RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPEB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000107864

Ensembl transcript IDs: ENST00000265997.5, ENST00000412050.8, ENST00000614585.4

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGACAGTGGTGACATCCGAGTGTGCTTCCTCAGTGCCACCAACTaGGCCTTACAGGGAGGCAGCATGAGTGAGACCCTGCAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: TDSGDIRVCFLSATN*ALQGGSMSETLQVR
Trigger: CCTCACCTGCAGGGTCTCACTCATGCTGCCTCCCTGTAAGGCTCAGTTGGTGGCACTGAGGAAGCACACTCGGATGTCACCACTGTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR GCA 90 bp GCAAGGGGCACCAGAACAGGAAGCAGGCATGGGTGTGGAGGAAGATaGAACCCGACACATAGTCAGGGTCCACAGACAGTGGTGACATCC +
Preference number: 1 (lower is better)
Translates to: ARGTRTGSRHGCGGR*NPTHSQGPQTVVTS
Trigger: GGATGTCACCACTGTCTGTGGACCCTGACTATGTGTCGGGTTGCATCTTCCTCCACACCCATGCCTGCTTCCTGTTCTGGTGCCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR TCA 90 bp AGCAGCAGCAGAAAGGCAGACAGATCATGCACGCAGTTGCCACAATaGAAGGCAAGGGGCACCAGAACAGGAAGCAGGCATGGGTGTGGA +
Preference number: 1 (lower is better)
Translates to: SSSRKADRSCTQLPQ*KARGTRTGSRHGCG
Trigger: TCCACACCCATGCCTGCTTCCTGTTCTGGTGCCCCTTGCCTTTCATTGTGGCAACTGCGTGCATGATCTGTCTGCCTTTCTGCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR TCA 90 bp GAGGAAGATGCAACCCGACACATAGTCAGGGTCCACAGACAGTGGTaGCATCCGAGTGTGCTTCCTCAGTGCCACCAACTGAGCCTTACA +
Preference number: 1 (lower is better)
Translates to: EEDATRHIVRVHRQW*HPSVLPQCHQLSLT
Trigger: TGTAAGGCTCAGTTGGTGGCACTGAGGAAGCACACTCGGATGTCACCACTGTCTGTGGACCCTGACTATGTGTCGGGTTGCATCTTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR GCA 90 bp GTTGGAAAAGCAGCAGCAGAAAGGCAGACAGATCATGCACGCAGTTaGCACAATGAAAGGCAAGGGGCACCAGAACAGGAAGCAGGCATG +
Preference number: 1 (lower is better)
Translates to: VGKAAAERQTDHARS*HNERQGAPEQEAGM
Trigger: CATGCCTGCTTCCTGTTCTGGTGCCCCTTGCCTTTCATTGTGGCAACTGCGTGCATGATCTGTCTGCCTTTCTGCTGCTGCTTTTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 90 bp CAGTGGTACTTCGGTTGGGTGACTTCATTCTCAGGGCCACAGGTTTaGCTGCACCTGGTGTTGTATAAATCCACCGTGACATCCCTAGAG +
Preference number: 1 (lower is better)
Translates to: QWYFGWVTSFSGPQV*LHLVLYKSTVTSLE
Trigger: CTCTAGGGATGTCACGGTGGATTTATACAACACCAGGTGCAGCCAAACCTGTGGCCCTGAGAATGAAGTCACCCAACCGAAGTACCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 90 bp TCGGCCTGGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTaGCAGTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACA +
Preference number: 1 (lower is better)
Translates to: SAWEKGTVSHKDSSW*QFFSLSLSLSLTHT
Trigger: TGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCCAGGCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 90 bp GATTCGGCCTGGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTaGTGGCAGTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCACACAC +
Preference number: 1 (lower is better)
Translates to: DSAWEKGTVSHKDSS*WQFFSLSLSLSLTH
Trigger: GTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCCAGGCCGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 90 bp ATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTaGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: MTPISPLSVHIKDSA*EKGTVSHKDSSWWQ
Trigger: CTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR GCA 90 bp ATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTaGAGTTGTAGTTTTTGCTTTGACTGTAGGTGCTATTGCAATGAC +
Preference number: 1 (lower is better)
Translates to: IWIKSLAVLFTQHQF*SCSFCFDCRCYCND
Trigger: GTCATTGCAATAGCACCTACAGTCAAAGCAAAAACTACAACTGCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 90 bp CATCAACCACTAGTAGAAACATATCATCTATCTGGATCAAGTCATTaGCTGTTCTGTTTACGCAACACCAGTTTTGCAGTTGTAGTTTTT +
Preference number: 1 (lower is better)
Translates to: HQPLVETYHLSGSSH*LFCLRNTSFAVVVF
Trigger: AAAAACTACAACTGCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGATATGTTTCTACTAGTGGTTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTCAGGGCCACAGGTTTaGCTGCACCTGGTGTTGTAT +
Preference number: 2 (lower is better)
Translates to: QVRSAVHHESRVLLATSCSGPQV*LHLVLY
Trigger: ATACAACACCAGGTGCAGCCAAACCTGTGGCCCTGA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACGGTACTTCGGTTGGGTaGCTTCATTCTCAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: SDITTVSAHKRFGLGERHGTSVG*LHSQGH
Trigger: GTGGCCCTGAGAATGAAGTCACCCAACCGAAGTACC...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR GCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTGCTTCCCAGTCAAGTTaGAGGTCAGAACACCTCTGT +
Preference number: 2 (lower is better)
Translates to: QVRSAVHHESRVLLATSCASQSS*RSEHLC
Trigger: ACAGAGGTGTTCTGACCTGCAACTTGACTGGGAAGC...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTCAGTGGTACTTCGGTTaGGTGACTTCATTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: QVRSAVHHESRVLLATSCQWYFG*VTSFSG
Trigger: CCCTGAGAATGAAGTCACCCAACCGAAGTACCACTG...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CAA 90 bp AGATTCGGCCTGGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTaGGTGGCAGTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCACACA +
Preference number: 2 (lower is better)
Translates to: RFGLGERHCLTQGQQ*VAVFLSLSLSLSHT
Trigger: TGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCCAGGCCGAATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCGAGCATTCCATTTATTaGGGCATGCCTTCCTCCGGT +
Preference number: 2 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLEHSIY*GMPSSG
Trigger: ACCGGAGGAAGGCATGCCTCAATAAATGGAATGCTC...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTCTGCAGCCCAAGGGTaGATGCTAGAAAAATGTCCA +
Preference number: 2 (lower is better)
Translates to: QVRSAVHHESRVLLATSCSAAQG*MLEKCP
Trigger: TGGACATTTTTCTAGCATTCACCCTTGGGCTGCAGA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGTGAGACCCTGCAGGTaGGGTCTGCAGTACACCACG +
Preference number: 2 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCVRPCR*GLQYTT
Trigger: CGTGGTGTACTGCAGACCTCACCTGCAGGGTCTCAC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCTCAGTGCCACCAACTaGGCCTTACAGGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCLSATN*ALQGGS
Trigger: GCTGCCTCCCTGTAAGGCTCAGTTGGTGGCACTGAG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCAGGTTTGGCTGCACCTaGTGTTGTATAAATCCACCG +
Preference number: 2 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLRFGCT*CCINPP
Trigger: CGGTGGATTTATACAACACCAGGTGCAGCCAAACCT...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACCAGTGGTACTTCGGTTaGGTGACTTCATTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SDITTVSAHKRFGLGERHQWYFG*VTSFSG
Trigger: CCCTGAGAATGAAGTCACCCAACCGAAGTACCACTG...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CAA 90 bp AGAGCATACCCAAGACCAACTCTGGACACAAGTTTCTCTGAGTTATaGATGAACCTCGCCTCCATAGCGATGGAGCTGAAAGAGGCCATC +
Preference number: 2 (lower is better)
Translates to: RAYPRPTLDTSFSEL*MNLASIAMELKEAI
Trigger: GATGGCCTCTTTCAGCTCCATCGCTATGGAGGCGAGGTTCATCAATAACTCAGAGAAACTTGTGTCCAGAGTTGGTCTTGGGTATGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTGAACACTGTAAGCCCTaGGGCAGTGCCCTCTCTTTT +
Preference number: 2 (lower is better)
Translates to: LLWALPIQSIPFIEACLPEHCKP*GSALSF
Trigger: AAAAGAGAGGGCACTGCCTCAGGGCTTACAGTGTTC...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACGGCCACAGGTTTGGCTaGACCTGGTGTTGTATAAAT +
Preference number: 2 (lower is better)
Translates to: SDITTVSAHKRFGLGERHGHRFG*TWCCIN
Trigger: ATTTATACAACACCAGGTGCAGCCAAACCTGTGGCC...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGGTACTTCGGTTGGGTaGCTTCATTCTCAGGGCCAC +
Preference number: 2 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCGTSVG*LHSQGH
Trigger: GTGGCCCTGAGAATGAAGTCACCCAACCGAAGTACC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACCCATTTATTGAGGCATaGCTTCCTCCGGTCAATTAC +
Preference number: 2 (lower is better)
Translates to: SDITTVSAHKRFGLGERHPFIEA*LPPVNY
Trigger: GTAATTGACCGGAGGAAGGCATGCCTCAATAAATGG...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGAACACTGTAAGCCCTaGGGCAGTGCCCTCTCTTTT +
Preference number: 2 (lower is better)
Translates to: SILISVRQLTLSLKSQKCEHCKP*GSALSF
Trigger: AAAAGAGAGGGCACTGCCTCAGGGCTTACAGTGTTC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTATTGCTGAATTGTTGTaGAGTTTTTGCTACATCTGC +
Preference number: 2 (lower is better)
Translates to: QVRSAVHHESRVLLATSCIAELL*SFCYIC
Trigger: GCAGATGTAGCAAAAACTTCACAACAATTCAGCAAT...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACTTTCTGGACAAGGTCTaGAGCTATGTAAAATGGTGC +
Preference number: 2 (lower is better)
Translates to: SDITTVSAHKRFGLGERHFLDKV*SYVKWC
Trigger: GCACCATTTTACATAGCTTCAGACCTTGTCCAGAAA...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAGGCCACAGGTTTGGCTaGACCTGGTGTTGTATAAAT +
Preference number: 2 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEGHRFG*TWCCIN
Trigger: ATTTATACAACACCAGGTGCAGCCAAACCTGTGGCC...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR GCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGGGTGTGGAGGAAGATaGAACCCGACACATAGTCAG +
Preference number: 2 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCGCGGR*NPTHSQ
Trigger: CTGACTATGTGTCGGGTTGCATCTTCCTCCACACCC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATCACAGACAGTAGCCTaGCGGCCGCTGATGAGAATG +
Preference number: 2 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNISQTVA*RPLMRM
Trigger: CATTCTCATCAGCGGCCGTCAGGCTACTGTCTGTGA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTACCATCCACAAATTTaGTTGAAGAATATCCTACAC +
Preference number: 2 (lower is better)
Translates to: QVRSAVHHESRVLLATSCYHPQI*LKNILH
Trigger: GTGTAGGATATTCTTCAAGCAAATTTGTGGATGGTA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTTATCCTTACTCTAAGTaGCCCGAGCTAATGATTGCT +
Preference number: 2 (lower is better)
Translates to: LLWALPIQSIPFIEACLPYPYSK*PELMIA
Trigger: AGCAATCATTAGCTCGGGTCACTTAGAGTAAGGATA...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATTCACAGACAGTAGCCTaGCGGCCGCTGATGAGAATG +
Preference number: 2 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNSQTVA*RPLMRM
Trigger: CATTCTCATCAGCGGCCGTCAGGCTACTGTCTGTGA...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACCTGAAAATAAGTGCATaGTCCAGTTCAAAACAATCA +
Preference number: 2 (lower is better)
Translates to: SDITTVSAHKRFGLGERHLKISA*SSSKQS
Trigger: TGATTGTTTTGAACTGGAGCATGCACTTATTTTCAG...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACGTTTCTGAAAATAAGTaGATGCTCCAGTTCAAAACA +
Preference number: 2 (lower is better)
Translates to: SDITTVSAHKRFGLGERHVSENK*MLQFKT
Trigger: TGTTTTGAACTGGAGCATGCACTTATTTTCAGAAAC...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR GCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCCATTTATTGAGGCATaGCTTCCTCCGGTCAATTAC +
Preference number: 2 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCPFIEA*LPPVNY
Trigger: GTAATTGACCGGAGGAAGGCATGCCTCAATAAATGG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CAA 90 bp AGGTCATTCTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATaGAGGCATGCCTTCCTCCGGTCAATTACCAATTCTTTGAATGAA +
Preference number: 2 (lower is better)
Translates to: RSFCYGLFPFRAFHL*RHAFLRSITNSLNE
Trigger: TTCATTCAAAGAATTGGTAATTGACCGGAGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAGAATGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGAACACTGTAAGCCCTaGGGCAGTGCCCTCTCTTTT +
Preference number: 2 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNEHCKP*GSALSF
Trigger: AAAAGAGAGGGCACTGCCTCAGGGCTTACAGTGTTC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAAAATCGAGAACGAATaGACAGATTTCCAGAACACT +
Preference number: 2 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEKIENE*TDFQNT
Trigger: AGTGTTCTGGAAATCTGTGCATTCGTTCTCGATTTT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTAGGTGTGAATCAAAGTaGAAATCAGTACCATTCTAC +
Preference number: 2 (lower is better)
Translates to: LLWALPIQSIPFIEACLPRCESK*KSVPFY
Trigger: GTAGAATGGTACTGATTTGCACTTTGATTCACACCT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTATCCTTACTCTAAGTaGCCCGAGCTAATGATTGCT +
Preference number: 2 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSYPYSK*PELMIA
Trigger: AGCAATCATTAGCTCGGGTCACTTAGAGTAAGGATA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTCTGCAGCCCAAGGGTaGATGCTAGAAAAATGTCCA +
Preference number: 2 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVSAAQG*MLEKCP
Trigger: TGGACATTTTTCTAGCATTCACCCTTGGGCTGCAGA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTACACTCTGCAATTCTaGATTATACTGGACACTGAG +
Preference number: 2 (lower is better)
Translates to: SILISVRQLTLSLKSQKCYTLQF*IILDTE
Trigger: CTCAGTGTCCAGTATAATGCAGAATTGCAGAGTGTA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAGGTGTGAATCAAAGTaGAAATCAGTACCATTCTAC +
Preference number: 2 (lower is better)
Translates to: LKSILISVRQLTLSLKSQRCESK*KSVPFY
Trigger: GTAGAATGGTACTGATTTGCACTTTGATTCACACCT...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTATTGCTGAATTGTTGTaGAGTTTTTGCTACATCTGC +
Preference number: 2 (lower is better)
Translates to: SILISVRQLTLSLKSQKCIAELL*SFCYIC
Trigger: GCAGATGTAGCAAAAACTTCACAACAATTCAGCAAT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCGAGCTAATGATTGCTaGATTGTTGTGAAGTTTTTG +
Preference number: 2 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCRANDC*IVVKFL
Trigger: CAAAAACTTCACAACAATTCAGCAATCATTAGCTCG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACTGAAAATAAGTGCATaGTCCAGTTCAAAACAATCA +
Preference number: 2 (lower is better)
Translates to: LKSILISVRQLTLSLKSQLKISA*SSSKQS
Trigger: TGATTGTTTTGAACTGGAGCATGCACTTATTTTCAG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGTTTCTGAAAATAAGTaGATGCTCCAGTTCAAAACA +
