RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPEB4 (Homo sapiens)

Ensembl gene IDs: ENSG00000113742

Ensembl transcript IDs: ENST00000265085.10, ENST00000334035.9, ENST00000517880.1, ENST00000518141.1, ENST00000519152.5, ENST00000519467.1, ENST00000519835.5, ENST00000520867.5, ENST00000522336.5, ENST00000522344.1, ENST00000656232.1, ENST00000657000.1, ENST00000659882.1

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATATCGTTCCACTCTTTCCCCATTCTGGTGACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAGAGGCTGATCCCCACGGCCATCATC +
Preference number: 1 (lower is better)
Translates to: ISFHSFPILVTEAVR*TQATMKRLIPTAII
Trigger: GATGATGGCCGTGGGGATCAGCCTCTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGGAAAGAGTGGAACGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659882.1
3UTR CCA 90 bp CTGGGGTTTCCTCAAGGCCCTTCATTGAATGCTCAACGTAAGGTTTaGGAATTGCCAGATGAGAGAAAGGGGAAGCTGTCCAGCCTGCCC +
Preference number: 1 (lower is better)
Translates to: LGFPQGPSLNAQRKV*ELPDERKGKLSSLP
Trigger: GGGCAGGCTGGACAGCTTCCCCTTTCTCTCATCTGGCAATTCCCAAACCTTACGTTGAGCATTCAATGAAGGGCCTTGAGGAAACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR TCA 90 bp ACACCTTTCGAGAATATCGTTCCACTCTTTCCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCAGGCCACTATGAAGAGGCTGATCCC +
Preference number: 1 (lower is better)
Translates to: TPFENIVPLFPHSGD*SSEVNPGHYEEADP
Trigger: GGGATCAGCCTCTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659882.1
3UTR TCA 90 bp ACATCTCCAGTGTCCCATCCCTGGGGTTTCCTCAAGGCCCTTCATTaGATGCTCAACGTAAGGTTTGGGAATTGCCAGATGAGAGAAAGG +
Preference number: 1 (lower is better)
Translates to: TSPVSHPWGFLKALH*MLNVRFGNCQMRER
Trigger: CCTTTCTCTCATCTGGCAATTCCCAAACCTTACGTTGAGCATTCAATGAAGGGCCTTGAGGAAACCCCAGGGATGGGACACTGGAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR TCA 90 bp ATAGCCCAGGAAGCCTCTTACACCCTTTCCAGACACACCATTCTGTaGTTTAAAACACCCAAAGCAATGCACCTATGTAATTTCAAGATA +
Preference number: 1 (lower is better)
Translates to: IAQEASYTLSRHTIL*FKTPKAMHLCNFKI
Trigger: TATCTTGAAATTACATAGGTGCATTGCTTTGGGTGTTTTAAATCACAGAATGGTGTGTCTGGAAAGGGTGTAAGAGGCTTCCTGGGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR GCA 90 bp GTTTTTCACTTTTGTTGGGCATTTGGCCTTCAACTGATAACTGAATaGTTAGATCCTGGGCTTACTCCCTGTATACATATTGAAGGCTAC +
Preference number: 1 (lower is better)
Translates to: VFHFCWAFGLQLITE*LDPGLTPCIHIEGY
Trigger: GTAGCCTTCAATATGTATACAGGGAGTAAGCCCAGGATCTAAGCATTCAGTTATCAGTTGAAGGCCAAATGCCCAACAAAAGTGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR TCA 90 bp TGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTaGCACAAGAATCTACAAAACACCTATATTATAGGTCATTCTTTT +
Preference number: 1 (lower is better)
Translates to: CNPMAIRKRSSYCLQ*HKNLQNTYIIGHSF
Trigger: AAAAGAATGACCTATAATATAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
3UTR TCA 90 bp GCTCCCTTTCTATGTTTGAATATTAGACAGCAAATGCCTCCATTTTaGCCTTTGGAACTTAACAGGTATAGTTCATTAAAGCCTGTATTA +
Preference number: 1 (lower is better)
Translates to: APFLCLNIRQQMPPF*PLELNRYSSLKPVL
Trigger: TAATACAGGCTTTAATGAACTATACCTGTTAAGTTCCAAAGGTCAAAATGGAGGCATTTGCTGTCTAATATTCAAACATAGAAAGGGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR CAA 90 bp CACATCTCCAGTGTCCCATCCCTGGGGTTTCCTCAAGGCCCTTCATaGAATGCTCAACGTAAGGTTTGGGAATTGCCAGATGAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: HISSVPSLGFPQGPS*NAQRKVWELPDERK
Trigger: CTTTCTCTCATCTGGCAATTCCCAAACCTTACGTTGAGCATTCAATGAAGGGCCTTGAGGAAACCCCAGGGATGGGACACTGGAGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR-3UTR CCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGGTTCCACAGCAGTGCTaGGGCAAGTCTTTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRVPQQC*GKSLVL
Trigger: CAAAACCAAAGACTTGCCCCAGCACTGCTGTGGAAC...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR CCA 90 bp AATGGTCGAGGAACACCACCAACAAATATAGTTTTTCGTGGGTCAAGTGGCTGTAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 2 (lower is better)
Translates to: NGRGTPPTNIVFRGSSGCRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...ACAGCCACTTGACCCACGAAAAACTATATTTGTTGGTGGTGTTCCTCGACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656232.1
3UTR-3UTR TCA 90 bp AATGGTCGAGGAACACCACCAACAAATATAGTTTTTCGTGGGTCAAGTGGCTGTCAATGCATGCATCAATaGGAGCCTGCACAGAGCTTT +
Preference number: 2 (lower is better)
Translates to: NGRGTPPTNIVFRGSSGCQCMHQ*EPAQSF
Trigger: AAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG...ACAGCCACTTGACCCACGAAAAACTATATTTGTTGGTGGTGTTCCTCGACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656232.1
3UTR-3UTR GCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCTGCTACAAAAGGACATaGCAGCGTGAAGAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGCYKRT*QREEVE
Trigger: CTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
3UTR-3UTR GCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCTGCTACAAAAGGACATaGCAGCGTGAAGAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSCYKRT*QREEVE
Trigger: CTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
3UTR-3UTR GCA 90 bp CCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCATGCTACAAAAGGACATaGCAGCGTGAAGAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: PLGFQQNKRIKLPCNPMACYKRT*QREEVE
Trigger: CTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA...TGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
3UTR-3UTR GCA 90 bp CACCTTTCGAGAATATCGTTCCACTCTTTCCCCATTCTGGTGACTGAAGCAGTGTCGCCCATATGTCCTTaGTGCATGTCAAATGAGAAA +
Preference number: 2 (lower is better)
Translates to: HLSRISFHSFPILVTEAVSPICP*CMSNEK
Trigger: TTTCTCATTTGACATGCAGCAAGGACATATGGGCGA...CACTGCTTCAGTCACCAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659882.1
3UTR-3UTR GCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTTACACCAATAGCTGGTaGTGGGGAAGGATGTTTAAG +
Preference number: 2 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFYTNSW*WGRMFK
Trigger: CTTAAACATCCTTCCCCAGCACCAGCTATTGGTGTA...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR CCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGATGTTGCAGGAAGTTTaGATCCTCTTGGTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGMLQEV*ILLVSS
Trigger: GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACAT...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR TCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGGCAAGTCTTTGGTTTTaGAGGATCCAAGATGGTACT +
Preference number: 2 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGASLWF*RIQDGT
Trigger: AGTACCATCTTGGATCCTTCAAAACCAAAGACTTGC...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR GCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTTGCTACAAAAGGACATaGCAGCGTGAAGAGGTTGAG +
Preference number: 2 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSCYKRT*QREEVE
Trigger: CTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
3UTR-3UTR TCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTAGGAAGGGGTCAGAATaGACAGAAGAGTGCACTTAT +
Preference number: 2 (lower is better)
Translates to: PDGNTKKEFILFAVTQESRKGSE*TEECTY
Trigger: ATAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCT...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
3UTR-3UTR GCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTGCTTATGCATTTGTTTaGTCTAACATGCTCTTTCCA +
Preference number: 2 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFAYAFV*SNMLFP
Trigger: TGGAAAGAGCATGTTAGAGCAAACAAATGCATAAGC...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR TCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTAGGAAGGGGTCAGAATaGACAGAAGAGTGCACTTAT +
Preference number: 2 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFRKGSE*TEECTY
Trigger: ATAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCT...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
3UTR-3UTR TCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTAAGGAAGGGGTCAGAATaGACAGAAGAGTGCACTTAT +
Preference number: 2 (lower is better)
Translates to: TKKEFILFAVTQESTKHLRKGSE*TEECTY
Trigger: ATAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCT...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
3UTR-3UTR TCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATCAAATGCCTCCATTTTaGCCTTTGGAACTTAACAGG +
Preference number: 2 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYQMPPF*PLELNR
Trigger: CCTGTTAAGTTCCAAAGGTCAAAATGGAGGCATTTG...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR CCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTATGTTGCAGGAAGTTTaGATCCTCTTGGTTTCCAGC +
Preference number: 2 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFMLQEV*ILLVSS
Trigger: GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACAT...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
3UTR-3UTR TCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATCTTGGTGAATTGAAGTaGTGCCCTACAATCTGTAAA +
Preference number: 2 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYLGELK*CPTICK
Trigger: TTTACAGATTGTAGGGCATCACTTCAATTCACCAAG...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR GCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATAGAATAAAACTTCCATaGAACCCGATGGCAATACGA +
Preference number: 2 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYRIKLP*NPMAIR
Trigger: TCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCT...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR CCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATTTTTTAACGTCAAAATaGAGAGCAAAGGCTGACATC +
Preference number: 2 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYFLTSK*RAKADI
Trigger: GATGTCAGCCTTTGCTCTCCATTTTGACGTTAAAAA...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR TCA 72 bp CACTCTTTCCCCATTCTGGTGACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAGAGGCTGATCCCCACG +
Preference number: 3 (lower is better)
Translates to: HSFPILVTEAVR*TQATMKRLIPT
Trigger: CGTGGGGATCAGCCTCTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGGAAAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659882.1
3UTR TCA 72 bp GTGTCCCATCCCTGGGGTTTCCTCAAGGCCCTTCATTaGATGCTCAACGTAAGGTTTGGGAATTGCCAGATG +
Preference number: 3 (lower is better)
Translates to: VSHPWGFLKALH*MLNVRFGNCQM
Trigger: CATCTGGCAATTCCCAAACCTTACGTTGAGCATTCAATGAAGGGCCTTGAGGAAACCCCAGGGATGGGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR CCA 72 bp ATAGGGGTCATAAGCCAGGTGGTTCCACAGCAGTGCTaGGGCAAGTCTTTGGTTTTGAAGGATCCAAGATGG +
Preference number: 3 (lower is better)
Translates to: IGVISQVVPQQC*GKSLVLKDPRW
Trigger: CCATCTTGGATCCTTCAAAACCAAAGACTTGCCCCAGCACTGCTGTGGAACCACCTGGCTTATGACCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR TCA 72 bp GAGAATATCGTTCCACTCTTTCCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCAGGCCACTATGAAGAG +
Preference number: 3 (lower is better)
Translates to: ENIVPLFPHSGD*SSEVNPGHYEE
Trigger: CTCTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGGAAAGAGTGGAACGATATTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659882.1
3UTR CCA 72 bp CCTCAAGGCCCTTCATTGAATGCTCAACGTAAGGTTTaGGAATTGCCAGATGAGAGAAAGGGGAAGCTGTCC +
Preference number: 3 (lower is better)
Translates to: PQGPSLNAQRKV*ELPDERKGKLS
Trigger: GGACAGCTTCCCCTTTCTCTCATCTGGCAATTCCCAAACCTTACGTTGAGCATTCAATGAAGGGCCTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR-3UTR CAA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGGAAGTTTGGATCCTCTaGGTTTCCAGCAAAACAAGA +
Preference number: 3 (lower is better)
Translates to: TSYTRAPSIRMTAFSICREVWIL*VSSKTR
Trigger: TCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTTC...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR-3UTR CAA 90 bp GGAACACCACCAACAAATATAGTTTTTCGTGGGTCAAGTGGCTGTGAACCATCCCACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 3 (lower is better)
Translates to: GTPPTNIVFRGSSGCEPSHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...GGATGGTTCACAGCCACTTGACCCACGAAAAACTATATTTGTTGGTGGTGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656232.1
3UTR-3UTR CAA 90 bp AATGGTCGAGGAACACCACCAACAAATATAGTTTTTCGTGGGTCAAGTGGCTGTTGGACTGGCTTATCCTaGATAGTGGGACTTGATACA +
Preference number: 3 (lower is better)
Translates to: NGRGTPPTNIVFRGSSGCWTGLS*IVGLDT
Trigger: TGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA...ACAGCCACTTGACCCACGAAAAACTATATTTGTTGGTGGTGTTCCTCGACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656232.1
3UTR TCA 72 bp TCACTTTTGTTGGGCATTTGGCCTTCAACTGATAACTaGATGCTTAGATCCTGGGCTTACTCCCTGTATACA +
Preference number: 3 (lower is better)
Translates to: SLLLGIWPSTDN*MLRSWAYSLYT
Trigger: TGTATACAGGGAGTAAGCCCAGGATCTAAGCATTCAGTTATCAGTTGAAGGCCAAATGCCCAACAAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR-3UTR CAA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGGTCTTGCTTATGCATTaGTTTGCTCTAACATGCTCT +
Preference number: 3 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGVLLMH*FALTCS
Trigger: AGAGCATGTTAGAGCAAACAAATGCATAAGCAAGAC...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR TCA 72 bp GAAGCCTCTTACACCCTTTCCAGACACACCATTCTGTaGTTTAAAACACCCAAAGCAATGCACCTATGTAAT +
Preference number: 3 (lower is better)
Translates to: EASYTLSRHTIL*FKTPKAMHLCN
Trigger: ATTACATAGGTGCATTGCTTTGGGTGTTTTAAATCACAGAATGGTGTGTCTGGAAAGGGTGTAAGAGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR TCA 72 bp AAGAATTTTCCTCGTTGGGTAGGTTTAGGCAATCAGTaGATGAAGAAATATAGCCCAGGAAGCCTCTTACAC +
Preference number: 3 (lower is better)
Translates to: KNFPRWVGLGNQ*MKKYSPGSLLH
Trigger: GTGTAAGAGGCTTCCTGGGCTATATTTCTTCATTCACTGATTGCCTAAACCTACCCAACGAGGAAAATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR GCA 72 bp TTTTGTTGGGCATTTGGCCTTCAACTGATAACTGAATaGTTAGATCCTGGGCTTACTCCCTGTATACATATT +
Preference number: 3 (lower is better)
Translates to: FCWAFGLQLITE*LDPGLTPCIHI
Trigger: AATATGTATACAGGGAGTAAGCCCAGGATCTAAGCATTCAGTTATCAGTTGAAGGCCAAATGCCCAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR CCA 72 bp ATAGACTATTTCTTAAATTATAGGTACACCAATAGCTaGTGCTGGGGAAGGATGTTTAAGCAACATGCTTTC +
Preference number: 3 (lower is better)
Translates to: IDYFLNYRYTNS*CWGRMFKQHAF
Trigger: GAAAGCATGTTGCTTAAACATCCTTCCCCAGCACCAGCTATTGGTGTACCTATAATTTAAGAAATAGTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
3UTR TCA 72 bp GGAAAGGACTATCCTAGTCCTCTGAAGATCACAGTCTaGAATATTAGAGTTTTGTCTTGTTTATTATTCGGT +
Preference number: 3 (lower is better)
Translates to: GKDYPSPLKITV*NIRVLSCLLFG
Trigger: ACCGAATAATAAACAAGACAAAACTCTAATATTTCAGACTGTGATCTTCAGAGGACTAGGATAGTCCTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR TCA 72 bp TGTCTTTTTCTTGTGGAAAGGACTATCCTAGTCCTCTaGAGATCACAGTCTGAAATATTAGAGTTTTGTCTT +
Preference number: 3 (lower is better)
Translates to: CLFLVERTILVL*RSQSEILEFCL
Trigger: AAGACAAAACTCTAATATTTCAGACTGTGATCTTCAGAGGACTAGGATAGTCCTTTCCACAAGAAAAAGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR GCA 72 bp GGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATaGTCCCGTTCTAATATTGGTAATCACACATTTAGA +
Preference number: 3 (lower is better)
Translates to: GKIVSCHFIVIK*SRSNIGNHTFR
Trigger: TCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGATCTCCTCACGGTTGCTaGGCCGTCGCCGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRSPHGC*AVAAVA
Trigger: GGCGACGGCGGCGACGGCCCAGCAACCGTGAGGAGA...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACGAGAGAGGCCCGATCTaGGGAGAGAAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHERGPI*GEKLPP
Trigger: TGGAGGCAGCTTCTCTCCTCAGATCGGGCCTCTCTC...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGTTCAGCCCTCTGCGGTaGTCTCGGCCTTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMFSPLR*SRPWEP
Trigger: AGGTTCCCAAGGCCGAGATCACCGCAGAGGGCTGAA...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTCAGCCCTCTGCGGTaGTCTCGGCCTTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHFSPLR*SRPWEP
Trigger: AGGTTCCCAAGGCCGAGATCACCGCAGAGGGCTGAA...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCATTCAGCCCTCTaGGGTGATCTCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVHHSAL*GDLGLG
Trigger: CCCAAGGCCGAGATCACCGCAGAGGGCTGAATGGTG...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGACCGAGGGGGCGACCTaGAAGGTCCTGCGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRTEGAT*KVLRFL
Trigger: CAGAAACCGCAGGACCTTCCAGGTCGCCCCCTCGGT...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACGCTTCCTCTCCCCCATaGAAGGGGTTGGAAACACCC +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHASSPP*KGLETP
