RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPED1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106034

Ensembl transcript IDs: ENST00000310396.10, ENST00000340646.9, ENST00000423795.5, ENST00000428526.5, ENST00000443817.1, ENST00000450913.6, ENST00000466055.1, ENST00000495036.5, ENST00000520801.5

Found 317 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATTATTTAACTGTGTGTGTACTGGTGTGCATGCATGTGCTGGTGTaGACAAGTGTGTGTGGTCGATCCCAAATGTGTGCGATGTGCAGC +
Preference number: 1 (lower is better)
Translates to: HYLTVCVLVCMHVLV*TSVCGRSQMCAMCS
Trigger: GCTGCACATCGCACACATTTGGGATCGACCACACACACTTGTGCACACCAGCACATGCATGCACACCAGTACACACACAGTTAAATAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGACCATTGTCCGGGTaGCTAGCTCGTCTCCAGCTC +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMRPLSG*LARLQL
Trigger: GAGCTGGAGACGAGCTAGTCACCCGGACAATGGTCT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAAATGTGTGCGATGTaGAGCGCTTGGCTCCTAGAC +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQMCAM*SAWLLD
Trigger: GTCTAGGAGCCAAGCGCTGCACATCGCACACATTTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCGATCCCAAATGTGTaGGATGTGCAGCGCTTGGCT +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSIPNV*DVQRLA
Trigger: AGCCAAGCGCTGCACATCGCACACATTTGGGATCGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR GCA 90 bp GTGGCTTCACTGTTTTTAAAAGGTGACTCGAAGTACTCGGCTTTAATTGCATTCGGACTCACTGGAAGTTaGAGTTCTGGGAATCTTCTA +
Preference number: 2 (lower is better)
Translates to: VASLFLKGDSKYSALIAFGLTGS*SSGNLL
Trigger: TAGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCC...GAATGCAATTAAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGTGAAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520801.5
3UTR-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGTGGACATATGCAAATaGTTGGTGGGAAAAAGCACC +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMVDICK*LVGKST
Trigger: GGTGCTTTTTCCCACCAAGCATTTGCATATGTCCAC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCTTTATTATCACAATaGCATACCTGGCCCACAGTG +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSLLSQ*HTWPTV
Trigger: CACTGTGGGCCAGGTATGGCATTGTGATAATAAAGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGGACAACTTCTACTTaGCAGTGGAATGTCATTGGT +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMRTTST*QWNVIG
Trigger: ACCAATGACATTCCACTGGCAAGTAGAAGTTGTCCT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGTATATCTTTCACTGTaGAATGGACTGGTGTTCAAG +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMVYLSL*NGLVFK
Trigger: CTTGAACACCAGTCCATTTCACAGTGAAAGATATAC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCTCCTGGTAAAGAATaGAAGGACAACTTCTACTTG +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSPGKE*KDNFYL
Trigger: CAAGTAGAAGTTGTCCTTTCATTCTTTACCAGGAGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGATTTCAGCCATGTATTaGATTAACCCTCTCAGCTTC +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMISAMY*INPLSF
Trigger: GAAGCTGAGAGGGTTAATTCAATACATGGCTGAAAT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGGCCCACAGTGGTTCTaGTTAATAATTATGCTTCAA +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMGPQWF*LIIMLQ
Trigger: TTGAAGCATAATTATTAACCAGAACCACTGTGGGCC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACATATGCAAATGCTTaGTGGGAAAAAGCACCTATG +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTYANA*WEKAPM
Trigger: CATAGGTGCTTTTTCCCACCAAGCATTTGCATATGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCCATTGTAACAGTGTaGTGTTATCTCACAACAAAG +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSIVTV*CYLTTK
Trigger: CTTTGTTGTGAGATAACATCACACTGTTACAATGGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTTCATTAATTCAGACTaGAGTTACCCATCGAAGTAC +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMFINSD*SYPSKY
Trigger: GTACTTCGATGGGTAACTGCAGTCTGAATTAATGAA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACTTCTACTTGCCAGTaGAATGTCATTGGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTSTCQ*NVIGFS
Trigger: AGAAAAACCAATGACATTCCACTGGCAAGTAGAAGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR GCA 72 bp ACTGTGTGTGTACTGGTGTGCATGCATGTGCTGGTGTaGACAAGTGTGTGTGGTCGATCCCAAATGTGTGCG +
Preference number: 3 (lower is better)
Translates to: TVCVLVCMHVLV*TSVCGRSQMCA
Trigger: CGCACACATTTGGGATCGACCACACACACTTGTGCACACCAGCACATGCATGCACACCAGTACACACACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR CAA 90 bp GTGGCTTCACTGTTTTTAAAAGGTGACTCGAAGTACTCGGCTTTAATTGCATTCGGGACTCACTGGAAGTaGCAGTTCTGGGAATCTTCT +
Preference number: 3 (lower is better)
Translates to: VASLFLKGDSKYSALIAFGTHWK*QFWESS
Trigger: AGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCCC...GAATGCAATTAAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGTGAAGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520801.5
3UTR-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAGGACAACTTCTACTaGCCAGTGGAATGTCATTGG +
Preference number: 3 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKDNFY*PVECHW
Trigger: CCAATGACATTCCACTGGCAAGTAGAAGTTGTCCTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGACATATGCAAATGCTaGGTGGGAAAAAGCACCTAT +
Preference number: 3 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMDICKC*VGKSTY
Trigger: ATAGGTGCTTTTTCCCACCAAGCATTTGCATATGTC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGAGAGGCTGCACACATaGGTAACGTTTTATGTCATT +
Preference number: 3 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMERLHT*VTFYVI
Trigger: AATGACATAAAACGTTACCAATGTGTGCAGCCTCTC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR TCA 72 bp TTTCCAGTTTCTTGGTTGCATAGTCCCTGTATTAGGTaGGATAAGCTAAGCACTGTAACAGATAGCCCAAAA +
Preference number: 3 (lower is better)
Translates to: FPVSWLHSPCIR*DKLSTVTDSPK
Trigger: TTTTGGGCTATCTGTTACAGTGCTTAGCTTATCTCACCTAATACAGGGACTATGCAACCAAGAAACTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423795.5
3UTR-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGCCAGTGGAATGTCATaGGTTTTTCTCCTTTTCAAT +
Preference number: 3 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMASGMS*VFLLFN
Trigger: ATTGAAAAGGAGAAAAACCAATGACATTCCACTGGC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310396.10
3UTR-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCTCTTCAAATTCCCTaGTGGAACATTCCTGTTCTT +
Preference number: 3 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSLQIP*WNIPVL
Trigger: AAGAACAGGAATGTTCCACAAGGGAATTTGAAGAGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGGCAAAGCTTGGCCCTaGCTGCTCGTACAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIGKAWP*LLVQVH
Trigger: GTGCACCTGTACGAGCAGGCAGGGCCAAGCTTTGCC...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTAAGCTTGGCCCTGCCTaGTCGTACAGGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIKLGPA*SYRCTL
Trigger: CAAGGTGCACCTGTACGAGCAGGCAGGGCCAAGCTT...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGTGGCAGTTGTGGGGCTaGCAGGTTATTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVWQLWG*QVISLQ
Trigger: CTGGAGAGAAATAACCTGGCAGCCCCACAACTGCCA...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTATGGCCCTTCGGCCATaGCTGCCAAAGTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIMALRP*LPKCVS
Trigger: GGAGACACACTTTGGCAGCCATGGCCGAAGGGCCAT...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTAGCTGGCAAAGCTTaGCCCTGCCTGCTCGTACAG +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIVAGKA*PCLLVQ
Trigger: CTGTACGAGCAGGCAGGGCCAAGCTTTGCCAGCTAC...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGTCTGTTTGCCTTACATaGTGGCAGGCAGGAGCGAAT +
Preference number: 4 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVSVCLT*WQAGAN
Trigger: ATTCGCTCCTGCCTGCCACCATGTAAGGCAAACAGA...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423795.5
CDS-3UTR CCA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGAAATGCTCGTGTACCTaGAGCACTACAGGGTACATG +
Preference number: 4 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVKCSCT*STTGYM
Trigger: CATGTACCCTGTAGTGCTCCAGGTACACGAGCATTT...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGCCCAGGAGTAGTAGATaGGAAGAGCAGTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVPRSSR*EEQLEL
Trigger: CAATTCCAACTGCTCTTCCCATCTACTACTCCTGGG...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGCCATATTGGCAGTTGTaGGGCTGCCAGGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVPYWQL*GCQVIS
Trigger: AGAAATAACCTGGCAGCCCCACAACTGCCAATATGG...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTTAGGACACCATATTaGCAGTTGTGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIVRTPY*QLWGCQ
Trigger: CTGGCAGCCCCACAACTGCCAATATGGTGTCCTAAC...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTATGTCAAAAGCCTGTTaGGGTGAACTGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIMSKAC*GELALR
Trigger: CCTGAGAGCCAGTTCACCTCAACAGGCTTTTGACAT...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTCAAAACCACATGCTGTaGAGGCCTCAAACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIQNHML*RPQTRA
Trigger: TGCCCTTGTTTGAGGCCTTCACAGCATGTGGTTTTG...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTCAGAGTCTCACCGTGTaGTGGAGATTCATCCACAAC +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIQSLTV*WRFIHN
Trigger: GTTGTGGATGAATCTCCAGCACACGGTGAGACTCTG...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGGGTCCCAGGATGACTaGATTGTGTCTTCAATTACG +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIGSQDD*IVSSIT
Trigger: CGTAATTGAAGACACAATCCAGTCATCCTGGGACCC...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAGGGGCAGCGGCTGTaGGCTTCCTCGACCCTCGGA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQGQRL*ASSTLG
Trigger: TCCGAGGGTCGAGGAAGCTCACAGCCGCTGCCCCTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGAAAGTGTGTCTCCATTaGTTCTTTGACCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVKVCLH*FFDLSG