Preference number: 2 (lower is better)
Translates to: LKSILISVRQLTLSLKSQVSENK*MLQFKT
Trigger: TGTTTTGAACTGGAGCATGCACTTATTTTCAGAAAC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAGTTTTTGCTACATCTaGCACCTACTCACGAGTATT +
Preference number: 2 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSFCYI*HLLTSI
Trigger: AATACTCGTGAGTAGGTGGCAGATGTAGCAAAAACT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR CAA 90 bp CCATCAACCACTAGTAGAAACATATCATCTATCTGGATCAAGTCATaGGCTGTTCTGTTTACGCAACACCAGTTTTGCAGTTGTAGTTTT +
Preference number: 2 (lower is better)
Translates to: PSTTSRNISSIWIKS*AVLFTQHQFCSCSF
Trigger: AAAACTACAACTGCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGATATGTTTCTACTAGTGGTTGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATATCCTTACTCTAAGTaGCCCGAGCTAATGATTGCT +
Preference number: 2 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKYPYSK*PELMIA
Trigger: AGCAATCATTAGCTCGGGTCACTTAGAGTAAGGATA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAAAATCGAGAACGAATaGACAGATTTCCAGAACACT +
Preference number: 2 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSKIENE*TDFQNT
Trigger: AGTGTTCTGGAAATCTGTGCATTCGTTCTCGATTTT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATACACTCTGCAATTCTaGATTATACTGGACACTGAG +
Preference number: 2 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIYTLQF*IILDTE
Trigger: CTCAGTGTCCAGTATAATGCAGAATTGCAGAGTGTA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCCATTTATTGAGGCATaGCTTCCTCCGGTCAATTAC +
Preference number: 2 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNPFIEA*LPPVNY
Trigger: GTAATTGACCGGAGGAAGGCATGCCTCAATAAATGG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAAAAAGATCCAGCTTATaGGGTATCCTTACAAGTCAA +
Preference number: 2 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIKRSSL*GILTSQ
Trigger: TTGACTTGTAAGGATACCTCATAAGCTGGATCTTTT...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGTTTGTAAGCTAAGATaGGCTCTTTGGTTTTCTGGA +
Preference number: 2 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVVCKLR*ALWFSG
Trigger: TCCAGAAAACCAAAGAGCTCATCTTAGCTTACAAAC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTACACTCTGCAATTCTaGATTATACTGGACACTGAG +
Preference number: 2 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVYTLQF*IILDTE
Trigger: CTCAGTGTCCAGTATAATGCAGAATTGCAGAGTGTA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTAGTTTTTGCTACATCTaGCACCTACTCACGAGTATT +
Preference number: 2 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVSFCYI*HLLTSI
Trigger: AATACTCGTGAGTAGGTGGCAGATGTAGCAAAAACT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAGACTTAAATCTATTCTaGAGTGTCATATCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIDLNLF*SVISSQ
Trigger: CTGACTGGATATGACACTGCAGAATAGATTTAAGTC...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAATTGCTGAATTGTTGTaGAGTTTTTGCTACATCTGC +
Preference number: 2 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKIAELL*SFCYIC
Trigger: GCAGATGTAGCAAAAACTTCACAACAATTCAGCAAT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACGAGCTAATGATTGCTaGATTGTTGTGAAGTTTTTG +
Preference number: 2 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKRANDC*IVVKFL
Trigger: CAAAAACTTCACAACAATTCAGCAATCATTAGCTCG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAAAAAGATCCAGCTTATaGGGTATCCTTACAAGTCAA +
Preference number: 2 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKKRSSL*GILTSQ
Trigger: TTGACTTGTAAGGATACCTCATAAGCTGGATCTTTT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTAAACAAACTATAGCTTaGGAGCCAGTAATTGCAACT +
Preference number: 2 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVKQTIA*EPVIAT
Trigger: AGTTGCAATTACTGGCTCTCAAGCTATAGTTTGTTT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAAGGTGTGAATCAAAGTaGAAATCAGTACCATTCTAC +
Preference number: 2 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKRCESK*KSVPFY
Trigger: GTAGAATGGTACTGATTTGCACTTTGATTCACACCT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATTATATATTACTATCTaGAGCCCAAGGGTGAATGCT +
Preference number: 2 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKLYITI*SPRVNA
Trigger: AGCATTCACCCTTGGGCTGCAGATAGTAATATATAA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGACTTAAATCTATTCTaGAGTGTCATATCCAGTCAG +
Preference number: 2 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVDLNLF*SVISSQ
Trigger: CTGACTGGATATGACACTGCAGAATAGATTTAAGTC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR CAA 90 bp AAAGAGCAGAAGTTATCCTGTGTTAGCACCCAAGTTTTCTACTTGTaGCAATTAACTTTGTCGTCATACAAATTTAAACATCCCCTAATC +
Preference number: 2 (lower is better)
Translates to: KEQKLSCVSTQVFYL*QLTLSSYKFKHPLI
Trigger: GATTAGGGGATGTTTAAATTTGTATGACGACAAAGTTAATTGCAACAAGTAGAAAACTTGGGTGCTAACACAGGATAACTTCTGCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCGAGCTAATGATTGCTaGATTGTTGTGAAGTTTTTG +
Preference number: 2 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNRANDC*IVVKFL
Trigger: CAAAAACTTCACAACAATTCAGCAATCATTAGCTCG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCTGAAAATAAGTGCATaGTCCAGTTCAAAACAATCA +
Preference number: 2 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVLKISA*SSSKQS
Trigger: TGATTGTTTTGAACTGGAGCATGCACTTATTTTCAG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGTTTCTGAAAATAAGTaGATGCTCCAGTTCAAAACA +
Preference number: 2 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNVSENK*MLQFKT
Trigger: TGTTTTGAACTGGAGCATGCACTTATTTTCAGAAAC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR TCA 72 bp GCAACCCGACACATAGTCAGGGTCCACAGACAGTGGTaGCATCCGAGTGTGCTTCCTCAGTGCCACCAACTG +
Preference number: 3 (lower is better)
Translates to: ATRHIVRVHRQW*HPSVLPQCHQL
Trigger: CAGTTGGTGGCACTGAGGAAGCACACTCGGATGTCACCACTGTCTGTGGACCCTGACTATGTGTCGGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR TCA 72 bp AGAAAGGCAGACAGATCATGCACGCAGTTGCCACAATaGAAGGCAAGGGGCACCAGAACAGGAAGCAGGCAT +
Preference number: 3 (lower is better)
Translates to: RKADRSCTQLPQ*KARGTRTGSRH
Trigger: ATGCCTGCTTCCTGTTCTGGTGCCCCTTGCCTTTCATTGTGGCAACTGCGTGCATGATCTGTCTGCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCCCAGTGGTACTTCGGTaGGGTGACTTCATTCTCAGG +
Preference number: 3 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLPVVLR*GDFILR
Trigger: CCTGAGAATGAAGTCACCCAACCGAAGTACCACTGG...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAACTCAGGGCCACAGGTTaGGCTGCACCTGGTGTTGTA +
Preference number: 3 (lower is better)
Translates to: YDSDITTVSAHKRFGLGELRATG*AAPGVV
Trigger: TACAACACCAGGTGCAGCCAAACCTGTGGCCCTGAG...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 72 bp TTCGGTTGGGTGACTTCATTCTCAGGGCCACAGGTTTaGCTGCACCTGGTGTTGTATAAATCCACCGTGACA +
Preference number: 3 (lower is better)
Translates to: FGWVTSFSGPQV*LHLVLYKSTVT
Trigger: TGTCACGGTGGATTTATACAACACCAGGTGCAGCCAAACCTGTGGCCCTGAGAATGAAGTCACCCAACCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATATCTACTCCAGTACTaGTGGCTGGGTCGGCCCGTG +
Preference number: 3 (lower is better)
Translates to: LKSILISVRQLTLSLKSQYLLQY*WLGRPV
Trigger: CACGGGCCGACCCAGCCACAAGTACTGGAGTAGATA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR CAA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACAGAGCATTCCATTTATaGAGGCATGCCTTCCTCCGG +
Preference number: 3 (lower is better)
Translates to: SDITTVSAHKRFGLGERHRAFHL*RHAFLR
Trigger: CCGGAGGAAGGCATGCCTCAATAAATGGAATGCTCT...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 72 bp GAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTaGCAGTTTTTCTCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: EKGTVSHKDSSW*QFFSLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 72 bp TGGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTaGTGGCAGTTTTTCTCTCTCTCTCTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: WEKGTVSHKDSS*WQFFSLSLSLS
Trigger: AGAGAGAGAGAGAGAGAGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCTCAGGGCCACAGGTTaGGCTGCACCTGGTGTTGTA +
Preference number: 3 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCLRATG*AAPGVV
Trigger: TACAACACCAGGTGCAGCCAAACCTGTGGCCCTGAG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR TCA 72 bp GAACGAATGCACAGATTTCCAGAACACTGTAAGCCCTaGGGCAGTGCCCTCTCTTTTCCCTCCTTGTTATCT +
Preference number: 3 (lower is better)
Translates to: ERMHRFPEHCKP*GSALSFPSLLS
Trigger: AGATAACAAGGAGGGAAAAGAGAGGGCACTGCCTCAGGGCTTACAGTGTTCTGGAAATCTGTGCATTCGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR CCA 72 bp ATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTaGGAGAAAGGCACTGTCTCACACAAGGACAGCAGT +
Preference number: 3 (lower is better)
Translates to: ISPLSVHIKDSA*EKGTVSHKDSS
Trigger: ACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTATCTACTCCAGTACTaGTGGCTGGGTCGGCCCGTG +
Preference number: 3 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSYLLQY*WLGRPV
Trigger: CACGGGCCGACCCAGCCACAAGTACTGGAGTAGATA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR CAA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATATCTACTCCAGTACTaGTGGCTGGGTCGGCCCGTG +
Preference number: 3 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIYLLQY*WLGRPV
Trigger: CACGGGCCGACCCAGCCACAAGTACTGGAGTAGATA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR CAA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTCATCCACAAATTTGCTaGAAGAATATCCTACACCTA +
Preference number: 3 (lower is better)
Translates to: QVRSAVHHESRVLLATSCHPQIC*KNILHL
Trigger: TAGGTGTAGGATATTCTTCAAGCAAATTTGTGGATG...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAACACAAGGACAGCAGTaGGTGGCAGTTTTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: YDSDITTVSAHKRFGLGETQGQQ*VAVFLS
Trigger: AGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACCAAGCATTTTCATCGTaGTCACACTATTGTAAACCA +
Preference number: 3 (lower is better)
Translates to: SDITTVSAHKRFGLGERHQAFSS*SHYCKP
Trigger: TGGTTTACAATAGTGTGACAACGATGAAAATGCTTG...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR TCA 72 bp GTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTaGGGCATGCCTTCCTCCGGTCAATTACCAATTCTT +
Preference number: 3 (lower is better)
Translates to: VMGSSHSEHSIY*GMPSSGQLPIL
Trigger: AAGAATTGGTAATTGACCGGAGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAAGAGCATTCCATTTATaGAGGCATGCCTTCCTCCGG +
Preference number: 3 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKRAFHL*RHAFLR
Trigger: CCGGAGGAAGGCATGCCTCAATAAATGGAATGCTCT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR CCA 72 bp AGGCCATCAACCACTAGTAGAAACATATCATCTATCTaGATCAAGTCATTGGCTGTTCTGTTTACGCAACAC +
Preference number: 3 (lower is better)
Translates to: RPSTTSRNISSI*IKSLAVLFTQH
Trigger: GTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGATATGTTTCTACTAGTGGTTGATGGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCAAAACAAACTATAGCTaGAGAGCCAGTAATTGCAAC +
Preference number: 3 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCKTNYS*RASNCN
Trigger: GTTGCAATTACTGGCTCTCAAGCTATAGTTTGTTTT...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCAAGCATTTTCATCGTaGTCACACTATTGTAAACCA +
Preference number: 3 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCQAFSS*SHYCKP
Trigger: TGGTTTACAATAGTGTGACAACGATGAAAATGCTTG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR GCA 72 bp AAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTaGAGTTGTAGTTTTTGCTTTGACTGTAGGTGCTAT +
Preference number: 3 (lower is better)
Translates to: KSLAVLFTQHQF*SCSFCFDCRCY
Trigger: ATAGCACCTACAGTCAAAGCAAAAACTACAACTGCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR GCA 72 bp AGCACCGCAAAGTACTTCATCTACCATCCACAAATTTaGTTGAAGAATATCCTACACCTAGGTTTTATATCG +
Preference number: 3 (lower is better)
Translates to: STAKYFIYHPQI*LKNILHLGFIS
Trigger: CGATATAAAACCTAGGTGTAGGATATTCTTCAAGCAAATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
3UTR CCA 72 bp CTAGTAGAAACATATCATCTATCTGGATCAAGTCATTaGCTGTTCTGTTTACGCAACACCAGTTTTGCAGTT +
Preference number: 3 (lower is better)
Translates to: LVETYHLSGSSH*LFCLRNTSFAV
Trigger: AACTGCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGATATGTTTCTACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CCA 72 bp TCAACAGCATTAATTATAAAACACTCTGTGGTAAGATaGAACACTATTGCAGCTGAGATAGAGAAGTTTGGT +
Preference number: 3 (lower is better)
Translates to: STALIIKHSVVR*NTIAAEIEKFG
Trigger: ACCAAACTTCTCTATCTCAGCTGCAATAGTGTTCCATCTTACCACAGAGTGTTTTATAATTAATGCTGTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTGCAGGCGGCGGCGGCTaGTGGTGGTGCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCAGGGG*WWCWVC
Trigger: GCAGACCCAGCACCACCAGCAGCCGCCGCCGCCTGC...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTCGACGAGGCGGCGGCTaGGGCAGCAGCGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCRRGGG*GSSGCN
Trigger: GTTGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCG...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTGGCCGCCCCAGGGGTTaGACGGTGCGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCGRPRG*TVRSRL
Trigger: CAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCC...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTGGTGCGTGTTCCAGCTaGACGAGGCCGACGAGGCGG +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCGACSS*TRPTRR
Trigger: CCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACC...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTCCGCGCGAGGGAACTTaGGCGGCGCGATCACGTTGC +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCPREGT*AARSRC