Trigger: GGGTGTTTCCAACCCCTTTCATGGGGGAGAGGAAGC...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGGGGGTGGCATTTTGGTaGTGGTGTGGAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVGVAFW*WCGGCR
Trigger: TCTGCAGCCTCCACACCATCACCAAAATGCCACCCC...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAATGTGGGTGGTGCTGTaGGAGAGGCCCGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLMWVVL*ERPDLR
Trigger: CCTCAGATCGGGCCTCTCTCACAGCACCACCCACAT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGTTCAGCCCTCTGCGGTaGTCTCGGCCTTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRFSPLR*SRPWEP
Trigger: AGGTTCCCAAGGCCGAGATCACCGCAGAGGGCTGAA...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAAGGTCCTGCGGTTTCTaGCTCTTCCCCTCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLRSCGF*LFPSLR
Trigger: CCGCAGAGAGGGGAAGAGGCAGAAACCGCAGGACCT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGCAGCGGAATGAAATATaGCGAGGGCGGTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMQRNEI*RGRSPP
Trigger: AGGCGGTGACCGCCCTCGGCATATTTCATTCCGCTG...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGTCGCCGCTTTACCCTaGTCCCGCAGTCCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKVAALP*SRSPRC
Trigger: ACAGCGGGGACTGCGGGACCAGGGTAAAGCGGCGAC...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTTGCGGTCGCTGTTCCTaGGCTCCCCGCGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFCGRCS*APRGFL
Trigger: GAGGAAGCCGCGGGGAGCCCAGGAACAGCGACCGCA...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCGAGACTCGACGAGGGTaGGCGGGCGGCCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFETRRG*AGGLGV
Trigger: CACCCCCAGGCCGCCCGCTCACCCTCGTCGAGTCTC...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGCTCTGGGGCTGTTCCTaGGGCTCCGGGTGCAGATCT +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKLWGCS*GSGCRS
Trigger: AGATCTGCACCCGGAGCCTCAGGAACAGCCCCAGAG...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAGGGGTGGCATTTTGGTaGTGGTGTGGAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLGVAFW*WCGGCR
Trigger: TCTGCAGCCTCCACACCATCACCAAAATGCCACCCC...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHPHSGD*SSEVNP
Trigger: TGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGG...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVPHSGD*SSEVNP
Trigger: TGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGG...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCGTTTCTCCTCACGGTTaGTGGGCCGTCGCCGCCGTC +
Preference number: 4 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSVSPHG*WAVAAV
Trigger: GACGGCGGCGACGGCCCAGCAACCGTGAGGAGAAAC...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGACGACCTGGAAGGTCCTaGGGTTTCTGCCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRRPGRS*GFCLFP
Trigger: GGGGAAGAGGCAGAAACCGCAGGACCTTCCAGGTCG...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGAAGCTGACCCAGCACTaGTGCCATTGGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVKLTQH*CHWQLC
Trigger: ACACAGCTGCCAATGGCAGCAGTGCTGGGTCAGCTT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGACACCATTCAGCCCTCTaGGGTGATCTCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRHHSAL*GDLGLG
Trigger: CCCAAGGCCGAGATCACCGCAGAGGGCTGAATGGTG...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTACAGCGGAATGAAATATaGCGAGGGCGGTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLQRNEI*RGRSPP
Trigger: AGGCGGTGACCGCCCTCGGCATATTTCATTCCGCTG...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGGGGGATGGGGACTaGCAGGAGACCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRVGDGD*QETSFA
Trigger: AGCAAAGGAGGTCTCCTGCCAGTCCCCATCCCCCAC...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGTTCACCAGGGGCTTGTaGAATTCCCTGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVFTRGL*NSLPAR
Trigger: TCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAA...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTCACCAGGGGCTTGTaGAATTCCCTGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHFTRGL*NSLPAR
Trigger: TCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAA...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGAGGAAAAAGCCAAGCTaGCCCAGCACTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVRKKPS*PSTAAI
Trigger: AATGGCAGCAGTGCTGGGTCAGCTTGGCTTTTTCCT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACAGTATTCCAGCTTCCTaGCCTGGACTTGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHSIPAS*PGLGES
Trigger: GCTTTCCCCAAGTCCAGGTCAGGAAGCTGGAATACT...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGCCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRPHSGD*SSEVNP
Trigger: TGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGG...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACTATGAAGAGGCTGATCCCCACGGCCATCATCCAAGAATCCATCTTCCATTGGCCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: TMKRLIPTAIIQESIFHWPHSGD*SSEVNP
Trigger: TGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGG...CCAATGGAAGATGGATTCTTGGATGATGGCCGTGGGGATCAGCCTCTTCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659882.1
CDS-3UTR TCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGTCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVSPCCS*TKRALI
Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAGTTCCAGCGGAATaGAATATGCCGAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHLVPAE*NMPRAV
Trigger: GACCGCCCTCGGCATATTTCATTCCGCTGGAACTAA...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGCCTGGTCCTGTTTTCTaGTCTTTCGCAGGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMPGPVF*SFAGCS
Trigger: ACTGCACCCTGCGAAAGAGCAGAAAACAGGACCAGG...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCTGACCCAGCACTGCTaGCATTGGCAGCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVLTQHC*HWQLCY
Trigger: ATAACACAGCTGCCAATGGCAGCAGTGCTGGGTCAG...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGACAGCGGAATGAAATATaGCGAGGGCGGTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRQRNEI*RGRSPP
Trigger: AGGCGGTGACCGCCCTCGGCATATTTCATTCCGCTG...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGGTGGTTCCACAGCAGTaGTGGGGCAAGTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMVVPQQ*WGKSLV
Trigger: AACCAAAGACTTGCCCCAGCACTGCTGTGGAACCAC...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCCCCATGAAAGGGGTTaGAAACACCCGTTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVPHERG*KHPFLP
Trigger: AGGGAGAAACGGGTGTTTCCAACCCCTTTCATGGGG...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAGTGCAAAGGCAGAGCTaGGGCGAGCATACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLVQRQS*GEHTSG
Trigger: TCCAGAAGTATGCTCGCCCCAGCTCTGCCTTTGCAC...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACGCATGTCGAATGTCCTaGGGCGATCCGGAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHACRMS*GDPEKE
Trigger: TTCCTTTTCCGGATCGCCCCAGGACATTCGACATGC...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp TTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCATTCACCAGGGGCTTGTaGAATTCCCTGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: LQTATKGHASVKRLRKGSFTRGL*NSLPAR
Trigger: TCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAA...TGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACTTCACCAGGGGCTTGTaGAATTCCCTGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNFTRGL*NSLPAR
Trigger: TCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAA...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGGCGCTATCGCTGCTaGCCAGTTACTGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNRRYRC*PVTETS
Trigger: ACTGGTTTCAGTAACTGGTCAGCAGCGATAGCGCCT...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAAGGCGCTATCGCTGCTaGCCAGTTACTGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLRRYRC*PVTETS
Trigger: ACTGGTTTCAGTAACTGGTCAGCAGCGATAGCGCCT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCGAGAGAGGCCCGATCTaGGGAGAGAAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGERGPI*GEKLPP
Trigger: TGGAGGCAGCTTCTCTCCTCAGATCGGGCCTCTCTC...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: LQTATKGHASVKRLRKGSTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...TGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACTATGAAGAGGCTGATCCCCACGGCCATCATCCAAGAATCCATCTTCCATTGGACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: TMKRLIPTAIIQESIFHWTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...CCAATGGAAGATGGATTCTTGGATGATGGCCGTGGGGATCAGCCTCTTCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659882.1
CDS-3UTR TCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGACCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRPHSGD*SSEVNP
Trigger: TGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGG...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTATCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLSPCCS*TKRALI
Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACTCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNSPCCS*TKRALI
Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCATTAGTTCCAGCGGAATaGAATATGCCGAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LQTATKGHASVKRLRKGSLVPAE*NMPRAV
Trigger: GACCGCCCTCGGCATATTTCATTCCGCTGGAACTAA...TGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTACTGACCCAGCACTGCTaGCATTGGCAGCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLLTQHC*HWQLCY
Trigger: ATAACACAGCTGCCAATGGCAGCAGTGCTGGGTCAG...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAAAGCTGACCCAGCACTaGTGCCATTGGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRKLTQH*CHWQLC
Trigger: ACACAGCTGCCAATGGCAGCAGTGCTGGGTCAGCTT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCCACCATTCAGCCCTCTaGGGTGATCTCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSHHSAL*GDLGLG
Trigger: CCCAAGGCCGAGATCACCGCAGAGGGCTGAATGGTG...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGACATCCAGGATTTAGGTaGAAAGGCAGAGCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRHPGFR*KGRAGA
Trigger: CGCCCCAGCTCTGCCTTTGCACCTAAATCCTGGATG...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACGAACTCTCCAGTGAGTaGATGTCGAATGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNELSSE*MSNVLG
Trigger: CCCCAGGACATTCGACATGCACTCACTGGAGAGTTC...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000522336.5
CDS-3UTR GCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAGAACTCTCCAGTGAGTaGATGTCGAATGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLELSSE*MSNVLG
Trigger: CCCCAGGACATTCGACATGCACTCACTGGAGAGTTC...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000520867.5
ENST00000522336.5
CDS-3UTR CCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTGTGGGGGATGGGGACTaGCAGGAGACCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFVGDGD*QETSFA
Trigger: AGCAAAGGAGGTCTCCTGCCAGTCCCCATCCCCCAC...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp CCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAGTGGGGGATGGGGACTaGCAGGAGACCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PLGFQQNKRIKLPCNPMAVGDGD*QETSFA
Trigger: AGCAAAGGAGGTCTCCTGCCAGTCCCCATCCCCCAC...TGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCTGCCAGCACGAGAATaGATAGCAGCCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVLPARE*IAAQQY
Trigger: ATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAG...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGATTCACCAGGGGCTTGTaGAATTCCCTGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRFTRGL*NSLPAR
Trigger: TCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAA...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTCCCCGCTGTCGTTGTTaGGGACTCCTCCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFPRCRC*GLLLVL
Trigger: AAGAACCAGGAGGAGTCCTCAACAACGACAGCGGGG...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCGGGGTGGCATTTTGGTaGTGGTGTGGAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGGVAFW*WCGGCR
Trigger: TCTGCAGCCTCCACACCATCACCAAAATGCCACCCC...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCCCAAGATCTCATCCTaGATGTTATGGGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHPKISS*MLWVAG
Trigger: TCCAGCTACCCATAACATTCAGGATGAGATCTTGGG...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGGGACCCCTCCCTGGTaGAAGAAACTTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRGTPPW*KKLASS
Trigger: TGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCC...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTACTCCAAAGCCAGGGCTaGCATGATGGGGGAAATTTT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLLQSQG*HDGGNF
Trigger: AAAATTTCCCCCATCATGTCAGCCCTGGCTTTGGAG...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGCAATGCATGCATCAATaGGAGCCTGCACAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMQCMHQ*EPAQSF
Trigger: AAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCAATGCATGCATCAATaGGAGCCTGCACAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHQCMHQ*EPAQSF
Trigger: AAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGATTAGTTCCAGCGGAATaGAATATGCCGAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRLVPAE*NMPRAV
Trigger: GACCGCCCTCGGCATATTTCATTCCGCTGGAACTAA...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCACTCCTCTTCCTCCTCTaGTGTCGCCGCTGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSLLFLL*CRRCCR
Trigger: GCGGCAGCAGCGGCGACAGCAGAGGAGGAAGAGGAG...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTTGCTCTTTCGCAGGGTaGAGTTTTGGCCTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFCSFAG*SFGLWG
Trigger: GCCCCAGAGGCCAAAACTGCACCCTGCGAAAGAGCA...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTCCCAGTATTGCTTTaGACTAGCACTCCAAACCCG +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHFPVLL*TSTPNP
Trigger: CGGGTTTGGAGTGCTAGTGCAAAGCAATACTGGGAA...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGAACTCTCCAGTGAGTaGATGTCGAATGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRELSSE*MSNVLG
Trigger: CCCCAGGACATTCGACATGCACTCACTGGAGAGTTC...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000520867.5
ENST00000522336.5
CDS-3UTR GCA 90 bp CCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCACAGCGGAATGAAATATaGCGAGGGCGGTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: PLGFQQNKRIKLPCNPMAQRNEI*RGRSPP
Trigger: AGGCGGTGACCGCCCTCGGCATATTTCATTCCGCTG...TGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCTAGATGTCAAGGGTTaGGTTGAAGTACCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVLDVKG*VEVPSP
Trigger: TGGGCTAGGTACTTCAACCCAACCCTTGACATCTAG...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTCTTCAAAGGCGAGATaGAGTTCAGGGGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHSSKAR*SSGALF
Trigger: GAATAACGCCCCTGAACTCCATCTCGCCTTTGAAGA...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp CTGTCACTGAGATTCCAAGGCCGAATCTGGACTGGCTTATCCTTGATAGTGGGAAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSLRFQGRIWTGLSLIVGRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...TCCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCTTGGAATCTCAGTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656232.1
3UTR CAA 72 bp AGTGTCCCATCCCTGGGGTTTCCTCAAGGCCCTTCATaGAATGCTCAACGTAAGGTTTGGGAATTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SVPSLGFPQGPS*NAQRKVWELPD
Trigger: ATCTGGCAATTCCCAAACCTTACGTTGAGCATTCAATGAAGGGCCTTGAGGAAACCCCAGGGATGGGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTACCCAAGATCTCATCCTaGATGTTATGGGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLPKISS*MLWVAG
Trigger: TCCAGCTACCCATAACATTCAGGATGAGATCTTGGG...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGACCCCTCCCTGGTaGAAGAAACTTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKGTPPW*KKLASS
Trigger: TGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCC...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHLLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp CTGTCACTGAGATTCCAAGGCCGAATCTGGACTGGCTTATCCTTGATAGTGGGACAATGCATGCATCAATaGGAGCCTGCACAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSLRFQGRIWTGLSLIVGQCMHQ*EPAQSF
Trigger: AAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG...TCCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCTTGGAATCTCAGTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656232.1
CDS-3UTR TCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGAGGAAGGGGTCAGAATaGACAGAAGAGTGCACTTAT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVRKGSE*TEECTY
Trigger: ATAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACCACCCTCCATTCGCATaGCTGCTTTCAGTATTTGCA +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNHPPFA*LLSVFA
