRGGR
Trigger: ACGTCCTCCCCTCCAAATCCAGAAGCTCCCAGAAGG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGCCTTCTGGGAGCTTCTaGATTTGGAGGGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRPSGSF*IWRGGR
Trigger: ACGTCCTCCCCTCCAAATCCAGAAGCTCCCAGAAGG...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCAGAGGATGGAGCAGGTaGACAGCAGGGGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSRGWSR*TAGVGN
Trigger: GTTGCCCACCCCTGCTGTCCACCTGCTCCATCCTCT...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGCGGTCAGGGGCCTGTaGAACCCTAGAGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTAVRGL*NPRGWS
Trigger: GCTCCATCCTCTAGGGTTCCACAGGCCCCTGACCGC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGCATGTCCTCAGGCCTaGGAGACCAGGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLACPQA*ETRLAP
Trigger: TGGGGCCAGCCTGGTCTCCCAGGCCTGAGGACATGC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GCAAGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGGAAGATGTGACAACCTaGCGGTCCCTGCAACCGTCT +
Preference number: 4 (lower is better)
Translates to: ARRQQESHDHAALAEVAREDVTT*RSLQPS
Trigger: AGACGGTTGCAGGGACCGCCAGGTTGTCACATCTTC...CCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CCA 90 bp GACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTATGATCATGCAGCACTaGCTGAGGTGGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: DSRSLMIMQHWLRWPGVPMIMQH*LRWPGV
Trigger: CACTCCTGGCCACCTCAGCCAGTGCTGCATGATCAT...AGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
3UTR CAA 72 bp GGCCCTGCCTGTCTCTGGCCCAGGACCCCAGGGTTTTaGAGAATGACCATCCTGCCCAGGATAACAGACACA +
Preference number: 4 (lower is better)
Translates to: GPACLWPRTPGF*RMTILPRITDT
Trigger: TGTGTCTGTTATCCTGGGCAGGATGGTCATTCTCAAAAACCCTGGGGTCCTGGGCCAGAGACAGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCACAAAGGATCCATTTaGAGGGACCAGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSHKGSI*RDQLGR
Trigger: CCTGCCAAGCTGGTCCCTTCAAATGGATCCTTTGTG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCACAAAGGATCCATTTaGAGGGACCAGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWHKGSI*RDQLGR
Trigger: CCTGCCAAGCTGGTCCCTTCAAATGGATCCTTTGTG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTTTTGTCCTTGGCCAATaGGATGAATGGATGGACGCC +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCFVLGQ*DEWMDA
Trigger: GGCGTCCATCCATTCATCTCATTGGCCAAGGACAAA...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGGAGGTGGCCAACTGTaGCCAGTGGTCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHGGGQL*PVVSGL
Trigger: CAGCCCTGAGACCACTGGTCACAGTTGGCCACCTCC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGGAGGTGGCCAACTGTaGCCAGTGGTCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVGGGQL*PVVSGL
Trigger: CAGCCCTGAGACCACTGGTCACAGTTGGCCACCTCC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTATCACTGTCGAGGTTTaGAGGTCCCTGTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSITVEV*RSLSSG
Trigger: GCCACTTGACAGGGACCTTCAAACCTCGACAGTGAT...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCATGTTTGGAGATCCTaGCCTGTCACTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSHVWRS*PVTGAQ
Trigger: CTGGGCACCAGTGACAGGTCAGGATCTCCAAACATG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATTCTGTCCGCCTCGAATaGCTGCCGAGCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHSVRLE*LPSCRA
Trigger: TGCCCTGCAGCTCGGCAGGCATTCGAGGCGGACAGA...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTATGCCGCAGCGCCTCCTaGCGCTCCTCCTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLCRSAS*RSSSFF
Trigger: GAAAAAGGAGGAGGAGCGGCAGGAGGCGCTGCGGCA...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCTACTTGGGAGTGGGGTaGAGGTGGATACCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSYLGVG*RWIPWD
Trigger: ATCCCAGGGTATCCACCTGCACCCCACTCCCAAGTA...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCCCACAGCCGCCTTTTTaGTTCTCTCTGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSPQPPF*FSLAAP
Trigger: AGGAGCTGCCAGAGAGAAGCAAAAAGGCGGCTGTGG...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAAGGGGTGGGCAACCCTaGCAGCTGGGTACTAGGGCT +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVRGGQP*QLGTRA
Trigger: AGCCCTAGTACCCAGCTGGCAGGGTTGCCCACCCCT...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCGCGCTCCCTCCTGCCTaGGCTAGCACACGTGCACGC +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVALPPA*ASTRAR
Trigger: GCGTGCACGTGTGCTAGCCCAGGCAGGAGGGAGCGC...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGCTTCCTGGCAGAGCTaGGATGCGGGCACCTTCAGT +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTASWQS*DAGTFS
Trigger: ACTGAAGGTGCCCGCATCCCAGCTCTGCCAGGAAGC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTACCATGCGCGCGTGCTTaGCCTTACGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVPCARA*PYAPPP
Trigger: AGGAGGAGGAGCGTAAGGCCAAGCACGCGCGCATGG...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGAGAAGTAGTAACAGGTaGAGTAGGCTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRRSSNR*SRLGQE
Trigger: CTCCTGCCCCAGCCTACTCCACCTGTTACTACTTCT...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACCCCCTGACCCCTGCTaGGGAAAGACTGTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLPPDPC*GKTVLP
Trigger: AGGGAGGACAGTCTTTCCCCAGCAGGGGTCAGGGGG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTTGTCATTACTTTGGCTaGCTGGGGACAGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSCHYFG*LGTVVL
Trigger: GAGGACCACTGTCCCCAGCCAGCCAAAGTAATGACA...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCAGGGGCGTCCCTACCTaGGGTTCCTCCACAAATGAG +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSRGVPT*GSSTNE
Trigger: CTCATTTGTGGAGGAACCCCAGGTAGGGACGCCCCT...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCCTCCTGGGGACCGTaGGGCCCTGGAAGCGCATGG +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVSSWGP*GPGSAW
Trigger: CCATGCGCTTCCAGGGCCCCACGGTCCCCAGGAGGA...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCCCTGGCCCCTGCTTTTaGGATAGGCCCTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVPGPCF*DRPWRG
Trigger: CCCCCGCCAGGGCCTATCCCAAAAGCAGGGGCCAGG...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATTCCCTCCGGCCCACCTaGGGTATCTGGTTCGACTGG +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHSLRPT*GIWFDW
Trigger: CCAGTCGAACCAGATACCCCAGGTGGGCCGGAGGGA...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGCAGGGGACATTTGGTaGGAGGCATGTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTAGDIW*EACPQA
Trigger: GGCCTGAGGACATGCCTCCCACCAAATGTCCCCTGC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGAGCAGGGGACATTTaGTGGGAGGCATGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGAGDI*WEACPQ
Trigger: CTGAGGACATGCCTCCCACCAAATGTCCCCTGCTCC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCCCAGTGCAGAGCGTaGGGTGACAGGAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHPQCRA*GDRSGT
Trigger: AGTCCCACTCCTGTCACCCCACGCTCTGCACTGGGG...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTCCCGACTCCACGAGGTaGTTCCTTCTGCTATTCCAG +
Preference number: 4 (lower is better)
Translates to: RRQQESHDHAALAEVARSPDSTR*FLLLFQ
Trigger: CTGGAATAGCAGAAGGAACCACCTCGTGGAGTCGGG...ACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR TCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGGGGTTCCTCCACAAATaGGCTAAAGTCCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRGFLHK*AKVHKG
Trigger: TCCTTTGTGGACTTTAGCTCATTTGTGGAGGAACCC...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAACCCCCAGGAAGACCTaGAGTCCTGCTGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVTPRKT*SPAVLE
Trigger: CTCCAGGACAGCAGGACTTCAGGTCTTCCTGGGGGT...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAGAAGCAGAGCAACAATaGCACAGCACGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTEAEQQ*HSTDVG
Trigger: TCCCACATCCGTGCTGTGTCATTGTTGCTCTGCTTC...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACGGCTCTGGTTAGCGTaGCTTAGCCCACGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTRLWLA*LSPRQN
Trigger: ATTCTGCCGTGGGCTAAGGCACGCTAACCAGAGCCG...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACATTATCTCGGATCTGCTaGCGGACCTTCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTLSRIC*RTFSRS
Trigger: GGAGCGGGAGAAGGTCCGGCAGCAGATCCGAGATAA...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGTGCCACGCATTATCATaGATGCATGGATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQECHALS*MHGYSF
Trigger: GAAACTGTATCCATGCATGCATGATAATGCGTGGCA...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCCCTGTTGCAGTCTCTaGCACGCATTATCATGCATG +
Preference number: 4 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWPCCSL*HALSCM
Trigger: CATGCATGATAATGCGTGGCAGAGACTGCAACAGGG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGAGCTGTCGAGGCCCTaGTCCCCAAAGAAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLELSRP*SPKKGQ
Trigger: CTGTCCCTTCTTTGGGGAGCAGGGCCTCGACAGCTC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCTCCACAGCCAGGTCTaGATCAGTAATGATAGTCAT +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLLHSQV*ISNDSH
Trigger: ATGACTATCATTACTGATGCAGACCTGGCTGTGGAG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTTGCCCCATTTGTATGTaGACACTCATTGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSCPICM*TLIALP
Trigger: TGGGAGGGCAATGAGTGTGCACATACAAATGGGGCA...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCCTGACCTGTCACTGGTaGCCAGCCCAGGGCGATCCA +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLLTCHW*PAQGDP