Trigger: GCAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGG...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTGCGCCAGGCCGATCTaGGGGGAGAAAGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCCARPI*GEKVPP
Trigger: CGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTCTGAGGAGAGGGGCGTaGACGGGGCTTCGGATACGC +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCLRRGA*TGLRIR
Trigger: GCGTATCCGAAGCCCCGTCCACGCCCCTCTCCTCAG...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCTGCCCGTGGACCAGGTaGTGCCGAAGGACGGCGACA +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLCPWTR*CRRTAT
Trigger: TGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCA...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTCGACGAGGCGGCGGCTaGGGCAGCAGCGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPRRGGG*GSSGCN
Trigger: GTTGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCG...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTGGCGGCGGCTGCTGGTaGTGCTGGGTCTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPGGGCW*CWVCAR
Trigger: CCTGGCGCAGACCCAGCACCACCAGCAGCCGCCGCC...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTGGGCTGCGCCTGTGGTaGCTGCGCTGGCTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPGLRLW*LRWLCR
Trigger: CCGGCACAGCCAGCGCAGCCACCACAGGCGCAGCCC...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACCTGGTCATGATGGGCTaGTGGCCGTACGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHLVMMG*WPYAAA
Trigger: CGCCGCGGCGTACGGCCACCAGCCCATCATGACCAG...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCGGGAGGCAGCATGAGTaGGACCCTGCAGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLGRQHE*DPAGEV
Trigger: GACCTCACCTGCAGGGTCTCACTCATGCTGCCTCCC...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGGGCTGCGCCTGTGGTaGCTGCGCTGGCTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQGLRLW*LRWLCR
Trigger: CCGGCACAGCCAGCGCAGCCACCACAGGCGCAGCCC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACGGCTTGGGGGTCTCTaGGGAGAGGGGCGTGGACGG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQRLGGL*GEGRGR
Trigger: CCGTCCACGCCCCTCTCCTCAGAGACCCCCAAGCCG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTGCCCAGCTTCCAGGTaGGGAGGGTGTTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCCPASR*GGCWKS
Trigger: GCTTTTCCAACACCCTCCTCACCTGGAAGCTGGGCA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACGCTGAGGGCCGGCACTaGGCTGTTTTCCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHAEGRH*AVFLRL
Trigger: AAGCCGGAGGAAAACAGCGCAGTGCCGGCCCTCAGC...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGCAGGCGGCGGCGGCTaGTGGTGGTGCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCAGGGG*WWCWVC
Trigger: GCAGACCCAGCACCACCAGCAGCCGCCGCCGCCTGC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGGGCTGCGCCTGTGGTaGCTGCGCTGGCTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCGLRLW*LRWLCR
Trigger: CCGGCACAGCCAGCGCAGCCACCACAGGCGCAGCCC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGTCATGATGGGCTGGTaGCCGTACGCCGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQVMMGW*PYAAAA
Trigger: CGCCGCCGCGGCGTACGGCCACCAGCCCATCATGAC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAGGTGCGTGTTCCAGCTaGACGAGGCCGACGAGGCGG +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEGACSS*TRPTRR
Trigger: CCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACC...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGGCCGCCCCAGGGGTTaGACGGTGCGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCGRPRG*TVRSRL
Trigger: CAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTCCGCGCGAGGGAACTTaGGCGGCGCGATCACGTTGC +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPPREGT*AARSRC
Trigger: GCAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGG...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACTCCAGTACTTGTGGCTaGGTCGGCCCGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHSSTCG*VGPWLS
Trigger: GCTGAGCCACGGGCCGACCCAGCCACAAGTACTGGA...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTCTCCGAAGACTGGGTTaGCATGGTGCGGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCLRRLG*HGAGSS
Trigger: AGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAG...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTTCCAGGACTTGGAAGTaGGAGGGGCCGCGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPSRTWK*EGPREG
Trigger: TCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGA...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTCAGCGGAACGGGACGTaGCGAGGGCGGTCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSQRNGT*RGRSPP
Trigger: GGGAGGCGACCGCCCTCGTCACGTCCCGTTCCGCTG...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGCGGCGCATCCTGCTaGTTCCTGGAAAGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGESGASC*FLESGP
Trigger: CGGGCCGCTTTCCAGGAAGCAGCAGGATGCGCCGCT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR GCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCGTTTGCGCAGCTTGTTaGTACCGACAGTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLVCAAC*YRQWSG
Trigger: GCCGCTCCACTGTCGGTAGCAACAAGCTGCGCAAAC...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTGACTCAGGTTGGGGCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPDSGWG*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGCCCCAACCTGAGTC...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACCGTGGACCAGGTGCTaGCGAAGGACGGCGACAGCG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQPWTRC*RRTATA
Trigger: CGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATGGTGGTGCTGGGTCTaGGCCAGGCCGATCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQWWCWV*ARPICG
Trigger: CCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGCAGGCGGCGGCGGCTaGTGGTGGTGCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSAGGGG*WWCWVC
Trigger: GCAGACCCAGCACCACCAGCAGCCGCCGCCGCCTGC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTGGTGACATCCGAGTGTaGTTCCTCAGTGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCGDIRV*FLSATN
Trigger: GTTGGTGGCACTGAGGAAGCACACTCGGATGTCACC...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTCAGGCGCGGAGGCGTTaGTCCGGGCGGGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSQARRR*SGRAVQ
Trigger: CTGCACAGCCCGCCCGGACCAACGCCTCCGCGCCTG...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTCGTTGGTGGTGCCCGTaGACCAGGTGCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPRWWCP*TRCCRR
Trigger: CCTTCGGCAGCACCTGGTCCACGGGCACCACCAACG...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTAGTGCCTCCGAAGACTaGGTTGACATGGTGCGGGAA +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCSASED*VDMVRE
Trigger: TTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACT...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGGCTGCTGGTGGTGCTaGGTCTGCGCCAGGCCGATC +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQGCWWC*VCARPI
Trigger: GATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGTCATGATGGGCTGGTaGCCGTACGCCGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCVMMGW*PYAAAA
Trigger: CGCCGCCGCGGCGTACGGCCACCAGCCCATCATGAC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGGCCGCCCCAGGGGTTaGACGGTGCGCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSGRPRG*TVRSRL
Trigger: CAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGGCTGGGTCGGCCCGTaGCTCAGCTCCAGCGGAACG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCGWVGP*LSSSGT
Trigger: CGTTCCGCTGGAGCTGAGCCACGGGCCGACCCAGCC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATCCAGGACTTGGAAGTaGGAGGGGCCGCGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQSRTWK*EGPREG
Trigger: TCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACAGCGGAACGGGACGTaGCGAGGGCGGTCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIQRNGT*RGRSPP
Trigger: GGGAGGCGACCGCCCTCGTCACGTCCCGTTCCGCTG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGACTCAGGTTGGGGCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQDSGWG*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGCCCCAACCTGAGTC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTGCTGAGGGCCGGCACTaGGCTGTTTTCCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPAEGRH*AVFLRL
Trigger: AAGCCGGAGGAAAACAGCGCAGTGCCGGCCCTCAGC...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCCGTGGACCAGGTGCTaGCGAAGGACGGCGACAGCG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCPWTRC*RRTATA
Trigger: CGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACTACCGCGTTGGTGGTaGCCGTGGACCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQLPRWW*PWTRCC
Trigger: GCAGCACCTGGTCCACGGGCACCACCAACGCGGTAG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACGTTGGTGGTGCCCGTaGACCAGGTGCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQRWWCP*TRCCRR
Trigger: CCTTCGGCAGCACCTGGTCCACGGGCACCACCAACG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAATGTCCTCTACCGCGTTaGTGGTGCCCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGECPLPR*WCPWTR
Trigger: CCTGGTCCACGGGCACCACCAACGCGGTAGAGGACA...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGGCTGCTGGTGGTGCTaGGTCTGCGCCAGGCCGATC +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCGCWWC*VCARPI
Trigger: GATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAGGCGGCGGCTGCTGGTaGTGCTGGGTCTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIGGGCW*CWVCAR
Trigger: CCTGGCGCAGACCCAGCACCACCAGCAGCCGCCGCC...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCTGGTCATGATGGGCTaGTGGCCGTACGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCLVMMG*WPYAAA
Trigger: CGCCGCGGCGTACGGCCACCAGCCCATCATGACCAG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAATTCACCAGCGGTTTGTaGAACTCCCGCCCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEFTSGL*NSRPAR
Trigger: CCGAGCCGGGCGGGAGTTCCACAAACCGCTGGTGAA...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACGGCTTGGGGGTCTCTaGGGAGAGGGGCGTGGACGG +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIRLGGL*GEGRGR
Trigger: CCGTCCACGCCCCTCTCCTCAGAGACCCCCAAGCCG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAACGGCTTGCTGGTCATaGTGGGCTGGTGGCCGTACG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQTACWS*WAGGRT
Trigger: CGTACGGCCACCAGCCCATCATGACCAGCAAGCCGT...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTCCAGGACTTGGAAGTaGGAGGGGCCGCGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCSRTWK*EGPREG
Trigger: TCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCAGCGGAACGGGACGTaGCGAGGGCGGTCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVQRNGT*RGRSPP
Trigger: GGGAGGCGACCGCCCTCGTCACGTCCCGTTCCGCTG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAACTCAGTGCCACCAACTaGGCCTTACAGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGELSATN*ALQGGS
Trigger: GCTGCCTCCCTGTAAGGCTCAGTTGGTGGCACTGAG...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATGGAGCGGCGCATCCTaGTGCTTCCTGGAAAGCGGC +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQWSGAS*CFLESG
Trigger: GCCGCTTTCCAGGAAGCAGCAGGATGCGCCGCTCCA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACAGCGGTGATTCCATCTaGATCTTGTCCGGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHSGDSI*ILSGPL
Trigger: CAACGGCCCGGACAAGATGCAGATGGAATCACCGCT...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTGCCCGTGGACCAGGTaGTGCCGAAGGACGGCGACA +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCCPWTR*CRRTAT
Trigger: TGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCTACCGCGTTGGTGGTaGCCGTGGACCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCLPRWW*PWTRCC
Trigger: GCAGCACCTGGTCCACGGGCACCACCAACGCGGTAG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCTACCGCGTTGGTGGTaGCCGTGGACCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCLPRWW*PWTRCC
Trigger: GCAGCACCTGGTCCACGGGCACCACCAACGCGGTAG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCTGCGCCAGGCCGATCTaGGGGGAGAAAGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCCARPI*GEKVPP
Trigger: CGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCA...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTGGTGGTGCTGGGTCTaGGCCAGGCCGATCTGCGGG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSWWCWV*ARPICG
Trigger: CCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACGACGAGGCGGCGGCTaGGGCAGCAGCGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKRRGGG*GSSGCN
Trigger: GTTGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCCTCTACCGCGTTGGTaGTGCCCGTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCPLPRW*CPWTRC
Trigger: GCACCTGGTCCACGGGCACCACCAACGCGGTAGAGG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATGTCCTCTACCGCGTTaGTGGTGCCCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQCPLPR*WCPWTR
Trigger: CCTGGTCCACGGGCACCACCAACGCGGTAGAGGACA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACCATGGTCCCGTTGACTaGGGTGATCCCCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHHGPVD*GDPLEE
Trigger: TTCTTCCAGGGGATCACCCCAGTCAACGGGACCATG...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGGCTGCTGGTGGTGCTaGGTCTGCGCCAGGCCGATC +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSGCWWC*VCARPI
Trigger: GATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGGCGGCGGCTGCTGGTaGTGCTGGGTCTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKGGGCW*CWVCAR
Trigger: CCTGGCGCAGACCCAGCACCACCAGCAGCCGCCGCC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCATCAGCGAAACTCATTaGTGGGCCACTGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLISETH*WATGRV