Trigger: TGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTG...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCCTTCAACTGATAACTaGATGCTTAGATCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVPSTDN*MLRSWA
Trigger: AGCCCAGGATCTAAGCATTCAGTTATCAGTTGAAGG...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp CCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAAAGCTGACCCAGCACTaGTGCCATTGGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: PLGFQQNKRIKLPCNPMAKLTQH*CHWQLC
Trigger: ACACAGCTGCCAATGGCAGCAGTGCTGGGTCAGCTT...TGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCTCCATTCGCATGACTaGTTTCAGTATTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVLHSHD*FQYLQG
Trigger: TCCCTGCAAATACTGAAAGCAGTCATGCGAATGGAG...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTCGCAGGGTGCAGTTTTaGCCTCTGGGGCTGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSRRVQF*PLGLFL
Trigger: CAGGAACAGCCCCAGAGGCCAAAACTGCACCCTGCG...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACCTAGATGTCAAGGGTTaGGTTGAAGTACCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNLDVKG*VEVPSP
Trigger: TGGGCTAGGTACTTCAACCCAACCCTTGACATCTAG...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCATCTTCAAAGGCGAGATaGAGTTCAGGGGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: LQTATKGHASVKRLRKGSSSKAR*SSGALF
Trigger: GAATAACGCCCCTGAACTCCATCTCGCCTTTGAAGA...TGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGCATGTCGAATGTCCTaGGGCGATCCGGAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKACRMS*GDPEKE
Trigger: TTCCTTTTCCGGATCGCCCCAGGACATTCGACATGC...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCAGGAAAAAGCCAAGCTaGCCCAGCACTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSRKKPS*PSTAAI
Trigger: AATGGCAGCAGTGCTGGGTCAGCTTGGCTTTTTCCT...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTAGTATTCCAGCTTCCTaGCCTGGACTTGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFSIPAS*PGLGES
Trigger: GCTTTCCCCAAGTCCAGGTCAGGAAGCTGGAATACT...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGATGTGGGTGGTGCTGTaGGAGAGGCCCGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWMWVVL*ERPDLR
Trigger: CCTCAGATCGGGCCTCTCTCACAGCACCACCCACAT...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGAGATTATTCGCCAAATaGGGCAGCTGGTTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVRLFAK*GSWLKA
Trigger: TGCTTTTAACCAGCTGCCTCATTTGGCGAATAATCT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCTCTCATTATGTCAATaGGTGAACTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHLSLCQ*VNSPVS
Trigger: ACTCACTGGAGAGTTCACTCATTGACATAATGAGAG...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000520867.5
ENST00000522336.5
CDS-3UTR TCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGCCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTPHSGD*SSEVNP
Trigger: TGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGG...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGTTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRLLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCATTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: LQTATKGHASVKRLRKGSLLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...TGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCTCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA +
Preference number: 4 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSSPCCS*TKRALI
Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCTTAGTTCCAGCGGAATaGAATATGCCGAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGLVPAE*NMPRAV
Trigger: GACCGCCCTCGGCATATTTCATTCCGCTGGAACTAA...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGCAAATGCCTCCATTTTaGCCTTTGGAACTTAACAGG +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMQMPPF*PLELNR
Trigger: CCTGTTAAGTTCCAAAGGTCAAAATGGAGGCATTTG...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACACAAAGACTCAAAACTaGACCTCCCAGATACGGACT +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNTKTQN*TSQIRT
Trigger: AGTCCGTATCTGGGAGGTTCAGTTTTGAGTCTTTGT...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGATTCCCAGTATTGCTTTaGACTAGCACTCCAAACCCG +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRFPVLL*TSTPNP
Trigger: CGGGTTTGGAGTGCTAGTGCAAAGCAATACTGGGAA...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAACCAGTAAGAGACGATaGGCTAGATGTCAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRTSKRR*ARCQGL
Trigger: CAACCCTTGACATCTAGCGCATCGTCTCTTACTGGT...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAACCAGTAAGAGACGATaGGCTAGATGTCAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRTSKRR*ARCQGL
Trigger: CAACCCTTGACATCTAGCGCATCGTCTCTTACTGGT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGCATCCAGGATTTAGGTaGAAAGGCAGAGCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTHPGFR*KGRAGA
Trigger: CGCCCCAGCTCTGCCTTTGCACCTAAATCCTGGATG...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAACTCTCCAGTGAGTaGATGTCGAATGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGELSSE*MSNVLG
Trigger: CCCCAGGACATTCGACATGCACTCACTGGAGAGTTC...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCCAGCGGAATGAAATATaGCGAGGGCGGTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIQRNEI*RGRSPP
Trigger: AGGCGGTGACCGCCCTCGGCATATTTCATTCCGCTG...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACTACACCAATAGCTGGTaGTGGGGAAGGATGTTTAAG +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNYTNSW*WGRMFK
Trigger: CTTAAACATCCTTCCCCAGCACCAGCTATTGGTGTA...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGTTAGGTTATCTGGGGTaGGAAGTGAATTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMLGYLG*EVNSWF
Trigger: AAACCAGGAATTCACTTCCCACCCCAGATAACCTAA...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGGCTGCAGATGTGGATaGAATCTGACTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRGCRCG*NLTGKA
Trigger: TGCTTTTCCAGTCAGATTCCATCCACATCTGCAGCC...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAAATGTTATGGGTAGCTaGAGCAGGAAAAAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLNVMGS*SRKKPS
Trigger: GCTTGGCTTTTTCCTGCTCCAGCTACCCATAACATT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGAAGTACCTAGCCCAGTaGCTTCTTGATAATCAAACC +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVKYLAQ*LLDNQT
Trigger: GGTTTGATTATCAAGAAGCCACTGGGCTAGGTACTT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGGTGCAAAGGCAGAGCTaGGGCGAGCATACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTVQRQS*GEHTSG
Trigger: TCCAGAAGTATGCTCGCCCCAGCTCTGCCTTTGCAC...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCGCATGTCGAATGTCCTaGGGCGATCCGGAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGACRMS*GDPEKE
Trigger: TTCCTTTTCCGGATCGCCCCAGGACATTCGACATGC...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGATCTTCATCAATGTCTaGAGGCAATCCGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVIFINV*RQSAYK
Trigger: TTTGTAGGCGGATTGCCTCCAGACATTGATGAAGAT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGTTCACCAGGGGCTTGTaGAATTCCCTGCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTFTRGL*NSLPAR
Trigger: TCGTGCTGGCAGGGAATTCCACAAGCCCCTGGTGAA...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGTTCCATGCAACCCGATaGCAATACGAAAAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMFHATR*QYEKGV
Trigger: AACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAA...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAATGTTGCAGGAAGTTTaGATCCTCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLMLQEV*ILLVSS
Trigger: GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACAT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAATGTTGCAGGAAGTTTaGATCCTCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQTATKGHASVKRLRKGSMLQEV*ILLVSS
Trigger: GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACAT...TGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTCTCCAAAGCCAGGGCTaGCATGATGGGGGAAATTTT +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFLQSQG*HDGGNF
Trigger: AAAATTTCCCCCATCATGTCAGCCCTGGCTTTGGAG...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTGAGAGAGGCCCGATCTaGGGAGAGAAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRERGPI*GEKLPP
Trigger: TGGAGGCAGCTTCTCTCCTCAGATCGGGCCTCTCTC...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACCTCTCATTATGTCAATaGGTGAACTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNLSLCQ*VNSPVS
Trigger: ACTCACTGGAGAGTTCACTCATTGACATAATGAGAG...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000522336.5
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTACTCTCATTATGTCAATaGGTGAACTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLLSLCQ*VNSPVS
Trigger: ACTCACTGGAGAGTTCACTCATTGACATAATGAGAG...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000520867.5
ENST00000522336.5
CDS-3UTR TCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGATTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRLLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGCAATGCATGCATCAATaGGAGCCTGCACAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKQCMHQ*EPAQSF
Trigger: AAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp AATGGTCGAGGAACACCACCAACAAATATAGTTTTTCGTGGGTCAAGTGGCTGTTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: NGRGTPPTNIVFRGSSGCWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...ACAGCCACTTGACCCACGAAAAACTATATTTGTTGGTGGTGTTCCTCGACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656232.1
CDS-3UTR TCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAAGGAAGGGGTCAGAATaGACAGAAGAGTGCACTTAT +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRRKGSE*TEECTY
Trigger: ATAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTATGGCACTTCAAACACTaGCTATGTCCCATGCTAAAT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLWHFKH*LCPMLN
Trigger: ATTTAGCATGGGACATAGTCAGTGTTTGAAGTGCCA...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGACATGCTTGGTGAATTaGAGTGATGCCCTACAATCT +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRTCLVN*SDALQS
Trigger: AGATTGTAGGGCATCACTTCAATTCACCAAGCATGT...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTAGGGCAGGCAGCAGGTaGACTAACAGTACAGGCCAA +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSRAGSR*TNSTGQ
Trigger: TTGGCCTGTACTGTTAGTTCACCTGCTGCCTGCCCT...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGTTCCATTGGAAACAGTaGAGACTGACCTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVFHWKQ*RLTFNG
Trigger: ACCATTAAAGGTCAGTCTTCACTGTTTCCAATGGAA...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517880.1
ENST00000520867.5
CDS-3UTR GCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGTTCCCAGTATTGCTTTaGACTAGCACTCCAAACCCG +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKFPVLL*TSTPNP
Trigger: CGGGTTTGGAGTGCTAGTGCAAAGCAATACTGGGAA...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTCAGCGGAATGAAATATaGCGAGGGCGGTCACCGCCT +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFQRNEI*RGRSPP
Trigger: AGGCGGTGACCGCCCTCGGCATATTTCATTCCGCTG...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR GCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCCTGAAAATGAGCACTaGAGTTATCCTTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHPENEH*SYPLVP
Trigger: TGGAACTAAAGGATAACTGCAGTGCTCATTTTCAGG...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGTGCTACAAAAGGACATaGCAGCGTGAAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKCYKRT*QREEVE
Trigger: CTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCCTCTAAGAAAATGTTaGAGGAAGTTTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHPLRKC*RKFGSS
Trigger: AGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGG...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAATGCTGCTCAGTCTTaGTTATGCATTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMNAAQS*LCICLL
Trigger: GAGCAAACAAATGCATAAGCAAGACTGAGCAGCATT...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR GCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCTGCAAGTTTTATTTTaGATTCTGCAGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHLQVLF*ILQRSV
Trigger: CACAGACCTCTGCAGAATGCAAAATAAAACTTGCAG...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGCAACTGATAACTGAATaGTTAGATCCTGGGCTTACT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMQLITE*LDPGLT
Trigger: AGTAAGCCCAGGATCTAAGCATTCAGTTATCAGTTG...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTGGATGGAATCTGACTaGAAAAGCAGATTTATTCCC +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHWMESD*KSRFIP
Trigger: GGGAATAAATCTGCTTTTCCAGTCAGATTCCATCCA...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGCAGCACTGCTGCCATTaGCAGCTGTGTTATTATTTA +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRQHCCH*QLCYYL
Trigger: TAAATAATAACACAGCTGCCAATGGCAGCAGTGCTG...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAATGTTATGGGTAGCTaGAGCAGGAAAAAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRNVMGS*SRKKPS
Trigger: GCTTGGCTTTTTCCTGCTCCAGCTACCCATAACATT...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGAAGTACCTAGCCCAGTaGCTTCTTGATAATCAAACC +
Preference number: 4 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRKYLAQ*LLDNQT
Trigger: GGTTTGATTATCAAGAAGCCACTGGGCTAGGTACTT...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAAAGTACCTAGCCCAGTaGCTTCTTGATAATCAAACC +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLKYLAQ*LLDNQT
Trigger: GGTTTGATTATCAAGAAGCCACTGGGCTAGGTACTT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGATCATCCAAGACATATaGCTTAACTTCCACCCGTTT +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMIIQDI*LNFHPF
Trigger: AAACGGGTGGAAGTTAAGCCATATGTCTTGGATGAT...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGATCATCCAAGACATATaGCTTAACTTCCACCCGTTT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVIIQDI*LNFHPF
Trigger: AAACGGGTGGAAGTTAAGCCATATGTCTTGGATGAT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp CCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCACTGCCAGCACGAGAATaGATAGCAGCCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: PLGFQQNKRIKLPCNPMALPARE*IAAQQY
Trigger: ATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAG...TGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCCTGCCAGCACGAGAATaGATAGCAGCCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGLPARE*IAAQQY
Trigger: ATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAG...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACTTCCATGCAACCCGATaGCAATACGAAAAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNFHATR*QYEKGV
Trigger: AACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAA...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTATTCCATGCAACCCGATaGCAATACGAAAAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLFHATR*QYEKGV
Trigger: AACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAA...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAATGTTGCAGGAAGTTTaGATCCTCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRMLQEV*ILLVSS
Trigger: GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACAT...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAAGAATTTTCCTCGTTaGGTAGGTTTAGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMKNFPR*VGLGNQ
Trigger: CTGATTGCCTAAACCTACCCAACGAGGAAAATTCTT...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCATCTGGGGTGGGAAGTaGATTCCTGGTTTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIIWGGK*IPGFGR
Trigger: TCTCCCGAAACCAGGAATTCACTTCCCACCCCAGAT...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAGATGTGGATGGAATCTaGCTGGAAAAGCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLDVDGI*LEKQIY
Trigger: ATAAATCTGCTTTTCCAGTCAGATTCCATCCACATC...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTGGGGTGGCATTTTGGTaGTGGTGTGGAGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRGVAFW*WCGGCR
Trigger: TCTGCAGCCTCCACACCATCACCAAAATGCCACCCC...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGCCCAAGATCTCATCCTaGATGTTATGGGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGPKISS*MLWVAG
Trigger: TCCAGCTACCCATAACATTCAGGATGAGATCTTGGG...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTGGGACCCCTCCCTGGTaGAAGAAACTTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: PDGNTKKEFILFAVTQESGTPPW*KKLASS
Trigger: TGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCC...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTGAGAGAGGCCCGATCTaGGGAGAGAAGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFERGPI*GEKLPP