Trigger: TGGATCGCCCTGGGCTGGGCACCAGTGACAGGTCAG...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACACAGGTCTGGAGGAGTACCCTaGACAGCTTTGCAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: KETSRQQGCEAAPHHRHRSGGVP*TALQLR
Trigger: CCTTAACTGCAAAGCTGTGCAGGGTACTCCTCCAGA...CCTGTGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTTCTGGAGGAGTACCCTaGACAGCTTTGCAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSSGGVP*TALQLR
Trigger: CCTTAACTGCAAAGCTGTGCAGGGTACTCCTCCAGA...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTATAGGGGATCTGGGCTaGAATACTTCTGTATCCTCC +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCIGDLG*NTSVSS
Trigger: GGAGGATACAGAAGTATTGCAGCCCAGATCCCCTAT...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCGAGGTGGTTCCTTCTaGTATTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHRGGSF*YSSSRR
Trigger: GCGGCGGGAGCTGGAATAGCAGAAGGAACCACCTCG...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCCCATGCGCGCGTGCTTaGCCTTACGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLPCARA*PYAPPP
Trigger: AGGAGGAGGAGCGTAAGGCCAAGCACGCGCGCATGG...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCATTACTTTGGCTGGCTaGGGACAGTGGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSITLAG*GQWSSW
Trigger: CCAGGAGGACCACTGTCCCCAGCCAGCCAAAGTAAT...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCACCATCGCTACCCGATaGCTCCAAGTGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSTIATR*LQVFSG
Trigger: CCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGT...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTACGCCTTCTGTCAAGTaGGAATTGGCTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCTPSVK*ELASHQ
Trigger: TTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGT...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGCCAACTGTGACCAGTaGTCTCAGGGCTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVANCDQ*SQGWEG
Trigger: CCCTTCCCAGCCCTGAGACCACTGGTCACAGTTGGC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGTCTCCCGTTGGAGGTaGCCAACTGTGACCAGTGGT +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTVSRWR*PTVTSG
Trigger: ACCACTGGTCACAGTTGGCCACCTCCAACGGGAGAC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGGCCCTGCCTGTCTCTaGCCCAGGACCCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSGPACL*PRTPGF
Trigger: AAACCCTGGGGTCCTGGGCCAGAGACAGGCAGGGCC...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAGAAGTCCTGCTGTCCTaGAGCAGAATAGAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTEVLLS*SRIEGS
Trigger: AGACCCCTCTATTCTGCTCCAGGACAGCAGGACTTC...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGGTTAAGGACACCTTCTaGGAGCTTCTGGATTTGGAG +
Preference number: 4 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQVKDTF*ELLDLE
Trigger: CTCCAAATCCAGAAGCTCCCAGAAGGTGTCCTTAAC...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGCGATCCTGTTACACACACCTGGGATaGTGTCTCGACTTCCTGATT +
Preference number: 4 (lower is better)
Translates to: HCPPIQWVTHTSPPRRSCYTHLG*CLDFLI
Trigger: AATCAGGAAGTCGAGACACCATCCCAGGTGTGTGTA...ACAGGATCGCCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCACCCACGGGGGCAGGATaGTCCATCTCACCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSPTGAG*SISPGS
Trigger: AGACCCCGGTGAGATGGACCATCCTGCCCCCGTGGG...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGACACAGCACGGATGTaGGAAAGGGGATCCCCCACG +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLDTARM*ERGSPT
Trigger: CGTGGGGGATCCCCTTTCCCACATCCGTGCTGTGTC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGGGAGCAACAGCCATaGCTTTTGGTCAGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGEQQP*LLVRFR
Trigger: CCTGAACCTGACCAAAAGCCATGGCTGTTGCTCCCC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 72 bp CTGGTACTCTCTGTGTCCTTGCATCACTGTCGAGGTTaGAAGGTCCCTGTCAAGTGGCAGAGGGGGACCTCT +
Preference number: 4 (lower is better)
Translates to: LVLSVSLHHCRG*KVPVKWQRGTS
Trigger: AGAGGTCCCCCTCTGCCACTTGACAGGGACCTTCAAACCTCGACAGTGATGCAAGGACACAGAGAGTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCAAAGCTTTGATAATTTaGGTGGGGGACAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLKALII*VGDKCQ
Trigger: CTGGCATTTGTCCCCCACTCAAATTATCAAAGCTTT...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGAAGCAGAGCAACAATaGCACAGCACGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSEAEQQ*HSTDVG
Trigger: TCCCACATCCGTGCTGTGTCATTGTTGCTCTGCTTC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCTGGCTTGGGAAGATGTaGCAACCTGGCGGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLWLGKM*QPGGPC
Trigger: GCAGGGACCGCCAGGTTGTCACATCTTCCCAAGCCA...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCGGCTCTGGTTAGCGTaGCTTAGCCCACGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHRLWLA*LSPRQN
Trigger: ATTCTGCCGTGGGCTAAGGCACGCTAACCAGAGCCG...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGCCCCTCCAAGGGCCTaGTTCATGACGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLAPPRA*FMTKSM
Trigger: CATGGACTTCGTCATGAAGCAGGCCCTTGGAGGGGC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGCTCCACAGCCAGGTCTaGATCAGTAATGATAGTCAT +
Preference number: 4 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQLHSQV*ISNDSH
Trigger: ATGACTATCATTACTGATGCAGACCTGGCTGTGGAG...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACCCTTGTGTGTTGTGTaGGTGCTGAATTCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTPLCVV*VLNSGA
Trigger: GGCCCCAGAATTCAGCACGCACACAACACACAAGGG...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCACAACCTGGCGGTCCCTaGAACCGTCTGAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSQPGGP*NRLSHC
Trigger: GCAGTGGCTCAGACGGTTGCAGGGACCGCCAGGTTG...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCCTCTAAACACGAGATaGATAGCACACACATATGAC +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLPLNTR*IAHTYD
Trigger: GTCATATGTGTGTGCTATCCATCTCGTGTTTAGAGG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGCCCCGATCCCACTCTaGGAATACAGAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLAPIPL*EYRGTA
Trigger: TGCAGTCCCTCTGTATTCCCAGAGTGGGATCGGGGC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACTAAACCAGCCATCCTaGAGGGCAGGCATCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLLNQPS*RAGIRV
Trigger: CACCCTGATGCCTGCCCTCCAGGATGGCTGGTTTAG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCGCAGGGGACATTTGGTaGGAGGCATGTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLAGDIW*EACPQA
Trigger: GGCCTGAGGACATGCCTCCCACCAAATGTCCCCTGC...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 72 bp GAGATGAATGGATGGACGCCTTCTGTCAAGTGGGAATaGGCTTCTCACCAAAGGCTTGGGGCTTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EMNGWTPSVKWE*ASHQRLGALAR
Trigger: CCTGGCCAAAGCCCCAAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGTCCATCCATTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 72 bp ATGCCAGTCCCAGACGTCCCAGAGGAGAGTTTGTCCTaGGCCAATGAGATGAATGGATGGACGCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: MPVPDVPEESLS*ANEMNGWTPSV
Trigger: GACAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGTCTGGGACTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 72 bp GGACAAATGCCAGTCCCAGACGTCCCAGAGGAGAGTTaGTCCTTGGCCAATGAGATGAATGGATGGACGCCT +
Preference number: 4 (lower is better)
Translates to: GQMPVPDVPEES*SLANEMNGWTP
Trigger: AGGCGTCCATCCATTCATCTCATTGGCCAAGGACAAACTCTCCTCTGGGACGTCTGGGACTGGCATTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
3UTR CAA 72 bp ACTGGGTTCTCTTGCTCATCTGAAGCACCCTGCGCCTaGGTCTCTGCTACCTATCTGGTACTCTCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: TGFSCSSEAPCA*VSATYLVLSVS
Trigger: GGACACAGAGAGTACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAACCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACCTTGGCCAATGAGATaGATGGATGGACGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTPWPMR*MDGRLL
Trigger: CAGAAGGCGTCCATCCATTCATCTCATTGGCCAAGG...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGTATGCATATGATCTCTaGACACACAATCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRYAYDL*THNPCC
Trigger: GCAACAGGGATTGTGTGTTCAGAGATCATATGCATA...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACAGCATCAGGGTGGGGCTaGAAGCCCCGATCCCACTCT +
Preference number: 4 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTASGWG*KPRSHS
Trigger: AGAGTGGGATCGGGGCTTTCAGCCCCACCCTGATGC...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACATCCTGGGCCCTTCCCTaGGAGCACACACGCTCACCT +
Preference number: 4 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTSWALP*EHTRSP
Trigger: AGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGGA...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTACATGTTTGGAGATCCTaGCCTGTCACTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVHVWRS*PVTGAQ
Trigger: CTGGGCACCAGTGACAGGTCAGGATCTCCAAACATG...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACCACCCAGGCAGTTCTaGCCTGAAGTTCGAGGACTT +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLPPRQF*PEVRGL
Trigger: AAGTCCTCGAACTTCAGGGCAGAACTGCCTGGGTGG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTATACTTATCTCGGATCTaGTGCCGGACCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLYLSRI*CRTFSR
Trigger: GCGGGAGAAGGTCCGGCAGCAGATCCGAGATAAGTA...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAGCCAGGCCACTCAGTaGCCCTGCCCTGACCTGGGG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKASQATQ*PCPDLG
Trigger: CCCCAGGTCAGGGCAGGGGCACTGAGTGGCCTGGCT...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCACACACAATCCCTGTTaGAGTCTCTGCCACGCATTA +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSTHNPC*SLCHAL