Trigger: TACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGAT...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR TCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCCCAGATGACAAGGCTTaGTCACCATGGCTATCATCC +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLPDDKA*SPWLSS
Trigger: GGATGATAGCCATGGTGATCAAGCCTTGTCATCTGG...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTCGTACAAACGGTCCATaGTCATTGCCAGTTCAACAG +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCRTNGP*SLPVQQ
Trigger: CTGTTGAACTGGCAATGATCATGGACCGTTTGTACG...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTCAATGTCATTGTGCTaGAGCTGCACAAAACGAGCG +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCSMSLC*SCTKRA
Trigger: CGCTCGTTTTGTGCAGCTTCAGCACAATGACATTGA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACGAACACTGTAAGCCCTaGGGCAGTGCCCTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHEHCKP*GSALSF
Trigger: AAAAGAGAGGGCACTGCCTCAGGGCTTACAGTGTTC...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCTCATCCTGCATGGTTTaGGCAGCTTGTTGCTACCGA +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLSSCMV*AACCYR
Trigger: TCGGTAGCAACAAGCTGCGCAAACCATGCAGGATGA...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTGCCCGTGGACCAGGTaGTGCCGAAGGACGGCGACA +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSCPWTR*CRRTAT
Trigger: TGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACACTGGGTTGACATGGTaGGGGAAGTTCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHTGLTW*GKFWKS
Trigger: GCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGT...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATGGTGGTGCTGGGTCTaGGCCAGGCCGATCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIWWCWV*ARPICG
Trigger: CCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACGGTGCGCTCCAGGCTaGATTCACGCTTTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQRCAPG*IHALVR
Trigger: ACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAACCTGCAGGTGAGGTCTaGAGTACACCACGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEPAGEV*STPRKP
Trigger: CGGCTTTCGTGGTGTACTGCAGACCTCACCTGCAGG...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGGCTGGGTCGGCCCGTaGCTCAGCTCCAGCGGAACG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKGWVGP*LSSSGT
Trigger: CGTTCCGCTGGAGCTGAGCCACGGGCCGACCCAGCC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTCCAGTACTTGTGGCTaGGTCGGCCCGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCSSTCG*VGPWLS
Trigger: GCTGAGCCACGGGCCGACCCAGCCACAAGTACTGGA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTAGGTTTGGCTGCACCTaGTGTTGTATAAATCCACCG +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCRFGCT*CCINPP
Trigger: CGGTGGATTTATACAACACCAGGTGCAGCCAAACCT...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCGGCTTGGGGGTCTCTaGGGAGAGGGGCGTGGACGG +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNRLGGL*GEGRGR
Trigger: CCGTCCACGCCCCTCTCCTCAGAGACCCCCAAGCCG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGCCTGGCAGGAGCGGTaGTTCCATCTGCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQAWQER*FHLHLV
Trigger: GACAAGATGCAGATGGAATCACCGCTCCTGCCAGGC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTACGGCTTGCTGGTCATaGTGGGCTGGTGGCCGTACG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSTACWS*WAGGRT
Trigger: CGTACGGCCACCAGCCCATCATGACCAGCAAGCCGT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTGACATTGACCAGATATaGAAGTCCCTCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCDIDQI*KSLPET
Trigger: TGTTTCTGGGAGGGACTTTCATATCTGGTCAATGTC...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAACGCAGTTGCCACAATaGAAGGCAAGGGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGETQLPQ*KARGTR
Trigger: TCTGGTGCCCCTTGCCTTTCATTGTGGCAACTGCGT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTGGACACAAGTTTCTCTaGGTTATTGATGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCGHKFL*VIDEPR
Trigger: GCGAGGTTCATCAATAACTCAGAGAAACTTGTGTCC...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACCGTGGACCAGGTGCTaGCGAAGGACGGCGACAGCG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKPWTRC*RRTATA
Trigger: CGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCGGTGCGCTCCAGGCTaGATTCACGCTTTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCRCAPG*IHALVR
Trigger: ACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTCGGCTCGGGAATGTATaGTCGCCCAGCAGTATTCAC +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPRLGNV*SPSSIH
Trigger: GTGAATACTGCTGGGCGAGCATACATTCCCGAGCCG...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTTGGTGCGGGAAGTTCTaGAAGAGCATGGTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPWCGKF*KSMVPL
Trigger: CAACGGGACCATGCTCTTCCAGAACTTCCCGCACCA...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACTGGTCATGATGGGCTaGTGGCCGTACGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKLVMMG*WPYAAA
Trigger: CGCCGCGGCGTACGGCCACCAGCCCATCATGACCAG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGGTGCGTGTTCCAGCTaGACGAGGCCGACGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKGACSS*TRPTRR
Trigger: CCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACCGCGCGAGGGAACTTaGGCGGCGCGATCACGTTGC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKPREGT*AARSRC
Trigger: GCAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTAGCGAAACTCATTGGTaGGCCACTGGGAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPSETHW*ATGRVV
Trigger: CACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACTGGTCGAATTTGCACTaGCTTGTCCTTGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHWSNLH*LVLDGG
Trigger: CCCACCATCAAGGACAAGCCAGTGCAAATTCGACCA...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGGCTGGGTCGGCCCGTaGCTCAGCTCCAGCGGAACG +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNGWVGP*LSSSGT
Trigger: CGTTCCGCTGGAGCTGAGCCACGGGCCGACCCAGCC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCTACTCCAGTACTTGTaGCTGGGTCGGCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCLLQYL*LGRPVA
Trigger: AGCCACGGGCCGACCCAGCCACAAGTACTGGAGTAG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTATAAAAGATTCGGCCTaGGAGAAAGGCACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCIKDSA*EKGTVS
Trigger: TGAGACAGTGCCTTTCTCCCAGGCCGAATCTTTTAT...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACTCCGAAGACTGGGTTaGCATGGTGCGGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQLRRLG*HGAGSS
Trigger: AGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTTTCTGGACAAGGTCTaGAGCTATGTAAAATGGTGC +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCFLDKV*SYVKWC
Trigger: GCACCATTTTACATAGCTTCAGACCTTGTCCAGAAA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGACTCAGGTTGGGGCTaGTGCTGCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKDSGWG*CCCRCC
Trigger: GCAGCAGCGGCAGCAGCAGCAGCCCCAACCTGAGTC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAGCTGAGGGCCGGCACTaGGCTGTTTTCCTCCGGCTT +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIAEGRH*AVFLRL
Trigger: AAGCCGGAGGAAAACAGCGCAGTGCCGGCCCTCAGC...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTGCGCCAGGCCGATCTaGGGGGAGAAAGTGCCTCCG +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVCARPI*GEKVPP
Trigger: CGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACCAGGGGTTGGACGGTaGGCTCCAGGCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIPGVGR*APGCIH
Trigger: GTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACGGCTCGGGAATGTATaGTCGCCCAGCAGTATTCAC +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQRLGNV*SPSSIH
Trigger: GTGAATACTGCTGGGCGAGCATACATTCCCGAGCCG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCCCATTTATTGAGGCATaGCTTCCTCCGGTCAATTAC +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLPFIEA*LPPVNY
Trigger: GTAATTGACCGGAGGAAGGCATGCCTCAATAAATGG...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTATCAGTAAATCATCCTaGATGGTTTGCGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCISKSS*MVCAAL
Trigger: CAAAGCTGCGCAAACCATGCAGGATGATTTACTGAT...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412050.8
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTGTTTTCCTCCGGCTTaGGGGTCTCTGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCCFPPA*GSLRRG
Trigger: CCCTCTCCTCAGAGACCCCCAAGCCGGAGGAAAACA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACCTCTACCGCGTTGGTaGTGCCCGTGGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKPLPRW*CPWTRC
Trigger: GCACCTGGTCCACGGGCACCACCAACGCGGTAGAGG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATGTCCTCTACCGCGTTaGTGGTGCCCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNICPLPR*WCPWTR
Trigger: CCTGGTCCACGGGCACCACCAACGCGGTAGAGGACA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTCTACTCCAGTACTTGTaGCTGGGTCGGCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSLLQYL*LGRPVA
Trigger: AGCCACGGGCCGACCCAGCCACAAGTACTGGAGTAG...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAATCAGGGCCACAGGTTTaGCTGCACCTGGTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGESGPQV*LHLVLY
Trigger: ATACAACACCAGGTGCAGCCAAACCTGTGGCCCTGA...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCCACTCTGTGGTAAGATaGAACACTATTGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLHSVVR*NTIAAE
Trigger: CTCAGCTGCAATAGTGTTCCATCTTACCACAGAGTG...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCTCCGAAGACTGGGTTaGCATGGTGCGGGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCLRRLG*HGAGSS
Trigger: AGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTTATCTGTTCCTGGATaGTGGAAATTTATCCCCATG +
Preference number: 4 (lower is better)
Translates to: QVRSAVHHESRVLLATSCLSVPG*WKFIPM
Trigger: CATGGGGATAAATTTCCATCATCCAGGAACAGATAA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAGCACAAAACGAGCGCTaGTGGCTGCAATGTAACTCT +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEAQNER*WLQCNS
Trigger: AGAGTTACATTGCAGCCATCAGCGCTCGTTTTGTGC...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCTCACAGACAGTAGCCTaGCGGCCGCTGATGAGAATG +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCSQTVA*RPLMRM
Trigger: CATTCTCATCAGCGGCCGTCAGGCTACTGTCTGTGA...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAGAGCATTCCATTTATTaGGGCATGCCTTCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEEHSIY*GMPSSG
Trigger: ACCGGAGGAAGGCATGCCTCAATAAATGGAATGCTC...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGGGAGGCAGCATGAGTaGGACCCTGCAGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVGRQHE*DPAGEV
Trigger: GACCTCACCTGCAGGGTCTCACTCATGCTGCCTCCC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACTCAGTGCCACCAACTaGGCCTTACAGGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNILSATN*ALQGGS
Trigger: GCTGCCTCCCTGTAAGGCTCAGTTGGTGGCACTGAG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGTCCACAGACAGTGGTaGCATCCGAGTGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCVHRQW*HPSVLP
Trigger: AGGAAGCACACTCGGATGTCACCACTGTCTGTGGAC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTAGCGGTGATTCCATCTaGATCTTGTCCGGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCSGDSI*ILSGPL
Trigger: CAACGGCCCGGACAAGATGCAGATGGAATCACCGCT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGCATTCACGCTTTGGTaGGTGTTCCAGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCAFTLW*VFQLDE
Trigger: CTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACCAGGGGTTGGACGGTaGGCTCCAGGCTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKPGVGR*APGCIH
Trigger: GTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACGTAAATCATCCTGCATaGTTTGCGCAGCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHVNHPA*FAQLVA
Trigger: AGCAACAAGCTGCGCAAACCATGCAGGATGATTTAC...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTGTTTTCCTCCGGCTTaGGGGTCTCTGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSCFPPA*GSLRRG
Trigger: CCCTCTCCTCAGAGACCCCCAAGCCGGAGGAAAACA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAAGACTGGGTTGACATaGTGCGGGAAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEKTGLT*CGKFWK
Trigger: CTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTAGTGCCTCCGAAGACTaGGTTGACATGGTGCGGGAA +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCSASED*VDMVRE
Trigger: TTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGCTGCATTCACGCTTTaGTGCGTGTTCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCAAFTL*CVFQLD
Trigger: GTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATTCACCAGCGGTTTGTaGAACTCCCGCCCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKFTSGL*NSRPAR
Trigger: CCGAGCCGGGCGGGAGTTCCACAAACCGCTGGTGAA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTTCACCAGCGGTTTGTaGAACTCCCGCCCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVFTSGL*NSRPAR
Trigger: CCGAGCCGGGCGGGAGTTCCACAAACCGCTGGTGAA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACTGCGAAAGCTGGCAGTaGTCTCATCTTCATCAATAT +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHCESWQ*SHLHQY
Trigger: ATATTGATGAAGATGAGATCACTGCCAGCTTTCGCA...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTTCAATGTCATTGTGCTaGAGCTGCACAAAACGAGCG +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPSMSLC*SCTKRA
Trigger: CGCTCGTTTTGTGCAGCTTCAGCACAATGACATTGA...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTCACAGACAGTAGCCTaGCGGCCGCTGATGAGAATG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSQTVA*RPLMRM
Trigger: CATTCTCATCAGCGGCCGTCAGGCTACTGTCTGTGA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAATCTGCAGCCCAAGGGTaGATGCTAGAAAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGESAAQG*MLEKCP