Trigger: ACCAGAAAGGTCAAAGAATCAATGGAGACACACTTT...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTTCATGCATCAGTGACTaGATCCCAGGAGTAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWISCISD*IPGVVD
Trigger: ATCTACTACTCCTGGGATTCAGTCACTGATGCATGA...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp TGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGCACAGACCAGTCCACTTCACCTTTaGACCTGCAGGACGACCCCC +
Preference number: 4 (lower is better)
Translates to: CCGHQTKDSVFTVSEAQTSPLHL*TCRTTP
Trigger: GGGGGTCGTCCTGCAGGTGCAAAGGTGAAGTGGACT...GGTCTGTGCTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATGACCACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR CCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGGTAGCTGGCAAAGCTTaGCCCTGCCTGCTCGTACAG +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGVAGKA*PCLLVQ
Trigger: CTGTACGAGCAGGCAGGGCCAAGCTTTGCCAGCTAC...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTAGTCTCACCGTGTGCTaGAGATTCATCCACAACAAA +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWISLTVC*RFIHNK
Trigger: TTTGTTGTGGATGAATCTCCAGCACACGGTGAGACT...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTAAACAAGGGCAGACTTaGGCGGTCTTCTCTATAGAT +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIKQGQT*AVFSID
Trigger: ATCTATAGAGAAGACCGCCCAAGTCTGCCCTTGTTT...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp ATCACCATTGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGCTTCACCTTTGCACCTaGAGGACGACCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: ITIVVVIKLRTAFSLSLKLHLCT*RTTPTQ
Trigger: CTGGGTGGGGGTCGTCCTGCAGGTGCAAAGGTGAAG...CTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATGACCACAACAATGGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR CCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTTCTATGGAAGGTCTTTaGTCCCAGAGTAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWISMEGL*SQSRCF
Trigger: GAAACATCTACTCTGGGACCAAAGACCTTCCATAGA...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTAATCTGTTTGCCTTTTaGTGTAAACCTAACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWINLFAF*CKPNWH
Trigger: GTGCCAGTTAGGTTTACATCAAAAGGCAAACAGATT...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTACTGTTTTTAAAAGGTaGCTCGAAGTACTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWITVFKR*LEVLGF
Trigger: AAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGT...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTTGAAAGCAGAATCTaGATCTATGGAAGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIVESRI*IYGRSL
Trigger: CAAAGACCTTCCATAGATGCAGATTCTGCTTTCAAC...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGTTATTTCCAGTTTCTTaGTTGCATAGTCCCTGTATT +
Preference number: 4 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVLFPVS*LHSPCI
Trigger: AATACAGGGACTATGCAACCAAGAAACTGGAAATAA...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423795.5
CDS-3UTR TCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGATGTCAAAAGCCTGTTaGGGTGAACTGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGMSKAC*GELALR
Trigger: CCTGAGAGCCAGTTCACCTCAACAGGCTTTTGACAT...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTCCCTTCGGCCATGGCTaGCAAAGTGTGTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGPFGHG*QSVSPL
Trigger: CAATGGAGACACACTTTGGCAGCCATGGCCGAAGGG...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR GCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTATAATCCTTCCTTTCTaGAAAGTGGCTGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIIILPF*KVAAVF
Trigger: AAATACAGCAGCCACTTTGCAGAAAGGAAGGATTAT...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGGCAAAGCTTGGCCCTaGCTGCTCGTACAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMGKAWP*LLVQVH
Trigger: GTGCACCTGTACGAGCAGGCAGGGCCAAGCTTTGCC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGCAAAGCTTGGCCCTaGCTGCTCGTACAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRGKAWP*LLVQVH
Trigger: GTGCACCTGTACGAGCAGGCAGGGCCAAGCTTTGCC...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGAGGCCTGTAGAGTATaGCCCTTCGGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMEACRV*PFGHGC
Trigger: GCAGCCATGGCCGAAGGGCCATACTCTACAGGCCTC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTCTGCTTGATATGACATaGTGTGTTTTCATCATCACT +
Preference number: 4 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWILLDMT*CVFIIT
Trigger: AGTGATGATGAAAACACACCATGTCATATCAAGCAG...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGCCCAGAGGGTAGCTaGCAAAGCTTGGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSPEGS*QSLALP
Trigger: AGGCAGGGCCAAGCTTTGCCAGCTACCCTCTGGGCT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAGCTTGGCCCTGCCTaGTCGTACAGGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKLGPA*SYRCTL
Trigger: CAAGGTGCACCTGTACGAGCAGGCAGGGCCAAGCTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTTGGCAGTTGTGGGGCTaGCAGGTTATTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGWQLWG*QVISLQ
Trigger: CTGGAGAGAAATAACCTGGCAGCCCCACAACTGCCA...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAGTTCAGCTTCACTTaGCCCCTGTCCACGTTGCGG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQFSFT*PLSTLR
Trigger: CCGCAACGTGGACAGGGGCCAAGTGAAGCTGAACTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGATGGCCCTTCGGCCATaGCTGCCAAAGTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMMALRP*LPKCVS
Trigger: GGAGACACACTTTGGCAGCCATGGCCGAAGGGCCAT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGCCTGTTGAGGTGAACTaGCTCTCAGGAATGTCTCAA +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGPVEVN*LSGMSQ
Trigger: TTGAGACATTCCTGAGAGCCAGTTCACCTCAACAGG...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGTAGCTGGCAAAGCTTaGCCCTGCCTGCTCGTACAG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMVAGKA*PCLLVQ
Trigger: CTGTACGAGCAGGCAGGGCCAAGCTTTGCCAGCTAC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGCCCAGAGGGTAGCTaGCAAAGCTTGGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCSPEGS*QSLALP
Trigger: AGGCAGGGCCAAGCTTTGCCAGCTACCCTCTGGGCT...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCTGGGCGACAGACCATaGCCAGTTCAGCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMLGDRP*PVQLHL
Trigger: CAAGTGAAGCTGAACTGGTCATGGTCTGTCGCCCAG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTTGCCCGTCGAATGAATaGATGCACGCAAAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGCPSNE*MHAKGL
Trigger: TAACCCCTTTGCGTGCATTCATTCATTCGACGGGCA...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCCCTTCGGCCATGGCTaGCAAAGTGTGTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMPFGHG*QSVSPL
Trigger: CAATGGAGACACACTTTGGCAGCCATGGCCGAAGGG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGACAGGGTGTTCCTTCTaGTTTCTTAGAAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGTGCSF*FLRRQA
Trigger: TGCCTGTCTTCTAAGAAAGCAGAAGGAACACCCTGT...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR GCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCCAAGTCAGGTTTATGTaGAGGGGTGGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCQVRFM*RGGAGR
Trigger: CCTCCCTGCCCCACCCCTGCACATAAACCTGACTTG...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGCAAGTCAGGTTTATGTaGAGGGGTGGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQQVRFM*RGGAGR
Trigger: CCTCCCTGCCCCACCCCTGCACATAAACCTGACTTG...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACGACAAGGGAACACTaGGCGACAGACCATGACCAG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTTREH*ATDHDQ
Trigger: CTGGTCATGGTCTGTCGCCCAGTGTTCCCTTGTCGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTTGCCTGGGTTTCAGTaGATGTGTGTGGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMLPGFQ*MCVGQP
Trigger: GGGCTGTCCCACACACATCCACTGAAACCCAGGCAA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGGAGGCCTGTAGAGTATaGCCCTTCGGCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVEACRV*PFGHGC
Trigger: GCAGCCATGGCCGAAGGGCCATACTCTACAGGCCTC...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTCACAGAGGGACTCACTaGAAGTTGCAGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGHRGTH*KLQFWE
Trigger: TTCCCAGAACTGCAACTTCCAGTGAGTCCCTCTGTG...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp ATCACCATTGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGCACAGAGGGACTCACTaGAAGTTGCAGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: ITIVVVIKLRTAFSLSLKHRGTH*KLQFWE
Trigger: TTCCCAGAACTGCAACTTCCAGTGAGTCCCTCTGTG...CTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATGACCACAACAATGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR TCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCCTGGGCGACAGACCATaGCCAGTTCAGCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCLGDRP*PVQLHL
Trigger: CAAGTGAAGCTGAACTGGTCATGGTCTGTCGCCCAG...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR TCA 90 bp GCACATGACTTCCTTGGATATACAGGGTGTTCCTTCTGCTTTCTTAGAAGACAGTTTAATTGCATTCCCTaGTCCAGACACACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: AHDFLGYTGCSFCFLRRQFNCIP*SRHTEG
Trigger: TCCCTCTGTGTGTCTGGATCAGGGAATGCAATTAAA...CTGTCTTCTAAGAAAGCAGAAGGAACACCCTGTATATCCAAGGAAGTCATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR TCA 90 bp CCCAAGAGCCCAGATCACCATTGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTTTTTAAAAGGTaGCTCGAAGTACTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PKSPDHHCCGHQTKDSVFTVFKR*LEVLGF
Trigger: AAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGT...GAAAACGCTGTCCTTAGTTTGATGACCACAACAATGGTGATCTGGGCTCTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACTGTGCCCGTCGAATaGATGAATGCACGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTVPVE*MNARKG
Trigger: CCCTTTGCGTGCATTCATTCATTCGACGGGCACAGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGAAATTCATGCATCAGTaGCTGAATCCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGKFMHQ*LNPRSS