Trigger: TGGAGGCAGCTTCTCTCCTCAGATCGGGCCTCTCTC...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp GGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTAATATTATGTGGGTGGTGCTGTaGGAGAGGCCCGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: GKIVSCHFIVIKCSRSNIMWVVL*ERPDLR
Trigger: CCTCAGATCGGGCCTCTCTCACAGCACCACCCACAT...AATATTAGAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAAGATTATTCGCCAAATaGGGCAGCTGGTTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRRLFAK*GSWLKA
Trigger: TGCTTTTAACCAGCTGCCTCATTTGGCGAATAATCT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTTTCAGCCCTCTGCGGTaGTCTCGGCCTTGGGAACCT +
Preference number: 4 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFFSPLR*SRPWEP
Trigger: AGGTTCCCAAGGCCGAGATCACCGCAGAGGGCTGAA...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCCCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFPHSGD*SSEVNP
Trigger: TGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGG...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTTTAGTTCCAGCGGAATaGAATATGCCGAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: PDGNTKKEFILFAVTQESLVPAE*NMPRAV
Trigger: GACCGCCCTCGGCATATTTCATTCCGCTGGAACTAA...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGAGGAAGGGGTCAGAATaGACAGAAGAGTGCACTTAT +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKRKGSE*TEECTY
Trigger: ATAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCT...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTCACCCTCCATTCGCATaGCTGCTTTCAGTATTTGCA +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFHPPFA*LLSVFA
Trigger: TGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTG...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACGGAAACAGTGAAGACTaGCCTTTAATGGTATCATTT +
Preference number: 4 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHGNSED*PLMVSF
Trigger: AAATGATACCATTAAAGGTCAGTCTTCACTGTTTCC...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517880.1
ENST00000520867.5
CDS-3UTR GCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCGGGTGCAGATCTTGCTaGGGTCGCTGTTCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLGCRSC*GRCSWA
Trigger: AGCCCAGGAACAGCGACCGCAGCAAGATCTGCACCC...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTCCGGGTGCAGATCTTaGTGCGGTCGCTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLSGCRS*CGRCSW
Trigger: CCAGGAACAGCGACCGCAGCAAGATCTGCACCCGGA...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGATTTATTCCCAGTATTaGTTTGCACTAGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVIYSQY*FALALQ
Trigger: TTGGAGTGCTAGTGCAAAGCAATACTGGGAATAAAT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGTTTTCTCCTTCCCATTaGCATTTTCCGAAGAATTGT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVFSPSH*HFPKNC
Trigger: ACAATTCTTCGGAAAATGGCAATGGGAAGGAGAAAA...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR GCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCACACCATTCAGCCCTCTaGGGTGATCTCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPHHSAL*GDLGLG
Trigger: CCCAAGGCCGAGATCACCGCAGAGGGCTGAATGGTG...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTACCTCTAAGAAAATGTTaGAGGAAGTTTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLPLRKC*RKFGSS
Trigger: AGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGG...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTGTGGTTCCACAGCAGTaGTGGGGCAAGTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: PDGNTKKEFILFAVTQESVVPQQ*WGKSLV
Trigger: AACCAAAGACTTGCCCCAGCACTGCTGTGGAACCAC...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp CTTTCGAGAATATCGTTCCACTCTTTCCCCATTCTGGTGACTGAAGCAGTGAGGTCGCCCATATGTCCTTaGTGCATGTCAAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: LSRISFHSFPILVTEAVRSPICP*CMSNEK
Trigger: TTTCTCATTTGACATGCAGCAAGGACATATGGGCGA...CCTCACTGCTTCAGTCACCAGAATGGGGAAAGAGTGGAACGATATTCTCGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659882.1
CDS-3UTR CCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTGGCTGCAGATGTGGATaGAATCTGACTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFGCRCG*NLTGKA
Trigger: TGCTTTTCCAGTCAGATTCCATCCACATCTGCAGCC...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCGGCTGCAGATGTGGATaGAATCTGACTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGGCRCG*NLTGKA
Trigger: TGCTTTTCCAGTCAGATTCCATCCACATCTGCAGCC...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGACAGCACTGCTGCCATTaGCAGCTGTGTTATTATTTA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRQHCCH*QLCYYL
Trigger: TAAATAATAACACAGCTGCCAATGGCAGCAGTGCTG...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGAAACCCTGTCAACACTaGAGATTCGATCCTTATTTT +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVKPCQH*RFDPYF
Trigger: AAAATAAGGATCGAATCTCCAGTGTTGACAGGGTTT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGCTAGATGTCAAGGGTTaGGTTGAAGTACCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGLDVKG*VEVPSP
Trigger: TGGGCTAGGTACTTCAACCCAACCCTTGACATCTAG...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp GGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTAATATTGTGGGGGATGGGGACTaGCAGGAGACCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: GKIVSCHFIVIKCSRSNIVGDGD*QETSFA
Trigger: AGCAAAGGAGGTCTCCTGCCAGTCCCCATCCCCCAC...AATATTAGAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAATCTTCATCAATGTCTaGAGGCAATCCGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRIFINV*RQSAYK
Trigger: TTTGTAGGCGGATTGCCTCCAGACATTGATGAAGAT...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAATCTTCATCAATGTCTaGAGGCAATCCGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRIFINV*RQSAYK
Trigger: TTTGTAGGCGGATTGCCTCCAGACATTGATGAAGAT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAATCATCCAAGACATATaGCTTAACTTCCACCCGTTT +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLIIQDI*LNFHPF
Trigger: AAACGGGTGGAAGTTAAGCCATATGTCTTGGATGAT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGTTTGTCTTCCAGTTTTaGCTACAAGTGTACTGTAAC +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVFVFQF*LQVYCN
Trigger: GTTACAGTACACTTGTAGCCAAAACTGGAAGACAAA...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACCATAAGAATGCACACTaGCCACAGTACTTATATGAC +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNHKNAH*PQYLYD
Trigger: GTCATATAAGTACTGTGGCCAGTGTGCATTCTTATG...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAGATGTGGATGGAATCTaGCTGGAAAAGCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRDVDGI*LEKQIY
Trigger: ATAAATCTGCTTTTCCAGTCAGATTCCATCCACATC...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTAGGAAAAAGCCAAGCTaGCCCAGCACTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFRKKPS*PSTAAI
Trigger: AATGGCAGCAGTGCTGGGTCAGCTTGGCTTTTTCCT...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAAGTATTCCAGCTTCCTaGCCTGGACTTGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSSIPAS*PGLGES
Trigger: GCTTTCCCCAAGTCCAGGTCAGGAAGCTGGAATACT...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGAGGCGCTATCGCTGCTaGCCAGTTACTGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWRRYRC*PVTETS
Trigger: ACTGGTTTCAGTAACTGGTCAGCAGCGATAGCGCCT...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCGGGACCCCTCCCTGGTaGAAGAAACTTGCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFGTPPW*KKLASS
Trigger: TGAAGATGCAAGTTTCTTTCACCAGGGAGGGGTCCC...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp AATGGTCGAGGAACACCACCAACAAATATAGTTTTTCGTGGGTCAAGTGGCTGTTTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: NGRGTPPTNIVFRGSSGCLLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...ACAGCCACTTGACCCACGAAAAACTATATTTGTTGGTGGTGTTCCTCGACCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656232.1
CDS-3UTR TCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGCAATGCATGCATCAATaGGAGCCTGCACAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTQCMHQ*EPAQSF
Trigger: AAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTTCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFSPCCS*TKRALI
Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR TCA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCTCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA +
Preference number: 4 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFSPCCS*TKRALI
Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAACTACATGCTTGGTaGATTGAAGTGATGCCCTAC +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGELHAW*IEVMPY
Trigger: GTAGGGCATCACTTCAATTCACCAAGCATGTAGTTC...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCGGAAACAGTGAAGACTaGCCTCAACACAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIGNSED*PQHRSP
Trigger: TGGGCTTCTGTGTTGAGGTCAGTCTTCACTGTTTCC...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657000.1
CDS-3UTR GCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTAAGCTGACCCAGCACTaGTGCCATTGGCAGCTGTGT +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRKLTQH*CHWQLC
Trigger: ACACAGCTGCCAATGGCAGCAGTGCTGGGTCAGCTT...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAGAACTCTCCAGTGAGTaGATGTCGAATGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSELSSE*MSNVLG
Trigger: CCCCAGGACATTCGACATGCACTCACTGGAGAGTTC...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000522336.5
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGATTGAAACAGCAGGAATaGATAGCCTTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRLKQQE*IAFRRK
Trigger: TTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAA...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGACCTGAAAATGAGCACTaGAGTTATCCTTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRPENEH*SYPLVP
Trigger: TGGAACTAAAGGATAACTGCAGTGCTCATTTTCAGG...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGACCTGAAAATGAGCACTaGAGTTATCCTTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRPENEH*SYPLVP
Trigger: TGGAACTAAAGGATAACTGCAGTGCTCATTTTCAGG...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGTGCTACAAAAGGACATaGCAGCGTGAAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTCYKRT*QREEVE
Trigger: CTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAAGAATAAAACTTCCATaGAACCCGATGGCAATACGA +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRRIKLP*NPMAIR
Trigger: TCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGACCTCTAAGAAAATGTTaGAGGAAGTTTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRPLRKC*RKFGSS
Trigger: AGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGG...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAGCTTATGCATTTGTTTaGTCTAACATGCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLAYAFV*SNMLFP
Trigger: TGGAAAGAGCATGTTAGAGCAAACAAATGCATAAGC...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR GCA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAATATTAGACAGCAAATaGCTCCATTTTGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLILDSK*LHFDLW
Trigger: CCAAAGGTCAAAATGGAGGCATTTGCTGTCTAATAT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGGAAAAATTGAGGTATTaGATAAAGAGATATCCCGTC +
Preference number: 4 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVEKLRY*IKRYPV
Trigger: GACGGGATATCTCTTTATGCAATACCTCAATTTTTC...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCTACACCAATAGCTGGTaGTGGGGAAGGATGTTTAAG +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGYTNSW*WGRMFK
Trigger: CTTAAACATCCTTCCCCAGCACCAGCTATTGGTGTA...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACTTTTATTTTGCATTCTaGAGAGGTCTGTGTATGGAG +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNFYFAF*RGLCME
Trigger: CTCCATACACAGACCTCTGCAGAATGCAAAATAAAA...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGTGGGAAGTGAATTCCTaGTTTCGGGAGAGGAAATCA +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGWEVNS*FRERKS
Trigger: TGATTTCCTCTCCCGAAACCAGGAATTCACTTCCCA...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAAACCCTGTCAACACTaGAGATTCGATCCTTATTTT +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNKPCQH*RFDPYF
Trigger: AAAATAAGGATCGAATCTCCAGTGTTGACAGGGTTT...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTGTGCAAAGGCAGAGCTaGGGCGAGCATACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRVQRQS*GEHTSG
Trigger: TCCAGAAGTATGCTCGCCCCAGCTCTGCCTTTGCAC...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCCTGCCAGCACGAGAATaGATAGCAGCCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRILPARE*IAAQQY
Trigger: ATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAG...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACTTTTTAACGTCAAAATaGAGAGCAAAGGCTGACATC +
Preference number: 4 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNFLTSK*RAKADI
Trigger: GATGTCAGCCTTTGCTCTCCATTTTGACGTTAAAAA...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAGGTACACCAATAGCTaGTGCTGGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTRYTNS*CWGRMF
Trigger: AAACATCCTTCCCCAGCACCAGCTATTGGTGTACCT...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCCCAGTGTCCCATCCCTaGGGTTTCCTCAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLPVSHP*GFLKAL
Trigger: AAGGGCCTTGAGGAAACCCCAGGGATGGGACACTGG...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAAATCTCTTAAAACATTaGCTTGGATCCAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRNLLKH*LGSNWA
Trigger: AGCCCAATTGGATCCAAGTCAATGTTTTAAGAGATT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR TCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTAGTATTCCAGCTTCCTaGCCTGGACTTGGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRSIPAS*PGLGES
Trigger: GCTTTCCCCAAGTCCAGGTCAGGAAGCTGGAATACT...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTAGGCGCTATCGCTGCTaGCCAGTTACTGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRRRYRC*PVTETS
Trigger: ACTGGTTTCAGTAACTGGTCAGCAGCGATAGCGCCT...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGAGATTATTCGCCAAATaGGGCAGCTGGTTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGRLFAK*GSWLKA
Trigger: TGCTTTTAACCAGCTGCCTCATTTGGCGAATAATCT...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp CCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCACTCTCATTATGTCAATaGGTGAACTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PLGFQQNKRIKLPCNPMALSLCQ*VNSPVS
Trigger: ACTCACTGGAGAGTTCACTCATTGACATAATGAGAG...TGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000522336.5
CDS-3UTR TCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTACCCCATTCTGGTGACTaGAGCAGTGAGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLPHSGD*SSEVNP
Trigger: TGGGTTCACCTCACTGCTTCAGTCACCAGAATGGGG...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCCAATGCATGCATCAATaGGAGCCTGCACAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIQCMHQ*EPAQSF
Trigger: AAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAGGAAGGGGTCAGAATaGACAGAAGAGTGCACTTAT +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTRKGSE*TEECTY
Trigger: ATAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCT...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGTGGCACTTCAAACACTaGCTATGTCCCATGCTAAAT +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGWHFKH*LCPMLN
Trigger: ATTTAGCATGGGACATAGTCAGTGTTTGAAGTGCCA...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGCAAATGCCTCCATTTTaGCCTTTGGAACTTAACAGG +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGQMPPF*PLELNR
Trigger: CCTGTTAAGTTCCAAAGGTCAAAATGGAGGCATTTG...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCACATGCTTGGTGAATTaGAGTGATGCCCTACAATCT +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGTCLVN*SDALQS
Trigger: AGATTGTAGGGCATCACTTCAATTCACCAAGCATGT...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGGAACTACATGCTTGGTaGATTGAAGTGATGCCCTAC +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTELHAW*IEVMPY
Trigger: GTAGGGCATCACTTCAATTCACCAAGCATGTAGTTC...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTTTGCAGGGAGGTTTCTaGTGTTCCTGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PDGNTKKEFILFAVTQESLQGGF*CSWSCF
Trigger: AAAACAGGACCAGGAACAGCAGAAACCTCCCTGCAA...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATCTGACCCAGCACTGCTaGCATTGGCAGCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYLTQHC*HWQLCY
Trigger: ATAACACAGCTGCCAATGGCAGCAGTGCTGGGTCAG...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTACATCCAGGATTTAGGTaGAAAGGCAGAGCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLHPGFR*KGRAGA