Trigger: TGGACATTTTTCTAGCATTCACCCTTGGGCTGCAGA...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGTGAGACCCTGCAGGTaGGGTCTGCAGTACACCACG +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVVRPCR*GLQYTT
Trigger: CGTGGTGTACTGCAGACCTCACCTGCAGGGTCTCAC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATGCCCAGCTTCCAGGTaGGGAGGGTGTTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNICPASR*GGCWKS
Trigger: GCTTTTCCAACACCCTCCTCACCTGGAAGCTGGGCA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTACTGGGTTGACATGGTaGGGGAAGTTCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCTGLTW*GKFWKS
Trigger: GCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACGGTGCGCTCCAGGCTaGATTCACGCTTTGGTGCGT +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKRCAPG*IHALVR
Trigger: ACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAACGGTCCATGATCATTaGCAGTTCAACAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGETVHDH*QFNSSK
Trigger: CTTCGAGCTGTTGAACTGGCAATGATCATGGACCGT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAACGAGCGCTGATGGCTaGAATGTAACTCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGETSADG*NVTLLI
Trigger: AATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCTACACTCTGCAATTCTaGATTATACTGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLYTLQF*IILDTE
Trigger: CTCAGTGTCCAGTATAATGCAGAATTGCAGAGTGTA...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATCATCCTGCATGGTTTaGGCAGCTTTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQSSCMV*AALSVQ
Trigger: CTGGACACTCAAAGCTGCGCAAACCATGCAGGATGA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATGTTGCTACCGACAGTaGAGCGGCGCATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKCCYRQ*SGASCC
Trigger: GCAGCAGGATGCGCCGCTCCACTGTCGGTAGCAACA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTGGTGCGGGAAGTTCTaGAAGAGCATGGTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSWCGKF*KSMVPL
Trigger: CAACGGGACCATGCTCTTCCAGAACTTCCCGCACCA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAGTGCCTCCGAAGACTaGGTTGACATGGTGCGGGAA +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSASED*VDMVRE
Trigger: TTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGCTGCATTCACGCTTTaGTGCGTGTTCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSAAFTL*CVFQLD
Trigger: GTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATTCCAGTACTTGTGGCTaGGTCGGCCCGTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNSSTCG*VGPWLS
Trigger: GCTGAGCCACGGGCCGACCCAGCCACAAGTACTGGA...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACTACTCCAGTACTTGTaGCTGGGTCGGCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKLLQYL*LGRPVA
Trigger: AGCCACGGGCCGACCCAGCCACAAGTACTGGAGTAG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGCCTGGCAGGAGCGGTaGTTCCATCTGCATCTTGTC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKAWQER*FHLHLV
Trigger: GACAAGATGCAGATGGAATCACCGCTCCTGCCAGGC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCCAGATGACAAGGCTTaGTCACCATGGCTATCATCC +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCPDDKA*SPWLSS
Trigger: GGATGATAGCCATGGTGATCAAGCCTTGTCATCTGG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTACTCGTTCCCCATTTTaGCAGCGAGTGGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCTRSPF*QRVGEL
Trigger: AAGTTCTCCCACTCGCTGTCAAAATGGGGAACGAGT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATTGCTTTCAGCTTTGTaGGGCCAGTCTACTACGAGA +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQLLSAL*GQSTTR
Trigger: TCTCGTAGTAGACTGGCCTCACAAAGCTGAAAGCAA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGCACTGGCTTGTCCTTaGTGGTGGGGCTTGACACAC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVALACP*WWGLTH
Trigger: GTGTGTCAAGCCCCACCATCAAGGACAAGCCAGTGC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGCACTGGCTTGTCCTTaGTGGTGGGGCTTGACACAC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKALACP*WWGLTH
Trigger: GTGTGTCAAGCCCCACCATCAAGGACAAGCCAGTGC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGCACAAAACGAGCGCTaGTGGCTGCAATGTAACTCT +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCAQNER*WLQCNS
Trigger: AGAGTTACATTGCAGCCATCAGCGCTCGTTTTGTGC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCCGAGCTAATGATTGCTaGATTGTTGTGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLRANDC*IVVKFL
Trigger: CAAAAACTTCACAACAATTCAGCAATCATTAGCTCG...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACGTTTGTAAGCTAAGATaGGCTCTTTGGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHVCKLR*ALWFSG
Trigger: TCCAGAAAACCAAAGAGCTCATCTTAGCTTACAAAC...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTGACATTGACCAGATATaGAAGTCCCTCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPDIDQI*KSLPET
Trigger: TGTTTCTGGGAGGGACTTTCATATCTGGTCAATGTC...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGTGAGACCCTGCAGGTaGGGTCTGCAGTACACCACG +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNVRPCR*GLQYTT
Trigger: CGTGGTGTACTGCAGACCTCACCTGCAGGGTCTCAC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAACGCAGTTGCCACAATaGAAGGCAAGGGGCACCAGA +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNITQLPQ*KARGTR
Trigger: TCTGGTGCCCCTTGCCTTTCATTGTGGCAACTGCGT...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAGCATTCACGCTTTGGTaGGTGTTCCAGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIAFTLW*VFQLDE
Trigger: CTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGC...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCAGGTGTGAATCAAAGTaGAAATCAGTACCATTCTAC +
Preference number: 4 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLRCESK*KSVPFY
Trigger: GTAGAATGGTACTGATTTGCACTTTGATTCACACCT...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTCCATTTATTGAGGCATaGCTTCCTCCGGTCAATTAC +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPPFIEA*LPPVNY
Trigger: GTAATTGACCGGAGGAAGGCATGCCTCAATAAATGG...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCCTGCAGGTGAGGTCTaGAGTACACCACGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVPAGEV*STPRKP
Trigger: CGGCTTTCGTGGTGTACTGCAGACCTCACCTGCAGG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGATCATGCACGCAGTTaGCACAATGAAAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCDHARS*HNERQG
Trigger: CCCTTGCCTTTCATTGTGGCAACTGCGTGCATGATC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTGTTTTCCTCCGGCTTaGGGGTCTCTGAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVCFPPA*GSLRRG
Trigger: CCCTCTCCTCAGAGACCCCCAAGCCGGAGGAAAACA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTAAGACTGGGTTGACATaGTGCGGGAAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCKTGLT*CGKFWK
Trigger: CTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAAGCGAAACTCATTGGTaGGCCACTGGGAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNISETHW*ATGRVV
Trigger: CACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCT...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTATCAGCGAAACTCATTaGTGGGCCACTGGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSISETH*WATGRV
Trigger: TACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGAT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAGCTCGAAGGGGTCGTaGAACTCCCCCAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSSKGS*NSPNKD
Trigger: ATCTTTGTTGGGGGAGTTCCACGACCCCTTCGAGCT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACCTTCTTGACCCATTTTaGGGTATAAAGTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHLLDPF*GIKSTA
Trigger: TGCTGTTGACTTTATACCCCAAAATGGGTCAAGAAG...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTACTCGTTCCCCATTTTaGCAGCGAGTGGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSTRSPF*QRVGEL
Trigger: AAGTTCTCCCACTCGCTGTCAAAATGGGGAACGAGT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCGTACAAACGGTCCATaGTCATTGCCAGTTCAACAG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCRTNGP*SLPVQQ
Trigger: CTGTTGAACTGGCAATGATCATGGACCGTTTGTACG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTCAATGTCATTGTGCTaGAGCTGCACAAAACGAGCG +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCSMSLC*SCTKRA
Trigger: CGCTCGTTTTGTGCAGCTTCAGCACAATGACATTGA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACATTGCTGAATTGTTGTaGAGTTTTTGCTACATCTGC +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHIAELL*SFCYIC
Trigger: GCAGATGTAGCAAAAACTTCACAACAATTCAGCAAT...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGACATTGACCAGATATaGAAGTCCCTCCCAGAAACA +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQDIDQI*KSLPET
Trigger: TGTTTCTGGGAGGGACTTTCATATCTGGTCAATGTC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGTCCACAGACAGTGGTaGCATCCGAGTGTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKVHRQW*HPSVLP
Trigger: AGGAAGCACACTCGGATGTCACCACTGTCTGTGGAC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAACATGTAGCCACTTCTTaGCCCATTTTGGGGTATAAA +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEHVATS*PILGYK
Trigger: TTTATACCCCAAAATGGGTCAAGAAGTGGCTACATG...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAGAGGAAAATAAGACTTaGTTTCAGCTTTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEEENKT*FQLCEA
Trigger: GGCCTCACAAAGCTGAAAGCAAGTCTTATTTTCCTC...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACTTATATATTACTATCTaGAGCCCAAGGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHLYITI*SPRVNA
Trigger: AGCATTCACCCTTGGGCTGCAGATAGTAATATATAA...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGCTTCCCAGTCAAGTTaGAGGTCAGAACACCTCTGT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSASQSS*RSEHLC
Trigger: ACAGAGGTGTTCTGACCTGCAACTTGACTGGGAAGC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGGCCACAGGTTTGGCTaGACCTGGTGTTGTATAAAT +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCGHRFG*TWCCIN
Trigger: ATTTATACAACACCAGGTGCAGCCAAACCTGTGGCC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAGTGTGCTTCCTCAGTaGCACCAACTGAGCCTTACA +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSVLPQ*HQLSLT
Trigger: TGTAAGGCTCAGTTGGTGGCACTGAGGAAGCACACT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTCATCCTGCATGGTTTaGGCAGCTTTGAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSSCMV*AALSVQ
Trigger: CTGGACACTCAAAGCTGCGCAAACCATGCAGGATGA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCATCCTGCTGCTTCCTaGAAAGCGGCCCGAAAGACA +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVHPAAS*KAARKT
Trigger: TGTCTTTCGGGCCGCTTTCCAGGAAGCAGCAGGATG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACATGGTCCCGTTGACTaGGGTGATCCCCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKHGPVD*GDPLEE
Trigger: TTCTTCCAGGGGATCACCCCAGTCAACGGGACCATG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGCTGCATTCACGCTTTaGTGCGTGTTCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVAAFTL*CVFQLD
Trigger: GTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTCATTGGTGGGCCACTaGGAGGGTAGTGTTTACCTT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSLVGH*EGSVYL
Trigger: AAGGTAAACACTACCCTCCCAGTGGCCCACCAATGA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAACTCTTTCACAATCCTaGTCAGTCGCGCACAATCAA +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQTLSQS*SVAHNQ
Trigger: TTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTTCTGGATCAAGTCATTaGCTGTTCTGTTTACGCAAC +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPSGSSH*LFCLRN
Trigger: GTTGCGTAAACAGAACAGCCAATGACTTGATCCAGA...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CAA 72 bp TGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATaGAGGCATGCCTTCCTCCGGTCAATTACCAATTCT +
Preference number: 4 (lower is better)
Translates to: CYGLFPFRAFHL*RHAFLRSITNS
Trigger: AGAATTGGTAATTGACCGGAGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTATGCGTCCTGCAAAATaGTTCCTCCACATTATATCA +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPMRPAK*FLHIIS
Trigger: TGATATAATGTGGAGGAATCATTTTGCAGGACGCAT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAACTCGTTCCCCATTTTaGCAGCGAGTGGGAGAACTT +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNITRSPF*QRVGEL
Trigger: AAGTTCTCCCACTCGCTGTCAAAATGGGGAACGAGT...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATATCCTTACTCTAAGTaGCCCGAGCTAATGATTGCT +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQYPYSK*PELMIA
Trigger: AGCAATCATTAGCTCGGGTCACTTAGAGTAAGGATA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCGGACACAAGTTTCTCTaGGTTATTGATGAACCTCGC +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCGHKFL*VIDEPR
Trigger: GCGAGGTTCATCAATAACTCAGAGAAACTTGTGTCC...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAGAACACTATTGCAGCTaGGATAGAGAAGTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEEHYCS*DREVWL
Trigger: TAACCAAACTTCTCTATCTCAGCTGCAATAGTGTTC...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGCATTCACGCTTTGGTaGGTGTTCCAGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNAFTLW*VFQLDE
Trigger: CTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTATCCCCATGCGTCCTaGAAAATGATTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCYPHAS*KMIPPH
Trigger: ATGTGGAGGAATCATTTTGCAGGACGCATGGGGATA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGAGGAAAATAAGACTTaGTTTCAGCTTTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQEENKT*FQLCEA
Trigger: GGCCTCACAAAGCTGAAAGCAAGTCTTATTTTCCTC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTACGAGCGCTGATGGCTaGAATGTAACTCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSTSADG*NVTLLI
Trigger: AATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTAGTTTTTGCTACATCTaGCACCTACTCACGAGTATT +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPSFCYI*HLLTSI