Trigger: ACTACTCCTGGGATTCAGTCACTGATGCATGAATTT...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGGCACTGCTGGAGTTaGGGCTTAGTTAGGACACCA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMRHCWS*GLVRTP
Trigger: TGGTGTCCTAACTAAGCCTCAACTCCAGCAGTGCCT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGAGGCACTGCTGGAGTTaGGGCTTAGTTAGGACACCA +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRRHCWS*GLVRTP
Trigger: TGGTGTCCTAACTAAGCCTCAACTCCAGCAGTGCCT...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CTGGCACATGACTTCCTTGGATATACAGGGTGTTCCTTCTGCTTTCTTAGAAGATCCTACTCACAGTACTaGTTGAAAAGGAGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LAHDFLGYTGCSFCFLRRSYSQY*LKRRVH
Trigger: GTGGACTCTCCTTTTCAATCAGTACTGTGAGTAGGA...TCTTCTAAGAAAGCAGAAGGAACACCCTGTATATCCAAGGAAGTCATGTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR GCA 90 bp GCACATGACTTCCTTGGATATACAGGGTGTTCCTTCTGCTTTCTTAGAAGACAGGGACTCACTGGAAGTTaGAGTTCTGGGAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: AHDFLGYTGCSFCFLRRQGLTGS*SSGNLL
Trigger: TAGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCC...CTGTCTTCTAAGAAAGCAGAAGGAACACCCTGTATATCCAAGGAAGTCATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGCCTGCTCGTACAGGTaGACCTTGCACAGACACTTA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMACSYR*TLHRHL
Trigger: TAAGTGTCTGTGCAAGGTGCACCTGTACGAGCAGGC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGAAGCTTGGCCCTGCCTaGTCGTACAGGTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVKLGPA*SYRCTL
Trigger: CAAGGTGCACCTGTACGAGCAGGCAGGGCCAAGCTT...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTGGCAGTTGTGGGGCTaGCAGGTTATTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMWQLWG*QVISLQ
Trigger: CTGGAGAGAAATAACCTGGCAGCCCCACAACTGCCA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCACGACAAGGGAACACTaGGCGACAGACCATGACCAG +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCTTREH*ATDHDQ
Trigger: CTGGTCATGGTCTGTCGCCCAGTGTTCCCTTGTCGT...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CCA 90 bp ATCACCATTGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGACCTTTCTGGTTTCCTaGGCATTACCAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ITIVVVIKLRTAFSLSLKTFLVS*ALPERR
Trigger: CCTTCTCTCTGGTAATGCCCAGGAAACCAGAAAGGT...CTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATGACCACAACAATGGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR CCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTCCCAGGAGTAGTAGATaGGAAGAGCAGTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGPRSSR*EEQLEL
Trigger: CAATTCCAACTGCTCTTCCCATCTACTACTCCTGGG...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGTTAGGACACCATATTaGCAGTTGTGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMVRTPY*QLWGCQ
Trigger: CTGGCAGCCCCACAACTGCCAATATGGTGTCCTAAC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGTCCCAGGATGACTaGATTGTGTCTTCAATTACG +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGGSQDD*IVSSIT
Trigger: CGTAATTGAAGACACAATCCAGTCATCCTGGGACCC...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTGCCCGTCGAATGAATaGATGCACGCAAAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMCPSNE*MHAKGL
Trigger: TAACCCCTTTGCGTGCATTCATTCATTCGACGGGCA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCACTGTGCCCGTCGAATaGATGAATGCACGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCTVPVE*MNARKG
Trigger: CCCTTTGCGTGCATTCATTCATTCGACGGGCACAGT...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGACTGTGCCCGTCGAATaGATGAATGCACGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQTVPVE*MNARKG
Trigger: CCCTTTGCGTGCATTCATTCATTCGACGGGCACAGT...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGATGTCAAAAGCCTGTTaGGGTGAACTGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMMSKAC*GELALR
Trigger: CCTGAGAGCCAGTTCACCTCAACAGGCTTTTGACAT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAAAACCACATGCTGTaGAGGCCTCAAACAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQNHML*RPQTRA
Trigger: TGCCCTTGTTTGAGGCCTTCACAGCATGTGGTTTTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGAGGCACTGCTGGAGTTaGGGCTTAGTTAGGACACCA +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQRHCWS*GLVRTP
Trigger: TGGTGTCCTAACTAAGCCTCAACTCCAGCAGTGCCT...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp ATCACCATTGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGACAGGGTGTTCCTTCTaGTTTCTTAGAAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: ITIVVVIKLRTAFSLSLKTGCSF*FLRRQA
Trigger: TGCCTGTCTTCTAAGAAAGCAGAAGGAACACCCTGT...CTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATGACCACAACAATGGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR GCA 90 bp TCCAGACACACAGAGGGACTCACTGGAAGTTGCAGTTCTGGGAATCTTCTAACTATAATCCTTCCTTTCTaGAAAGTGGCTGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: SRHTEGLTGSCSSGNLLTIILPF*KVAAVF
Trigger: AAATACAGCAGCCACTTTGCAGAAAGGAAGGATTAT...AGTTAGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCCCTCTGTGTGTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR GCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGCCTGCTCGTACAGGTaGACCTTGCACAGACACTTA +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQACSYR*TLHRHL
Trigger: TAAGTGTCTGTGCAAGGTGCACCTGTACGAGCAGGC...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAGAGTCTCACCGTGTaGTGGAGATTCATCCACAAC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQSLTV*WRFIHN
Trigger: GTTGTGGATGAATCTCCAGCACACGGTGAGACTCTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTCTGCACAAAACCACATaGTGTGAAGGCCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGLHKTT*CEGLKQ
Trigger: TTGTTTGAGGCCTTCACAGCATGTGGTTTTGTGCAG...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGCACAGACCTGGAAGCTCCTATGGAAGTTGCAGTTCTaGGAATCTTCTAACTATTTG +
Preference number: 4 (lower is better)
Translates to: QTKDSVFTVSEAQTWKLLWKLQF*ESSNYL
Trigger: CAAATAGTTAGAAGATTCCCAGAACTGCAACTTCCA...TAGGAGCTTCCAGGTCTGTGCTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCACAGAGGGACTCACTaGAAGTTGCAGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMHRGTH*KLQFWE
Trigger: TTCCCAGAACTGCAACTTCCAGTGAGTCCCTCTGTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGAAAGATTGTTTCATGTaGAGCAAGGACTGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGKDCFM*SKDCRF
Trigger: GAAACGACAGTCCTTGCTCCACATGAAACAATCTTT...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTCAGAATCTGCATCTATaGAAGGTCTTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGQNLHL*KVFGPR
Trigger: TCTGGGACCAAAGACCTTCCATAGATGCAGATTCTG...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTAGTCTCACCGTGTGCTaGAGATTCATCCACAACAAA +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGSLTVC*RFIHNK
Trigger: TTTGTTGTGGATGAATCTCCAGCACACGGTGAGACT...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCGTTAGGACACCATATTaGCAGTTGTGGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCVRTPY*QLWGCQ
Trigger: CTGGCAGCCCCACAACTGCCAATATGGTGTCCTAAC...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp GTGGCTTCACTGTTTTTAAAAGGTGACTCGAAGTACTCGGCTTTAATTGCATTCTCTGAAGCACAGACCTaGAAGCTCCTACTCACAGTA +
Preference number: 4 (lower is better)
Translates to: VASLFLKGDSKYSALIAFSEAQT*KLLLTV
Trigger: TACTGTGAGTAGGAGCTTCCAGGTCTGTGCTTCAGA...GAATGCAATTAAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGTGAAGCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGAGCTCTTCCATGGATaGCAGTCAAAAGTGGATGAC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMELFHG*QSKVDD
Trigger: GTCATCCACTTTTGACTGTCATCCATGGAAGAGCTC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGCCTTTCTTCAGCGATaGCAACCGTATAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMAFLQR*QPYSHV
Trigger: AACATGGCTATACGGTTGTCATCGCTGAAGAAAGGC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGCCTTTCTTCAGCGATaGCAACCGTATAGCCATGTT +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRAFLQR*QPYSHV
Trigger: AACATGGCTATACGGTTGTCATCGCTGAAGAAAGGC...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR TCA 90 bp GTGGCTTCACTGTTTTTAAAAGGTGACTCGAAGTACTCGGCTTTAATTGCATTCAACCTAACTGGCACATaGCTTCCTTGGATATACAGG +
Preference number: 4 (lower is better)
Translates to: VASLFLKGDSKYSALIAFNLTGT*LPWIYR
Trigger: CCTGTATATCCAAGGAAGTCATGTGCCAGTTAGGTT...GAATGCAATTAAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGTGAAGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR TCA 90 bp CTGGCACATGACTTCCTTGGATATACAGGGTGTTCCTTCTGCTTTCTTAGAAGAAATCTGTTTGCCTTTTaGTGTAAACCTAACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LAHDFLGYTGCSFCFLRRNLFAF*CKPNWH
Trigger: GTGCCAGTTAGGTTTACATCAAAAGGCAAACAGATT...TCTTCTAAGAAAGCAGAAGGAACACCCTGTATATCCAAGGAAGTCATGTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR TCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCTGCCCGTCGAATGAATaGATGCACGCAAAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCCPSNE*MHAKGL
Trigger: TAACCCCTTTGCGTGCATTCATTCATTCGACGGGCA...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAGGTTTCCTCTGGATaGATCAGCAAACCACAATCC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQVSSG*ISKPQS
Trigger: GGATTGTGGTTTGCTGATTCATCCAGAGGAAACCTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGCAGGTTTCCTCTGGATaGATCAGCAAACCACAATCC +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRQVSSG*ISKPQS
Trigger: GGATTGTGGTTTGCTGATTCATCCAGAGGAAACCTG...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACTACCTCATGGAAATaGCATCCACACTTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTTSWK*HPHFPC
Trigger: ACAGGGGAAGTGTGGATGTCATTTCCATGAGGTAGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp ATCACCATTGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGACTCACAGTACTGATTaGAAAGGAGAGTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: ITIVVVIKLRTAFSLSLKTHSTD*KGESTS