Trigger: TAATGCGTGGCAGAGACTGCAACAGGGATTGTGTGT...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCGCTGCCTGGGTCCATTaGAGTGGGATTCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLAAWVH*SGILRT
Trigger: GGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGC...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCTTGGAGCCAGGTGTGTaGCAGGCAGAAATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RILPLPEQLSRILCTTCSLEPGV*QAEIFS
Trigger: GGAGAAAATTTCTGCCTGGCACACACCTGGCTCCAA...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACACTGACCTGTCACTGGTaGCCAGCCCAGGGCGATCCA +
Preference number: 4 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTLTCHW*PAQGDP
Trigger: TGGATCGCCCTGGGCTGGGCACCAGTGACAGGTCAG...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTACAAAGGTCAGCATGCTaGGCAGGGCTGGAATGTGTC +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVQRSAC*AGLECV
Trigger: GACACATTCCAGCCCTGCCCAGCATGCTGACCTTTG...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCATGGACAGGACGGGGTaGGGAGAGGGGTGGATAGGA +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVMDRTG*GEGWIG
Trigger: TCCTATCCACCCCTCTCCCCACCCCGTCCTGTCCAT...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTGGGACCGTGGGGCCCTaGAAGCGCATGGACAGGACG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAGTVGP*KRMDRT
Trigger: CGTCCTGTCCATGCGCTTCCAGGGCCCCACGGTCCC...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACTGCAGAATGCAAACTaGGGCCAATGGGAACAAGGG +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTLQNAN*GQWEQG
Trigger: CCCTTGTTCCCATTGGCCCCAGTTTGCATTCTGCAG...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTATGGCTTTACCTATTaGAAACGGACAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLYGFTY*KRTEKT
Trigger: TGTCTTCTCTGTCCGTTTCCAATAGGTAAAGCCATA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCAGAGGGACTGCACTGTaGAGAACACCAGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVRGTAL*RTPGQP
Trigger: GGGCTGCCCTGGTGTTCTCCACAGTGCAGTCCCTCT...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGGGAGCTTCTGGATTTaGAGGGGAGGACGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHGSFWI*RGGRPC
Trigger: ACATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACTTCCTGATTCCATCTaGAGGAGTACCCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTLPDSI*RSTLHS
Trigger: GCTGTGCAGGGTACTCCTCCAGATGGAATCAGGAAG...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACATACACACACCTGGGATaGTGTCTCGACTTCCTGATT +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTYTHLG*CLDFLI
Trigger: AATCAGGAAGTCGAGACACCATCCCAGGTGTGTGTA...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGACACAGCACGGATGTaGGAAAGGGGATCCCCCACG +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSDTARM*ERGSPT
Trigger: CGTGGGGGATCCCCTTTCCCACATCCGTGCTGTGTC...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACAACCCCCAGGAAGACCTaGAGTCCTGCTGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTTPRKT*SPAVLE
Trigger: CTCCAGGACAGCAGGACTTCAGGTCTTCCTGGGGGT...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGTCACCCATCTACAAATaGTTGCTCCTTCCTATTTTC +
Preference number: 4 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRSPIYK*LLLPIF
Trigger: GAAAATAGGAAGGAGCAATCATTTGTAGATGGGTGA...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTTACGCTCCTCCTCCTaGTGCCGCAGCGCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKALRSSS*CRSASC
Trigger: GCAGGAGGCGCTGCGGCAGCAGGAGGAGGAGCGTAA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGGAATACAGAGGGACTaGACTGTGGAGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVGIQRD*TVENTR
Trigger: CCTGGTGTTCTCCACAGTGCAGTCCCTCTGTATTCC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTATATGTGCACACTCATTaGCCTCCCATCCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLYVHTH*PPIQWV
Trigger: GACCCACTGGATGGGAGGGCAATGAGTGTGCACATA...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGAAATCAAGGAGACATaGGAGAGTTCCCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHEIKET*ESSHPG
Trigger: GCCTGGGTGGGAACTCTCCCATGTCTCCTTGATTTC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACAACCACACCTTCCTGTTaGAGGCTGCAGCTCCTCCGC +
Preference number: 4 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTTTPSC*RLQLLR
Trigger: GCGGAGGAGCTGCAGCCTCCAACAGGAAGGTGTGGT...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCTGCAGGTGGATACCCTaGGATGAAGGGAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLCRWIP*DEGRCE
Trigger: CTCACACCTCCCTTCATCCCAGGGTATCCACCTGCA...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCATTACTTTGGCTGGCTaGGGACAGTGGTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLITLAG*GQWSSW
Trigger: CCAGGAGGACCACTGTCCCCAGCCAGCCAAAGTAAT...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCGCAAACTGGGGCCAATaGGAACAAGGGCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVANWGQ*EQGLQG
Trigger: CCCCTGAAGCCCTTGTTCCCATTGGCCCCAGTTTGC...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGCAAACTGGGGCCAATaGGAACAAGGGCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSANWGQ*EQGLQG
Trigger: CCCCTGAAGCCCTTGTTCCCATTGGCCCCAGTTTGC...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACTGCAGAATGCAAACTaGGGCCAATGGGAACAAGGG +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLLQNAN*GQWEQG
Trigger: CCCTTGTTCCCATTGGCCCCAGTTTGCATTCTGCAG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTACCAGGGGACTTTTCTaGTTCCCTAAACATATGGAT +
Preference number: 4 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSTRGLF*FPKHMD
Trigger: ATCCATATGTTTAGGGAACCAGAAAAGTCCCCTGGT...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCACTTGGCAGTGGTTaGAGCCAGGTGTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVSLGSG*SQVCAR
Trigger: CCTGGCACACACCTGGCTCCAACCACTGCCAAGTGA...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCGGGAGCTTCTGGATTTaGAGGGGAGGACGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLGSFWI*RGGRPC
Trigger: ACATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCC...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTCCCACGGGGGCAGGATaGTCCATCTCACCGGGGTCT +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAPTGAG*SISPGS
Trigger: AGACCCCGGTGAGATGGACCATCCTGCCCCCGTGGG...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCAAAGCTTTGATAATTTaGGTGGGGGACAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSKALII*VGDKCQ
Trigger: CTGGCATTTGTCCCCCACTCAAATTATCAAAGCTTT...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACGGCTTCCTGGGGCGCTaGCTGGGTCCATTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANGFLGR*LGPLQW
Trigger: CCACTGCAATGGACCCAGGCAGCGCCCCAGGAAGCC...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATATTCTGTGCACTACGTaGTCCACACAGACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHILCTT*STQTGS
Trigger: AGAGCCTGTCTGTGTGGAGCACGTAGTGCACAGAAT...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATTGCCCCATTTGTATGTaGACACTCATTGCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHCPICM*TLIALP
Trigger: TGGGAGGGCAATGAGTGTGCACATACAAATGGGGCA...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACTTTTTCAAGCTACTTaGGAGTGGGGTGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLLFQAT*EWGAGG
Trigger: TCCACCTGCACCCCACTCCCAAGTAGCTTGAAAAAG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACAAAAGGCTTGGGGCTTTaGCCAGGAAGCGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTKGLGL*PGSVLL
Trigger: CAGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTT...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCACAGTGGTCTCAGGGCTaGGAAGGGACATCTTACCCA +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSQWSQG*EGTSYP
Trigger: TGGGTAAGATGTCCCTTCCCAGCCCTGAGACCACTG...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACATCTCTGCTACCTATCTaGTACTCTCTGTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTSLLPI*YSLCPC
Trigger: GCAAGGACACAGAGAGTACCAGATAGGTAGCAGAGA...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTCCCTCCGGCCCACCTaGGGTATCTGGTTCGACTGG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKASLRPT*GIWFDW
Trigger: CCAGTCGAACCAGATACCCCAGGTGGGCCGGAGGGA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCCTTCCTGATTCCATCTaGAGGAGTACCCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLLPDSI*RSTLHS
Trigger: GCTGTGCAGGGTACTCCTCCAGATGGAATCAGGAAG...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTATCTCTTACACACACCTaGGATGGTGTCTCGACTTCC +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVSLTHT*DGVSTS
Trigger: GGAAGTCGAGACACCATCCCAGGTGTGTGTAAGAGA...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTCCCCAGTGCAGAGCGTaGGGTGACAGGAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAPQCRA*GDRSGT
Trigger: AGTCCCACTCCTGTCACCCCACGCTCTGCACTGGGG...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCGAAGATGTGACAACCTaGCGGTCCCTGCAACCGTCT +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVEDVTT*RSLQPS
Trigger: AGACGGTTGCAGGGACCGCCAGGTTGTCACATCTTC...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS-3UTR TCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCATGGCTTGGGAAGATGTaGCAACCTTTGCTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSWLGKM*QPLLPG
Trigger: GCCAGGAAGCAAAGGTTGTCACATCTTCCCAAGCCA...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR TCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACCAAGGGCCTGCTTCATaGCGAAGTCCATGCCGCCGG +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANQGPAS*RSPCRR