Trigger: AATACTCGTGAGTAGGTGGCAGATGTAGCAAAAACT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACTTCACTTTAGCTTTATaGTGTACAATCTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SDITTVSAHKRFGLGERHFTLAL*CTIFQL
Trigger: AAGCTGGAAGATTGTACAGCATAAAGCTAAAGTGAA...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGGTGACATCCGAGTGTaGTTCCTCAGTGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNGDIRV*FLSATN
Trigger: GTTGGTGGCACTGAGGAAGCACACTCGGATGTCACC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGGGTGTGGAGGAAGATaGAACCCGACACATAGTCAG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKGCGGR*NPTHSQ
Trigger: CTGACTATGTGTCGGGTTGCATCTTCCTCCACACCC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAATGCAGTACATTCTaGATTAGCCCATGCCTCACT +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQKCSTF*ISPCLT
Trigger: AGTGAGGCATGGGCTAATGCAGAATGTACTGCATTT...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCATGGTCCCGTTGACTaGGGTGATCCCCTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNHGPVD*GDPLEE
Trigger: TTCTTCCAGGGGATCACCCCAGTCAACGGGACCATG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATTGGTGCGGGAAGTTCTaGAAGAGCATGGTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNWCGKF*KSMVPL
Trigger: CAACGGGACCATGCTCTTCCAGAACTTCCCGCACCA...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATCATTGGTGGGCCACTaGGAGGGTAGTGTTTACCTT +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNISLVGH*EGSVYL
Trigger: AAGGTAAACACTACCCTCCCAGTGGCCCACCAATGA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATGGTCGAATTTGCACTaGCTTGTCCTTGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIWSNLH*LVLDGG
Trigger: CCCACCATCAAGGACAAGCCAGTGCAAATTCGACCA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTAGCTCGAAGGGGTCGTaGAACTCCCCCAACAAAGAT +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVSSKGS*NSPNKD
Trigger: ATCTTTGTTGGGGGAGTTCCACGACCCCTTCGAGCT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTATCATCCAGCACATATaGCTTTACTTCAACCCGTTT +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPIIQHI*LYFNPF
Trigger: AAACGGGTTGAAGTAAAGCCATATGTGCTGGATGAT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCACTCTTTCACAATCCTaGTCAGTCGCGCACAATCAA +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCTLSQS*SVAHNQ
Trigger: TTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAGGTTTGGCTGCACCTaGTGTTGTATAAATCCACCG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSRFGCT*CCINPP
Trigger: CGGTGGATTTATACAACACCAGGTGCAGCCAAACCT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTCAGGGCCACAGGTTTaGCTGCACCTGGTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVSGPQV*LHLVLY
Trigger: ATACAACACCAGGTGCAGCCAAACCTGTGGCCCTGA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTCTTCTTGACCCATTTTaGGGTATAAAGTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPLLDPF*GIKSTA
Trigger: TGCTGTTGACTTTATACCCCAAAATGGGTCAAGAAG...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCCTTTCAGAGGTTCATaGTCAGTCCTTATCATATCC +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCPFRGS*SVLIIS
Trigger: GGATATGATAAGGACTGATCATGAACCTCTGAAAGG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATTGCTTTCAGCTTTGTaGGGCCAGTCTACTACGAGA +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNILLSAL*GQSTTR
Trigger: TCTCGTAGTAGACTGGCCTCACAAAGCTGAAAGCAA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACGTACAAACGGTCCATaGTCATTGCCAGTTCAACAG +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIRTNGP*SLPVQQ
Trigger: CTGTTGAACTGGCAATGATCATGGACCGTTTGTACG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGCACAAAACGAGCGCTaGTGGCTGCAATGTAACTCT +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVAQNER*WLQCNS
Trigger: AGAGTTACATTGCAGCCATCAGCGCTCGTTTTGTGC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTCGAGCTAATGATTGCTaGATTGTTGTGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPRANDC*IVVKFL
Trigger: CAAAAACTTCACAACAATTCAGCAATCATTAGCTCG...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATCTGCAGCCCAAGGGTaGATGCTAGAAAAATGTCCA +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNISAAQG*MLEKCP
Trigger: TGGACATTTTTCTAGCATTCACCCTTGGGCTGCAGA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTAAACAAACTATAGCTTaGGAGCCAGTAATTGCAACT +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPKQTIA*EPVIAT
Trigger: AGTTGCAATTACTGGCTCTCAAGCTATAGTTTGTTT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGAACACTATTGCAGCTaGGATAGAGAAGTTTGGTTA +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQEHYCS*DREVWL
Trigger: TAACCAAACTTCTCTATCTCAGCTGCAATAGTGTTC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCATGTAGCCACTTCTTaGCCCATTTTGGGGTATAAA +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCHVATS*PILGYK
Trigger: TTTATACCCCAAAATGGGTCAAGAAGTGGCTACATG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATACTGGGTTGACATGGTaGGGGAAGTTCTGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNTGLTW*GKFWKS
Trigger: GCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGGAAATTTATCCCCATaGGTCCTGCAAAATGATTCC +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCGNLSP*VLQNDS
Trigger: GGAATCATTTTGCAGGACGCATGGGGATAAATTTCC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAACGAGCGCTGATGGCTaGAATGTAACTCTGCTGATT +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNITSADG*NVTLLI
Trigger: AATCAGCAGAGTTACATTGCAGCCATCAGCGCTCGT...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTAAAATCGAGAACGAATaGACAGATTTCCAGAACACT +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPKIENE*TDFQNT
Trigger: AGTGTTCTGGAAATCTGTGCATTCGTTCTCGATTTT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATACACTCTGCAATTCTaGATTATACTGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQYTLQF*IILDTE
Trigger: CTCAGTGTCCAGTATAATGCAGAATTGCAGAGTGTA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTCCATTTATTGAGGCATaGCTTCCTCCGGTCAATTAC +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSPFIEA*LPPVNY
Trigger: GTAATTGACCGGAGGAAGGCATGCCTCAATAAATGG...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTAGTGTGCTTCCTCAGTaGCACCAACTGAGCCTTACA +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVSVLPQ*HQLSLT
Trigger: TGTAAGGCTCAGTTGGTGGCACTGAGGAAGCACACT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGATCATGCACGCAGTTaGCACAATGAAAGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKDHARS*HNERQG
Trigger: CCCTTGCCTTTCATTGTGGCAACTGCGTGCATGATC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAACGCAACACCAGTTTTaGAGTTGTAGTTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGETQHQF*SCSFCF
Trigger: AAAGCAAAAACTACAACTGCAAAACTGGTGTTGCGT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCACTCCGGTCCTGAAATaGCAACAGATTGTTACCATT +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCTPVLK*QQIVTI
Trigger: AATGGTAACAATCTGTTGCCATTTCAGGACCGGAGT...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATGGTCGAATTTGCACTaGCTTGTCCTTGATGGTGGG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKWSNLH*LVLDGG
Trigger: CCCACCATCAAGGACAAGCCAGTGCAAATTCGACCA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACAGTGGTACTTCGGTTaGGTGACTTCATTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKQWYFG*VTSFSG
Trigger: CCCTGAGAATGAAGTCACCCAACCGAAGTACCACTG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACACAAGGACAGCAGTTaGTGGCAGTTTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIHKDSS*WQFFSL
Trigger: GAGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCTTATCTGTTCCTGGATaGTGGAAATTTATCCCCATG +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCLSVPG*WKFIPM
Trigger: CATGGGGATAAATTTCCATCATCCAGGAACAGATAA...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCCAGATGACAAGGCTTaGTCACCATGGCTATCATCC +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNPDDKA*SPWLSS
Trigger: GGATGATAGCCATGGTGATCAAGCCTTGTCATCTGG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATTGCTTTCAGCTTTGTaGGGCCAGTCTACTACGAGA +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKLLSAL*GQSTTR
Trigger: TCTCGTAGTAGACTGGCCTCACAAAGCTGAAAGCAA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGAGCATTCCATTTATTaGGGCATGCCTTCCTCCGGT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNEHSIY*GMPSSG
Trigger: ACCGGAGGAAGGCATGCCTCAATAAATGGAATGCTC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATTCAGGTTGATTATGTaGCCGCTCTGGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKFRLIM*PLWQKH
Trigger: GTGCTTTTGCCAGAGCGGTCACATAATCAACCTGAA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614585.4
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGAGGAAAATAAGACTTaGTTTCAGCTTTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSEENKT*FQLCEA
Trigger: GGCCTCACAAAGCTGAAAGCAAGTCTTATTTTCCTC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTACGGTCCATGATCATTaGCAGTTCAACAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVTVHDH*QFNSSK
Trigger: CTTCGAGCTGTTGAACTGGCAATGATCATGGACCGT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAACGGTCCATGATCATTaGCAGTTCAACAGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKTVHDH*QFNSSK
Trigger: CTTCGAGCTGTTGAACTGGCAATGATCATGGACCGT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAGTTTCTGAAAATAAGTaGATGCTCCAGTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEVSENK*MLQFKT
Trigger: TGTTTTGAACTGGAGCATGCACTTATTTTCAGAAAC...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTAGTTTTTGCTACATCTaGCACCTACTCACGAGTATT +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCSFCYI*HLLTSI
Trigger: AATACTCGTGAGTAGGTGGCAGATGTAGCAAAAACT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTTTCACTTTAGCTTTATaGTGTACAATCTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLWALPIQSIPFIEACLPFTLAL*CTIFQL
Trigger: AAGCTGGAAGATTGTACAGCATAAAGCTAAAGTGAA...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGCTTCCCAGTCAAGTTaGAGGTCAGAACACCTCTGT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNASQSS*RSEHLC
Trigger: ACAGAGGTGTTCTGACCTGCAACTTGACTGGGAAGC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAACATCCCTAGAGAACTaGACTGTGACATCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKTSLEN*TVTSLV
Trigger: GACTAGGGATGTCACAGTGCAGTTCTCTAGGGATGT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTACATCCCTAGAGAACTaGACTGTGACATCCCTAGTC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVTSLEN*TVTSLV
Trigger: GACTAGGGATGTCACAGTGCAGTTCTCTAGGGATGT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAAATGCAGTACATTCTaGATTAGCCCATGCCTCACT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSKCSTF*ISPCLT
Trigger: AGTGAGGCATGGGCTAATGCAGAATGTACTGCATTT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGGAAATTTATCCCCATaGGTCCTTTCAGAGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSGNLSP*VLSEVH
Trigger: ATGAACCTCTGAAAGGACGCATGGGGATAAATTTCC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412050.8
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATAAGACTGGGTTGACATaGTGCGGGAAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNKTGLT*CGKFWK
Trigger: CTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCATCATCCAGCACATATaGCTTTACTTCAACCCGTTT +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCIIQHI*LYFNPF
Trigger: AAACGGGTTGAAGTAAAGCCATATGTGCTGGATGAT...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCACAAGGACAGCAGTTaGTGGCAGTTTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVHKDSS*WQFFSL
Trigger: GAGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACCTTTCAGAGGTTCATaGTCAGTCCTTATCATATCC +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIPFRGS*SVLIIS
Trigger: GGATATGATAAGGACTGATCATGAACCTCTGAAAGG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTTATCTGTTCCTGGATaGTGGAAATTTATCCCCATG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSLSVPG*WKFIPM
Trigger: CATGGGGATAAATTTCCATCATCCAGGAACAGATAA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTAAAAGATCCAGCTTATaGGGTATCCTTACAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCKRSSL*GILTSQ
Trigger: TTGACTTGTAAGGATACCTCATAAGCTGGATCTTTT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAATCAGTAAATCATCCTaGATGGTTTGCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIISKSS*MVCAAC
Trigger: ACAAGCTGCGCAAACCATGCAGGATGATTTACTGAT...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATATCCCCATGCGTCCTaGAAAATGATTCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKYPHAS*KMIPPH
Trigger: ATGTGGAGGAATCATTTTGCAGGACGCATGGGGATA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR GCA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGAAGGCATTGTTAAGTaGCATAATATTATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LKSILISVRQLTLSLKSQEGIVK*HNIICS
Trigger: GGAACAGATAATATTATGGCACTTAACAATGCCTTC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR GCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCAAAATCGAGAACGAATaGACAGATTTCCAGAACACT +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCKIENE*TDFQNT
Trigger: AGTGTTCTGGAAATCTGTGCATTCGTTCTCGATTTT...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAAAGGACAGCAGTTGGTaGCAGTTTTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKKDSSW*QFFSLS
Trigger: AGAGAGAGAGAAAAACTGCCACCAACTGCTGTCCTT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAATAAAAGATTCGGCCTaGGAGAAAGGCACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKIKDSA*EKGTVS