Trigger: TGAAGTGGACTCTCCTTTTCAATCAGTACTGTGAGT...CTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATGACCACAACAATGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGATCCTTTCTTGCATCTaGTTGCCTGGGTTTCAGTGG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMILSCI*LPGFQW
Trigger: CCACTGAAACCCAGGCAAGCAGATGCAAGAAAGGAT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGATAATCCTTCCTTTCTaGAAAGTGGCTGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGIILPF*KVAAVF
Trigger: AAATACAGCAGCCACTTTGCAGAAAGGAAGGATTAT...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGGCCTGCTCGTACAGGTaGACCTTGCACAGACACTTA +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVACSYR*TLHRHL
Trigger: TAAGTGTCTGTGCAAGGTGCACCTGTACGAGCAGGC...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGGGGACGTGATCTTTaGAAGAGGTGTTCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMRGRDL*KRCSSA
Trigger: TGCACTTGAACACCTCTTGCAAAGATCACGTCCCCT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTTGCATCTGCTTGCCTaGGTTTCAGTGGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMLHLLA*VSVDVC
Trigger: ACACACATCCACTGAAACCCAGGCAAGCAGATGCAA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACCTTTCTGGTTTCCTaGGCATTACCAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTFLVS*ALPERR
Trigger: CCTTCTCTCTGGTAATGCCCAGGAAACCAGAAAGGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGTGGAAGTTGCAGTTCTaGGAATCTTCTAACTATTTG +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGWKLQF*ESSNYL
Trigger: CAAATAGTTAGAAGATTCCCAGAACTGCAACTTCCA...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCCACAGAGGGACTCACTaGAAGTTGCAGTTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCHRGTH*KLQFWE
Trigger: TTCCCAGAACTGCAACTTCCAGTGAGTCCCTCTGTG...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCCTGTTGAGGTGAACTaGCTCTCAGGAATGTCTCAA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMPVEVN*LSGMSQ
Trigger: TTGAGACATTCCTGAGAGCCAGTTCACCTCAACAGG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAATGCTCGTGTACCTaGAGCACTACAGGGTACATG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKCSCT*STTGYM
Trigger: CATGTACCCTGTAGTGCTCCAGGTACACGAGCATTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGATGGGAAGAGCAGTTaGAATTGTCCCAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMDGKSS*NCPRLP
Trigger: TGGAAGTCTGGGACAATTCCAACTGCTCTTCCCATC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCCCAGGAGTAGTAGATaGGAAGAGCAGTTGGAATTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMPRSSR*EEQLEL
Trigger: CAATTCCAACTGCTCTTCCCATCTACTACTCCTGGG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAAAGAGACCAGTATTaGGTCAGGACTGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKRDQY*VRTEPG
Trigger: TCCTGGCTCAGTCCTGACCCAATACTGGTCTCTTTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGAAAAGAGACCAGTATTaGGTCAGGACTGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRKRDQY*VRTEPG
Trigger: TCCTGGCTCAGTCCTGACCCAATACTGGTCTCTTTT...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGCTGCTTGATATGACATaGTGTGTTTTCATCATCACT +
Preference number: 4 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGLLDMT*CVFIIT
Trigger: AGTGATGATGAAAACACACCATGTCATATCAAGCAG...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCCATATTGGCAGTTGTaGGGCTGCCAGGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMPYWQL*GCQVIS
Trigger: AGAAATAACCTGGCAGCCCCACAACTGCCAATATGG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp ATCACCATTGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGAAAACTCAACCTTTCTaGTTTCCTGGGCATTACCAG +
Preference number: 4 (lower is better)
Translates to: ITIVVVIKLRTAFSLSLKKTQPF*FPGHYQ
Trigger: CTGGTAATGCCCAGGAAACCAGAAAGGTTGAGTTTT...CTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATGACCACAACAATGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAACACCCAGTCGTATaGCTCCAATTCATCTCACAC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKHPVV*LQFISH
Trigger: GTGTGAGATGAATTGGAGTCATACGACTGGGTGTTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp GTGGCTTCACTGTTTTTAAAAGGTGACTCGAAGTACTCGGCTTTAATTGCATTCAAGCACTGTTTGTCCTaGGAGAATCCTTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: VASLFLKGDSKYSALIAFKHCLS*ENPFLH
Trigger: ATGCAAGAAAGGATTCTCTCAGGACAAACAGTGCTT...GAATGCAATTAAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGTGAAGCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAACCTAACTGGCACATaGCTTCCTTGGATATACAGG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMNLTGT*LPWIYR
Trigger: CCTGTATATCCAAGGAAGTCATGTGCCAGTTAGGTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTTTAATTGCATTCCCTaGTCCAGACACACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMFNCIP*SRHTEG
Trigger: TCCCTCTGTGTGTCTGGATCAGGGAATGCAATTAAA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCATGCATCAGTGACTaGATCCCAGGAGTAGTAGAT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSCISD*IPGVVD
Trigger: ATCTACTACTCCTGGGATTCAGTCACTGATGCATGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCCAGGTTTCCTCTGGATaGATCAGCAAACCACAATCC +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCQVSSG*ISKPQS
Trigger: GGATTGTGGTTTGCTGATTCATCCAGAGGAAACCTG...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCCATCCACTGGCAGATaGAATCCAATTCCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMPSTGR*NPIPKV
Trigger: AACTTTGGGAATTGGATTTCATCTGCCAGTGGATGG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGCGAATGAGGGCCAAGTaGAAGGGAAAATCCCTTATA +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRRMRAK*KGKSLI
Trigger: TATAAGGGATTTTCCCTTTCACTTGGCCCTCATTCG...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423795.5
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTTTCTTGCATCTGCTTaGCTGGGTTTCAGTGGATGT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMFLASA*LGFSGC
Trigger: ACATCCACTGAAACCCAGGCAAGCAGATGCAAGAAA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGTTTCTTGCATCTGCTTaGCTGGGTTTCAGTGGATGT +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRFLASA*LGFSGC
Trigger: ACATCCACTGAAACCCAGGCAAGCAGATGCAAGAAA...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGAGAGAATCCTTTCTTaGATCTGCTTGCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMERILS*ICLPGF
Trigger: AAACCCAGGCAAGCAGATGCAAGAAAGGATTCTCTC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGAGAGAATCCTTTCTTaGATCTGCTTGCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRERILS*ICLPGF
Trigger: AAACCCAGGCAAGCAGATGCAAGAAAGGATTCTCTC...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACAGGGTGTTCCTTCTaGTTTCTTAGAAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTGCSF*FLRRQA
Trigger: TGCCTGTCTTCTAAGAAAGCAGAAGGAACACCCTGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGGACTCACTGGAAGTTaGAGTTCTGGGAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMGLTGS*SSGNLL
Trigger: TAGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGAGTCTCACCGTGTaGTGGAGATTCATCCACAAC +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVQSLTV*WRFIHN
Trigger: GTTGTGGATGAATCTCCAGCACACGGTGAGACTCTG...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCTGCACAAAACCACATaGTGTGAAGGCCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMLHKTT*CEGLKQ
Trigger: TTGTTTGAGGCCTTCACAGCATGTGGTTTTGTGCAG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGCAAACCACAATCCTaGACAAAACCACATGCTGTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSKPQS*TKPHAV
Trigger: CACAGCATGTGGTTTTGTGCAGGATTGTGGTTTGCT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGTGCCATGTACTTTCTaGCATTCCTGCAACGTTTCA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMVPCTF*HSCNVS
Trigger: TGAAACGTTGCAGGAATGGCAGAAAGTACATGGCAC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGTTGCATCTGCTTGCCTaGGTTTCAGTGGATGTGTGT +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQLHLLA*VSVDVC
Trigger: ACACACATCCACTGAAACCCAGGCAAGCAGATGCAA...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCACCTTTCTGGTTTCCTaGGCATTACCAGAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCTFLVS*ALPERR
Trigger: CCTTCTCTCTGGTAATGCCCAGGAAACCAGAAAGGT...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGCCTGTTGAGGTGAACTaGCTCTCAGGAATGTCTCAA +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQPVEVN*LSGMSQ
Trigger: TTGAGACATTCCTGAGAGCCAGTTCACCTCAACAGG...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAGAATCTGCATCTATaGAAGGTCTTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQNLHL*KVFGPR
Trigger: TCTGGGACCAAAGACCTTCCATAGATGCAGATTCTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGAAATGCTCGTGTACCTaGAGCACTACAGGGTACATG +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQKCSCT*STTGYM
Trigger: CATGTACCCTGTAGTGCTCCAGGTACACGAGCATTT...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGATGGGAAGAGCAGTTaGAATTGTCCCAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQDGKSS*NCPRLP
Trigger: TGGAAGTCTGGGACAATTCCAACTGCTCTTCCCATC...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCGATGGGAAGAGCAGTTaGAATTGTCCCAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCDGKSS*NCPRLP
Trigger: TGGAAGTCTGGGACAATTCCAACTGCTCTTCCCATC...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAAAAGAGACCAGTATTaGGTCAGGACTGAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCKRDQY*VRTEPG
Trigger: TCCTGGCTCAGTCCTGACCCAATACTGGTCTCTTTT...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGTCTCACCGTGTGCTaGAGATTCATCCACAACAAA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSLTVC*RFIHNK
Trigger: TTTGTTGTGGATGAATCTCCAGCACACGGTGAGACT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAACAAGGGCAGACTTaGGCGGTCTTCTCTATAGAT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKQGQT*AVFSID
Trigger: ATCTATAGAGAAGACCGCCCAAGTCTGCCCTTGTTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACAACCAATACAGTCTaGCCAGTATTCTCTAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTTNTV*PVFSRG