Trigger: CCGGCGGCATGGACTTCGTCATGAAGCAGGCCCTTG...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTGCCCACGGCAGAATTTaGATGCAGCGCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAAHGRI*MQRSWL
Trigger: CAGCCAGGAGCGCTGCATGCAAATTCTGCCGTGGGC...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCCTGCGCCTTGGTCTCTaGTACCTATCTGGTACTCTC +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVLRLGL*YLSGTL
Trigger: GAGAGTACCAGATAGGTAGCAGAGACCAAGGCGCAG...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGGAATACAGAGGGACTaGACTGTGGAGAACACCAGG +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSGIQRD*TVENTR
Trigger: CCTGGTGTTCTCCACAGTGCAGTCCCTCTGTATTCC...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCATATGTGCACACTCATTaGCCTCCCATCCAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSYVHTH*PPIQWV
Trigger: GACCCACTGGATGGGAGGGCAATGAGTGTGCACATA...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAAGAAGTAGTAACAGGTaGAGTAGGCTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSRSSNR*SRLGQE
Trigger: CTCCTGCCCCAGCCTACTCCACCTGTTACTACTTCT...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTGTCATTACTTTGGCTaGCTGGGGACAGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVCHYFG*LGTVVL
Trigger: GAGGACCACTGTCCCCAGCCAGCCAAAGTAATGACA...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAAATGTGTCATTACTTTaGCTGGCTGGGGACAGTGGT +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVNVSLL*LAGDSG
Trigger: ACCACTGTCCCCAGCCAGCCAAAGTAATGACACATT...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCCATGCTGGGCAGGGCTaGAATGTGTCATTACTTTGG +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLHAGQG*NVSLLW
Trigger: CCAAAGTAATGACACATTCCAGCCCTGCCCAGCATG...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACATATGGCTTTACCTATTaGAAACGGACAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTYGFTY*KRTEKT
Trigger: TGTCTTCTCTGTCCGTTTCCAATAGGTAAAGCCATA...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGTTAAGGACACCTTCTaGGAGCTTCTGGATTTGGAG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVVKDTF*ELLDLE
Trigger: CTCCAAATCCAGAAGCTCCCAGAAGGTGTCCTTAAC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCTCTCTTACACACACCTaGGATGGTGTCTCGACTTCC +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLSLTHT*DGVSTS
Trigger: GGAAGTCGAGACACCATCCCAGGTGTGTGTAAGAGA...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTGGCACCTTCAGTCGCTaGGCAGAGCAGATAGCATGG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAGTFSR*AEQIAW
Trigger: CCATGCTATCTGCTCTGCTCAGCGACTGAAGGTGCC...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR GCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCAGATGTGACAACCTTTaGTTCCTGGCAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVRCDNL*FLAELG
Trigger: TCCCAGCTCTGCCAGGAAGCAAAGGTTGTCACATCT...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR GCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCACCCTGTTGCAGTCTCTaGCACGCATTATCATGCATG +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSPCCSL*HALSCM
Trigger: CATGCATGATAATGCGTGGCAGAGACTGCAACAGGG...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTGGGCCACACATTAGCTaGTCTCCACAGCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAGPHIS*SPQPGL
Trigger: CAGACCTGGCTGTGGAGAGCAGCTAATGTGTGGCCC...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTACCTAAGTGTGTTGCATaGACACTGCCCCATTTGTAT +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLPKCVA*TLPHLY
Trigger: ATACAAATGGGGCAGTGTGCATGCAACACACTTAGG...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTGGAATGGGGGCAGCTTaGCCACACCAATGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAGMGAA*PHQWRC
Trigger: ACACCTCCATTGGTGTGGCCAAGCTGCCCCCATTCC...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCACGCCTTCTGTCAAGTaGGAATTGGCTTCTCACCAA +
Preference number: 4 (lower is better)
Translates to: VAVSATHYHACMDTVSSLTPSVK*ELASHQ
Trigger: TTGGTGAGAAGCCAATTCCCACTTGACAGAAGGCGT...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACTCCTGGGGCGCTGCCTaGGTCCATTGCAGTGGGATT +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANSWGAA*VHCSGI
Trigger: AATCCCACTGCAATGGACCCAGGCAGCGCCCCAGGA...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTGCCCTCCCATCCAGTaGGTCACACACACCTCACCT +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKACPPIQ*VTHTSP
Trigger: AGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTATATGCATATGATCTCTaGACACACAATCCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVYAYDL*THNPCC
Trigger: GCAACAGGGATTGTGTGTTCAGAGATCATATGCATA...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAGAGGGGGACCTCTCTaGACACTTGTGTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKARGGPL*TLVSKW
Trigger: CCACTTGGACACAAGTGTTCAGAGAGGTCCCCCTCT...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACGTGTTGTGTGCGTGCTaGATTCTGGGGCCACTCCTC +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANVLCAC*ILGPLL
Trigger: GAGGAGTGGCCCCAGAATTCAGCACGCACACAACAC...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAACGCATTATCATGCATaGATGGATACAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLTHYHA*MDTVSS
Trigger: GGAGGAAACTGTATCCATGCATGCATGATAATGCGT...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCAGACCCCCAAACATaGACACAGCAGCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVSDPQT*TQQPSN
Trigger: ATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGA...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTCATCTGAAGCACCCTaGGCCTTGGTCTCTGCTACC +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKASSEAP*ALVSAT
Trigger: GGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGTGTTGCATGCACACTaGCCCATTTGTATGTGCACA +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSVLHAH*PICMCT
Trigger: TGTGCACATACAAATGGGGCAGTGTGCATGCAACAC...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTCCACAGCCGCCTTTTTaGTTCTCTCTGGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAPQPPF*FSLAAP
Trigger: AGGAGCTGCCAGAGAGAAGCAAAAAGGCGGCTGTGG...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACGGAATGGGGGCAGCTTaGCCACACCAATGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANGMGAA*PHQWRC
Trigger: ACACCTCCATTGGTGTGGCCAAGCTGCCCCCATTCC...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTTCTCACCAAAGGCTTaGGGCTTTGGCCAGGAAGCG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAFSPKA*GFGQEA
Trigger: CGCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCTCTAAACACGAGATaGATAGCACACACATATGAC +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHPLNTR*IAHTYD
Trigger: GTCATATGTGTGTGCTATCCATCTCGTGTTTAGAGG...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTCAGTGGTCTCAGGGCTaGGAAGGGACATCTTACCCA +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAQWSQG*EGTSYP
Trigger: TGGGTAAGATGTCCCTTCCCAGCCCTGAGACCACTG...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAACCAGGGGACTTTTCTaGTTCCCTAAACATATGGAT +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVTRGLF*FPKHMD
Trigger: ATCCATATGTTTAGGGAACCAGAAAAGTCCCCTGGT...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACAGGGTTCCTCCACAAATaGGCTAAAGTCCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTGFLHK*AKVHKG
Trigger: TCCTTTGTGGACTTTAGCTCATTTGTGGAGGAACCC...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCTACACATATGCATATaGTCTCTGAACACACAATCC +
Preference number: 4 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHLHICI*SLNTQS
Trigger: GGATTGTGTGTTCAGAGATCATATGCATATGTGTAG...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGTATTGCAGTCTAACTaGTATGGCTTTACCTATTGG +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVVLQSN*YGFTYW
Trigger: CCAATAGGTAAAGCCATATCAGTTAGACTGCAATAC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTATCACTGTCGAGGTTTaGAGGTCCCTGTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAITVEV*RSLSSG
Trigger: GCCACTTGACAGGGACCTTCAAACCTCGACAGTGAT...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACTACTTATCTCGGATCTaGTGCCGGACCTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANYLSRI*CRTFSR
Trigger: GCGGGAGAAGGTCCGGCAGCAGATCCGAGATAAGTA...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACCCCCAAACATGCACACAGCAGCCTTCAAATGTCTCTGAATTCTCTCAAACAGTGTTGCATGCACACTaGCCCATTTGTATGTGCACA +
Preference number: 4 (lower is better)
Translates to: DPQTCTQQPSNVSEFSQTVLHAH*PICMCT
Trigger: TGTGCACATACAAATGGGGCAGTGTGCATGCAACAC...TGTTTGAGAGAATTCAGAGACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCTTT +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKALAGLA*EDVTTF
Trigger: AAAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAG...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTACCATCGCTACCCGATaGCTCCAAGTGTTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKATIATR*LQVFSG
Trigger: CCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGT...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACAAGCACCCTGCGCCTTaGTCTCTGCTACCTATCTGG +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANKHPAP*SLLPIW
Trigger: CCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTT...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTCTCTCACGTATTCTGTaGACTACGTGCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKALSRIL*TTCSTQ
Trigger: CTGTGTGGAGCACGTAGTGCACAGAATACGTGAGAG...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGGTTCCCTAAACATATaGATTGTTTTGTCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: FSCSSEAPCALVSATYLVGSLNI*IVLSRV