Trigger: TGAGACAGTGCCTTTCTCCCAGGCCGAATCTTTTAT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCACTCTGTGGTAAGATaGAACACTATTGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVHSVVR*NTIAAE
Trigger: CTCAGCTGCAATAGTGTTCCATCTTACCACAGAGTG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTGCGAAAGCTGGCAGTaGTCTCATCTTCATCAATAT +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVCESWQ*SHLHQY
Trigger: ATATTGATGAAGATGAGATCACTGCCAGCTTTCGCA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATTTCTGGACAAGGTCTaGAGCTATGTAAAATGGTGC +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKFLDKV*SYVKWC
Trigger: GCACCATTTTACATAGCTTCAGACCTTGTCCAGAAA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAGTTTGTAAGCTAAGATaGGCTCTTTGGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIVCKLR*ALWFSG
Trigger: TCCAGAAAACCAAAGAGCTCATCTTAGCTTACAAAC...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGGAAATTTATCCCCATaGGTCCTGCAAAATGATTCC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVGNLSP*VLQNDS
Trigger: GGAATCATTTTGCAGGACGCATGGGGATAAATTTCC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR GCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCTGAAAATAAGTGCATaGTCCAGTTCAAAACAATCA +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCLKISA*SSSKQS
Trigger: TGATTGTTTTGAACTGGAGCATGCACTTATTTTCAG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGTTTCTGAAAATAAGTaGATGCTCCAGTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: SILISVRQLTLSLKSQKCVSENK*MLQFKT
Trigger: TGTTTTGAACTGGAGCATGCACTTATTTTCAGAAAC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGACTTAAATCTATTCTaGAGTGTCATATCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSDLNLF*SVISSQ
Trigger: CTGACTGGATATGACACTGCAGAATAGATTTAAGTC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTACGCAACACCAGTTTTaGAGTTGTAGTTTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSTQHQF*SCSFCF
Trigger: AAAGCAAAAACTACAACTGCAAAACTGGTGTTGCGT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAATCAGTAAATCATCCTaGATGGTTTGCGCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKISKSS*MVCAAL
Trigger: CAAAGCTGCGCAAACCATGCAGGATGATTTACTGAT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTACTCCGGTCCTGAAATaGCAACAGATTGTTACCATT +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVTPVLK*QQIVTI
Trigger: AATGGTAACAATCTGTTGCCATTTCAGGACCGGAGT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATACTCTTTCACAATCCTaGTCAGTCGCGCACAATCAA +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNTLSQS*SVAHNQ
Trigger: TTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATAAGGACAGCAGTTGGTaGCAGTTTTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNKDSSW*QFFSLS
Trigger: AGAGAGAGAGAAAAACTGCCACCAACTGCTGTCCTT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTCTGGATCAAGTCATTaGCTGTTCTGTTTACGCAAC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVSGSSH*LFCLRN
Trigger: GTTGCGTAAACAGAACAGCCAATGACTTGATCCAGA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCAACATATCATCTATCTaGATCAAGTCATTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCNISSI*IKSLAV
Trigger: AACAGCCAATGACTTGATCCAGATAGATGATATGTT...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
3UTR CAA 72 bp ACTAGTAGAAACATATCATCTATCTGGATCAAGTCATaGGCTGTTCTGTTTACGCAACACCAGTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TSRNISSIWIKS*AVLFTQHQFCS
Trigger: ACTGCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGATATGTTTCTACTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTATGCGTCCTGCAAAATaGTTCCTCCACATTATATCA +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVMRPAK*FLHIIS
Trigger: TGATATAATGTGGAGGAATCATTTTGCAGGACGCAT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATTGCGAAAGCTGGCAGTaGTCTCATCTTCATCAATAT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNCESWQ*SHLHQY
Trigger: ATATTGATGAAGATGAGATCACTGCCAGCTTTCGCA...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGTTTGTAAGCTAAGATaGGCTCTTTGGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKVCKLR*ALWFSG
Trigger: TCCAGAAAACCAAAGAGCTCATCTTAGCTTACAAAC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAAAACAAACTATAGCTTaGGAGCCAGTAATTGCAACT +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIKQTIA*EPVIAT
Trigger: AGTTGCAATTACTGGCTCTCAAGCTATAGTTTGTTT...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATACACTCTGCAATTCTaGATTATACTGGACACTGAG +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKYTLQF*IILDTE
Trigger: CTCAGTGTCCAGTATAATGCAGAATTGCAGAGTGTA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAAGTTTTTGCTACATCTaGCACCTACTCACGAGTATT +
Preference number: 4 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKSFCYI*HLLTSI
Trigger: AATACTCGTGAGTAGGTGGCAGATGTAGCAAAAACT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATTATATATTACTATCTaGAGCCCAAGGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNILYITI*SPRVNA
Trigger: AGCATTCACCCTTGGGCTGCAGATAGTAATATATAA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATACTCCGGTCCTGAAATaGCAACAGATTGTTACCATT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNTPVLK*QQIVTI
Trigger: AATGGTAACAATCTGTTGCCATTTCAGGACCGGAGT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCGAGCTAATGATTGCTaGATTGTTGTGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVRANDC*IVVKFL
Trigger: CAAAAACTTCACAACAATTCAGCAATCATTAGCTCG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR TCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTAAAAGATCCAGCTTATaGGGTATCCTTACAAGTCAA +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVKRSSL*GILTSQ
Trigger: TTGACTTGTAAGGATACCTCATAAGCTGGATCTTTT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACTGAAAATAAGTGCATaGTCCAGTTCAAAACAATCA +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNILKISA*SSSKQS
Trigger: TGATTGTTTTGAACTGGAGCATGCACTTATTTTCAG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATACCATCCACAAATTTaGTTGAAGAATATCCTACAC +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIYHPQI*LKNILH
Trigger: GTGTAGGATATTCTTCAAGCAAATTTGTGGATGGTA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTGCAGTTGTAGTTTTTaGTTTGACTGTAGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVCSCSF*FDCRCY
Trigger: ATAGCACCTACAGTCAAAGCAAAAACTACAACTGCA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATATCATCCAGCACATATaGCTTTACTTCAACCCGTTT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNIIQHI*LYFNPF
Trigger: AAACGGGTTGAAGTAAAGCCATATGTGCTGGATGAT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CCA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAAACATATCATCTATCTaGATCAAGTCATTGGCTGTT +
Preference number: 4 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNINISSI*IKSLAV
Trigger: AACAGCCAATGACTTGATCCAGATAGATGATATGTT...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR TCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATAAAAGATCCAGCTTATaGGGTATCCTTACAAGTCAA +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNKRSSL*GILTSQ
Trigger: TTGACTTGTAAGGATACCTCATAAGCTGGATCTTTT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATAGGTGTGAATCAAAGTaGAAATCAGTACCATTCTAC +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNRCESK*KSVPFY
Trigger: GTAGAATGGTACTGATTTGCACTTTGATTCACACCT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGTTTCTGAAAATAAGTaGATGCTCCAGTTCAAAACA +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVVSENK*MLQFKT
Trigger: TGTTTTGAACTGGAGCATGCACTTATTTTCAGAAAC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTACCATCCACAAATTTaGTTGAAGAATATCCTACAC +
Preference number: 4 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVYHPQI*LKNILH
Trigger: GTGTAGGATATTCTTCAAGCAAATTTGTGGATGGTA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATTTATATATTACTATCTaGAGCCCAAGGGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNLYITI*SPRVNA
Trigger: AGCATTCACCCTTGGGCTGCAGATAGTAATATATAA...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGACTTAAATCTATTCTaGAGTGTCATATCCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNDLNLF*SVISSQ
Trigger: CTGACTGGATATGACACTGCAGAATAGATTTAAGTC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATTGCAGTTGTAGTTTTTaGTTTGACTGTAGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNCSCSF*FDCRCY
Trigger: ATAGCACCTACAGTCAAAGCAAAAACTACAACTGCA...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGAAGGCATTGTTAAGTaGCATAATATTATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNEGIVK*HNIICS
Trigger: GGAACAGATAATATTATGGCACTTAACAATGCCTTC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATTTCACTTTAGCTTTATaGTGTACAATCTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNFTLAL*CTIFQL
Trigger: AAGCTGGAAGATTGTACAGCATAAAGCTAAAGTGAA...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR GCA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATAGATCGACTGTTAAGTaGCATAATATTATCTGTTCC +
Preference number: 4 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNRSTVK*HNIICS
Trigger: GGAACAGATAATATTATGGCACTTAACAGTCGATCT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412050.8
CDS TCA 90 bp GGCGGCGCTCCTCTGCGCGTAGGGCGCCTGGCTGGGGCTGGCGGGTaGGCGGCGCTGCTGCGGGGGCTGCGCCTGTGGTGGCTGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GGAPLRVGRLAGAGG*AALLRGLRLWWLRW
Trigger: CCAGCGCAGCCACCACAGGCGCAGCCCCCGCAGCAGCGCCGCTCACCCGCCAGCCCCAGCCAGGCGCCCTACGCGCAGAGGAGCGCCGCC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 90 bp ACACCCACGCCCACACCGACCGCCCGGCGAGGGTCCCGGCCCGCCTaGAGGCCGCCCCAGGGGTTGGACGGTGCGCTCCAGGCTGCATTC +
Preference number: 5 (lower is better)
Translates to: TPTPTPTARRGSRPA*RPPQGLDGALQAAF
Trigger: GAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTGCAGGCGGGCCGGGACCCTCGCCGGGCGGTCGGTGTGGGCGTGGGTGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp GGCTGTGCCGGCTGCGGCGCGGGCGCAGGCGGCGGCGGCTGCTGGTaGTGCTGGGTCTGCGCCAGGCCGATCTGCGGGGAGAAAGTGCCT +
Preference number: 5 (lower is better)
Translates to: GCAGCGAGAGGGGCW*CWVCARPICGEKVP
Trigger: AGGCACTTTCTCCCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCCGCCGCCGCCTGCGCCCGCGCCGCAGCCGGCACAGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp GCTGGCTGTGCCGGCTGCGGCGCGGGCGCAGGCGGCGGCGGCTGCTaGTGGTGCTGGGTCTGCGCCAGGCCGATCTGCGGGGAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: AGCAGCGAGAGGGGC*WCWVCARPICGEKV
Trigger: CACTTTCTCCCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCCGCCGCCGCCTGCGCCCGCGCCGCAGCCGGCACAGCCAGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 90 bp TGCGGCGCGGGCGCAGGCGGCGGCGGCTGCTGGTGGTGCTGGGTCTaGGCCAGGCCGATCTGCGGGGAGAAAGTGCCTCCGAAGACTGGG +
Preference number: 5 (lower is better)
Translates to: CGAGAGGGGCWWCWV*ARPICGEKVPPKTG
Trigger: CCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCCGCCGCCGCCTGCGCCCGCGCCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp CCGCCCGGCGAGGGTCCCGGCCCGCCTGCAGGCCGCCCCAGGGGTTaGACGGTGCGCTCCAGGCTGCATTCACGCTTTGGTGCGTGTTCC +
Preference number: 5 (lower is better)
Translates to: PPGEGPGPPAGRPRG*TVRSRLHSRFGACS
Trigger: GGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTGCAGGCGGGCCGGGACCCTCGCCGGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS TCA 90 bp CAGCAGCGGCTGCAACCGCCGAAGACGAGGACGGCTTGCTGGTCATaGTGGGCTGGTGGCCGTACGCCGCGGCGGCGCTCCTCTGCGCGT +
Preference number: 5 (lower is better)
Translates to: QQRLQPPKTRTACWS*WAGGRTPRRRSSAR
Trigger: ACGCGCAGAGGAGCGCCGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGCAAGCCGTCCTCGTCTTCGGCGGTTGCAGCCGCTGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 90 bp GGAAGAAGCTGTCCTCTACCGCGTTGGTGGTGCCCGTGGACCAGGTaGTGCCGAAGGACGGCGACAGCGACGCGCCCGGTGCCGCGGGCT +
Preference number: 5 (lower is better)
Translates to: GRSCPLPRWWCPWTR*CRRTATATRPVPRA
Trigger: AGCCCGCGGCACCGGGCGCGTCGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCGGTAGAGGACAGCTTCTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 90 bp GCGAGGGTCCCGGCCCGCCTGCAGGCCGCCCCAGGGGTTGGACGGTaGGCTCCAGGCTGCATTCACGCTTTGGTGCGTGTTCCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: ARVPARLQAAPGVGR*APGCIHALVRVPAG
Trigger: TCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTGCAGGCGGGCCGGGACCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp CCGCCCCAGGGGTTGGACGGTGCGCTCCAGGCTGCATTCACGCTTTaGTGCGTGTTCCAGCTGGACGAGGCCGACGAGGCGGCGGCTGCG +
Preference number: 5 (lower is better)
Translates to: PPQGLDGALQAAFTL*CVFQLDEADEAAAA
Trigger: CGCAGCCGCCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 90 bp GCTTTGGTGCGTGTTCCAGCTGGACGAGGCCGACGAGGCGGCGGCTaGGGCAGCAGCGGCTGCAACCGCCGAAGACGAGGACGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: ALVRVPAGRGRRGGG*GSSGCNRRRRGRLA
Trigger: AGCAAGCCGTCCTCGTCTTCGGCGGTTGCAGCCGCTGCTGCCGCAGCCGCCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 90 bp CCCCAGGGGTTGGACGGTGCGCTCCAGGCTGCATTCACGCTTTGGTaGGTGTTCCAGCTGGACGAGGCCGACGAGGCGGCGGCTGCGGCA +
Preference number: 5 (lower is better)
Translates to: PQGLDGALQAAFTLW*VFQLDEADEAAAAA
Trigger: TGCCGCAGCCGCCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 90 bp GCCCGCCTGCAGGCCGCCCCAGGGGTTGGACGGTGCGCTCCAGGCTaGATTCACGCTTTGGTGCGTGTTCCAGCTGGACGAGGCCGACGA +
Preference number: 5 (lower is better)
Translates to: ARLQAAPGVGRCAPG*IHALVRVPAGRGRR
Trigger: TCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTGCAGGCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp TCCCTCCTTGTTATCTACTCCAGTACTTGTGGCTGGGTCGGCCCGTaGCTCAGCTCCAGCGGAACGGGACGTGACGAGGGCGGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: SLLVIYSSTCGWVGP*LSSSGTGRDEGGRL