Trigger: TCCCCTAGAGAATACTGGCCAGACTGTATTGGTTGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAGCACTGTTTGTCCTaGGAGAATCCTTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKHCLS*ENPFLH
Trigger: ATGCAAGAAAGGATTCTCTCAGGACAAACAGTGCTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGAAGCACTGTTTGTCCTaGGAGAATCCTTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRKHCLS*ENPFLH
Trigger: ATGCAAGAAAGGATTCTCTCAGGACAAACAGTGCTT...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGCACTACAGGGTACATaGAACTGCCATAACCAATAT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMALQGT*NCHNQY
Trigger: ATATTGGTTATGGCAGTTTCATGTACCCTGTAGTGC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGCACTACAGGGTACATaGAACTGCCATAACCAATAT +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRALQGT*NCHNQY
Trigger: ATATTGGTTATGGCAGTTTCATGTACCCTGTAGTGC...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGTCATGCATCAGTGACTaGATCCCAGGAGTAGTAGAT +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQSCISD*IPGVVD
Trigger: ATCTACTACTCCTGGGATTCAGTCACTGATGCATGA...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAATTCATGCATCAGTaGCTGAATCCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKFMHQ*LNPRSS
Trigger: ACTACTCCTGGGATTCAGTCACTGATGCATGAATTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTGGTTGAATCTCCAATaGACAGAATCTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMWLNLQ*TESSFL
Trigger: GAGGAAGGAAGATTCTGTTCATTGGAGATTCAACCA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAATGTTGGTCTCAATaGAGGGCTTATCCAGAACTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKCWSQ*RAYPEL
Trigger: CAGTTCTGGATAAGCCCTTCATTGAGACCAACATTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTTGGAATTAAGCCACTaGACACCACCAACAACCAAT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMLELSH*TPPTTN
Trigger: ATTGGTTGTTGGTGGTGTTCAGTGGCTTAATTCCAA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGATTTATTGGACCTCTaGCATGATATGGCGATCGAA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMDLLDL*HDMAIE
Trigger: TTCGATCGCCATATCATGTCAGAGGTCCAATAAATC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCGGACTCACTGGAAGTTaGAGTTCTGGGAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCGLTGS*SSGNLL
Trigger: TAGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCC...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGCAAACCACAATCCTaGACAAAACCACATGCTGTG +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCSKPQS*TKPHAV
Trigger: CACAGCATGTGGTTTTGTGCAGGATTGTGGTTTGCT...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGAGCAAACCACAATCCTaGACAAAACCACATGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQSKPQS*TKPHAV
Trigger: CACAGCATGTGGTTTTGTGCAGGATTGTGGTTTGCT...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTTGGAAGTTGCAGTTCTaGGAATCTTCTAACTATTTG +
Preference number: 4 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGWKLQF*ESSNYL
Trigger: CAAATAGTTAGAAGATTCCCAGAACTGCAACTTCCA...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCTATGGAAGGTCTTTaGTCCCAGAGTAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSMEGL*SQSRCF
Trigger: GAAACATCTACTCTGGGACCAAAGACCTTCCATAGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCCAGAATCTGCATCTATaGAAGGTCTTTGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCQNLHL*KVFGPR
Trigger: TCTGGGACCAAAGACCTTCCATAGATGCAGATTCTG...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGAAACAAGGGCAGACTTaGGCGGTCTTCTCTATAGAT +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQKQGQT*AVFSID
Trigger: ATCTATAGAGAAGACCGCCCAAGTCTGCCCTTGTTT...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCCATATTGGCAGTTGTaGGGCTGCCAGGTTATTTCT +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVPYWQL*GCQVIS
Trigger: AGAAATAACCTGGCAGCCCCACAACTGCCAATATGG...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAAGTGTGTCTCCATTaGTTCTTTGACCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKVCLH*FFDLSG
Trigger: ACCAGAAAGGTCAAAGAATCAATGGAGACACACTTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGAACCTAACTGGCACATaGCTTCCTTGGATATACAGG +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVNLTGT*LPWIYR
Trigger: CCTGTATATCCAAGGAAGTCATGTGCCAGTTAGGTT...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAATCTGTTTGCCTTTTaGTGTAAACCTAACTGGCAC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMNLFAF*CKPNWH
Trigger: GTGCCAGTTAGGTTTACATCAAAAGGCAAACAGATT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGTTTAATTGCATTCCCTaGTCCAGACACACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVFNCIP*SRHTEG
Trigger: TCCCTCTGTGTGTCTGGATCAGGGAATGCAATTAAA...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACTGTTTTTAAAAGGTaGCTCGAAGTACTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTVFKR*LEVLGF
Trigger: AAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGACTGTTTTTAAAAGGTaGCTCGAAGTACTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRTVFKR*LEVLGF
Trigger: AAAGCCGAGTACTTCGAGTCACCTTTTAAAAACAGT...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGAAATTCATGCATCAGTaGCTGAATCCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQKFMHQ*LNPRSS
Trigger: ACTACTCCTGGGATTCAGTCACTGATGCATGAATTT...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGATAGTAGGAATAACTaGTCAAAGTCTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMDSRNN*SKSSHH
Trigger: ATGGTGGGAAGACTTTGATCAGTTATTCCTACTATC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGATTGGACCTCTGACATaGTATGGCGATCGAAAATTT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMIGPLT*YGDRKF
Trigger: AAATTTTCGATCGCCATATCATGTCAGAGGTCCAAT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTTTTCCAAAAGGTTGTaGCAAAGAATCATAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMFSKRL*QRIIGP
Trigger: GGGACCTATGATTCTTTGGCACAACCTTTTGGAAAA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGGGACTCACTGGAAGTTaGAGTTCTGGGAATCTTCTA +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVGLTGS*SSGNLL
Trigger: TAGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCC...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGTTGAAAGCAGAATCTaGATCTATGGAAGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMVESRI*IYGRSL
Trigger: CAAAGACCTTCCATAGATGCAGATTCTGCTTTCAAC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCTGCACAAAACCACATaGTGTGAAGGCCTCAAACAA +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVLHKTT*CEGLKQ
Trigger: TTGTTTGAGGCCTTCACAGCATGTGGTTTTGTGCAG...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGATGACAGTCAAAAGTaGATGACTCAGTTTTCATCC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMDDSQK*MTQFSS
Trigger: GGATGAAAACTGAGTCATCCACTTTTGACTGTCATC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAAAGATTGTTTCATGTaGAGCAAGGACTGTCGTTTC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMKDCFM*SKDCRF
Trigger: GAAACGACAGTCCTTGCTCCACATGAAACAATCTTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCCATTCCAGTGGATGTaGCTGTGTCTTTTTATTCAT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMPFQWM*LCLFIH
Trigger: ATGAATAAAAAGACACAGCCACATCCACTGGAATGG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGCCATTCCAGTGGATGTaGCTGTGTCTTTTTATTCAT +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRPFQWM*LCLFIH
Trigger: ATGAATAAAAAGACACAGCCACATCCACTGGAATGG...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGGCACTACAGGGTACATaGAACTGCCATAACCAATAT +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVALQGT*NCHNQY
Trigger: ATATTGGTTATGGCAGTTTCATGTACCCTGTAGTGC...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTGTTCTTATCTTCTGTaGAAGAATTCCATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMCSYLL*KNSIPV
Trigger: CACTGGAATGGAATTCTTTCACAGAAGATAAGAACA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCTTTGATCTTTGGATaGAAGTCAGGATTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSLIFG*KSGFSS
Trigger: GGAACTAAATCCTGACTTTCATCCAAAGATCAAAGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGATTTCAGAACAAACCTaGTTTATTGGACCTCTGACA +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMISEQT*FIGPLT
Trigger: TGTCAGAGGTCCAATAAATCAGGTTTGTTCTGAAAT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGATAATCCTTCCTTTCTaGAAAGTGGCTGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMIILPF*KVAAVF
Trigger: AAATACAGCAGCCACTTTGCAGAAAGGAAGGATTAT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAAGAGGTGTTCAAGTaGATTTTCAAATGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQEVFK*IFKCWS
Trigger: AGACCAACATTTGAAAATGCACTTGAACACCTCTTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR GCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCTTCCAGTTTCTTGGTTaGATAGTCCCTGTATTAGGT +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCFQFLG*IVPVLG
Trigger: ACCTAATACAGGGACTATGCAACCAAGAAACTGGAA...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423795.5
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTGGAAGTTGCAGTTCTaGGAATCTTCTAACTATTTG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMWKLQF*ESSNYL
Trigger: CAAATAGTTAGAAGATTCCCAGAACTGCAACTTCCA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGTCTATGGAAGGTCTTTaGTCCCAGAGTAGATGTTTC +
Preference number: 4 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVSMEGL*SQSRCF
Trigger: GAAACATCTACTCTGGGACCAAAGACCTTCCATAGA...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCCCATTCCAGTGGATGTaGCTGTGTCTTTTTATTCAT +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCPFQWM*LCLFIH
Trigger: ATGAATAAAAAGACACAGCCACATCCACTGGAATGG...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCTGCTTGATATGACATaGTGTGTTTTCATCATCACT +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMLLDMT*CVFIIT
Trigger: AGTGATGATGAAAACACACCATGTCATATCAAGCAG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGACCTCTGACATGATATaGCGATCGAAAATTTGTTAC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMTSDMI*RSKICY