Trigger: AACACGAGACAAAACAATCCATATGTTTAGGGAACC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCGTATTGCAGTCTAACTaGTATGGCTTTACCTATTGG +
Preference number: 4 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVVLQSN*YGFTYW
Trigger: CCAATAGGTAAAGCCATATCAGTTAGACTGCAATAC...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCATCACCCATCTACAAATaGTTGCTCCTTCCTATTTTC +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSSPIYK*LLLPIF
Trigger: GAAAATAGGAAGGAGCAATCATTTGTAGATGGGTGA...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACTTGGAGCCAGGTGTGTaGCAGGCAGAAATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANLEPGV*QAEIFS
Trigger: GGAGAAAATTTCTGCCTGGCACACACCTGGCTCCAA...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACATTCTGTGCACTACGTaGTCCACACAGACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANILCTT*STQTGS
Trigger: AGAGCCTGTCTGTGTGGAGCACGTAGTGCACAGAAT...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTCTCTGCTACCTATCTaGTACTCTCTGTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKASLLPI*YSLCPC
Trigger: GCAAGGACACAGAGAGTACCAGATAGGTAGCAGAGA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACCTAAGAGTGATCACTTaGCAGTGGTTGGAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANLRVIT*QWLEPG
Trigger: ACCTGGCTCCAACCACTGCCAAGTGATCACTCTTAG...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAGGTTCCCTAAACATATaGATTGTTTTGTCTCGTGTT +
Preference number: 4 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSGSLNI*IVLSRV
Trigger: AACACGAGACAAAACAATCCATATGTTTAGGGAACC...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTACGCATTATCATGCATaGATGGATACAGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKATHYHA*MDTVSS
Trigger: GGAGGAAACTGTATCCATGCATGCATGATAATGCGT...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTGCCACGCATTATCATaGATGCATGGATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKACHALS*MHGYSF
Trigger: GAAACTGTATCCATGCATGCATGATAATGCGTGGCA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR GCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACCCTAAGTGTGTTGCATaGACACTGCCCCATTTGTAT +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANPKCVA*TLPHLY
Trigger: ATACAAATGGGGCAGTGTGCATGCAACACACTTAGG...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CCA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACAATGAGATGAATGGATaGACGCCTTCTGTCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TISTQIHHLNQAHIHKANNEMNG*TPSVKW
Trigger: CCACTTGACAGAAGGCGTCCATCCATTCATCTCATT...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR TCA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTCTACACATATGCATATaGTCTCTGAACACACAATCC +
Preference number: 4 (lower is better)
Translates to: DTISTQIHHLNQAHIHKALHICI*SLNTQS
Trigger: GGATTGTGTGTTCAGAGATCATATGCATATGTGTAG...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS CCA 90 bp TTCTCTGGGTTCAGACTTGAGTCTCCGCCGCAGCCGGGGCGGTCCTaGCTCCGGGACCCCGGCCGTTCGGGCTCTGCCCGGAGTCTCCGG +
Preference number: 5 (lower is better)
Translates to: FSGFRLESPPQPGRS*LRDPGRSGSARSLR
Trigger: CCGGAGACTCCGGGCAGAGCCCGAACGGCCGGGGTCCCGGAGCCAGGACCGCCCCGGCTGCGGCGGAGACTCAAGTCTGAACCCAGAGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514150.5
CDS GCA 90 bp GAGCCACTGCAGGGCTCCGGCCCGACTCCACGAGGTGGTTCCTTCTaGTATTCCAGCTCCCGCCGCCGCGTGCAATTCCGCCAGGCGAGC +
Preference number: 5 (lower is better)
Translates to: EPLQGSGPTPRGGSF*YSSSRRRVQFRQAS
Trigger: GCTCGCCTGGCGGAATTGCACGCGGCGGCGGGAGCTGGAATAGCAGAAGGAACCACCTCGTGGAGTCGGGCCGGAGCCCTGCAGTGGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393745.8
ENST00000512824.5
CDS GCA 90 bp AGGTGGCCAGGAGTGCCTCCCAAGCCTCAGTCCTTATCTCGGATCTaGTGCCGGACCTTCTCCCGCTCCGCCTCCATGCGCGCGTGCTTG +
Preference number: 5 (lower is better)
Translates to: RWPGVPPKPQSLSRI*CRTFSRSASMRACL
Trigger: CAAGCACGCGCGCATGGAGGCGGAGCGGGAGAAGGTCCGGCAGCAGATCCGAGATAAGGACTGAGGCTTGGGAGGCACTCCTGGCCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CAA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGCCCTCCCCCTCTTCCTaGACTCCTCCGCCGAGGCGC +
Preference number: 5 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQPSPSS*TPPPRR
Trigger: GCGCCTCGGCGGAGGAGTCAAGGAAGAGGGGGAGGG...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CAA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGTGTGGGGTGGCTGCTTaGCCCACCAGCTGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQECGVAA*PTSCPP
Trigger: AGGGGGACAGCTGGTGGGCAAAGCAGCCACCCCACA...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS GCA 90 bp CATGGCAGGGACCACACCTTCCCAGGGAACTTGCCACTTGCAGCCTaGCCGGCTCATCAGGTGGAGGCTGGCCAACCAGGTGAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: HGRDHTFPGNLPLAA*PAHQVEAGQPGEGG
Trigger: ACCTCCCTCACCTGGTTGGCCAGCCTCCACCTGATGAGCCGGGCAGGCTGCAAGTGGCAAGTTCCCTGGGAAGGTGTGGTCCCTGCCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515502.1
CDS-3UTR CAA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTCAAAGGCTTGGGGCTTaGGCCAGGAAGCGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPQRLGA*ARKRPP
Trigger: AGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTTG...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTGTGGGGTGGCTGCTTaGCCCACCAGCTGTCCCCCT +
Preference number: 5 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLCGVAA*PTSCPP
Trigger: AGGGGGACAGCTGGTGGGCAAAGCAGCCACCCCACA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGAGCCCACGGCAGAATTaGCATGCAGCGCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQESPRQN*HAALLA
Trigger: AGCCAGGAGCGCTGCATGCAAATTCTGCCGTGGGCT...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGCAAAGGCTTGGGGCTTaGGCCAGGAAGCGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEQRLGA*ARKRPP
Trigger: AGGAGGACGCTTCCTGGCCAAAGCCCCAAGCCTTTG...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTATCACTTGGCAGTGGTaGGAGCCAGGTGTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPITWQW*EPGVCQ
Trigger: CTGGCACACACCTGGCTCCAACCACTGCCAAGTGAT...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS TCA 90 bp GGGGCTGGCGGCGGAGATGAGAGAGGACGCCAGCAGAGGTGGCAGTaGAATCAAGGAGACATGGGAGAGTTCCCACCCAGGCAGTTCTGC +
Preference number: 5 (lower is better)
Translates to: GAGGGDERGRQQRWQ*NQGDMGEFPPRQFC
Trigger: GCAGAACTGCCTGGGTGGGAACTCTCCCATGTCTCCTTGATTTCACTGCCACCTCTGCTGGCGTCCTCTCTCATCTCCGCCGCCAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CAA 90 bp CAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCAATCCATGCGCGCGTGCTaGGCCTTACGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QESHDHAALAEVARSASQSMRAC*ALRSSS
Trigger: GGAGGAGGAGCGTAAGGCCAAGCACGCGCGCATGGA...TTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS-3UTR CAA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTCCTTTTTCAAGCTACTaGGGAGTGGGGTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPPFSSY*GVGCRW
Trigger: CCACCTGCACCCCACTCCCAAGTAGCTTGAAAAAGG...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGGCCTGGCAGCCCCTaGACTGAGCAAGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGPGSP*TEQAGP
Trigger: GGGCCCAGCTTGCTCAGTCAAGGGGCTGCCAGGCCC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTGGAGGACGTCCATGTTaGGAGATCCTGACCTGTCAC +
Preference number: 5 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPGGRPC*EILTCH
Trigger: GTGACAGGTCAGGATCTCCAAACATGGACGTCCTCC...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGTGGAGCAGGGGACATTaGGTGGGAGGCATGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEWSRGH*VGGMSS
Trigger: TGAGGACATGCCTCCCACCAAATGTCCCCTGCTCCA...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCCCTGGCTGGCCTGGCTaGGGAAGATGTGACAACCTT +
Preference number: 5 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLPGWPG*GRCDNL
Trigger: AAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGG...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CAA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGAGCCCACGGCAGAATTaGCATGCAGCGCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRSPRQN*HAALLA
Trigger: AGCCAGGAGCGCTGCATGCAAATTCTGCCGTGGGCT...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CTGGGGCGCTGCCTGGGTCCATTGCAGTGGGATTCTGAGGACCTCAGGCAGGAGCCTCCCCTAAGTGTGTaGCATGCACACTGCCCCATT +
Preference number: 5 (lower is better)
Translates to: LGRCLGPLQWDSEDLRQEPPLSV*HAHCPI
Trigger: AATGGGGCAGTGTGCATGCAACACACTTAGGGGAGG...CTCCTGCCTGAGGTCCTCAGAATCCCACTGCAATGGACCCAGGCAGCGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCTGGGAGCTTCTGGATTaGGAGGGGAGGACGTCCATG +
Preference number: 5 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLWELLD*EGRTSM
Trigger: CATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCCA...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTGGCCAGGAGTGCCTCCCCTGGCTGGCCTGGCTaGGGAAGATGTGACAACCTG +
Preference number: 5 (lower is better)
Translates to: QQESHDHAALAEVARSASPGWPG*GRCDNL
Trigger: CAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGG...GGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS CCA 90 bp AGCCCACGGCAGAATTTGCATGCAGCGCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCTGCTCGAGTCCCCAGTTTCCTCCTCTC +
Preference number: 5 (lower is better)
Translates to: SPRQNLHAALLAGLA*EDVTTCSSPQFPPL
Trigger: GAGAGGAGGAAACTGGGGACTCGAGCAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCAAATTCTGCCGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515094.1
CDS-3UTR CAA 90 bp AGGGGAGGACGTCCATGTTTGGAGATCCTGACCTGTCACTGGTGCCCAGCCCAGTTTGAAGGGACCAGCTaGGCAGGGGCCATGTCTCTC +
Preference number: 5 (lower is better)