Trigger: CGCCCCAGCTCTGCCTTTGCACCTAAATCCTGGATG...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCACATCCAGGATTTAGGTaGAAAGGCAGAGCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPHPGFR*KGRAGA
Trigger: CGCCCCAGCTCTGCCTTTGCACCTAAATCCTGGATG...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGTTGAAACAGCAGGAATaGATAGCCTTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKLKQQE*IAFRRK
Trigger: TTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAA...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGAGAATAAAACTTCCATaGAACCCGATGGCAATACGA +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKRIKLP*NPMAIR
Trigger: TCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCT...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAGCTTATGCATTTGTTTaGTCTAACATGCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRAYAFV*SNMLFP
Trigger: TGGAAAGAGCATGTTAGAGCAAACAAATGCATAAGC...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR GCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGCTCCATTCGCATGACTaGTTTCAGTATTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTLHSHD*FQYLQG
Trigger: TCCCTGCAAATACTGAAAGCAGTCATGCGAATGGAG...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAAAACCCTGTCAACACTaGAGATTCGATCCTTATTTT +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRKPCQH*RFDPYF
Trigger: AAAATAAGGATCGAATCTCCAGTGTTGACAGGGTTT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTGTGCAAAGGCAGAGCTaGGGCGAGCATACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFVQRQS*GEHTSG
Trigger: TCCAGAAGTATGCTCGCCCCAGCTCTGCCTTTGCAC...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTGCATGTCGAATGTCCTaGGGCGATCCGGAAAAGGAA +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRACRMS*GDPEKE
Trigger: TTCCTTTTCCGGATCGCCCCAGGACATTCGACATGC...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCATCTTCATCAATGTCTaGAGGCAATCCGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSIFINV*RQSAYK
Trigger: TTTGTAGGCGGATTGCCTCCAGACATTGATGAAGAT...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCCTGCCAGCACGAGAATaGATAGCAGCCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFLPARE*IAAQQY
Trigger: ATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAG...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGAAGTTTGGATCCTCTTaGTTTCCAGCAAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: VKLQTATKGHASVKRLRKKFGSS*FPAKQE
Trigger: CTCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTT...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAGTTCCACAGCAGTGCTaGGGCAAGTCTTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSVPQQC*GKSLVL
Trigger: CAAAACCAAAGACTTGCCCCAGCACTGCTGTGGAAC...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTGTTCCACAGCAGTGCTaGGGCAAGTCTTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFVPQQC*GKSLVL
Trigger: CAAAACCAAAGACTTGCCCCAGCACTGCTGTGGAAC...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCAGGTACACCAATAGCTaGTGCTGGGGAAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIRYTNS*CWGRMF
Trigger: AAACATCCTTCCCCAGCACCAGCTATTGGTGTACCT...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTAGAAGAGCTGCCTGTTaGGAAAGACAACTTAGACGC +
Preference number: 4 (lower is better)
Translates to: PDGNTKKEFILFAVTQESRRAAC*ERQLRR
Trigger: GCGTCTAAGTTGTCTTTCCCAACAGGCAGCTCTTCT...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp GGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTAATATTAGGAAAAAGCCAAGCTaGCCCAGCACTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: GKIVSCHFIVIKCSRSNIRKKPS*PSTAAI
Trigger: AATGGCAGCAGTGCTGGGTCAGCTTGGCTTTTTCCT...AATATTAGAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATCTCCAAAGCCAGGGCTaGCATGATGGGGGAAATTTT +
Preference number: 4 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYLQSQG*HDGGNF
Trigger: AAAATTTCCCCCATCATGTCAGCCCTGGCTTTGGAG...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACTGAAGCAGTGAGGTaGACCCAGGCCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: WQYEKGVHIVCSDTRIYKTEAVR*TQATMK
Trigger: CTTCATAGTGGCCTGGGTTCACCTCACTGCTTCAGT...TTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRILLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTGGGTCAAGTGGCTGTaGACCATCCATCACAAAGTC +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRWVKWL*TIHHKV
Trigger: GACTTTGTGATGGATGGTTCACAGCCACTTGACCCA...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATCTCCATGCTGCAGCTaGACAAAGCGGGCACTGATA +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPSPCCS*TKRALI
Trigger: TATCAGTGCCCGCTTTGTTCAGCTGCAGCATGGAGA...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTATTAGTTCCAGCGGAATaGAATATGCCGAGGGCGGTC +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLLVPAE*NMPRAV
Trigger: GACCGCCCTCGGCATATTTCATTCCGCTGGAACTAA...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTAGGAAGGGGTCAGAATaGACAGAAGAGTGCACTTAT +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSRKGSE*TEECTY
Trigger: ATAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCT...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTAGACACACCATTCTGTaGTTTAAAACACCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFRHTIL*FKTPKA
Trigger: TGCTTTGGGTGTTTTAAATCACAGAATGGTGTGTCT...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTCTGACCCAGCACTGCTaGCATTGGCAGCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFLTQHC*HWQLCY
Trigger: ATAACACAGCTGCCAATGGCAGCAGTGCTGGGTCAG...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCACCAGTAAGAGACGATaGGCTAGATGTCAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFTSKRR*ARCQGL
Trigger: CAACCCTTGACATCTAGCGCATCGTCTCTTACTGGT...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp GGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTAATATTGAACTCTCCAGTGAGTaGATGTCGAATGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKIVSCHFIVIKCSRSNIELSSE*MSNVLG
Trigger: CCCCAGGACATTCGACATGCACTCACTGGAGAGTTC...AATATTAGAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp CCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCACCTGAAAATGAGCACTaGAGTTATCCTTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PLGFQQNKRIKLPCNPMAPENEH*SYPLVP
Trigger: TGGAACTAAAGGATAACTGCAGTGCTCATTTTCAGG...TGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGAAAAATTGAGGTATTaGATAAAGAGATATCCCGTC +
Preference number: 4 (lower is better)
Translates to: KRTCQREEVEEGVRMNRREKLRY*IKRYPV
Trigger: GACGGGATATCTCTTTATGCAATACCTCAATTTTTC...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGCTGCAAGTTTTATTTTaGATTCTGCAGAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGLQVLF*ILQRSV
Trigger: CACAGACCTCTGCAGAATGCAAAATAAAACTTGCAG...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCATCATCCAAGACATATaGCTTAACTTCCACCCGTTT +
Preference number: 4 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGIIQDI*LNFHPF
Trigger: AAACGGGTGGAAGTTAAGCCATATGTCTTGGATGAT...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTATGTTGCAGGAAGTTTaGATCCTCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSMLQEV*ILLVSS
Trigger: GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACAT...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACCAATAGCTGGTGCTaGGGAAGGATGTTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: PDGNTKKEFILFAVTQESTNSWC*GRMFKQ
Trigger: TTGCTTAAACATCCTTCCCCAGCACCAGCTATTGGT...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCACTCCAAAGCCAGGGCTaGCATGATGGGGGAAATTTT +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPLQSQG*HDGGNF
Trigger: AAAATTTCCCCCATCATGTCAGCCCTGGCTTTGGAG...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFLLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGAGATATCCCGTCAGTaGAAAGTGTGCCTAAAAATG +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSEISRQ*KVCLKM
Trigger: CATTTTTAGGCACACTTTTCACTGACGGGATATCTC...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTCGCCCATATGTCCTTaGATTAATAAGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRISPICP*INKQRA
Trigger: AGCTCTCTGCTTATTAATGCAAGGACATATGGGCGA...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTGGCTGCAGATGTGGATaGAATCTGACTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRGCRCG*NLTGKA
Trigger: TGCTTTTCCAGTCAGATTCCATCCACATCTGCAGCC...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTCTAGATGTCAAGGGTTaGGTTGAAGTACCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRLDVKG*VEVPSP
Trigger: TGGGCTAGGTACTTCAACCCAACCCTTGACATCTAG...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCATCTTCATCAATGTCTaGAGGCAATCCGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIIFINV*RQSAYK
Trigger: TTTGTAGGCGGATTGCCTCCAGACATTGATGAAGAT...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTAGGCCGAATCTGGACTaGCTTATCCTTGATAGTGGG +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFRPNLD*LILDSG
Trigger: CCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCT...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR CCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTCTGCCAGCACGAGAATaGATAGCAGCCCAGCAATAT +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFLPARE*IAAQQY
Trigger: ATATTGCTGGGCTGCTATCCATTCTCGTGCTGGCAG...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR CCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTTCCATGCAACCCGATaGCAATACGAAAAAGGAGTT +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIFHATR*QYEKGV
Trigger: AACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAA...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAGTTTGGATCCTCTTaGTTTCCAGCAAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTKFGSS*FPAKQE
Trigger: CTCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTT...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAATGTTGCAGGAAGTTTaGATCCTCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSMLQEV*ILLVSS
Trigger: GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACAT...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTCCCAAGATCTCATCCTaGATGTTATGGGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFPKISS*MLWVAG
Trigger: TCCAGCTACCCATAACATTCAGGATGAGATCTTGGG...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCAGATTATTCGCCAAATaGGGCAGCTGGTTAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFRLFAK*GSWLKA
Trigger: TGCTTTTAACCAGCTGCCTCATTTGGCGAATAATCT...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCACAATGCATGCATCAATaGGAGCCTGCACAGAGCTTT +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPQCMHQ*EPAQSF
Trigger: AAAGCTCTGTGCAGGCTCTCATTGATGCATGCATTG...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTATGGAGAGCAAAGGCTaGCATCTGATGAGTATTAGT +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFMESKG*HLMSIS
Trigger: ACTAATACTCATCAGATGTCAGCCTTTGCTCTCCAT...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAGCAAGTCTTTGGTTTTaGAGGATCCAAGATGGTACT +
Preference number: 4 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSASLWF*RIQDGT
Trigger: AGTACCATCTTGGATCCTTCAAAACCAAAGACTTGC...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCCTTGGTGAATTGAAGTaGTGCCCTACAATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRILGELK*CPTICK
Trigger: TTTACAGATTGTAGGGCATCACTTCAATTCACCAAG...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTCCCAGTATTGCTTTaGACTAGCACTCCAAACCCG +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPFPVLL*TSTPNP
Trigger: CGGGTTTGGAGTGCTAGTGCAAAGCAATACTGGGAA...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGTTTTCTCCTTCCCATTaGCATTTTCCGAAGAATTGT +
Preference number: 4 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTFSPSH*HFPKNC
Trigger: ACAATTCTTCGGAAAATGGCAATGGGAAGGAGAAAA...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp TGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACCAGTAAGAGACGATaGGCTAGATGTCAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: WQYEKGVHIVCSDTRIYKTSKRR*ARCQGL
Trigger: CAACCCTTGACATCTAGCGCATCGTCTCTTACTGGT...TTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTCCTGAAAATGAGCACTaGAGTTATCCTTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PDGNTKKEFILFAVTQESPENEH*SYPLVP
Trigger: TGGAACTAAAGGATAACTGCAGTGCTCATTTTCAGG...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTTGCTACAAAAGGACATaGCAGCGTGAAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFCYKRT*QREEVE
Trigger: CTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR GCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTGCTACAAAAGGACATaGCAGCGTGAAGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLCYKRT*QREEVE
Trigger: CTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR GCA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTAGAATAAAACTTCCATaGAACCCGATGGCAATACGA +
Preference number: 4 (lower is better)
Translates to: PDGNTKKEFILFAVTQESRIKLP*NPMAIR
Trigger: TCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCT...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCCCTCTAAGAAAATGTTaGAGGAAGTTTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIPLRKC*RKFGSS
Trigger: AGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGG...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCAAACATACGTACCTTTaGACAGATTTACACAGTTAC +
Preference number: 4 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSKHTYL*TDLHSY
Trigger: GTAACTGTGTAAATCTGTGCAAAGGTACGTATGTTT...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTAAACATACGTACCTTTaGACAGATTTACACAGTTAC +
Preference number: 4 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFKHTYL*TDLHSY
Trigger: GTAACTGTGTAAATCTGTGCAAAGGTACGTATGTTT...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATCTTCAAAGGCGAGATaGAGTTCAGGGGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPSSKAR*SSGALF
Trigger: GAATAACGCCCCTGAACTCCATCTCGCCTTTGAAGA...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTATCTTCATCAATGTCTaGAGGCAATCCGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFIFINV*RQSAYK
Trigger: TTTGTAGGCGGATTGCCTCCAGACATTGATGAAGAT...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR CCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATACCAATAGCTGGTGCTaGGGAAGGATGTTTAAGCAA +
Preference number: 4 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYTNSWC*GRMFKQ
Trigger: TTGCTTAAACATCCTTCCCCAGCACCAGCTATTGGT...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTGATGTGGATGGAATCTaGCTGGAAAAGCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFDVDGI*LEKQIY
Trigger: ATAAATCTGCTTTTCCAGTCAGATTCCATCCACATC...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTCTCTCATTATGTCAATaGGTGAACTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRLSLCQ*VNSPVS
Trigger: ACTCACTGGAGAGTTCACTCATTGACATAATGAGAG...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp TGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAATTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: WQYEKGVHIVCSDTRIYKLLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...TTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTATTGCTCTCAGCTTTATaGGGCCAATCCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLLLSAL*GQSTIR
Trigger: TCTGATTGTGGATTGGCCTCATAAAGCTGAGAGCAA...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATGCAAGTCTTTGGTTTTaGAGGATCCAAGATGGTACT +
Preference number: 4 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYASLWF*RIQDGT
Trigger: AGTACCATCTTGGATCCTTCAAAACCAAAGACTTGC...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCCTTGGTGAATTGAAGTaGTGCCCTACAATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFLGELK*CPTICK
Trigger: TTTACAGATTGTAGGGCATCACTTCAATTCACCAAG...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCCTCAAGGCCCTTCATTaGATGCTCAACGTAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSLKALH*MLNVRF
Trigger: AAACCTTACGTTGAGCATTCAATGAAGGGCCTTGAG...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTGGTTTAGGCAATCAGTaGATGAAGAAATATAGCCCA +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFGLGNQ*MKKYSP
Trigger: TGGGCTATATTTCTTCATTCACTGATTGCCTAAACC...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTCCATTGGAAACAGTaGAGACTGACCTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWFHWKQ*RLTFNG
Trigger: ACCATTAAAGGTCAGTCTTCACTGTTTCCAATGGAA...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517880.1
CDS-3UTR TCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTTCCATTGGAAACAGTaGAGACTGACCTCAACACAG +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSFHWKQ*RLTSTQ
Trigger: CTGTGTTGAGGTCAGTCTTCACTGTTTCCAATGGAA...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000657000.1
