Pregenerated sensors for CPHXL (Homo sapiens)
Ensembl gene IDs: ENSG00000283755Ensembl transcript IDs: ENST00000640559.2
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTaGATCCTTGGTTCCCTGCTGCAGACCCTTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: CVSLTLSTTLQS*ILGSLLQTLVH Trigger: GTGGACAAGGGTCTGCAGCAGGGAACCAAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCGGCATAGTTGTGAGCTaGAGCCTGGGTCTCCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LTCDCVSLTLSTTLQSCIGIVVS*SLGLLA Trigger: TGCCAGGAGACCCAGGCTGCAGCTCACAACTATGCC...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CCA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCGCAGAGTTGCATCCTTaGTTCCCTGCTGCAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: LTCDCVSLTLSTTLQSCIAELHP*FPAADP Trigger: AGGGTCTGCAGCAGGGAACCAAGGATGCAACTCTGC...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTGGTCCTGGGTTGCTCTaGAGCCCTTTCCTGCATATC | + |
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Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILGPGLL*SPFLHI Trigger: GATATGCAGGAAAGGGCTTCAGAGCAACCCAGGACC...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCATTTGGGTCCTGGGTTaGTCTGAAGCCCTTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LTCDCVSLTLSTTLQSCIIWVLG*SEALSC Trigger: GCAGGAAAGGGCTTCAGAGCAACCCAGGACCCAAAT...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCTCCTTGGTTCCCTGCTaGAGACCCTTGTCCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LTCDCVSLTLSTTLQSCISLVPC*RPLSTL Trigger: AAGAGTGGACAAGGGTCTGCAGCAGGGAACCAAGGA...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTGCATCCTTGGTTCCCTaGTGCAGACCCTTGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILASLVP*CRPLST Trigger: AGTGGACAAGGGTCTGCAGCAGGGAACCAAGGATGC...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CCA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCAGAGAGGCTCTGCTTaGTGGCATAGTTGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTCDCVSLTLSTTLQSCIQRGSA*WHSCEL Trigger: CAGCTCACAACTATGCCACCAAGCAGAGCCTCTCTG...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTTGGTGCTGCTGCAGGTaGTACTGCCAATCATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILWCCCR*YCQSFC Trigger: GCAGAATGATTGGCAGTATCACCTGCAGCAGCACCA...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCTGCCAATCATTCTGCTaGTGTTGTCCCAGCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LTCDCVSLTLSTTLQSCICQSFC*CCPSSE Trigger: CTCACTGCTGGGACAACAGCAGCAGAATGATTGGCA...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTAGAGGCTCTGCTTGGTaGCATAGTTGTGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILRGSAW*HSCELQ Trigger: CTGCAGCTCACAACTATGCCACCAAGCAGAGCCTCT...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTGCTGCATTTGGGTCCTaGGTTGCTCTGAAGCCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILAAFGS*VALKPF Trigger: AAAGGGCTTCAGAGCAACCCAGGACCCAAATGCAGC...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTATAGCACAGCCTGGATaGTTTTCAGTGCCTGTGACC | + |
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Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILIAQPG*FSVPVT Trigger: GGTCACAGGCACTGAAAAGCATCCAGGCTGTGCTAT...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCACTACTTTGCAGAGTTaGATCCTTGGTTCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LTCDCVSLTLSTTLQSCITTLQS*ILGSLL Trigger: CAGCAGGGAACCAAGGATGCAACTCTGCAAAGTAGT...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR TCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTGCGACTGTGTTTCTCTaGCACTTAGCACTACTTTGC | + |
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Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILATVFL*HLALLC Trigger: GCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGC...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTTACTGCCAATCATTCTaGTGCTGTTGTCCCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILYCQSF*CCCPSS Trigger: ACTGCTGGGACAACAGCAGCAGAATGATTGGCAGTA...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR GCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTAGGAAAGGACTTGCATaGTGGCTTTCCTTGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TCDCVSLTLSTTLQSCILRKGLA*WLSLVS Trigger: TGAAACCAAGGAAAGCCAGCATGCAAGTCCTTTCCT...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CAA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCTTTGCAGAGTTGCATCCTaGGTTCCCTGCTGCAGACCC | + |
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Preference number: 5 (lower is better) Translates to: TCDCVSLTLSTTLQSCILCRVAS*VPCCRP Trigger: GGGTCTGCAGCAGGGAACCAAGGATGCAACTCTGCA...AAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS GCA 90 bp | ACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTaGATCCTTGGTTCCCTGCTGCAGACCCTTGTCCACTCTTCAACT | + |
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Preference number: 5 (lower is better) Translates to: TCDCVSLTLSTTLQS*ILGSLLQTLVHSST Trigger: AGTTGAAGAGTGGACAAGGGTCTGCAGCAGGGAACCAAGGATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CAA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCGTAATTCTGAGGCTGTaGGTGCTGCTGCAGGTGATA | + |
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Preference number: 5 (lower is better) Translates to: LTCDCVSLTLSTTLQSCIVILRL*VLLQVI Trigger: TATCACCTGCAGCAGCACCAACAGCCTCAGAATTAC...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CAA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCCCTGCTGCAGACCCTaGTCCACTCTTCAACTTAAA | + |
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Preference number: 5 (lower is better) Translates to: LTCDCVSLTLSTTLQSCIPCCRP*STLQLK Trigger: TTTAAGTTGAAGAGTGGACAAGGGTCTGCAGCAGGG...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CAA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCCACTACTTTGCAGAGTaGCATCCTTGGTTCCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LTCDCVSLTLSTTLQSCIHYFAE*HPWFPA Trigger: AGCAGGGAACCAAGGATGCAACTCTGCAAAGTAGTG...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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| CDS-3UTR CAA 90 bp | CTGACCTGCGACTGTGTTTCTCTGACACTTAGCACTACTTTGCAGAGTTGCATCATTATAGCCCATTTCTaGACTGGGAATCCACTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LTCDCVSLTLSTTLQSCIIIAHF*TGNPLF Trigger: AAACAGTGGATTCCCAGTCAAGAAATGGGCTATAAT...GATGCAACTCTGCAAAGTAGTGCTAAGTGTCAGAGAAACACAGTCGCAGGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640559.2 |
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