Translates to: RGGRPCLEILTCHWCPAQFEGTS*AGAMSL
Trigger: GAGAGACATGGCCCCTGCCAAGCTGGTCCCTTCAAA...CTGGGCTGGGCACCAGTGACAGGTCAGGATCTCCAAACATGGACGTCCTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCTGGGCCCTTCCCTGAGAGCACACACGCTCACCTCACCTGGTGCACGCTCCCTGTACTCTCTGTGTCCTaGCATCACTGTCGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PGPFPESTHAHLTWCTLPVLSVS*HHCRGL
Trigger: CAAACCTCGACAGTGATGCAAGGACACAGAGAGTAC...AGGGAGCGTGCACCAGGTGAGGTGAGCGTGTGTGCTCTCAGGGAAGGGCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCAGCCCGAAGCACCCTGCGCCTaGGTCTCTGCTACCTATCTG +
Preference number: 5 (lower is better)
Translates to: HRPSLPDGSKCFLGAWQPEAPCA*VSATYL
Trigger: CAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTC...GGGCTGCCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCCTGGCTGGCCTGGCTaGGGAAGATGTGACAACCTG +
Preference number: 5 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWPGWPG*GRCDNL
Trigger: CAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393745.8
CDS TCA 90 bp ACCTTTGCTTCCTGGCAGAGCTGGGATGCGGGCACCTTCAGTCGCTaGGCAGAGCAGATAGCATGGCAGGGACCACACCTTCCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: TFASWQSWDAGTFSR*AEQIAWQGPHLPVG
Trigger: TCCAACAGGAAGGTGTGGTCCCTGCCATGCTATCTGCTCTGCTCAGCGACTGAAGGTGCCCGCATCCCAGCTCTGCCAGGAAGCAAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS TCA 90 bp GTCTTTGCTTCCTGGCAGAGCTGGGATGCGGGCACCTTCAGTCGCTaGGCAGAGCAGATAGCATGGCAGGGACCACACCTTCCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: VFASWQSWDAGTFSR*AEQIAWQGPHLPVG
Trigger: TCCAACAGGAAGGTGTGGTCCCTGCCATGCTATCTGCTCTGCTCAGCGACTGAAGGTGCCCGCATCCCAGCTCTGCCAGGAAGCAAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506642.5
CDS TCA 90 bp AACTTTGCTTCCTGGCAGAGCTGGGATGCGGGCACCTTCAGTCGCTaGGCAGAGCAGATAGCATGGCAGGGACCACACCTTCCCAGGGAA +
Preference number: 5 (lower is better)
Translates to: NFASWQSWDAGTFSR*AEQIAWQGPHLPRE
Trigger: TTCCCTGGGAAGGTGTGGTCCCTGCCATGCTATCTGCTCTGCTCAGCGACTGAAGGTGCCCGCATCCCAGCTCTGCCAGGAAGCAAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515502.1
CDS CCA 90 bp AAAGCAACATTCTCTTTGACTTCACAGGGCCGCTCTGTCCCCACCTaGGTCCAGCGTCAGGAAGCCGCTGTGCTCCCCTGCCTGACTTTG +
Preference number: 5 (lower is better)
Translates to: KATFSLTSQGRSVPT*VQRQEAAVLPCLTL
Trigger: CAAAGTCAGGCAGGGGAGCACAGCGGCTTCCTGACGCTGGACCCAGGTGGGGACAGAGCGGCCCTGTGAAGTCAAAGAGAATGTTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509837.5
CDS-3UTR CAA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACATCCATGCGCGCGTGCTaGGCCTTACGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTSMRAC*ALRSSS
Trigger: GGAGGAGGAGCGTAAGGCCAAGCACGCGCGCATGGA...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCTTCTCACCAAAGGCTaGGGGCTTTGGCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWLLTKG*GLWPGS
Trigger: GCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAAG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS CCA 90 bp CAAGGAGACAGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTaGCCAGGAGTGCCTCCCAAGCCTCAGTCCTTATCTCGGATCTGC +
Preference number: 5 (lower is better)
Translates to: QGDSRSLMIMQHWLR*PGVPPKPQSLSRIC
Trigger: GCAGATCCGAGATAAGGACTGAGGCTTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS CCA 90 bp CAACCAGGTGAGGGAGGTGGTCTGGACACGGAAAGCCTTGGGAGCTaGGTTCTGACCCCAGAGCTGACGCTCTGTGTGAATGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: QPGEGGGLDTESLGS*VLTPELTLCVNDLG
Trigger: TCCAAGATCATTCACACAGAGCGTCAGCTCTGGGGTCAGAACCCAGCTCCCAAGGCTTTCCGTGTCCAGACCACCTCCCTCACCTGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515502.1
CDS-3UTR CAA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCAGGAATGGGGGCAGCTaGGCCACACCAATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: RILPLPEQLSRILCTTCSRNGGS*ATPMEV
Trigger: CACCTCCATTGGTGTGGCCAAGCTGCCCCCATTCCT...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp AGGATTCTGCCCCTGCCAGAGCAACTCTCACGTATTCTGTGCACTACGTGCTCCGGACAAGGTCTCCCGTaGGAGGTGGCCAACTGTGAC +
Preference number: 5 (lower is better)
Translates to: RILPLPEQLSRILCTTCSGQGLP*EVANCD
Trigger: GTCACAGTTGGCCACCTCCAACGGGAGACCTTGTCC...GGAGCACGTAGTGCACAGAATACGTGAGAGTTGCTCTGGCAGGGGCAGAATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp ACACAAAGAGACAAGCAGACAACAGGGGTGCGAGGCGGCTCCCCATCACAGACAGACCTCTCTGAACACTaGTGTCCAAGTGGGGCTCGC +
Preference number: 5 (lower is better)
Translates to: TQRDKQTTGVRGGSPSQTDLSEH*CPSGAR
Trigger: GCGAGCCCCACTTGGACACAAGTGTTCAGAGAGGTC...TGTCTGTGATGGGGAGCCGCCTCGCACCCCTGTTGTCTGCTTGTCTCTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CCTGTCACTGGTGCCCAGCCCAGGGCGATCCACAGCCGCCTTTTTGCTTCTCTCGTACTCTCTGTGTCCTaGCATCACTGTCGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: PVTGAQPRAIHSRLFASLVLSVS*HHCRGL
Trigger: CAAACCTCGACAGTGATGCAAGGACACAGAGAGTAC...GAGAGAAGCAAAAAGGCGGCTGTGGATCGCCCTGGGCTGGGCACCAGTGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS CCA 90 bp ATGAGAGAGGACGCCAGCAGAGGTGGCAGTGAAATCAAGGAGACATaGGAGAGTTCCCACCCAGGCAGTTCTGCCCTGAAGTTCGAGGAC +
Preference number: 5 (lower is better)
Translates to: MREDASRGGSEIKET*ESSHPGSSALKFED
Trigger: GTCCTCGAACTTCAGGGCAGAACTGCCTGGGTGGGAACTCTCCCATGTCTCCTTGATTTCACTGCCACCTCTGCTGGCGTCCTCTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CAA 90 bp CCATGGCATAGACCATCGCTACCCGATGGCTCCAAGTGTTTTCTGGGGGCCTGGCCACAAAGGATCCATTaGAAGGGACCAGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: PWHRPSLPDGSKCFLGAWPQRIH*KGPAWQ
Trigger: CTGCCAAGCTGGTCCCTTCAAATGGATCCTTTGTGG...CCAGGCCCCCAGAAAACACTTGGAGCCATCGGGTAGCGATGGTCTATGCCATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGGACAAGGTCTCCCGTaGGAGGTGGCCAACTGTGAC +
Preference number: 5 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTGQGLP*EVANCD
Trigger: GTCACAGTTGGCCACCTCCAACGGGAGACCTTGTCC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp TGCCCACCAGCTGTCCCCCTGATAGGGGATCTGGGCTGCAATACTTCTGTATCCAGGACCCCAGGGTTTTaGAGAATGACCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: CPPAVPLIGDLGCNTSVSRTPGF*RMTILP
Trigger: GGGCAGGATGGTCATTCTCAAAAACCCTGGGGTCCT...GGATACAGAAGTATTGCAGCCCAGATCCCCTATCAGGGGGACAGCTGGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTCATCACTGTCGAGGTTaGAAGGTCCCTGTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSHHCRG*KVPVKW
Trigger: CCACTTGACAGGGACCTTCAAACCTCGACAGTGATG...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS TCA 90 bp GGAAGATGTGACAACCCTGGTTCAGACACCAGGCACCCATCGCTCTaGGGTCAAGACCCAATGCCCTGCTGGAGGAGAAAGGAGATGGAA +
Preference number: 5 (lower is better)
Translates to: GRCDNPGSDTRHPSL*GQDPMPCWRRKEME
Trigger: TTCCATCTCCTTTCTCCTCCAGCAGGGCATTGGGTCTTGACCTCAGAGCGATGGGTGCCTGGTGTCTGAACCAGGGTTGTCACATCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS CCA 90 bp AGCCCACGGCAGAATTTGCATGCAGCGCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCAGCTGTGTGTCTTTAGGCAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: SPRQNLHAALLAGLA*EDVTTSCVSLGKSF
Trigger: AAAGGACTTGCCTAAAGACACACAGCTGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCAAATTCTGCCGTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515502.1
CDS-3UTR CAA 90 bp GTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACACACCTCACCTCCCAGGTCTGTCAAGTGGGAATaGGCTTCTCACCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: VHTHCPPIQWVTHTSPPRSVKWE*ASHQRL
Trigger: AAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGA...CCTGGGAGGTGAGGTGTGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTAACACACAATCCCTGTaGCAGTCTCTGCCACGCATT +
Preference number: 5 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSNTQSL*QSLPRI
Trigger: AATGCGTGGCAGAGACTGCAACAGGGATTGTGTGTT...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACATGGAGCAGGGGACATTaGGTGGGAGGCATGTCCTCA +
Preference number: 5 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTWSRGH*VGGMSS
Trigger: TGAGGACATGCCTCCCACCAAATGTCCCCTGCTCCA...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS CCA 90 bp AGGCAGATCTGGTTTCCAACGCCACCGTCATTTCCTTATTTGCCATaGGACCTTCAGCAAGGCCCTAACCTGCTCGAGTCCCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: RQIWFPTPPSFPYLP*DLQQGPNLLESPVS
Trigger: GGAAACTGGGGACTCGAGCAGGTTAGGGCCTTGCTGAAGGTCCCATGGCAAATAAGGAAATGACGGTGGCGTTGGAAACCAGATCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS-3UTR CAA 90 bp TGCCAGCTGGGTACTAGGGCTATTGGGGCTGGAGGGTCTACCCCACTGTACTCTGAGGAGAGTTTGTCCTaGGCCAATGAGATGAATGGA +
Preference number: 5 (lower is better)
Translates to: CQLGTRAIGAGGSTPLYSEESLS*ANEMNG
Trigger: TCCATTCATCTCATTGGCCAAGGACAAACTCTCCTC...AGAGTACAGTGGGGTAGACCCTCCAGCCCCAATAGCCCTAGTACCCAGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAGAAGCACCCTGCGCCTaGGTCTCTGCTACCTATCTG +
Preference number: 5 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLEAPCA*VSATYL
Trigger: CAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTC...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTACCTTTTTCAAGCTACTaGGGAGTGGGGTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: FSCSSEAPCALVSATYLVPFSSY*GVGCRW
Trigger: CCACCTGCACCCCACTCCCAAGTAGCTTGAAAAAGG...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CACACAACTGTCTTTTCAGACCCCCAAACATGCACACAGCAGCCTTCAAATGTCAGGAATGGGGGCAGCTaGGCCACACCAATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: HTTVFSDPQTCTQQPSNVRNGGS*ATPMEV
Trigger: CACCTCCATTGGTGTGGCCAAGCTGCCCCCATTCCT...GACATTTGAAGGCTGCTGTGTGCATGTTTGGGGGTCTGAAAAGACAGTTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp ACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCAGTGGGTCACACAGTCCCAGAGGAGAGTTaGTCCTTGGCCAATGAGATG +