CDS-3UTR GCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTATTTATTCCCAGTATTaGTTTGCACTAGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSIYSQY*FALALQ
Trigger: TTGGAGTGCTAGTGCAAAGCAATACTGGGAATAAAT...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTGAAACAGCAGGAATaGATAGCCTTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWLKQQE*IAFRRK
Trigger: TTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAA...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCTTGAAACAGCAGGAATaGATAGCCTTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFLKQQE*IAFRRK
Trigger: TTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAA...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTTGAAACAGCAGGAATaGATAGCCTTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFLKQQE*IAFRRK
Trigger: TTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAA...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATTGAAACAGCAGGAATaGATAGCCTTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSLKQQE*IAFRRK
Trigger: TTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAA...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGCCTGAAAATGAGCACTaGAGTTATCCTTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWPENEH*SYPLVP
Trigger: TGGAACTAAAGGATAACTGCAGTGCTCATTTTCAGG...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGAGAATAAAACTTCCATaGAACCCGATGGCAATACGA +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWRIKLP*NPMAIR
Trigger: TCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCT...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGCCTCTAAGAAAATGTTaGAGGAAGTTTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWPLRKC*RKFGSS
Trigger: AGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGG...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTATATTAGACAGCAAATaGCTCCATTTTGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSILDSK*LHFDLW
Trigger: CCAAAGGTCAAAATGGAGGCATTTGCTGTCTAATAT...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTTCGCCCATATGTCCTTaGTTTAATGGTATCATTTTC +
Preference number: 4 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSSPICP*FNGIIF
Trigger: GAAAATGATACCATTAAAGCAAGGACATATGGGCGA...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334035.9
CDS-3UTR CCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTGGATGGAATCTGACTaGAAAAGCAGATTTATTCCC +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWWMESD*KSRFIP
Trigger: GGGAATAAATCTGCTTTTCCAGTCAGATTCCATCCA...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTGGATGGAATCTGACTaGAAAAGCAGATTTATTCCC +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFWMESD*KSRFIP
Trigger: GGGAATAAATCTGCTTTTCCAGTCAGATTCCATCCA...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCAATGTTATGGGTAGCTaGAGCAGGAAAAAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLNVMGS*SRKKPS
Trigger: GCTTGGCTTTTTCCTGCTCCAGCTACCCATAACATT...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp GGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTAATATTAATGTTATGGGTAGCTaGAGCAGGAAAAAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GKIVSCHFIVIKCSRSNINVMGS*SRKKPS
Trigger: GCTTGGCTTTTTCCTGCTCCAGCTACCCATAACATT...AATATTAGAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAATCATCCAAGACATATaGCTTAACTTCCACCCGTTT +
Preference number: 4 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSIIQDI*LNFHPF
Trigger: AAACGGGTGGAAGTTAAGCCATATGTCTTGGATGAT...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGAAGTTTGGATCCTCTTaGTTTCCAGCAAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWKFGSS*FPAKQE
Trigger: CTCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTT...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCATGTTGCAGGAAGTTTaGATCCTCTTGGTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSMLQEV*ILLVSS
Trigger: GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACAT...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTTTTTAACGTCAAAATaGAGAGCAAAGGCTGACATC +
Preference number: 4 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIFLTSK*RAKADI
Trigger: GATGTCAGCCTTTGCTCTCCATTTTGACGTTAAAAA...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCGCTCAACGTAAGGTTTaGGAATTGCCAGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLAQRKV*ELPDER
Trigger: TCTCTCATCTGGCAATTCCCAAACCTTACGTTGAGC...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265085.10
3UTR CAA 72 bp ATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATaGTTTGCAGTGACACAAGAATCTACAAAACACCTA +
Preference number: 4 (lower is better)
Translates to: MQPDGNTKKEFI*FAVTQESTKHL
Trigger: TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR TCA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTAATCTCTTAAAACATTaGCTTGGATCCAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFNLLKH*LGSNWA
Trigger: AGCCCAATTGGATCCAAGTCAATGTTTTAAGAGATT...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTCTCTCATTATGTCAATaGGTGAACTCTCCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFLSLCQ*VNSPVS
Trigger: ACTCACTGGAGAGTTCACTCATTGACATAATGAGAG...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTAATGGAGAGCAAAGGCTaGCATCTGATGAGTATTAGT +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLMESKG*HLMSIS
Trigger: ACTAATACTCATCAGATGTCAGCCTTTGCTCTCCAT...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp TGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAGAGATATCCCGTCAGTaGAAAGTGTGCCTAAAAATG +
Preference number: 4 (lower is better)
Translates to: WQYEKGVHIVCSDTRIYKEISRQ*KVCLKM
Trigger: CATTTTTAGGCACACTTTTCACTGACGGGATATCTC...TTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGGGAAACAGTGAAGACTaGCCTTTAATGGTATCATTT +
Preference number: 4 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWGNSED*PLMVSF
Trigger: AAATGATACCATTAAAGGTCAGTCTTCACTGTTTCC...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517880.1
CDS-3UTR CCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTCAGCACTGCTGCCATTaGCAGCTGTGTTATTATTTA +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFQHCCH*QLCYYL
Trigger: TAAATAATAACACAGCTGCCAATGGCAGCAGTGCTG...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCACAGCACTGCTGCCATTaGCAGCTGTGTTATTATTTA +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPQHCCH*QLCYYL
Trigger: TAAATAATAACACAGCTGCCAATGGCAGCAGTGCTG...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCAAACCCTGTCAACACTaGAGATTCGATCCTTATTTT +
Preference number: 4 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFKPCQH*RFDPYF
Trigger: AAAATAAGGATCGAATCTCCAGTGTTGACAGGGTTT...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCAAAGTACCTAGCCCAGTaGCTTCTTGATAATCAAACC +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPKYLAQ*LLDNQT
Trigger: GGTTTGATTATCAAGAAGCCACTGGGCTAGGTACTT...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp TGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAATCTTCATCAATGTCTaGAGGCAATCCGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: WQYEKGVHIVCSDTRIYKIFINV*RQSAYK
Trigger: TTTGTAGGCGGATTGCCTCCAGACATTGATGAAGAT...TTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp GGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCTAATATTATCTTCATCAATGTCTaGAGGCAATCCGCCTACAAA +
Preference number: 4 (lower is better)
Translates to: GKIVSCHFIVIKCSRSNIIFINV*RQSAYK
Trigger: TTTGTAGGCGGATTGCCTCCAGACATTGATGAAGAT...AATATTAGAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CCA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCTTTGTCTTCCAGTTTTaGCTACAAGTGTACTGTAAC +
Preference number: 4 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFFVFQF*LQVYCN
Trigger: GTTACAGTACACTTGTAGCCAAAACTGGAAGACAAA...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTAGGTCTATGGAGGAACTaGGAATTGGAAGTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLGLWRN*ELEVKR
Trigger: TCTTTTGACTTCCAATTCCCAGTTCCTCCATAGACC...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATAATCTCTTAAAACATTaGCTTGGATCCAATTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYNLLKH*LGSNWA
Trigger: AGCCCAATTGGATCCAAGTCAATGTTTTAAGAGATT...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR TCA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTGATGTGGATGGAATCTaGCTGGAAAAGCAGATTTAT +
Preference number: 4 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFDVDGI*LEKQIY
Trigger: ATAAATCTGCTTTTCCAGTCAGATTCCATCCACATC...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTACTATCCTAGTCCTCTaGAGATCACAGTCTGAAATA +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFTILVL*RSQSEI
Trigger: TATTTCAGACTGTGATCTTCAGAGGACTAGGATAGT...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTGGAAACAGTGAAGACTaGCCTTTAATGGTATCATTT +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRGNSED*PLMVSF
Trigger: AAATGATACCATTAAAGGTCAGTCTTCACTGTTTCC...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR TCA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTCCATTGGAAACAGTaGAGACTGACCTTTAATGGT +
Preference number: 4 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPFHWKQ*RLTFNG
Trigger: ACCATTAAAGGTCAGTCTTCACTGTTTCCAATGGAA...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTATTTATTCCCAGTATTaGTTTGCACTAGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRIYSQY*FALALQ
Trigger: TTGGAGTGCTAGTGCAAAGCAATACTGGGAATAAAT...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTATTGAAACAGCAGGAATaGATAGCCTTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLLKQQE*IAFRRK
Trigger: TTTCCTCCTAAAGGCTATGCATTCCTGCTGTTTCAA...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCCCTGAAAATGAGCACTaGAGTTATCCTTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSPENEH*SYPLVP
Trigger: TGGAACTAAAGGATAACTGCAGTGCTCATTTTCAGG...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAAGAATAAAACTTCCATaGAACCCGATGGCAATACGA +
Preference number: 4 (lower is better)
Translates to: WQYEKGVHIVCSDTRIYKRIKLP*NPMAIR
Trigger: TCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCT...TTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCAGAATAAAACTTCCATaGAACCCGATGGCAATACGA +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSRIKLP*NPMAIR
Trigger: TCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCT...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTACCTCTAAGAAAATGTTaGAGGAAGTTTGGATCCTCT +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLPLRKC*RKFGSS
Trigger: AGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGG...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR GCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATGCTTATGCATTTGTTTaGTCTAACATGCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYAYAFV*SNMLFP
Trigger: TGGAAAGAGCATGTTAGAGCAAACAAATGCATAAGC...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTAATGCTGCTCAGTCTTaGTTATGCATTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFNAAQS*LCICLL
Trigger: GAGCAAACAAATGCATAAGCAAGACTGAGCAGCATT...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR GCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTAAATGCTGCTCAGTCTTaGTTATGCATTTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLNAAQS*LCICLL
Trigger: GAGCAAACAAATGCATAAGCAAGACTGAGCAGCATT...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR GCA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATTTTTATTTTGCATTCTaGAGAGGTCTGTGTATGGAG +
Preference number: 4 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYFYFAF*RGLCME
Trigger: CTCCATACACAGACCTCTGCAGAATGCAAAATAAAA...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTTGGATGGAATCTGACTaGAAAAGCAGATTTATTCCC +
Preference number: 4 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFWMESD*KSRFIP
Trigger: GGGAATAAATCTGCTTTTCCAGTCAGATTCCATCCA...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCATCATCCAAGACATATaGCTTAACTTCCACCCGTTT +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLIIQDI*LNFHPF
Trigger: AAACGGGTGGAAGTTAAGCCATATGTCTTGGATGAT...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR CCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTAATCATCCAAGACATATaGCTTAACTTCCACCCGTTT +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLIIQDI*LNFHPF
Trigger: AAACGGGTGGAAGTTAAGCCATATGTCTTGGATGAT...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTAAAGTTTGGATCCTCTTaGTTTCCAGCAAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: TKKEFILFAVTQESTKHLKFGSS*FPAKQE
Trigger: CTCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTT...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCAAGTTTGGATCCTCTTaGTTTCCAGCAAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSKFGSS*FPAKQE
Trigger: CTCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTT...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCGTTTTTCACTTTTGTTaGGCATTTGGCCTTCAACTG +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSVFHFC*AFGLQL
Trigger: CAGTTGAAGGCCAAATGCCCAACAAAAGTGAAAAAC...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR TCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCAAAGTACTTACTTTCTaGTCTAGCTGTGGACACAAA +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSKVLTF*SSCGHK
Trigger: TTTGTGTCCACAGCTAGATCAGAAAGTAAGTACTTT...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR GCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCATTTATTCCCAGTATTaGTTTGCACTAGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLIYSQY*FALALQ
Trigger: TTGGAGTGCTAGTGCAAAGCAATACTGGGAATAAAT...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTTTTCTCCTTCCCATTaGCATTTTCCGAAGAATTGT +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSFSPSH*HFPKNC
Trigger: ACAATTCTTCGGAAAATGGCAATGGGAAGGAGAAAA...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTTTTTCTCCTTCCCATTaGCATTTTCCGAAGAATTGT +
Preference number: 4 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFFSPSH*HFPKNC
Trigger: ACAATTCTTCGGAAAATGGCAATGGGAAGGAGAAAA...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR GCA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCACTGCTTTCAGTATTTaGAGGGAATTCTTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSTAFSI*REFFKS
Trigger: GCTTTTAAAGAATTCCCTGCAAATACTGAAAGCAGT...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR GCA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCACTGCTTTCAGTATTTaGAGGGAATTCTTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLTAFSI*REFFKS
Trigger: GCTTTTAAAGAATTCCCTGCAAATACTGAAAGCAGT...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS GCA 90 bp GCTGTCGCCGCTGCTGCCGCCGCCGCCGCCGCCACCGCCTCCCGGTaGCCGGGTCCCGCAGCCGCGGCTGAGTCCTTCTCCTCAGGACCG +
Preference number: 5 (lower is better)
Translates to: AVAAAAAAAAATASR*PGPAAAAESFSSGP
Trigger: CGGTCCTGAGGAGAAGGACTCAGCCGCGGCTGCGGGACCCGGGCACCGGGAGGCGGTGGCGGCGGCGGCGGCGGCAGCAGCGGCGACAGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS GCA 90 bp AAGGCGAGATGGAGTTCAGGGGCGTTATTCCACCATTCAGCCCTCTaGGGTGATCTCGGCCTTGGGAACCTCCCCAGCCACCATATCCAC +
Preference number: 5 (lower is better)
Translates to: KARWSSGALFHHSAL*GDLGLGNLPSHHIH
Trigger: GTGGATATGGTGGCTGGGGAGGTTCCCAAGGCCGAGATCACCGCAGAGGGCTGAATGGTGGAATAACGCCCCTGAACTCCATCTCGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000519835.5
ENST00000520867.5
CDS-3UTR CAA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGCGGTGATCTCGGCCTaGGGAACCTCCCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRAVISA*GTSPAT
Trigger: GGTGGCTGGGGAGGTTCCCAAGGCCGAGATCACCGC...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGTCGCAGGGTGCAGTTTaGGCCTCTGGGGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVSQGAV*ASGAVP
Trigger: AGGAACAGCCCCAGAGGCCAAAACTGCACCCTGCGA...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACGCTGGGGGTGGCATTTaGGTGATGGTGTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHAGGGI*VMVWRL
Trigger: CAGCCTCCACACCATCACCAAAATGCCACCCCCAGC...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGGGCAGGAGACCTCCTTaGCTGCTGATGCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVGRRPP*LLMLAV
Trigger: CACAGCCAGCATCAGCAGCAAAGGAGGTCTCCTGCC...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS CCA 90 bp TACCCTGGTCCCGCAGTCCCCGCTGTCGTTGTTGAGGACTCCTCCTaGTTCTTCTTTTTCTTTCCTTCTTCCTCCTCTTCCTCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: YPGPAVPAVVVEDSS*FFFFFPSSSSSSSA
Trigger: AGCAGAGGAGGAAGAGGAGGAAGAAGGAAAGAAAAAGAAGAACCAGGAGGAGTCCTCAACAACGACAGCGGGGACTGCGGGACCAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACGGACCCAGGGGCGGTTaGTTCAGTTCCCTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNGPRGG*FSSLSS