Trigger: GTAACAAATTTTCGATCGCCATATCATGTCAGAGGT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR TCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCTGTTCTTATCTTCTGTaGAAGAATTCCATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCCSYLL*KNSIPV
Trigger: CACTGGAATGGAATTCTTTCACAGAAGATAAGAACA...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGTGTTCTTATCTTCTGTaGAAGAATTCCATTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQCSYLL*KNSIPV
Trigger: CACTGGAATGGAATTCTTTCACAGAAGATAAGAACA...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCTCTTTGATCTTTGGATaGAAGTCAGGATTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCSLIFG*KSGFSS
Trigger: GGAACTAAATCCTGACTTTCATCCAAAGATCAAAGA...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR TCA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGTCTTTGATCTTTGGATaGAAGTCAGGATTTAGTTCC +
Preference number: 4 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQSLIFG*KSGFSS
Trigger: GGAACTAAATCCTGACTTTCATCCAAAGATCAAAGA...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR GCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGTTTGCTTCATCCCTaGTTAAGAATTTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSLLHP*LRIFQK
Trigger: CTTTTGGAAAATTCTTAAGCAGGGATGAAGCAAACT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTGTTACCACATCAAATaGGACTTCACAGTAATAATC +
Preference number: 4 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMCYHIK*DFTVII
Trigger: GATTATTACTGTGAAGTCCCATTTGATGTGGTAACA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CCA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGTGTTACCACATCAAATaGGACTTCACAGTAATAATC +
Preference number: 4 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRCYHIK*DFTVII
Trigger: GATTATTACTGTGAAGTCCCATTTGATGTGGTAACA...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CCA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCTGTTACCACATCAAATaGGACTTCACAGTAATAATC +
Preference number: 4 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCCYHIK*DFTVII
Trigger: GATTATTACTGTGAAGTCCCATTTGATGTGGTAACA...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS CCA 90 bp GAATCCTTTCTTGCATCTGCTTGCCTGGGTTTCAGTGGATGTGTGTaGGACAGCCCCAGGGGCAGCGGCTGTGAGCTTCCTCGACCCTCG +
Preference number: 5 (lower is better)
Translates to: ESFLASACLGFSGCV*DSPRGSGCELPRPS
Trigger: CGAGGGTCGAGGAAGCTCACAGCCGCTGCCCCTGGGGCTGTCCCACACACATCCACTGAAACCCAGGCAAGCAGATGCAAGAAAGGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000340646.9
ENST00000428526.5
ENST00000450913.6
ENST00000495036.5
CDS-3UTR CAA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGGGTAGCTGGCAAAGCTaGGCCCTGCCTGCTCGTACA +
Preference number: 5 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVGSWQS*ALPART
Trigger: TGTACGAGCAGGCAGGGCCAAGCTTTGCCAGCTACC...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGGTAGCTGGCAAAGCTaGGCCCTGCCTGCTCGTACA +
Preference number: 5 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIGSWQS*ALPART
Trigger: TGTACGAGCAGGCAGGGCCAAGCTTTGCCAGCTACC...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS TCA 90 bp TGGACATCGACACCCAACTTCCTTCCTCCCAGGCACTGCTGGAGTTaGGGCTTAGTTAGGACACCATATTGGCAGTTGTGGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: WTSTPNFLPPRHCWS*GLVRTPYWQLWGCQ
Trigger: CTGGCAGCCCCACAACTGCCAATATGGTGTCCTAACTAAGCCTCAACTCCAGCAGTGCCTGGGAGGAAGGAAGTTGGGTGTCGATGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000423795.5
ENST00000450913.6
ENST00000466055.1
CDS-3UTR CAA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGCTTTCTTGCATCTGCTaGCCTGGGTTTCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVLSCIC*PGFQWM
Trigger: CATCCACTGAAACCCAGGCAAGCAGATGCAAGAAAG...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CAA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGGAAGAGCAGTTGGAATaGTCCCAGACTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVEEQLE*SQTSKF
Trigger: GAACTTGGAAGTCTGGGACAATTCCAACTGCTCTTC...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS CCA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTaGATTGTGTCTTCAATTACGGCTTCTAGGAACTCTCTGGACATC +
Preference number: 5 (lower is better)
Translates to: CAGVGQGGHLGSQDD*IVSSITASRNSLDI
Trigger: GATGTCCAGAGAGTTCCTAGAAGCCGTAATTGAAGACACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000423795.5
ENST00000450913.6
ENST00000466055.1
CDS-3UTR CAA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTTCGTACAGGTGCACCTaGCACAGACACTTAGGAGTT +
Preference number: 5 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWISYRCT*HRHLGV
Trigger: AACTCCTAAGTGTCTGTGCAAGGTGCACCTGTACGA...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTCAAACAAGGGCAGACTaGGGCGGTCTTCTCTATAGA +
Preference number: 5 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIQTRAD*GGLLYR
Trigger: TCTATAGAGAAGACCGCCCAAGTCTGCCCTTGTTTG...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTCAGTCACACGTCCTGTaGTCCGAACAACTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIQSHVL*SEQLRQ
Trigger: TTGCCTTAGTTGTTCGGACAACAGGACGTGTGACTG...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS TCA 90 bp TCTCCAATGAACAGAATCTTCCTTCCTCCCAGGCACTGCTGGAGTTaGGGCTTAGTTAGGACACCATATTGGCAGTTGTGGGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SPMNRIFLPPRHCWS*GLVRTPYWQLWGCQ
Trigger: CTGGCAGCCCCACAACTGCCAATATGGTGTCCTAACTAAGCCTCAACTCCAGCAGTGCCTGGGAGGAAGGAAGATTCTGTTCATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTCTTCGGCTCGAAAGATaGTTTCATGTGGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWILRLER*FHVEQG
Trigger: TCCTTGCTCCACATGAAACAATCTTTCGAGCCGAAG...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp TTATGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTCCCAGGATGACTGGATaGTGTCTTCAATTACGGCTT +
Preference number: 5 (lower is better)
Translates to: LCAGVGQGGHLGSQDDWIPRMTG*CLQLRL
Trigger: AAGCCGTAATTGAAGACACAATCCAGTCATCCTGGG...AATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS CCA 90 bp AGGATGACTGGATTGTGTCTTCAATTACGGCTTCTAGGAACTCTCTaGACATCGACACCCAACTTCCTTCCTCCCAGGCACTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: RMTGLCLQLRLLGTL*TSTPNFLPPRHCWS
Trigger: ACTCCAGCAGTGCCTGGGAGGAAGGAAGTTGGGTGTCGATGTCCAGAGAGTTCCTAGAAGCCGTAATTGAAGACACAATCCAGTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423795.5
ENST00000450913.6
ENST00000466055.1
CDS-3UTR CAA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGGGCCCTAGGCCAGCATaGAGCCTTTCTTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGGPRPA*SLSSAM
Trigger: CATCGCTGAAGAAAGGCTCAATGCTGGCCTAGGGCC...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CAA 90 bp CTGGCACATGACTTCCTTGGATATACAGGGTGTTCCTTCTGCTTTCTTAGAAGAGAGTCCACTTCACCTTaGCACCTGCAGGACGACCCC +
Preference number: 5 (lower is better)
Translates to: LAHDFLGYTGCSFCFLRRESTSP*HLQDDP
Trigger: GGGGTCGTCCTGCAGGTGCAAAGGTGAAGTGGACTC...TCTTCTAAGAAAGCAGAAGGAACACCCTGTATATCCAAGGAAGTCATGTGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR CAA 90 bp TGTGCAGGGGTGGGGCAGGGAGGTCATTTAGGGTCCCAGGATGACTGGATTGTGTGCATCAAATGGCACTaGTGGTTTTTCAATGTTCTT +
Preference number: 5 (lower is better)
Translates to: CAGVGQGGHLGSQDDWIVCIKWH*WFFNVL
Trigger: AAGAACATTGAAAAACCACAAGTGCCATTTGATGCA...CACAATCCAGTCATCCTGGGACCCTAAATGACCTCCCTGCCCCACCCCTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS TCA 90 bp CTGGTTTCCTGGGCATTACCAGAGAGAAGGAAGCACTGTTTGTCCTaGGAGAATCCTTTCTTGCATCTGCTTGCCTGGGTTTCAGTGGAT +
Preference number: 5 (lower is better)
Translates to: LVSWALPERRKHCLS*ENPFLHLLAWVSVD
Trigger: ATCCACTGAAACCCAGGCAAGCAGATGCAAGAAAGGATTCTCTCAGGACAAACAGTGCTTCCTTCTCTCTGGTAATGCCCAGGAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000340646.9
ENST00000428526.5
ENST00000450913.6
ENST00000495036.5
CDS CCA 90 bp CTGCACAAAACCACATGCTGTGAAGGCCTCAAACAAGGGCAGACTTaGGCGGTCTTCTCTATAGATGGTGAGTTTGTACGTGATCAGAGT +
Preference number: 5 (lower is better)
Translates to: LHKTTCCEGLKQGQT*AVFSIDGEFVRDQS
Trigger: ACTCTGATCACGTACAAACTCACCATCTATAGAGAAGACCGCCCAAGTCTGCCCTTGTTTGAGGCCTTCACAGCATGTGGTTTTGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000450913.6
CDS TCA 90 bp CTGTTTGCCTTACATGGTGGCAGGCAGGAGCGAATGAGGGCCAAGTaGAAGGGAAAATCCCTTATAAAACCATCAGATCTCGTGAGACTT +
Preference number: 5 (lower is better)
Translates to: LFALHGGRQERMRAK*KGKSLIKPSDLVRL
Trigger: AAGTCTCACGAGATCTGATGGTTTTATAAGGGATTTTCCCTTTCACTTGGCCCTCATTCGCTCCTGCCTGCCACCATGTAAGGCAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423795.5
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCCAGTTCAGCTTCACTaGGCCCCTGTCCACGTTGCG +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMPVQLH*APVHVA
Trigger: CGCAACGTGGACAGGGGCCAAGTGAAGCTGAACTGG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp TGTTGTGGTCATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGCACAGACCGGGACTCACTGGAAGTaGCAGTTCTGGGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: CCGHQTKDSVFTVSEAQTGTHWK*QFWESS
Trigger: AGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCCC...GGTCTGTGCTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATGACCACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR CAA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGTCGTACAGGTGCACCTaGCACAGACACTTAGGAGTT +
Preference number: 5 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGSYRCT*HRHLGV
Trigger: AACTCCTAAGTGTCTGTGCAAGGTGCACCTGTACGA...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGGTAGCTGGCAAAGCTaGGCCCTGCCTGCTCGTACA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMGSWQS*ALPART
Trigger: TGTACGAGCAGGCAGGGCCAAGCTTTGCCAGCTACC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGTAGAAGAGACAGATaGCCACCACTAAGCCCACCA +
Preference number: 5 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGGRRDR*PPLSPP