Preference number: 5 (lower is better)
Translates to: TAPFVCAHSLPSHPVGHTVPEES*SLANEM
Trigger: CATCTCATTGGCCAAGGACAAACTCTCCTCTGGGAC...TGTGTGACCCACTGGATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTACCTAAGAGTGATCACTaGGCAGTGGTTGGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: FSCSSEAPCALVSATYLVPKSDH*AVVGAR
Trigger: CCTGGCTCCAACCACTGCCAAGTGATCACTCTTAGG...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGGAGGACGTCCATGTTaGGAGATCCTGACCTGTCAC +
Preference number: 5 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHGGRPC*EILTCH
Trigger: GTGACAGGTCAGGATCTCCAAACATGGACGTCCTCC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTCCATGCGCGCGTGCTaGGCCTTACGCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: DTISTQIHHLNQAHIHKASMRAC*ALRSSS
Trigger: GGAGGAGGAGCGTAAGGCCAAGCACGCGCGCATGGA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATCCACAAAGGATCCATTaGAAGGGACCAGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHPQRIH*KGPAWQ
Trigger: CTGCCAAGCTGGTCCCTTCAAATGGATCCTTTGTGG...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp GTGTGTTGCATGCACACTGCCCCATTTGTATGTGCACACTCATTGCCCTCCCATGTCCCAGAGGAGAGTTaGTCCTTGGCCAATGAGATG +
Preference number: 5 (lower is better)
Translates to: VCCMHTAPFVCAHSLPSHVPEES*SLANEM
Trigger: CATCTCATTGGCCAAGGACAAACTCTCCTCTGGGAC...ATGGGAGGGCAATGAGTGTGCACATACAAATGGGGCAGTGTGCATGCAACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAAACACACAATCCCTGTaGCAGTCTCTGCCACGCATT +
Preference number: 5 (lower is better)
Translates to: FSCSSEAPCALVSATYLVNTQSL*QSLPRI
Trigger: AATGCGTGGCAGAGACTGCAACAGGGATTGTGTGTT...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp GTTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCCATCACTGTCGAGGTTaGAAGGTCCCTGTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: VAVSATHYHACMDTVSSLHHCRG*KVPVKW
Trigger: CCACTTGACAGGGACCTTCAAACCTCGACAGTGATG...GAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS GCA 90 bp ATGAATTTATTCACCACGCCCATCCAGCTGAGTAGAGATGGAAATTaGTCAGGCTCTGGCAAAGGTCTTGCACAGTACGCCCCGAATCCA +
Preference number: 5 (lower is better)
Translates to: MNLFTTPIQLSRDGN*SGSGKGLAQYAPNP
Trigger: TGGATTCGGGGCGTACTGTGCAAGACCTTTGCCAGAGCCTGAGCAATTTCCATCTCTACTCAGCTGGATGGGCGTGGTGAATAAATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506642.5
CDS-3UTR CAA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACGACCACACCTTCCTGTaGGAGGCTGCAGCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: TISTQIHHLNQAHIHKANDHTFL*EAAAPP
Trigger: CGGAGGAGCTGCAGCCTCCAACAGGAAGGTGTGGTC...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS-3UTR CAA 90 bp TTCTCTTGCTCATCTGAAGCACCCTGCGCCTTGGTCTCTGCTACCTATCTGGTAGAGGAGAGTTTGTCCTaGGCCAATGAGATGAATGGA +
Preference number: 5 (lower is better)
Translates to: FSCSSEAPCALVSATYLVEESLS*ANEMNG
Trigger: TCCATTCATCTCATTGGCCAAGGACAAACTCTCCTC...TACCAGATAGGTAGCAGAGACCAAGGCGCAGGGTGCTTCAGATGAGCAAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTATCACTTGGCAGTGGTaGGAGCCAGGTGTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAITWQW*EPGVCQ
Trigger: CTGGCACACACCTGGCTCCAACCACTGCCAAGTGAT...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTTGGGAGCTTCTGGATTaGGAGGGGAGGACGTCCATG +
Preference number: 5 (lower is better)
Translates to: DTISTQIHHLNQAHIHKAWELLD*EGRTSM
Trigger: CATGGACGTCCTCCCCTCCAAATCCAGAAGCTCCCA...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACCTTCTCACCAAAGGCTaGGGGCTTTGGCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: TISTQIHHLNQAHIHKANLLTKG*GLWPGS
Trigger: GCTTCCTGGCCAAAGCCCCAAGCCTTTGGTGAGAAG...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp CTCCACAGCCAGGTCTGCATCAGTAATGATAGTCATTGTGTTCCCCTGGGCCTAATATGGCTTTACCTATaGGAAACGGACAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: LHSQVCISNDSHCVPLGLIWLYL*ETDRED
Trigger: GTCTTCTCTGTCCGTTTCCAATAGGTAAAGCCATAT...TAGGCCCAGGGGAACACAATGACTATCATTACTGATGCAGACCTGGCTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp GACACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAGGACCCCAGGGTTTTaGAGAATGACCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: DTISTQIHHLNQAHIHKARTPGF*RMTILP
Trigger: GGGCAGGATGGTCATTCTCAAAAACCCTGGGGTCCT...AGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS-3UTR CAA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACCCTCCCCTAAGTGTGTaGCATGCACACTGCCCCATT +
Preference number: 5 (lower is better)
Translates to: TISTQIHHLNQAHIHKANPPLSV*HAHCPI
Trigger: AATGGGGCAGTGTGCATGCAACACACTTAGGGGAGG...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS TCA 90 bp GAGCGATTTACTGGGCAGACACGTAGGTGCTGCCAAATAGCTTTTTaGAAGCGGTTTGGTCCCTATTTTAAAGCCTTCATCTTGACCCTA +
Preference number: 5 (lower is better)
Translates to: ERFTGQTRRCCQIAF*KRFGPYFKAFILTL
Trigger: TAGGGTCAAGATGAAGGCTTTAAAATAGGGACCAAACCGCTTTCAAAAAGCTATTTGGCAGCACCTACGTGTCTGCCCAGTAAATCGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS-3UTR CAA 90 bp TTGCAGTCTCTGCCACGCATTATCATGCATGCATGGATACAGTTTCCTCCCTCAATATGGCTTTACCTATaGGAAACGGACAGAGAAGAC +
Preference number: 5 (lower is better)
Translates to: LQSLPRIIMHAWIQFPPSIWLYL*ETDRED
Trigger: GTCTTCTCTGTCCGTTTCCAATAGGTAAAGCCATAT...TGAGGGAGGAAACTGTATCCATGCATGCATGATAATGCGTGGCAGAGACTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS TCA 90 bp CCCTATTTTAAAGCCTTCATCTTGACCCTATTGTTCAGATTTGATTaGAGCCAGGAGCATTGGAAAGAGCCTGGAACTTGGAGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: PYFKAFILTLLFRFD*SQEHWKEPGTWSQA
Trigger: TGCCTGACTCCAAGTTCCAGGCTCTTTCCAATGCTCCTGGCTTCAATCAAATCTGAACAATAGGGTCAAGATGAAGGCTTTAAAATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS-3UTR CAA 90 bp ACAATTTCAACCCAAATACACCACCTCAATCAAGCACACATACACAAGGCTAACTCTGTCAAGTGGGAATaGGCTTCTCACCAAAGGCTT +
Preference number: 5 (lower is better)
Translates to: TISTQIHHLNQAHIHKANSVKWE*ASHQRL
Trigger: AAGCCTTTGGTGAGAAGCCAATTCCCACTTGACAGA...GTTAGCCTTGTGTATGTGTGCTTGATTGAGGTGGTGTATTTGGGTTGAAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS CAA 90 bp CTTCCCGAGCTGCCCCAAGGCCTCGAGGCGAGAGCCGGGACCCTGTaGCCCACAGCCCAGCTCCGCCCTCCCGGCCCTCGGCCAGCACCG +
Preference number: 6 (lower is better)
Translates to: LPELPQGLEARAGTL*PTAQLRPPGPRPAP
Trigger: CGGTGCTGGCCGAGGGCCGGGAGGGCGGAGCTGGGCTGTGGGCAACAGGGTCCCGGCTCTCGCCTCGAGGCCTTGGGGCAGCTCGGGAAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514150.5
CDS GCA 72 bp GCGGTCCTGGCTCCGGGACCCCGGCCGTTCGGGCTCTaGCCGGAGTCTCCGGCTAGGGCCCACGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: AVLAPGPRPFGL*PESPARAHASS
Trigger: AGAGGAAGCGTGGGCCCTAGCCGGAGACTCCGGGCAGAGCCCGAACGGCCGGGGTCCCGGAGCCAGGACCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514150.5
CDS CCA 72 bp TTCAGACTTGAGTCTCCGCCGCAGCCGGGGCGGTCCTaGCTCCGGGACCCCGGCCGTTCGGGCTCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: FRLESPPQPGRS*LRDPGRSGSAR
Trigger: CCGGGCAGAGCCCGAACGGCCGGGGTCCCGGAGCCAGGACCGCCCCGGCTGCGGCGGAGACTCAAGTCTGAA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514150.5
CDS CAA 72 bp CGGACCTTCTCCCGCTCCGCCTCCATGCGCGCGTGCTaGGCCTTACGCTCCTCCTCCTGCTGCCGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: RTFSRSASMRAC*ALRSSSCCRSA
Trigger: GGCGCTGCGGCAGCAGGAGGAGGAGCGTAAGGCCAAGCACGCGCGCATGGAGGCGGAGCGGGAGAAGGTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359546.8
ENST00000393745.8
ENST00000502265.5
ENST00000509837.5
ENST00000512824.5
ENST00000514150.5
ENST00000515094.1
CDS CAA 90 bp GCGCCCGGGCCGAGGTTCTGGCGCGTTTCTCCCTCCCCCTCTTCCTaGACTCCTCCGCCGAGGCGCTCCCTCCTGCCTGGGCTAGCACAC +
Preference number: 6 (lower is better)
Translates to: APGPRFWRVSPSPSS*TPPPRRSLLPGLAH
Trigger: GTGTGCTAGCCCAGGCAGGAGGGAGCGCCTCGGCGGAGGAGTCAAGGAAGAGGGGGAGGGAGAAACGCGCCAGAACCTCGGCCCGGGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000506642.5
CDS GCA 72 bp CAGGGCTCCGGCCCGACTCCACGAGGTGGTTCCTTCTaGTATTCCAGCTCCCGCCGCCGCGTGCAATTCCGC +
Preference number: 6 (lower is better)
Translates to: QGSGPTPRGGSF*YSSSRRRVQFR
Trigger: GCGGAATTGCACGCGGCGGCGGGAGCTGGAATAGCAGAAGGAACCACCTCGTGGAGTCGGGCCGGAGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393745.8
ENST00000512824.5
CDS GCA 72 bp GTGGTTCCTTCTGCTATTCCAGCTCCCGCCGCCGCGTaGAATTCCGCCAGGCGAGCTGGAGCCGCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: VVPSAIPAPAAA*NSARRAGAAAS
Trigger: AGAAGCCGCGGCTCCAGCTCGCCTGGCGGAATTGCACGCGGCGGCGGGAGCTGGAATAGCAGAAGGAACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393745.8
ENST00000512824.5
CDS GCA 72 bp GGAGTGCCTCCCAAGCCTCAGTCCTTATCTCGGATCTaGTGCCGGACCTTCTCCCGCTCCGCCTCCATGCGC +
Preference number: 6 (lower is better)
Translates to: GVPPKPQSLSRI*CRTFSRSASMR
Trigger: GCGCATGGAGGCGGAGCGGGAGAAGGTCCGGCAGCAGATCCGAGATAAGGACTGAGGCTTGGGAGGCACTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS GCA 72 bp TGGCAGGGACCACACCTTCCCAGGGAACTTGCCACTTaGAGCCTGCCCGGCTCATCAGGTGGAGGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: WQGPHLPRELAT*SLPGSSGGGWP
Trigger: TGGCCAGCCTCCACCTGATGAGCCGGGCAGGCTGCAAGTGGCAAGTTCCCTGGGAAGGTGTGGTCCCTGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515502.1
CDS GCA 72 bp ACCTGGGTCCAGCGTCAGGAAGCCGCTGTGCTCCCCTaGCTGACTTTGATCAAGGCTCTCCCCGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TWVQRQEAAVLP*LTLIKALPASS
Trigger: GCTGGAGGCGGGGAGAGCCTTGATCAAAGTCAGGCAGGGGAGCACAGCGGCTTCCTGACGCTGGACCCAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509837.5
CDS GCA 72 bp GGGCCCACGCTTCCTCTTAGTTCGCAGCTAGCTGCCTaGTCGCGGCCCCTCGCAAGGAGCTGTCCTTTCAGC +