Trigger: CGAACTGAGGGAACTGAACAAACCGCCCCTGGGTCC...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGACTCCGGGTGCAGATCTaGCTGCGGTCGCTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRLRVQI*LRSLFL
Trigger: CAGGAACAGCGACCGCAGCAAGATCTGCACCCGGAG...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAGGCAGGAGACCTCCTTaGCTGCTGATGCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLGRRPP*LLMLAV
Trigger: CACAGCCAGCATCAGCAGCAAAGGAGGTCTCCTGCC...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGAGGAAGAGGAGGGTGTaGGTGACGGACTCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVRKRRV*VTDSGS
Trigger: GCTACCAGAGTCCGTCACCAACACCCTCCTCTTCCT...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCGCGGTGATCTCGGCCTaGGGAACCTCCCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGAVISA*GTSPAT
Trigger: GGTGGCTGGGGAGGTTCCCAAGGCCGAGATCACCGC...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGCTGGGGGTGGCATTTaGGTGATGGTGTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRAGGGI*VMVWRL
Trigger: CAGCCTCCACACCATCACCAAAATGCCACCCCCAGC...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAAGGAAGAGGAGGGTGTaGGTGACGGACTCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLRKRRV*VTDSGS
Trigger: GCTACCAGAGTCCGTCACCAACACCCTCCTCTTCCT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACTCCTTCACCAGGGGCTaGTGGAATTCCCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNSFTRG*WNSLPA
Trigger: TGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGA...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACATGTCAAGGGTTGGGTaGAAGTACCTAGCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHMSRVG*KYLAQW
Trigger: CCACTGGGCTAGGTACTTCAACCCAACCCTTGACAT...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGATCCTTCACCAGGGGCTaGTGGAATTCCCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRSFTRG*WNSLPA
Trigger: TGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGA...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTTGTTTCTCCTCACGGTaGCTGGGCCGTCGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSCFSSR*LGRRRR
Trigger: ACGGCGGCGACGGCCCAGCAACCGTGAGGAGAAACA...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTACTTCCTGACCTGGACTaGGGGAAAGCTGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLLPDLD*GKAAAF
Trigger: AAAAGCAGCAGCTTTCCCCAAGTCCAGGTCAGGAAG...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAATGTCAAGGGTTGGGTaGAAGTACCTAGCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLMSRVG*KYLAQW
Trigger: CCACTGGGCTAGGTACTTCAACCCAACCCTTGACAT...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGTCCCCGCTGTCGTTGTaGAGGACTCCTCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGSPLSL*RTPPGS
Trigger: AGAACCAGGAGGAGTCCTCAACAACGACAGCGGGGA...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTACCCGTTTCTCCCTCTaGCGGGGGTCGCGATCAGGA +
Preference number: 5 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSTRFSL*RGSRSG
Trigger: TCCTGATCGCGACCCCCGCAAGAGGGAGAAACGGGT...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp TCACTGCAAGTTTTATTTTGCATTCTGCAGAGGTCTGTGTATGGAGAAGTATATGCGGTGATCTCGGCCTaGGGAACCTCCCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: SLQVLFCILQRSVYGEVYAVISA*GTSPAT
Trigger: GGTGGCTGGGGAGGTTCCCAAGGCCGAGATCACCGC...ATATACTTCTCCATACACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTGCGGTGATCTCGGCCTaGGGAACCTCCCCAGCCACC +
Preference number: 5 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRAVISA*GTSPAT
Trigger: GGTGGCTGGGGAGGTTCCCAAGGCCGAGATCACCGC...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS GCA 90 bp AATGTTGTCAGCCCTGTTCAAGCTATCTTCCATCCAGGATTTAGGTaGAAAGGCAGAGCTGGGGCGAGCATACTTCTGGAGCTGAATATG +
Preference number: 5 (lower is better)
Translates to: NVVSPVQAIFHPGFR*KGRAGASILLELNM
Trigger: CATATTCAGCTCCAGAAGTATGCTCGCCCCAGCTCTGCCTTTGCACCTAAATCCTGGATGGAAGATAGCTTGAACAGGGCTGACAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000518141.1
ENST00000519152.5
ENST00000519835.5
ENST00000520867.5
ENST00000522344.1
CDS-3UTR CAA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTCAGTCCCCGCTGTCGTaGTTGAGGACTCCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSQSPLS*LRTPPG
Trigger: ACCAGGAGGAGTCCTCAACAACGACAGCGGGGACTG...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAATGTTGCAGGAAGTTaGGATCCTCTTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMNVAGS*DPLGFQ
Trigger: CTGGAAACCAAGAGGATCCAAACTTCCTGCAACATT...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGTTGACTTGGATCCAATaGGGCTTATTTTTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVLTWIQ*GLFLGG
Trigger: CCCTCCTAAAAATAAGCCCAATTGGATCCAAGTCAA...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp AGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGGATTTATTCCCAGTATaGCTTTGCACTAGCACTCCA +
Preference number: 5 (lower is better)
Translates to: RTCQREEVEEGVRMNRRVDLFPV*LCTSTP
Trigger: TGGAGTGCTAGTGCAAAGCAATACTGGGAATAAATC...CACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCGCTGGGGGTGGCATTTaGGTGATGGTGTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFAGGGI*VMVWRL
Trigger: CAGCCTCCACACCATCACCAAAATGCCACCCCCAGC...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCCTTCCTGACCTGGACTaGGGGAAAGCTGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGLPDLD*GKAAAF
Trigger: AAAAGCAGCAGCTTTCCCCAAGTCCAGGTCAGGAAG...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACCACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 5 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACTGGACTGGCTTATCCTaGATAGTGGGACTTGATACA +
Preference number: 5 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNWTGLS*IVGLDT
Trigger: TGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTATGGACTGGCTTATCCTaGATAGTGGGACTTGATACA +
Preference number: 5 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLWTGLS*IVGLDT
Trigger: TGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTCCTTCACCAGGGGCTaGTGGAATTCCCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRISFTRG*WNSLPA
Trigger: TGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGA...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTTCCTTCACCAGGGGCTaGTGGAATTCCCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PDGNTKKEFILFAVTQESSFTRG*WNSLPA
Trigger: TGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGA...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAAATGTTGCAGGAAGTTaGGATCCTCTTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: LQTATKGHASVKRLRKGSNVAGS*DPLGFQ
Trigger: CTGGAAACCAAGAGGATCCAAACTTCCTGCAACATT...TGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACGGCAAGTCTTTGGTTTaGAAGGATCCAAGATGGTAC +
Preference number: 5 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNGKSLV*KDPRWY
Trigger: GTACCATCTTGGATCCTTCAAAACCAAAGACTTGCC...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGTTGGGTTTTTCACTTTaGTTGGGCATTTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMLGFSL*LGIWPS
Trigger: TGAAGGCCAAATGCCCAACAAAAGTGAAAAACCCAA...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTATTGACTTGGATCCAATaGGGCTTATTTTTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLLTWIQ*GLFLGG
Trigger: CCCTCCTAAAAATAAGCCCAATTGGATCCAAGTCAA...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTAGATTTATTCCCAGTATaGCTTTGCACTAGCACTCCA +
Preference number: 5 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLDLFPV*LCTSTP
Trigger: TGGAGTGCTAGTGCAAAGCAATACTGGGAATAAATC...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGATGTCAAGGGTTGGGTaGAAGTACCTAGCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTMSRVG*KYLAQW
Trigger: CCACTGGGCTAGGTACTTCAACCCAACCCTTGACAT...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACCACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 5 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACTTACACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 5 (lower is better)
Translates to: CQREEVEEGVRMNRRVHLHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...TAAGTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp CTGTCACTGAGATTCCAAGGCCGAATCTGGACTGGCTTATCCTTGATAGTGGGACACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 5 (lower is better)
Translates to: LSLRFQGRIWTGLSLIVGHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...TCCCACTATCAAGGATAAGCCAGTCCAGATTCGGCCTTGGAATCTCAGTGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656232.1
CDS-3UTR CAA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGATGGACTGGCTTATCCTaGATAGTGGGACTTGATACA +
Preference number: 5 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRWTGLS*IVGLDT
Trigger: TGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp GACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAGCTATGTAACTCTGTaGATTAGAGAACGCAACTCT +
Preference number: 5 (lower is better)
Translates to: DCYKRTCQREEVEEGVRMSYVTL*IRERNS
Trigger: AGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCT...CATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTCCTTCACCAGGGGCTaGTGGAATTCCCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWSFTRG*WNSLPA
Trigger: TGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGA...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACGAAGTTTGGATCCTCTaGGTTTCCAGCAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNEVWIL*VSSKTR
Trigger: TCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTTC...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAAATGTTGCAGGAAGTTaGGATCCTCTTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRNVAGS*DPLGFQ
Trigger: CTGGAAACCAAGAGGATCCAAACTTCCTGCAACATT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAATGTTGCAGGAAGTTaGGATCCTCTTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRNVAGS*DPLGFQ
Trigger: CTGGAAACCAAGAGGATCCAAACTTCCTGCAACATT...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACGTCTTGCTTATGCATTaGTTTGCTCTAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHVLLMH*FALTCS
Trigger: AGAGCATGTTAGAGCAAACAAATGCATAAGCAAGAC...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR CAA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACGCGCAACTAGCAAGATaGCCATTCGATCATATTATT +
Preference number: 5 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHAQLAR*PFDHII
Trigger: AATAATATGATCGAATGGCAATCTTGCTAGTTGCGC...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS TCA 90 bp TGGCATTTTGGTGATGGTGTGGAGGCTGCAGATGTGGATGGAATCTaGCTGGAAAAGCAGATTTATTCCCAGTATTGCTTTGCACTAGCA +
Preference number: 5 (lower is better)
Translates to: WHFGDGVEAADVDGI*LEKQIYSQYCFALA
Trigger: TGCTAGTGCAAAGCAATACTGGGAATAAATCTGCTTTTCCAGTCAGATTCCATCCACATCTGCAGCCTCCACACCATCACCAAAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000519835.5
ENST00000520867.5
CDS TCA 90 bp TGCATCTTCATTGATTATTGTAGAGGAGGAAGGCGCTATCGCTGCTaGCCAGTTACTGAAACCAGTAAGAGACGATGCGCTAGATGTCAA +
Preference number: 5 (lower is better)
Translates to: CIFIDYCRGGRRYRC*PVTETSKRRCARCQ
Trigger: TTGACATCTAGCGCATCGTCTCTTACTGGTTTCAGTAACTGGTCAGCAGCGATAGCGCCTTCCTCCTCTACAATAATCAATGAAGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000519835.5
ENST00000520867.5
CDS-3UTR CAA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGATTGACTTGGATCCAATaGGGCTTATTTTTAGGAGGG +
Preference number: 5 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRLTWIQ*GLFLGG
Trigger: CCCTCCTAAAAATAAGCCCAATTGGATCCAAGTCAA...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp ACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGTGCACAAATCTCTTAAAACATaGACTTGGATCCAATTGGGC +
Preference number: 5 (lower is better)
Translates to: TCQREEVEEGVRMNRRVHKSLKT*TWIQLG
Trigger: GCCCAATTGGATCCAAGTCAATGTTTTAAGAGATTT...GTGCACTCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000520867.5
CDS-3UTR CAA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTGCTGGGGGTGGCATTTaGGTGATGGTGTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFAGGGI*VMVWRL
Trigger: CAGCCTCCACACCATCACCAAAATGCCACCCCCAGC...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCAGGCAGGAGACCTCCTTaGCTGCTGATGCTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPGRRPP*LLMLAV
Trigger: CACAGCCAGCATCAGCAGCAAAGGAGGTCTCCTGCC...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp ACCAGCTACACAAGAGCACCCTCCATTCGCATGACTGCTTTCAGTATTTGCAGGAGCTATGTAACTCTGTaGATTAGAGAACGCAACTCT +
Preference number: 5 (lower is better)
Translates to: TSYTRAPSIRMTAFSICRSYVTL*IRERNS
Trigger: AGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCT...CCTGCAAATACTGAAAGCAGTCATGCGAATGGAGGGTGCTCTTGTGTAGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAGAAGTTTGGATCCTCTaGGTTTCCAGCAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: KRTCQREEVEEGVRMNRREVWIL*VSSKTR
Trigger: TCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTTC...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTTTCGCCCATATGTCCTaGCTCAACACAGAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: PDGNTKKEFILFAVTQESFAHMS*LNTEAQ
Trigger: CTGGGCTTCTGTGTTGAGCAAGGACATATGGGCGAA...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519467.1
CDS-3UTR CAA 90 bp TGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAAATCTCTTAAAACATaGACTTGGATCCAATTGGGC +
Preference number: 5 (lower is better)
Translates to: CYKRTCQREEVEEGVRMNKSLKT*TWIQLG
Trigger: GCCCAATTGGATCCAAGTCAATGTTTTAAGAGATTT...GTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCAGGAAGAGGAGGGTGTaGGTGACGGACTCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSRKRRV*VTDSGS
Trigger: GCTACCAGAGTCCGTCACCAACACCCTCCTCTTCCT...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTAGGAAGAGGAGGGTGTaGGTGACGGACTCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFRKRRV*VTDSGS
Trigger: GCTACCAGAGTCCGTCACCAACACCCTCCTCTTCCT...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGCTATGTAACTCTGTaGATTAGAGAACGCAACTCT +
Preference number: 5 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRSYVTL*IRERNS
Trigger: AGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCT...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAAGAAGCTATGTAACTCTGTaGATTAGAGAACGCAACTCT +
Preference number: 5 (lower is better)
Translates to: KRTCQREEVEEGVRMNRRSYVTL*IRERNS
Trigger: AGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCT...TCTTCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000520867.5
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAATCCTTCACCAGGGGCTaGTGGAATTCCCTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: WQYEKGVHIVCSDTRIYKSFTRG*WNSLPA
Trigger: TGCTGGCAGGGAATTCCACAAGCCCCTGGTGAAGGA...TTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTAATGTTGCAGGAAGTTaGGATCCTCTTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFNVAGS*DPLGFQ
Trigger: CTGGAAACCAAGAGGATCCAAACTTCCTGCAACATT...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGGGGTCAGAATGAACAGAGTCTTGCTTATGCATTaGTTTGCTCTAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: YKRTCQREEVEEGVRMNRVLLMH*FALTCS
Trigger: AGAGCATGTTAGAGCAAACAAATGCATAAGCAAGAC...TCTGTTCATTCTGACCCCTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR CAA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCCGTAAGGTTTGGGAATaGCCAGATGAGAGAAAGGGG +
Preference number: 5 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIRKVWE*PDERKG
Trigger: CCCCTTTCTCTCATCTGGCAATTCCCAAACCTTACG...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCGATTTATTCCCAGTATaGCTTTGCACTAGCACTCCA +
Preference number: 5 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSDLFPV*LCTSTP
Trigger: TGGAGTGCTAGTGCAAAGCAATACTGGGAATAAATC...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTTTCCAGCCACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 5 (lower is better)
Translates to: SLSSKKMLQEVWILLVSSHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...GCTGGAAACCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGTGGACTGGCTTATCCTaGATAGTGGGACTTGATACA +
Preference number: 5 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTWTGLS*IVGLDT
Trigger: TGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCTCATTAATTCTAGCTTaGGTAGGTTTCCTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGSLILA*VGFLGL
Trigger: AAGCCCCAGGAAACCTACCAAAGCTAGAATTAATGA...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp CCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAGACTCTAAAATAGCATaGCCAGTGCACGACATTCAT +
Preference number: 5 (lower is better)