Trigger: TGGTGGGCTTAGTGGTGGCAATCTGTCTCTTCTACC...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGGCCCTAGGCCAGCATaGAGCCTTTCTTCAGCGATG +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMGPRPA*SLSSAM
Trigger: CATCGCTGAAGAAAGGCTCAATGCTGGCCTAGGGCC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGCTTCGGCTCGAAAGATaGTTTCATGTGGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGLRLER*FHVEQG
Trigger: TCCTTGCTCCACATGAAACAATCTTTCGAGCCGAAG...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGGAAGAGCAGTTGGAATaGTCCCAGACTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGEEQLE*SQTSKF
Trigger: GAACTTGGAAGTCTGGGACAATTCCAACTGCTCTTC...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS CCA 90 bp CATCAAACTAAGGACAGCGTTTTCACTGTCTCTGAAGCACAGACCTaGAAGCTCCTACTCACAGTACTGATTGAAAAGGAGAGTCCACTT +
Preference number: 5 (lower is better)
Translates to: HQTKDSVFTVSEAQT*KLLLTVLIEKESPL
Trigger: AAGTGGACTCTCCTTTTCAATCAGTACTGTGAGTAGGAGCTTCCAGGTCTGTGCTTCAGAGACAGTGAAAACGCTGTCCTTAGTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS-3UTR CAA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTAGATGGGAAGAGCAGTaGGAATTGTCCCAGACTTCC +
Preference number: 5 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGRWEEQ*ELSQTS
Trigger: GGAAGTCTGGGACAATTCCAACTGCTCTTCCCATCT...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGGTAGAAGAGACAGATaGCCACCACTAAGCCCACCA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMGRRDR*PPLSPP
Trigger: TGGTGGGCTTAGTGGTGGCAATCTGTCTCTTCTACC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGGAGTTTCCACTCCAATaGTCACTGTTACCACATCAA +
Preference number: 5 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGEFPLQ*SLLPHQ
Trigger: TTGATGTGGTAACAGTGACAATTGGAGTGGAAACTC...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp TCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGGGTTTCCAGTTTCTTGGTaGCATAGTCCCTGTATTAGG +
Preference number: 5 (lower is better)
Translates to: SLRKIVQVIQVRFMCRGGFPVSW*HSPCIR
Trigger: CCTAATACAGGGACTATGCAACCAAGAAACTGGAAA...CCCACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423795.5
CDS TCA 90 bp AGGATTTCCCACAGGATTTGCCACATCATAAAATTCATGCATCAGTaGCTGAATCCCAGGAGTAGTAGATGGGAAGAGCAGTTGGAATTG +
Preference number: 5 (lower is better)
Translates to: RISHRICHIIKFMHQ*LNPRSSRWEEQLEL
Trigger: CAATTCCAACTGCTCTTCCCATCTACTACTCCTGGGATTCAGTCACTGATGCATGAATTTTATGATGTGGCAAATCCTGTGGGAAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000428526.5
ENST00000443817.1
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCTTTCTTGCATCTGCTaGCCTGGGTTTCAGTGGATG +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMLSCIC*PGFQWM
Trigger: CATCCACTGAAACCCAGGCAAGCAGATGCAAGAAAG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGGGACTCACTGGAAGTaGCAGTTCTGGGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMGTHWK*QFWESS
Trigger: AGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCCC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGGACTCACTGGAAGTaGCAGTTCTGGGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRGTHWK*QFWESS
Trigger: AGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCCC...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAGATGGGAAGAGCAGTaGGAATTGTCCCAGACTTCC +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMRWEEQ*ELSQTS
Trigger: GGAAGTCTGGGACAATTCCAACTGCTCTTCCCATCT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTCGTACAGGTGCACCTaGCACAGACACTTAGGAGTT +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMSYRCT*HRHLGV
Trigger: AACTCCTAAGTGTCTGTGCAAGGTGCACCTGTACGA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAAACAAGGGCAGACTaGGGCGGTCTTCTCTATAGA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQTRAD*GGLLYR
Trigger: TCTATAGAGAAGACCGCCCAAGTCTGCCCTTGTTTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAGTCACACGTCCTGTaGTCCGAACAACTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQSHVL*SEQLRQ
Trigger: TTGCCTTAGTTGTTCGGACAACAGGACGTGTGACTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGCAGTCACACGTCCTGTaGTCCGAACAACTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRQSHVL*SEQLRQ
Trigger: TTGCCTTAGTTGTTCGGACAACAGGACGTGTGACTG...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGAACCGTATAGCCATGTaGAGTCAGAATGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMNRIAM*SQNVLV
Trigger: CACCAGCACATTCTGACTCAACATGGCTATACGGTT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGAACCGTATAGCCATGTaGAGTCAGAATGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRNRIAM*SQNVLV
Trigger: CACCAGCACATTCTGACTCAACATGGCTATACGGTT...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450913.6
CDS-3UTR CAA 90 bp TTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGACTCACTGGAAGTaGCAGTTCTGGGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: LLLSQKNSPGDSSQVYVQGTHWK*QFWESS
Trigger: AGAAGATTCCCAGAACTGCAACTTCCAGTGAGTCCC...CTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCTTCGGCTCGAAAGATaGTTTCATGTGGAGCAAGGA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMLRLER*FHVEQG
Trigger: TCCTTGCTCCACATGAAACAATCTTTCGAGCCGAAG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGCCGCTAGCAGTAGTTaGCCAATTGCTTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMAASSS*PIASFI
Trigger: TATGAAGGAAGCAATTGGCAAACTACTGCTAGCGGC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGAAGAGCAGTTGGAATaGTCCCAGACTTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMEEQLE*SQTSKF
Trigger: GAACTTGGAAGTCTGGGACAATTCCAACTGCTCTTC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGATGGGAAGAGCAGTaGGAATTGTCCCAGACTTCC +
Preference number: 5 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCRWEEQ*ELSQTS
Trigger: GGAAGTCTGGGACAATTCCAACTGCTCTTCCCATCT...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCCAAACAAGGGCAGACTaGGGCGGTCTTCTCTATAGA +
Preference number: 5 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCQTRAD*GGLLYR
Trigger: TCTATAGAGAAGACCGCCCAAGTCTGCCCTTGTTTG...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp TATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGCCCAGGATGACTGGATaGTGTCTTCAATTACGGCTT +
Preference number: 5 (lower is better)
Translates to: YYSLRKIVQVIQVRFMCRPRMTG*CLQLRL
Trigger: AAGCCGTAATTGAAGACACAATCCAGTCATCCTGGG...CCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCGCCGCTAGCAGTAGTTaGCCAATTGCTTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCAASSS*PIASFI
Trigger: TATGAAGGAAGCAATTGGCAAACTACTGCTAGCGGC...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS TCA 90 bp TCTTTGCAAGAGGTGTTCAAGTGCATTTTCAAATGTTGGTCTCAATaGAGGGCTTATCCAGAACTGGGGATAGTAGGAATAACTGATCAA +
Preference number: 5 (lower is better)
Translates to: SLQEVFKCIFKCWSQ*RAYPELGIVGITDQ
Trigger: TTGATCAGTTATTCCTACTATCCCCAGTTCTGGATAAGCCCTTCATTGAGACCAACATTTGAAAATGCACTTGAACACCTCTTGCAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCAACTCCAATCAAGTTaGCTTCATCCCTGCTTAAGA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMQLQSS*LHPCLR
Trigger: TCTTAAGCAGGGATGAAGCAAACTTGATTGGAGTTG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGGCCGCTAGCAGTAGTTaGCCAATTGCTTCCTTCATA +
Preference number: 5 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVAASSS*PIASFI
Trigger: TATGAAGGAAGCAATTGGCAAACTACTGCTAGCGGC...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp TACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCAGGGGTGATTTCCCACAGGATTaGCCACATCATAAAATTCAT +
Preference number: 5 (lower is better)
Translates to: YSLRKIVQVIQVRFMCRGDFPQD*PHHKIH
Trigger: ATGAATTTTATGATGTGGCAAATCCTGTGGGAAATC...ACCCCTGCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGAGTTTCCACTCCAATaGTCACTGTTACCACATCAA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMEFPLQ*SLLPHQ
Trigger: TTGATGTGGTAACAGTGACAATTGGAGTGGAAACTC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTACATGATCCCTCTGTaGGTTGAATCTCCAATGAAC +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMYMIPL*VESPMN
Trigger: GTTCATTGGAGATTCAACCAACAGAGGGATCATGTA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCGAGTTTCCACTCCAATaGTCACTGTTACCACATCAA +
Preference number: 5 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCEFPLQ*SLLPHQ
Trigger: TTGATGTGGTAACAGTGACAATTGGAGTGGAAACTC...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGTGCATTTTCAAATGTaGGTCTCAATGAAGGGCTTA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMVHFQM*VSMKGL
Trigger: TAAGCCCTTCATTGAGACCAACATTTGAAAATGCAC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGATGGCGATCGAAAATTaGTTACAGTGCCTTGTTGTA +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMMAIEN*LQCLVV
Trigger: TACAACAAGGCACTGTAACAAATTTTCGATCGCCAT...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS TCA 90 bp TGTACTTCACTCTGTGTTAAGAAATGTACTCCATCCACTGGCAGATaGAATCCAATTCCCAAAGTTTTGATGATCACTAGGATATTGAGT +
Preference number: 5 (lower is better)
Translates to: CTSLCVKKCTPSTGR*NPIPKVLMITRILS
Trigger: ACTCAATATCCTAGTGATCATCAAAACTTTGGGAATTGGATTTCATCTGCCAGTGGATGGAGTACATTTCTTAACACAGAGTGAAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGAATTTTCCAAAAGGTaGTGCCAAAGAATCATAGGT +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMEFSKR*CQRIIG
Trigger: ACCTATGATTCTTTGGCACAACCTTTTGGAAAATTC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGGATTTCCCACAGGATTaGCCACATCATAAAATTCAT +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMDFPQD*PHHKIH
Trigger: ATGAATTTTATGATGTGGCAAATCCTGTGGGAAATC...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGTGCATCAAATGGCACTaGTGGTTTTTCAATGTTCTT +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMCIKWH*WFFNVL
Trigger: AAGAACATTGAAAAACCACAAGTGCCATTTGATGCA...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp CCATTATTATTTCAGCAGCGAAGAGATAAATACCAGAGTAACCTCAGTCAGATGCCAATTCCCAAAGTTTaGATGATCACTAGGATATTG +
Preference number: 5 (lower is better)