Preference number: 6 (lower is better)
Translates to: GPTLPLSSQLAA*SRPLARSCPFS
Trigger: GCTGAAAGGACAGCTCCTTGCGAGGGGCCGCGAGCAGGCAGCTAGCTGCGAACTAAGAGGAAGCGTGGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514150.5
CDS CCA 72 bp GGAACTTGCCACTTGCAGCCTGCCCGGCTCATCAGGTaGAGGCTGGCCAACCAGGTGAGGGAGGTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GTCHLQPARLIR*RLANQVREVVW
Trigger: CCAGACCACCTCCCTCACCTGGTTGGCCAGCCTCCACCTGATGAGCCGGGCAGGCTGCAAGTGGCAAGTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515502.1
CDS TCA 72 bp TCCTGGCAGAGCTGGGATGCGGGCACCTTCAGTCGCTaGGCAGAGCAGATAGCATGGCAGGGACCACACCTT +
Preference number: 6 (lower is better)
Translates to: SWQSWDAGTFSR*AEQIAWQGPHL
Trigger: AAGGTGTGGTCCCTGCCATGCTATCTGCTCTGCTCAGCGACTGAAGGTGCCCGCATCCCAGCTCTGCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359546.8
ENST00000506642.5
ENST00000515502.1
CDS CCA 72 bp CAGAATTTGCATGCAGCGCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCTGGCGGTCCCTGCAACCG +
Preference number: 6 (lower is better)
Translates to: QNLHAALLAGLA*EDVTTWRSLQP
Trigger: CGGTTGCAGGGACCGCCAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCAAATTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393745.8
ENST00000512824.5
CDS CCA 72 bp CAGAATTTGCATGCAGCGCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCTTCAGTGCGCCGGGGACC +
Preference number: 6 (lower is better)
Translates to: QNLHAALLAGLA*EDVTTFSAPGT
Trigger: GGTCCCCGGCGCACTGAAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCAAATTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502265.5
CDS TCA 72 bp GGCGGAGATGAGAGAGGACGCCAGCAGAGGTGGCAGTaGAATCAAGGAGACATGGGAGAGTTCCCACCCAGG +
Preference number: 6 (lower is better)
Translates to: GGDERGRQQRWQ*NQGDMGEFPPR
Trigger: CCTGGGTGGGAACTCTCCCATGTCTCCTTGATTTCACTGCCACCTCTGCTGGCGTCCTCTCTCATCTCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS CCA 72 bp CAAGGAGACAGCAGGAGTCTCATGATCATGCAGCACTaGCTGAGGTGGCCAGGAGTGCCTCCCAAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: QGDSRSLMIMQH*LRWPGVPPKPQ
Trigger: CTGAGGCTTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCTGTCTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS TCA 72 bp GACAACCCTGGTTCAGACACCAGGCACCCATCGCTCTaGGGTCAAGACCCAATGCCCTGCTGGAGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: DNPGSDTRHPSL*GQDPMPCWRRK
Trigger: CTTTCTCCTCCAGCAGGGCATTGGGTCTTGACCTCAGAGCGATGGGTGCCTGGTGTCTGAACCAGGGTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS CCA 72 bp CAGAATTTGCATGCAGCGCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCCTGGTTCAGACACCAGGC +
Preference number: 6 (lower is better)
Translates to: QNLHAALLAGLA*EDVTTLVQTPG
Trigger: GCCTGGTGTCTGAACCAGGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCAAATTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS CAA 72 bp CTTAGATCGACGTCCCCCACTCCCGCGAGCTCAAAGTaGTTCTCTGGGTTCAGACTTGAGTCTCCGCCGCAG +
Preference number: 6 (lower is better)
Translates to: LRSTSPTPASSK*FSGFRLESPPQ
Trigger: CTGCGGCGGAGACTCAAGTCTGAACCCAGAGAACAACTTTGAGCTCGCGGGAGTGGGGGACGTCGATCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514150.5
CDS CCA 72 bp CAGAATTTGCATGCAGCGCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCTTTGCTTCCTGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: QNLHAALLAGLA*EDVTTFASWQS
Trigger: GCTCTGCCAGGAAGCAAAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCAAATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359546.8
CDS CCA 72 bp AGCAGGAGTCTCATGATCATGCAGCACTGGCTGAGGTaGCCAGGAGTGCCTCCCAAGCCTCAGTCCTTATCT +
Preference number: 6 (lower is better)
Translates to: SRSLMIMQHWLR*PGVPPKPQSLS
Trigger: AGATAAGGACTGAGGCTTGGGAGGCACTCCTGGCCACCTCAGCCAGTGCTGCATGATCATGAGACTCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512824.5
CDS CCA 72 bp CTCGAGTCCCCAGTTTCCTCCTCTCTAAGAGAGAAATaGCAATGCCACCTTTCCCCGGCTCCGGCGGAGATT +
Preference number: 6 (lower is better)
Translates to: LESPVSSSLREK*QCHLSPAPAEI
Trigger: AATCTCCGCCGGAGCCGGGGAAAGGTGGCATTGCCATTTCTCTCTTAGAGAGGAGGAAACTGGGGACTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515025.5
ENST00000515094.1
CDS CCA 72 bp CAGAATTTGCATGCAGCGCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCTGCTCGAGTCCCCAGTTT +
Preference number: 6 (lower is better)
Translates to: QNLHAALLAGLA*EDVTTCSSPQF
Trigger: AAACTGGGGACTCGAGCAGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCAAATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515094.1
CDS TCA 72 bp CTGGGTTCTGACCCCAGAGCTGACGCTCTGTGTGAATaGTCTTGGACACGTTTCTTCCCCTCCACAGGTGTC +
Preference number: 6 (lower is better)
Translates to: LGSDPRADALCE*SWTRFFPSTGV
Trigger: GACACCTGTGGAGGGGAAGAAACGTGTCCAAGATCATTCACACAGAGCGTCAGCTCTGGGGTCAGAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515502.1
CDS CCA 72 bp CAGAATTTGCATGCAGCGCTCCTGGCTGGCCTGGCTTaGGAAGATGTGACAACCAGCTGTGTGTCTTTAGGC +
Preference number: 6 (lower is better)
Translates to: QNLHAALLAGLA*EDVTTSCVSLG
Trigger: GCCTAAAGACACACAGCTGGTTGTCACATCTTCCCAAGCCAGGCCAGCCAGGAGCGCTGCATGCAAATTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515502.1
CDS TCA 72 bp CCATCTTCCAGCCTTCTGGTCCAGCTCCTTTCTGTCTaGAAGCCACCAGTCTGTCTTTGCTTCCTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PSSSLLVQLLSV*KPPVCLCFLAE
Trigger: CTCTGCCAGGAAGCAAAGACAGACTGGTGGCTTTCAGACAGAAAGGAGCTGGACCAGAAGGCTGGAAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506642.5
CDS GCA 72 bp TGGGCCCCGCCATCTGACAGGCTGACTCGGGTAACCTaGAGTGGTTGTCCTTATGGCCGTTTTTCTGTTTTT +
Preference number: 6 (lower is better)
Translates to: WAPPSDRLTRVT*SGCPYGRFSVF
Trigger: AAAAACAGAAAAACGGCCATAAGGACAACCACTGCAGGTTACCCGAGTCAGCCTGTCAGATGGCGGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502265.5
CDS GCA 72 bp TTCACCACGCCCATCCAGCTGAGTAGAGATGGAAATTaGTCAGGCTCTGGCAAAGGTCTTGCACAGTACGCC +
Preference number: 6 (lower is better)
Translates to: FTTPIQLSRDGN*SGSGKGLAQYA
Trigger: GGCGTACTGTGCAAGACCTTTGCCAGAGCCTGAGCAATTTCCATCTCTACTCAGCTGGATGGGCGTGGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506642.5
CDS CCA 72 bp TGGTTTCCAACGCCACCGTCATTTCCTTATTTGCCATaGGACCTTCAGCAAGGCCCTAACCTGCTCGAGTCC +
Preference number: 6 (lower is better)
Translates to: WFPTPPSFPYLP*DLQQGPNLLES
Trigger: GGACTCGAGCAGGTTAGGGCCTTGCTGAAGGTCCCATGGCAAATAAGGAAATGACGGTGGCGTTGGAAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS GCA 72 bp AGATCTGGTTTCCAACGCCACCGTCATTTCCTTATTTaGCATGGGACCTTCAGCAAGGCCCTAACCTGCTCG +
Preference number: 6 (lower is better)
Translates to: RSGFQRHRHFLI*HGTFSKALTCS
Trigger: CGAGCAGGTTAGGGCCTTGCTGAAGGTCCCATGGCAAATAAGGAAATGACGGTGGCGTTGGAAACCAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS CAA 72 bp GTAGAGATGGAAATTGCTCAGGCTCTGGCAAAGGTCTaGCACAGTACGCCCCGAATCCATCTTCCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: VEMEIAQALAKV*HSTPRIHLPAF
Trigger: GAAGGCTGGAAGATGGATTCGGGGCGTACTGTGCAAGACCTTTGCCAGAGCCTGAGCAATTTCCATCTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506642.5
CDS CAA 72 bp CATGGCCAAGCAGCTGGTAGACAGCCAAGTCACCATTaGGACCCAGCTCCCAGCTTTATTGTTAGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: HGQAAGRQPSHH*DPAPSFIVSCG
Trigger: TCCACAGCTAACAATAAAGCTGGGAGCTGGGTCCAAATGGTGACTTGGCTGTCTACCAGCTGCTTGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506642.5
CDS CAA 72 bp CAGATCTGGTTTCCAACGCCACCGTCATTTCCTTATTaGCCATGGGACCTTCAGCAAGGCCCTAACCTGCTC +
Preference number: 6 (lower is better)
Translates to: QIWFPTPPSFPY*PWDLQQGPNLL
Trigger: GAGCAGGTTAGGGCCTTGCTGAAGGTCCCATGGCAAATAAGGAAATGACGGTGGCGTTGGAAACCAGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS CCA 72 bp AAGAACCAAAAAGAAGTAGTAACAGGTGGAGTAGGCTaGGGCAGGAGGCCTGGTTACTTCTTGAACATGTCC +
Preference number: 6 (lower is better)
Translates to: KNQKEVVTGGVG*GRRPGYFLNMS
Trigger: GGACATGTTCAAGAAGTAACCAGGCCTCCTGCCCCAGCCTACTCCACCTGTTACTACTTCTTTTTGGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359546.8
ENST00000393745.8
CDS CCA 72 bp ATTGGAAAGAGCCTGGAACTTGGAGTCAGGCAGATCTaGTTTCCAACGCCACCGTCATTTCCTTATTTGCCA +
Preference number: 6 (lower is better)
Translates to: IGKSLELGVRQI*FPTPPSFPYLP
Trigger: TGGCAAATAAGGAAATGACGGTGGCGTTGGAAACCAGATCTGCCTGACTCCAAGTTCCAGGCTCTTTCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS TCA 72 bp ACTGGGCAGACACGTAGGTGCTGCCAAATAGCTTTTTaGAAGCGGTTTGGTCCCTATTTTAAAGCCTTCATC +
Preference number: 6 (lower is better)
Translates to: TGQTRRCCQIAF*KRFGPYFKAFI
Trigger: GATGAAGGCTTTAAAATAGGGACCAAACCGCTTTCAAAAAGCTATTTGGCAGCACCTACGTGTCTGCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS TCA 72 bp CCCAGCTTTATTGTTAGCTGTGGAGCAACAATGAACTaGATGAATTTATTCACCACGCCCATCCAGCTGAGT +
Preference number: 6 (lower is better)
Translates to: PSFIVSCGATMN*MNLFTTPIQLS
Trigger: ACTCAGCTGGATGGGCGTGGTGAATAAATTCATTCAGTTCATTGTTGCTCCACAGCTAACAATAAAGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506642.5
CDS TCA 72 bp AAAGCCTTCATCTTGACCCTATTGTTCAGATTTGATTaGAGCCAGGAGCATTGGAAAGAGCCTGGAACTTGG +
Preference number: 6 (lower is better)
Translates to: KAFILTLLFRFD*SQEHWKEPGTW
Trigger: CCAAGTTCCAGGCTCTTTCCAATGCTCCTGGCTTCAATCAAATCTGAACAATAGGGTCAAGATGAAGGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515025.5
CDS TCA 72 bp GAAAGCGGTTTGGTCCCTATTTTAAAGCCTTCATCTTaGCCCTATTGTTCAGATTTGATTGAAGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: ESGLVPILKPSS*PYCSDLIEARS
Trigger: GCTCCTGGCTTCAATCAAATCTGAACAATAGGGTCAAGATGAAGGCTTTAAAATAGGGACCAAACCGCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515025.5