Translates to: PLGFQQNKRIKLPCNPMADSKIA*PVHDIH
Trigger: ATGAATGTCGTGCACTGGCAATGCTATTTTAGAGTC...TGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCCCTCAAGGCCCTTCATaGAATGCTCAACGTAAGGTT +
Preference number: 5 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRIPQGPS*NAQRKV
Trigger: AACCTTACGTTGAGCATTCAATGAAGGGCCTTGAGG...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTACTTCCTGACCTGGACTaGGGGAAAGCTGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: TKKEFILFAVTQESTKHLLPDLD*GKAAAF
Trigger: AAAAGCAGCAGCTTTCCCCAAGTCCAGGTCAGGAAG...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTCTTCCTGACCTGGACTaGGGGAAAGCTGCTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFLPDLD*GKAAAF
Trigger: AAAAGCAGCAGCTTTCCCCAAGTCCAGGTCAGGAAG...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCAATGTCAAGGGTTGGGTaGAAGTACCTAGCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPMSRVG*KYLAQW
Trigger: CCACTGGGCTAGGTACTTCAACCCAACCCTTGACAT...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTAATGTTGCAGGAAGTTaGGATCCTCTTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: PDGNTKKEFILFAVTQESNVAGS*DPLGFQ
Trigger: CTGGAAACCAAGAGGATCCAAACTTCCTGCAACATT...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp GGTCTGTGTATGGAGAAGTATATATATTATACCAAAGCGCAGGGACCAGAAGGGGCGCAACTAGCAAGATaGCCATTCGATCATATTATT +
Preference number: 5 (lower is better)
Translates to: GLCMEKYIYYTKAQGPEGAQLAR*PFDHII
Trigger: AATAATATGATCGAATGGCAATCTTGCTAGTTGCGC...CCCTTCTGGTCCCTGCGCTTTGGTATAATATATATACTTCTCCATACACAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGGCAAGTCTTTGGTTTaGAAGGATCCAAGATGGTAC +
Preference number: 5 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSGKSLV*KDPRWY
Trigger: GTACCATCTTGGATCCTTCAAAACCAAAGACTTGCC...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCTGCTGGGGCAAGTCTTaGGTTTTGAAGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFCWGKS*VLKDPR
Trigger: TCTTGGATCCTTCAAAACCAAAGACTTGCCCCAGCA...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp ATATATATTATACCAAAGCGCAGGGACCAGAAGGGGAAAGGAGAGGGTTCCTTTACTGCAAGTTTTATTTaGCATTCTGCAGAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: IYIIPKRRDQKGKGEGSFTASFI*HSAEVC
Trigger: ACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGT...AAAGGAACCCTCTCCTTTCCCCTTCTGGTCCCTGCGCTTTGGTATAATATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp GTTAAGTTACAGACTGCTACAAAAGGACATGCCAGCGTGAAGAGGTTGAGGAAGAGGAATATTATAGACTaGATAACCAAATGCCACCCA +
Preference number: 5 (lower is better)
Translates to: VKLQTATKGHASVKRLRKRNIID*ITKCHP
Trigger: TGGGTGGCATTTGGTTATCAAGTCTATAATATTCCT...CTTCCTCAACCTCTTCACGCTGGCATGTCCTTTTGTAGCAGTCTGTAACTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTCACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 5 (lower is better)
Translates to: PDGNTKKEFILFAVTQESHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTCACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 5 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTGGACTGGCTTATCCTaGATAGTGGGACTTGATACA +
Preference number: 5 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWWTGLS*IVGLDT
Trigger: TGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGAAGTTTGGATCCTCTaGGTTTCCAGCAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSEVWIL*VSSKTR
Trigger: TCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTTC...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGCATTACTTGATGAAGTaGGCACTTCAAACACTGACT +
Preference number: 5 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTHYLMK*ALQTLT
Trigger: AGTCAGTGTTTGAAGTGCCAACTTCATCAAGTAATG...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TCCTCTTGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCGCTCCCTTTCTATGTTaGAATATTAGACAGCAAATG +
Preference number: 5 (lower is better)
Translates to: SSWFPAKQENKTSMQPDGAPFLC*NIRQQM
Trigger: CATTTGCTGTCTAATATTCAAACATAGAAAGGGAGC...GCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCAAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TGGTTTCCAGCAAAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAACTAGACACCCACTaGCTAAAAGTTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: WFPAKQENKTSMQPDGNTKLDTH*LKVSLP
Trigger: TGGAAGTGAAACTTTTAGCAAGTGGGTGTCTAGTTT...CGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTTTGCTGGAAACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAGAAGTTTGGATCCTCTaGGTTTCCAGCAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSEVWIL*VSSKTR
Trigger: TCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTTC...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGTCATTAATTCTAGCTTaGGTAGGTTTCCTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWSLILA*VGFLGL
Trigger: AAGCCCCAGGAAACCTACCAAAGCTAGAATTAATGA...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TTAATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTGCTGGGGCAAGTCTTaGGTTTTGAAGGATCCAAGA +
Preference number: 5 (lower is better)
Translates to: LIIMLLSLAYAFVCSNMLCWGKS*VLKDPR
Trigger: TCTTGGATCCTTCAAAACCAAAGACTTGCCCCAGCA...GAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp AAACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCGACTCTAAAATAGCATaGCCAGTGCACGACATTCAT +
Preference number: 5 (lower is better)
Translates to: KQENKTSMQPDGNTKKEFDSKIA*PVHDIH
Trigger: ATGAATGTCGTGCACTGGCAATGCTATTTTAGAGTC...GAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp ACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCACTGCAAGTTTTATTTaGCATTCTGCAGAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: TRWQYEKGVHIVCSDTRITASFI*HSAEVC
Trigger: ACAGACCTCTGCAGAATGCAAAATAAAACTTGCAGT...GATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGGGTTTTTCACTTTTGTaGGGCATTTGGCCTTCAACT +
Preference number: 5 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWGFSLL*GIWPST
Trigger: AGTTGAAGGCCAAATGCCCAACAAAAGTGAAAAACC...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp AACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTAAAGAATTTTCCTCGTaGGGTAGGTTTAGGCAATCA +
Preference number: 5 (lower is better)
Translates to: NFHATRWQYEKGVHIVCSKEFSS*GRFRQS
Trigger: TGATTGCCTAAACCTACCCAACGAGGAAAATTCTTT...ACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp CCCGATGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTGAGAGGAAATCAGCATaGACTAATGGAAAGATGATT +
Preference number: 5 (lower is better)
Translates to: PDGNTKKEFILFAVTQESERKSA*TNGKMI
Trigger: AATCATCTTTCCATTAGTCAATGCTGATTTCCTCTC...AGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCATCGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp AACTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTGATTTATTCCCAGTATaGCTTTGCACTAGCACTCCA +
Preference number: 5 (lower is better)
Translates to: NSIGKIVSCHFIVIKCSRDLFPV*LCTSTP
Trigger: TGGAGTGCTAGTGCAAAGCAATACTGGGAATAAATC...ACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTATGGACTGGCTTATCCTaGATAGTGGGACTTGATACA +
Preference number: 5 (lower is better)
Translates to: TKKEFILFAVTQESTKHLWTGLS*IVGLDT
Trigger: TGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATGGACTGGCTTATCCTaGATAGTGGGACTTGATACA +
Preference number: 5 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPWTGLS*IVGLDT
Trigger: TGTATCAAGTCCCACTATCAAGGATAAGCCAGTCCA...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp CTCTATAGGCAAAATTGTCAGCTGTCACTTTATTGTCATAAAATGCTCCCGTTCAGCTATGTAACTCTGTaGATTAGAGAACGCAACTCT +
Preference number: 5 (lower is better)
Translates to: LYRQNCQLSLYCHKMLPFSYVTL*IRERNS
Trigger: AGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCT...GAACGGGAGCATTTTATGACAATAAAGTGACAGCTGACAATTTTGCCTATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp CTGGGGGAAAAACTGTCAGATAGACCGATAGTGTTATTGTTGCATGGTTATTTTAGCTATGTAACTCTGTaGATTAGAGAACGCAACTCT +
Preference number: 5 (lower is better)
Translates to: LGEKLSDRPIVLLLHGYFSYVTL*IRERNS
Trigger: AGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCT...AAAATAACCATGCAACAATAACACTATCGGTCTATCTGACAGTTTTTCCCCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR CAA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAGTCTTGCTTATGCATTaGTTTGCTCTAACATGCTCT +
Preference number: 5 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSVLLMH*FALTCS
Trigger: AGAGCATGTTAGAGCAAACAAATGCATAAGCAAGAC...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000657000.1
CDS-3UTR CAA 90 bp AACAAGAGAATAAAACTTCCATGCAACCCGATGGCAATACGAAAAAGGAGTTCAAAACTAGACACCCACTaGCTAAAAGTTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: NKRIKLPCNPMAIRKRSSKLDTH*LKVSLP
Trigger: TGGAAGTGAAACTTTTAGCAAGTGGGTGTCTAGTTT...TGAACTCCTTTTTCGTATTGCCATCGGGTTGCATGGAAGTTTTATTCTCTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTGGAGGAACTGGGAATaGGAAGTCAAAAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSWRNWE*EVKRDL
Trigger: CAAGTCTCTTTTGACTTCCAATTCCCAGTTCCTCCA...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp ATTGTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCACACAGAGCTTTCATCTaGAAACAGCAGGAATGCATA +
Preference number: 5 (lower is better)
Translates to: IVIKCSRSNIGNHTFRGPHRAFI*KQQECI
Trigger: TATGCATTCCTGCTGTTTCAAGATGAAAGCTCTGTG...TGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp TGGCAATACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAGAAGTTTGGATCCTCTaGGTTTCCAGCAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: WQYEKGVHIVCSDTRIYKEVWIL*VSSKTR
Trigger: TCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTTC...TTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGTATTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCGAAGTTTGGATCCTCTaGGTTTCCAGCAAAACAAGA +
Preference number: 5 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSEVWIL*VSSKTR
Trigger: TCTTGTTTTGCTGGAAACCAAGAGGATCCAAACTTC...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp AATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCTCTTGGCAGTTGAATACAATATaGTCCCGATTCTTACAATGC +
Preference number: 5 (lower is better)
Translates to: NISLSPLRKCCRKFGSSWQLNTI*SRFLQC
Trigger: GCATTGTAAGAATCGGGACAATATTGTATTCAACTG...CCAAGAGGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTAAGCTATGTAACTCTGTaGATTAGAGAACGCAACTCT +
Preference number: 5 (lower is better)
Translates to: TKKEFILFAVTQESTKHLSYVTL*IRERNS
Trigger: AGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCT...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCAGCTATGTAACTCTGTaGATTAGAGAACGCAACTCT +
Preference number: 5 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSSYVTL*IRERNS
Trigger: AGAGTTGCGTTCTCTAATCAACAGAGTTACATAGCT...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000517880.1
ENST00000519467.1
ENST00000522336.5
ENST00000657000.1
CDS-3UTR CAA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTCATTACTTGATGAAGTaGGCACTTCAAACACTGACT +
Preference number: 5 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFHYLMK*ALQTLT
Trigger: AGTCAGTGTTTGAAGTGCCAACTTCATCAAGTAATG...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp GTCATAAAATGCTCCCGTTCTAATATTGGTAATCACACATTTAGAGGACCATTTGCTCCCGTTCTAATATaGGTAATCACACATTTAGAG +
Preference number: 5 (lower is better)
Translates to: VIKCSRSNIGNHTFRGPFAPVLI*VITHLE
Trigger: CTCTAAATGTGTGATTACCAATATTAGAACGGGAGC...AAATGGTCCTCTAAATGTGTGATTACCAATATTAGAACGGGAGCATTTTATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519835.5
CDS-3UTR CAA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTAAAATCTCTTAAAACATaGACTTGGATCCAATTGGGC +
Preference number: 5 (lower is better)
Translates to: TKKEFILFAVTQESTKHLKSLKT*TWIQLG
Trigger: GCCCAATTGGATCCAAGTCAATGTTTTAAGAGATTT...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp ACGAAAAAGGAGTTCATATTGTTTGCAGTGACACAAGAATCTACAAAACACCTACAGTTGAATACAATATaGTCCCGATTCTTACAATGC +
Preference number: 5 (lower is better)
Translates to: TKKEFILFAVTQESTKHLQLNTI*SRFLQC
Trigger: GCATTGTAAGAATCGGGACAATATTGTATTCAACTG...TAGGTGTTTTGTAGATTCTTGTGTCACTGCAAACAATATGAACTCCTTTTTCGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265085.10
ENST00000334035.9
CDS-3UTR CAA 90 bp TCTTTTAATATTTCTCTCTCTCCTCTAAGAAAATGTTGCAGGAAGTTTGGATCCAACACATTACAGCACTaGGTAGTCCACATGATTAAT +
Preference number: 5 (lower is better)
Translates to: SFNISLSPLRKCCRKFGSNTLQH*VVHMIN
Trigger: ATTAATCATGTGGACTACCAAGTGCTGTAATGTGTT...GGATCCAAACTTCCTGCAACATTTTCTTAGAGGAGAGAGAGAAATATTAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS-3UTR CAA 90 bp ATTATAATGCTGCTCAGTCTTGCTTATGCATTTGTTTGCTCTAACATGCTCTTTGAACCTCTTCTAGTCTaGAGAATACTATACTCAAGA +
Preference number: 5 (lower is better)
Translates to: IIMLLSLAYAFVCSNMLFEPLLV*RILYSR
Trigger: TCTTGAGTATAGTATTCTCAAGACTAGAAGAGGTTC...AAAGAGCATGTTAGAGCAAACAAATGCATAAGCAAGACTGAGCAGCATTATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS CAA 72 bp ATCCACCACCGCCCGGGCTCCAGGAAGAGGAGGGTGTaGGTGACGGACTCTGGTAGCTGCTCCACGGAGAGG +
Preference number: 6 (lower is better)
Translates to: IHHRPGSRKRRV*VTDSGSCSTER
Trigger: CCTCTCCGTGGAGCAGCTACCAGAGTCCGTCACCAACACCCTCCTCTTCCTGGAGCCCGGGCGGTGGTGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000519835.5
ENST00000520867.5
CDS GCA 72 bp TGGAGTTCAGGGGCGTTATTCCACCATTCAGCCCTCTaGGGTGATCTCGGCCTTGGGAACCTCCCCAGCCAC +
Preference number: 6 (lower is better)
Translates to: WSSGALFHHSAL*GDLGLGNLPSH
Trigger: GTGGCTGGGGAGGTTCCCAAGGCCGAGATCACCGCAGAGGGCTGAATGGTGGAATAACGCCCCTGAACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000519835.5
ENST00000520867.5
CDS CAA 72 bp CTGGTCCTGTTTTCTGCTCTTTCGCAGGGTGCAGTTTaGGCCTCTGGGGCTGTTCCTGAGGCTCCGGGTGCA +
Preference number: 6 (lower is better)
Translates to: LVLFSALSQGAV*ASGAVPEAPGA
Trigger: TGCACCCGGAGCCTCAGGAACAGCCCCAGAGGCCAAAACTGCACCCTGCGAAAGAGCAGAAAACAGGACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS CAA 90 bp CTGCTGTTCCTGGTCCTGTTTTCTGCTCTTTCGCAGGGTGCAGTTTaGGCCTCTGGGGCTGTTCCTGAGGCTCCGGGTGCAGATCTTGCT +
Preference number: 6 (lower is better)
Translates to: LLFLVLFSALSQGAV*ASGAVPEAPGADLA
Trigger: AGCAAGATCTGCACCCGGAGCCTCAGGAACAGCCCCAGAGGCCAAAACTGCACCCTGCGAAAGAGCAGAAAACAGGACCAGGAACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS TCA 72 bp TTCAGGGGCGTTATTCCACCATTCAGCCCTCTGCGGTaGTCTCGGCCTTGGGAACCTCCCCAGCCACCATAT +
Preference number: 6 (lower is better)
Translates to: FRGVIPPFSPLR*SRPWEPPQPPY
Trigger: ATATGGTGGCTGGGGAGGTTCCCAAGGCCGAGATCACCGCAGAGGGCTGAATGGTGGAATAACGCCCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000519835.5
ENST00000520867.5
CDS CAA 72 bp CCCATGAAAGGGGTTGGAAACACCCGTTTCTCCCTCTaGCGGGGGTCGCGATCAGGAGGGATTAGCGAGACT +
Preference number: 6 (lower is better)
Translates to: PMKGVGNTRFSL*RGSRSGGISET
Trigger: AGTCTCGCTAATCCCTCCTGATCGCGACCCCCGCAAGAGGGAGAAACGGGTGTTTCCAACCCCTTTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS CCA 72 bp CCCGCAGTCCCCGCTGTCGTTGTTGAGGACTCCTCCTaGTTCTTCTTTTTCTTTCCTTCTTCCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PAVPAVVVEDSS*FFFFFPSSSSS
Trigger: GGAAGAGGAGGAAGAAGGAAAGAAAAAGAAGAACCAGGAGGAGTCCTCAACAACGACAGCGGGGACTGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS CAA 72 bp AACTATAATTTAGAAGGCTTTTGTTTCTCCTCACGGTaGCTGGGCCGTCGCCGCCGTCGCCGCTTTACCCTG +
Preference number: 6 (lower is better)
Translates to: NYNLEGFCFSSR*LGRRRRRRFTL
Trigger: CAGGGTAAAGCGGCGACGGCGGCGACGGCCCAGCAACCGTGAGGAGAAACAAAAGCCTTCTAAATTATAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265085.10
CDS GCA 72 bp AGCCCTGTTCAAGCTATCTTCCATCCAGGATTTAGGTaGAAAGGCAGAGCTGGGGCGAGCATACTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: SPVQAIFHPGFR*KGRAGASILLE
Trigger: CTCCAGAAGTATGCTCGCCCCAGCTCTGCCTTTGCACCTAAATCCTGGATGGAAGATAGCTTGAACAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000518141.1
ENST00000519152.5
ENST00000519835.5
ENST00000520867.5
ENST00000522344.1
CDS GCA 72 bp GCTCTCATTATGTCAATGAGTGAACTCTCCAGTGAGTaGATGTCGAATGTCCTGGGGCGATCCGGAAAAGGA +
Preference number: 6 (lower is better)
Translates to: ALIMSMSELSSE*MSNVLGRSGKG
Trigger: TCCTTTTCCGGATCGCCCCAGGACATTCGACATGCACTCACTGGAGAGTTCACTCATTGACATAATGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265085.10
ENST00000334035.9
ENST00000519152.5
ENST00000519835.5
ENST00000520867.5
ENST00000522344.1
CDS GCA 72 bp GCTCTCATTATGTCAATGAGTGAACTCTCCAGTGAGTaGATGTCGAATGTCCTGGGGCGATCTTCTTTAGAC +
Preference number: 6 (lower is better)
Translates to: ALIMSMSELSSE*MSNVLGRSSLD
Trigger: GTCTAAAGAAGATCGCCCCAGGACATTCGACATGCACTCACTGGAGAGTTCACTCATTGACATAATGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517880.1
ENST00000522336.5