Translates to: PLLFQQRRDKYQSNLSQMPIPKV*MITRIL
Trigger: CAATATCCTAGTGATCATCAAAACTTTGGGAATTGG...CATCTGACTGAGGTTACTCTGGTATTTATCTCTTCGCTGCTGAAATAATAATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS-3UTR CAA 90 bp GTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGCTGCATCAAATGGCACTaGTGGTTTTTCAATGTTCTT +
Preference number: 5 (lower is better)
Translates to: VYYSLRKIVQVIQVRFMCCIKWH*WFFNVL
Trigger: AAGAACATTGAAAAACCACAAGTGCCATTTGATGCA...GCACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS-3UTR CAA 90 bp AGTTTATTACTCTCTCAGAAAAATAGTCCAGGTGATTCAAGTCAGGTTTATGTGGATTTCCCACAGGATTaGCCACATCATAAAATTCAT +
Preference number: 5 (lower is better)
Translates to: SLLLSQKNSPGDSSQVYVDFPQD*PHHKIH
Trigger: ATGAATTTTATGATGTGGCAAATCCTGTGGGAAATC...CACATAAACCTGACTTGAATCACCTGGACTATTTTTCTGAGAGAGTAATAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423795.5
ENST00000450913.6
CDS CCA 72 bp GGGTCGGGGGCAAAATCGCCGACGACAAGGGAACACTaGGCGACAGACCATGACCAGTTCAGCTTCACTTGG +
Preference number: 6 (lower is better)
Translates to: GSGAKSPTTREH*ATDHDQFSFTW
Trigger: CCAAGTGAAGCTGAACTGGTCATGGTCTGTCGCCCAGTGTTCCCTTGTCGTCGGCGATTTTGCCCCCGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000340646.9
ENST00000428526.5
ENST00000450913.6
ENST00000495036.5
CDS CAA 72 bp ACCCTCGGAGGGTCAGAGTCTGGTAGAAGAGACAGATaGCCACCACTAAGCCCACCAAGAAGGGTCGGGGGC +
Preference number: 6 (lower is better)
Translates to: TLGGSESGRRDR*PPLSPPRRVGG
Trigger: GCCCCCGACCCTTCTTGGTGGGCTTAGTGGTGGCAATCTGTCTCTTCTACCAGACTCTGACCCTCCGAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000340646.9
ENST00000428526.5
ENST00000450913.6
ENST00000495036.5
CDS CAA 90 bp GCTTCCTCGACCCTCGGAGGGTCAGAGTCTGGTAGAAGAGACAGATaGCCACCACTAAGCCCACCAAGAAGGGTCGGGGGCAAAATCGCC +
Preference number: 6 (lower is better)
Translates to: ASSTLGGSESGRRDR*PPLSPPRRVGGKIA
Trigger: GGCGATTTTGCCCCCGACCCTTCTTGGTGGGCTTAGTGGTGGCAATCTGTCTCTTCTACCAGACTCTGACCCTCCGAGGGTCGAGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000340646.9
ENST00000428526.5
ENST00000450913.6
ENST00000495036.5
CDS TCA 72 bp ATCGCCGACGACAAGGGAACACTGGGCGACAGACCATaGCCAGTTCAGCTTCACTTGGCCCCTGTCCACGTT +
Preference number: 6 (lower is better)
Translates to: IADDKGTLGDRP*PVQLHLAPVHV
Trigger: AACGTGGACAGGGGCCAAGTGAAGCTGAACTGGTCATGGTCTGTCGCCCAGTGTTCCCTTGTCGTCGGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310396.10
ENST00000340646.9
ENST00000428526.5
ENST00000495036.5
CDS CAA 72 bp GCAAAGCTTGGCCCTGCCTGCTCGTACAGGTGCACCTaGCACAGACACTTAGGAGTTTCCACTCCAATTGTC +
Preference number: 6 (lower is better)
Translates to: AKLGPACSYRCT*HRHLGVSTPIV
Trigger: GACAATTGGAGTGGAAACTCCTAAGTGTCTGTGCAAGGTGCACCTGTACGAGCAGGCAGGGCCAAGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000450913.6
CDS CAA 72 bp GGCTGCCAGGTTATTTCTCTCCAGTCACACGTCCTGTaGTCCGAACAACTAAGGCAAGGCACAATCCACTGG +
Preference number: 6 (lower is better)
Translates to: GCQVISLQSHVL*SEQLRQGTIHW
Trigger: CCAGTGGATTGTGCCTTGCCTTAGTTGTTCGGACAACAGGACGTGTGACTGGAGAGAAATAACCTGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000450913.6
ENST00000466055.1
CDS TCA 72 bp TCAGCAAACCACAATCCTGCACAAAACCACATGCTGTaGAGGCCTCAAACAAGGGCAGACTTGGGCGGTCTT +
Preference number: 6 (lower is better)
Translates to: SANHNPAQNHML*RPQTRADLGGL
Trigger: AAGACCGCCCAAGTCTGCCCTTGTTTGAGGCCTTCACAGCATGTGGTTTTGTGCAGGATTGTGGTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000450913.6
CDS GCA 72 bp GGCTTAGTTAGGACACCATATTGGCAGTTGTGGGGCTaGCAGGTTATTTCTCTCCAGTCACACGTCCTGTTG +
Preference number: 6 (lower is better)
Translates to: GLVRTPYWQLWG*QVISLQSHVLL
Trigger: CAACAGGACGTGTGACTGGAGAGAAATAACCTGGCAGCCCCACAACTGCCAATATGGTGTCCTAACTAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000450913.6
ENST00000466055.1
CDS CCA 72 bp GGATTGTGTCTTCAATTACGGCTTCTAGGAACTCTCTaGACATCGACACCCAACTTCCTTCCTCCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: GLCLQLRLLGTL*TSTPNFLPPRH
Trigger: GTGCCTGGGAGGAAGGAAGTTGGGTGTCGATGTCCAGAGAGTTCCTAGAAGCCGTAATTGAAGACACAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000423795.5
ENST00000450913.6
ENST00000466055.1
CDS CAA 72 bp ACTGTTTGTCCTGAGAGAATCCTTTCTTGCATCTGCTaGCCTGGGTTTCAGTGGATGTGTGTGGGACAGCCC +
Preference number: 6 (lower is better)
Translates to: TVCPERILSCIC*PGFQWMCVGQP
Trigger: GGGCTGTCCCACACACATCCACTGAAACCCAGGCAAGCAGATGCAAGAAAGGATTCTCTCAGGACAAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000340646.9
ENST00000428526.5
ENST00000450913.6
ENST00000495036.5
CDS CCA 72 bp ACCACATGCTGTGAAGGCCTCAAACAAGGGCAGACTTaGGCGGTCTTCTCTATAGATGGTGAGTTTGTACGT +
Preference number: 6 (lower is better)
Translates to: TTCCEGLKQGQT*AVFSIDGEFVR
Trigger: ACGTACAAACTCACCATCTATAGAGAAGACCGCCCAAGTCTGCCCTTGTTTGAGGCCTTCACAGCATGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000450913.6
CDS TCA 72 bp TCTTTGGTGGATTCCAAACTGTGCCCGTCGAATGAATaGATGCACGCAAAGGGGTTAAGGACGTCACCAACA +
Preference number: 6 (lower is better)
Translates to: SLVDSKLCPSNE*MHAKGLRTSPT
Trigger: TGTTGGTGACGTCCTTAACCCCTTTGCGTGCATTCATTCATTCGACGGGCACAGTTTGGAATCCACCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000428526.5
ENST00000443817.1
ENST00000450913.6
CDS CAA 90 bp GAGACCAGTATTGGGTCAGGACTGAGCCAGGATTTCCCACAGGATTaGCCACATCATAAAATTCATGCATCAGTGACTGAATCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: ETSIGSGLSQDFPQD*PHHKIHASVTESQE
Trigger: CTCCTGGGATTCAGTCACTGATGCATGAATTTTATGATGTGGCAAATCCTGTGGGAAATCCTGGCTCAGTCCTGACCCAATACTGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000428526.5
ENST00000443817.1
ENST00000450913.6
CDS TCA 72 bp TTTTTCTTTGGTGGATTCCAAACTGTGCCCGTCGAATaGATGAATGCACGCAAAGGGGTTAAGGACGTCACC +
Preference number: 6 (lower is better)
Translates to: FFFGGFQTVPVE*MNARKGVKDVT
Trigger: GGTGACGTCCTTAACCCCTTTGCGTGCATTCATTCATTCGACGGGCACAGTTTGGAATCCACCAAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000428526.5
ENST00000443817.1
ENST00000450913.6
CDS CCA 72 bp AAGGACAGCGTTTTCACTGTCTCTGAAGCACAGACCTaGAAGCTCCTACTCACAGTACTGATTGAAAAGGAG +
Preference number: 6 (lower is better)
Translates to: KDSVFTVSEAQT*KLLLTVLIEKE
Trigger: CTCCTTTTCAATCAGTACTGTGAGTAGGAGCTTCCAGGTCTGTGCTTCAGAGACAGTGAAAACGCTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520801.5
CDS CCA 72 bp GGAAGTTGCAGTTCATTGTCTTCCTATTCCATCCTCTaGCAGTCAGCACTTAGCTTCTCCTCAAATGAAAGG +
Preference number: 6 (lower is better)
Translates to: GSCSSLSSYSIL*QSALSFSSNER
Trigger: CCTTTCATTTGAGGAGAAGCTAAGTGCTGACTGCCAGAGGATGGAATAGGAAGACAATGAACTGCAACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443817.1
CDS TCA 72 bp CACAGGATTTGCCACATCATAAAATTCATGCATCAGTaGCTGAATCCCAGGAGTAGTAGATGGGAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: HRICHIIKFMHQ*LNPRSSRWEEQ
Trigger: CTGCTCTTCCCATCTACTACTCCTGGGATTCAGTCACTGATGCATGAATTTTATGATGTGGCAAATCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000428526.5
ENST00000443817.1
ENST00000450913.6
CDS TCA 72 bp GAAGAAATAGGCTGTAACCCACAGGTTTCCTCTGGATaGATCAGCAAACCACAATCCTGCACAAAACCACAT +
Preference number: 6 (lower is better)
Translates to: EEIGCNPQVSSG*ISKPQSCTKPH
Trigger: ATGTGGTTTTGTGCAGGATTGTGGTTTGCTGATTCATCCAGAGGAAACCTGTGGGTTACAGCCTATTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000450913.6
CDS GCA 72 bp TCACATCTTTCAACTCACAGTAAAGGAGTCCGACTCTaGCTCAGCTTTGCAGGAAGAGAGAAAACAATACCA +
Preference number: 6 (lower is better)
Translates to: SHLSTHSKGVRL*LSFAGREKTIP
Trigger: TGGTATTGTTTTCTCTCTTCCTGCAAAGCTGAGGCAGAGTCGGACTCCTTTACTGTGAGTTGAAAGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000428526.5
ENST00000495036.5
CDS GCA 72 bp ATGAATCAGCAAACCACAATCAGAAACTTCTCTGGATaGTGTCAGAAGCTAGGAAGACCCAATTCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: MNQQTTIRNFSG*CQKLGRPNSPA
Trigger: TGCAGGAGAATTGGGTCTTCCTAGCTTCTGACAGCATCCAGAGAAGTTTCTGATTGTGGTTTGCTGATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466055.1
CDS TCA 72 bp GAAGAAATAGGCTGTAACCCACAGGTTTCCTCTGGATaGATCAGCAAACCACAATCAGAAACTTCTCTGGAT +
Preference number: 6 (lower is better)
Translates to: EEIGCNPQVSSG*ISKPQSETSLD
Trigger: ATCCAGAGAAGTTTCTGATTGTGGTTTGCTGATTCATCCAGAGGAAACCTGTGGGTTACAGCCTATTTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466055.1
CDS TCA 72 bp GAGGTGTTCAAGTGCATTTTCAAATGTTGGTCTCAATaGAGGGCTTATCCAGAACTGGGGATAGTAGGAATA +
Preference number: 6 (lower is better)
Translates to: EVFKCIFKCWSQ*RAYPELGIVGI
Trigger: TATTCCTACTATCCCCAGTTCTGGATAAGCCCTTCATTGAGACCAACATTTGAAAATGCACTTGAACACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS CAA 72 bp GATGTTTCACTGAATACTTCAGCCGCTAGCAGTAGTTaGCCAATTGCTTCCTTCATAATGTCAAAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: DVSLNTSAASSS*PIASFIMSKAC
Trigger: ACAGGCTTTTGACATTATGAAGGAAGCAATTGGCAAACTACTGCTAGCGGCTGAAGTATTCAGTGAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000428526.5
ENST00000443817.1
ENST00000450913.6
CDS CAA 72 bp ATCTTTGCAAGAGGTGTTCAAGTGCATTTTCAAATGTaGGTCTCAATGAAGGGCTTATCCAGAACTGGGGAT +
Preference number: 6 (lower is better)
Translates to: IFARGVQVHFQM*VSMKGLSRTGD
Trigger: ATCCCCAGTTCTGGATAAGCCCTTCATTGAGACCAACATTTGAAAATGCACTTGAACACCTCTTGCAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS TCA 72 bp CTCTGTGTTAAGAAATGTACTCCATCCACTGGCAGATaGAATCCAATTCCCAAAGTTTTGATGATCACTAGG +
Preference number: 6 (lower is better)
Translates to: LCVKKCTPSTGR*NPIPKVLMITR
Trigger: CCTAGTGATCATCAAAACTTTGGGAATTGGATTTCATCTGCCAGTGGATGGAGTACATTTCTTAACACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310396.10
CDS TCA 72 bp TTAAATGCTCGTGTACCTGGAGCACTACAGGGTACATaGAACTGCCATAACCAATATCAAAAGTTAGAAGTT +
Preference number: 6 (lower is better)
Translates to: LNARVPGALQGT*NCHNQYQKLEV
Trigger: AACTTCTAACTTTTGATATTGGTTATGGCAGTTTCATGTACCCTGTAGTGCTCCAGGTACACGAGCATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310396.10
ENST00000423795.5
ENST00000428526.5
ENST00000443817.1
ENST00000450913.6