Trigger: GAGGCGACCGCCCTCGTCACGTCCCGTTCCGCTGGAGCTGAGCCACGGGCCGACCCAGCCACAAGTACTGGAGTAGATAACAAGGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS TCA 90 bp CATTATCGGTCCGGAAAGCGTTATCCTCCATCCAGGACTTGGAAGTaGGAGGGGCCGCGCGAGGGAACTTGGGCGGCGCGATCACGTTGC +
Preference number: 5 (lower is better)
Translates to: HYRSGKRYPPSRTWK*EGPREGTWAARSRC
Trigger: GCAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGATGGAGGATAACGCTTTCCGGACCGATAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp GGGAAGTTCTGGAAGAGCATGGTCCCGTTGACTGGGGTGATCCCCTaGAAGAAGCTGTCCTCTACCGCGTTGGTGGTGCCCGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: GKFWKSMVPLTGVIP*KKLSSTALVVPVDQ
Trigger: CTGGTCCACGGGCACCACCAACGCGGTAGAGGACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp GGTCTGCGCCAGGCCGATCTGCGGGGAGAAAGTGCCTCCGAAGACTaGGTTGACATGGTGCGGGAAGTTCTGGAAGAGCATGGTCCCGTT +
Preference number: 5 (lower is better)
Translates to: GLRQADLRGESASED*VDMVREVLEEHGPV
Trigger: AACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp AGGCCGATCTGCGGGGAGAAAGTGCCTCCGAAGACTGGGTTGACATaGTGCGGGAAGTTCTGGAAGAGCATGGTCCCGTTGACTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RPICGEKVPPKTGLT*CGKFWKSMVPLTGV
Trigger: CACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACAGGCCGCCCCAGGGGTaGGACGGTGCGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SDITTVSAHKRFGLGERHRPPQG*DGALQA
Trigger: AGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCT...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACGCCGCGCGAGGGAACTaGGGCGGCGCGATCACGTTG +
Preference number: 5 (lower is better)
Translates to: SDITTVSAHKRFGLGERHAARGN*GGAITL
Trigger: CAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGC...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS CCA 90 bp GTTGACATGGTGCGGGAAGTTCTGGAAGAGCATGGTCCCGTTGACTaGGGTGATCCCCTGGAAGAAGCTGTCCTCTACCGCGTTGGTGGT +
Preference number: 5 (lower is better)
Translates to: VDMVREVLEEHGPVD*GDPLEEAVLYRVGG
Trigger: ACCACCAACGCGGTAGAGGACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp GAGAAAGTGCCTCCGAAGACTGGGTTGACATGGTGCGGGAAGTTCTaGAAGAGCATGGTCCCGTTGACTGGGGTGATCCCCTGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: EKVPPKTGLTWCGKF*KSMVPLTGVIPWKK
Trigger: CTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGCAGGCGCGGAGGCGTaGGTCCGGGCGGGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCAGAEA*VRAGCA
Trigger: TGCACAGCCCGCCCGGACCAACGCCTCCGCGCCTGC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAGCCGCGCGAGGGAACTaGGGCGGCGCGATCACGTTG +
Preference number: 5 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEAARGN*GGAITL
Trigger: CAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGC...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCACGCGGCCAGCACCTTaGGGGTACTTCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLTRPAP*GYFSSG
Trigger: CCCAGAGCTGAAGTACCCCAAAGGTGCTGGCCGCGT...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCAAGAGCATGGTCCCGTaGACTGGGGTGATCCCCTGG +
Preference number: 5 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLKSMVP*TGVIPW
Trigger: CCAGGGGATCACCCCAGTCAACGGGACCATGCTCTT...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCGAAGACGAGGACGGCTaGCTGGTCATGATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLEDEDG*LVMMGW
Trigger: CCAGCCCATCATGACCAGCAAGCCGTCCTCGTCTTC...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTGGCTGCATTCACGCTTaGGTGCGTGTTCCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: QVRSAVHHESRVLLATSCGCIHA*VRVPAG
Trigger: TCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCC...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTAGGCCGCCCCAGGGGTaGGACGGTGCGCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCRPPQG*DGALQA
Trigger: AGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCT...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTCTGGAGAAGGGCTTTTaGAGCGGCGAGATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: QVRSAVHHESRVLLATSCLEKGF*SGEMGL
Trigger: CAACCCCATCTCGCCGCTCAAAAAGCCCTTCTCCAG...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAATACGCTGGACTCAGGTaGGGGCTGCTGCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEYAGLR*GLLLLP
Trigger: CGGCAGCAGCAGCAGCCCCAACCTGAGTCCAGCGTA...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTTACGCTGGACTCAGGTaGGGGCTGCTGCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: LLWALPIQSIPFIEACLPYAGLR*GLLLLP
Trigger: CGGCAGCAGCAGCAGCCCCAACCTGAGTCCAGCGTA...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACCTGTTTTCCTCCGGCTaGGGGGTCTCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SDITTVSAHKRFGLGERHLFSSG*GVSEER
Trigger: CCTCTCCTCAGAGACCCCCAAGCCGGAGGAAAACAG...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCTATCTACTCCAGTACTaGTGGCTGGGTCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLYLLQY*WLGRPV
Trigger: CACGGGCCGACCCAGCCACAAGTACTGGAGTAGATA...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGATTCCATCTGCATCTaGTCCGGGCCGTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQDSICI*SGPLGA
Trigger: GGCCCCCAACGGCCCGGACAAGATGCAGATGGAATC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCTGTCCTCTACCGCGTaGGTGGTGCCCGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCLSSTA*VVPVDQ
Trigger: CTGGTCCACGGGCACCACCAACGCGGTAGAGGACAG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAGCCGCGCGAGGGAACTaGGGCGGCGCGATCACGTTG +
Preference number: 5 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIAARGN*GGAITL
Trigger: CAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGC...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTTGGCTGCACCTGGTGTaGTATAAATCCACCGTGACA +
Preference number: 5 (lower is better)
Translates to: QVRSAVHHESRVLLATSCWLHLV*YKSTVT
Trigger: TGTCACGGTGGATTTATACAACACCAGGTGCAGCCA...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACTGTTTTCCTCCGGCTaGGGGGTCTCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQLFSSG*GVSEER
Trigger: CCTCTCCTCAGAGACCCCCAAGCCGGAGGAAAACAG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTCTGTCCTCTACCGCGTaGGTGGTGCCCGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSLSSTA*VVPVDQ
Trigger: CTGGTCCACGGGCACCACCAACGCGGTAGAGGACAG...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTTATCTACTCCAGTACTaGTGGCTGGGTCGGCCCGTG +
Preference number: 5 (lower is better)
Translates to: LLWALPIQSIPFIEACLPYLLQY*WLGRPV
Trigger: CACGGGCCGACCCAGCCACAAGTACTGGAGTAGATA...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CAGGTGAGGTCTGCAGTACACCACGAAAGCCGTGTCCTCTTAGCAACTTCCTGTACACAAGGACAGCAGTaGGTGGCAGTTTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QVRSAVHHESRVLLATSCTQGQQ*VAVFLS
Trigger: AGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGT...ACAGGAAGTTGCTAAGAGGACACGGCTTTCGTGGTGTACTGCAGACCTCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGGTTTGCGCAGCTTGTaGCTACCGACAGTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCGLRSL*LPTVER
Trigger: CCGCTCCACTGTCGGTAGCAACAAGCTGCGCAAACC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAACATGGTTTGCGCAGCTaGTTGCTACCGACAGTGGAG +
Preference number: 5 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEHGLRS*LLPTVE
Trigger: CTCCACTGTCGGTAGCAACAAGCTGCGCAAACCATG...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CAA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGATTCCATCTGCATCTaGTCCGGGCCGTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSDSICI*SGPLGA
Trigger: GGCCCCCAACGGCCCGGACAAGATGCAGATGGAATC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGAAGACGAGGACGGCTaGCTGGTCATGATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCEDEDG*LVMMGW
Trigger: CCAGCCCATCATGACCAGCAAGCCGTCCTCGTCTTC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGGCGGCGCGATCACGTaGCTGGAGAAGGGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCGGAIT*LEKGFL
Trigger: CAAAAAGCCCTTCTCCAGCAACGTGATCGCGCCGCC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAATGCACTGGCTTGTCCTaGATGGTGGGGCTTGACACA +
Preference number: 5 (lower is better)
Translates to: YDSDITTVSAHKRFGLGECTGLS*MVGLDT
Trigger: TGTGTCAAGCCCCACCATCAAGGACAAGCCAGTGCA...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTCCTTCACCAGCGGTTaGTGGAACTCCCGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSFTSG*WNSRPA
Trigger: AGCCGGGCGGGAGTTCCACAAACCGCTGGTGAAGGA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCTGTCCTCTACCGCGTaGGTGGTGCCCGTGGACCAG +
Preference number: 5 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVLSSTA*VVPVDQ
Trigger: CTGGTCCACGGGCACCACCAACGCGGTAGAGGACAG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTCCTCCGAAGACTGGGTaGACATGGTGCGGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCPPKTG*TWCGKF
Trigger: GAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGG...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCTGCAGACAGGTGACGTaGGCACAGAAGAACGGGGCA +
Preference number: 5 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCCRQVT*AQKNGA
Trigger: TGCCCCGTTCTTCTGTGCCAACGTCACCTGTCTGCA...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTGCAGACAGGTGACGTaGGCACAGAAGAACGGGGCA +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCCRQVT*AQKNGA
Trigger: TGCCCCGTTCTTCTGTGCCAACGTCACCTGTCTGCA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 90 bp GCGTCCTGCAAAATGATTCCTCCACATTATATCAGCGAAACTCATTaGTGGGCCACTGGGAGGGTAGTGTTTACCTTTCAGAGGTTCATG +
Preference number: 5 (lower is better)
Translates to: ASCKMIPPHYISETH*WATGRVVFTFQRFM
Trigger: CATGAACCTCTGAAAGGTAAACACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATATAATGTGGAGGAATCATTTTGCAGGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CAA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATTACGCTGGACTCAGGTaGGGGCTGCTGCTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNYAGLR*GLLLLP
Trigger: CGGCAGCAGCAGCAGCCCCAACCTGAGTCCAGCGTA...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACTGTTTTCCTCCGGCTaGGGGGTCTCTGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNILFSSG*GVSEER
Trigger: CCTCTCCTCAGAGACCCCCAAGCCGGAGGAAAACAG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGATTCCATCTGCATCTaGTCCGGGCCGTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVDSICI*SGPLGA
Trigger: GGCCCCCAACGGCCCGGACAAGATGCAGATGGAATC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTTATCAGCGAAACTCATaGGTGGGCCACTGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCYQRNS*VGHWEG
Trigger: ACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATA...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAATACTCGTTCCCCATTTaGACAGCGAGTGGGAGAACT +
Preference number: 5 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEYSFPI*TASGRT
Trigger: AGTTCTCCCACTCGCTGTCAAAATGGGGAACGAGTA...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACGAATTTGCACTGGCTaGTCCTTGATGGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQRICTG*SLMVGL
Trigger: AAGCCCCACCATCAAGGACAAGCCAGTGCAAATTCG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTACGCGGCCAGCACCTTaGGGGTACTTCAGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVTRPAP*GYFSSG
Trigger: CCCAGAGCTGAAGTACCCCAAAGGTGCTGGCCGCGT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTCCTTCACCAGCGGTTaGTGGAACTCCCGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVSFTSG*WNSRPA
Trigger: AGCCGGGCGGGAGTTCCACAAACCGCTGGTGAAGGA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCATGGTTTGCGCAGCTTaGAGTGTCCAGTTTTTAAGA +
Preference number: 5 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLMVCAA*SVQFLR
Trigger: TCTTAAAAACTGGACACTCAAAGCTGCGCAAACCAT...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412050.8
CDS-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAATCATCCTGCATGGTTaGCGCAGCTTTGAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: YDSDITTVSAHKRFGLGEIILHG*RSFECP
Trigger: TGGACACTCAAAGCTGCGCAAACCATGCAGGATGAT...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412050.8
CDS-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCATCATCCTGCATGGTTaGCGCAGCTTGTTGCTACCG +
Preference number: 5 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCIILHG*RSLLLP
Trigger: CGGTAGCAACAAGCTGCGCAAACCATGCAGGATGAT...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGGCTGGGGCTGGGTTTaGCTTTTGTCCATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQGWGWV*LLSISK
Trigger: TTTACTGATGGACAAAAGCAAAACCCAGCCCCAGCC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAAAGAGCATGGTCCCGTaGACTGGGGTGATCCCCTGG +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKKSMVP*TGVIPW
Trigger: CCAGGGGATCACCCCAGTCAACGGGACCATGCTCTT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTGAAGACGAGGACGGCTaGCTGGTCATGATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVEDEDG*LVMMGW
Trigger: CCAGCCCATCATGACCAGCAAGCCGTCCTCGTCTTC...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATAGGCTGCATTCACGCTTaGGTGCGTGTTCCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIGCIHA*VRVPAG
Trigger: TCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCC...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACTGGAGAAGGGCTTTTaGAGCGGCGAGATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNILEKGF*SGEMGL
Trigger: CAACCCCATCTCGCCGCTCAAAAAGCCCTTCTCCAG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGGCGGCGCGATCACGTaGCTGGAGAAGGGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKGGAIT*LEKGFL
Trigger: CAAAAAGCCCTTCTCCAGCAACGTGATCGCGCCGCC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAGAGCATTCCATTTATaGAGGCATGCCTTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQRAFHL*RHAFLR
Trigger: CCGGAGGAAGGCATGCCTCAATAAATGGAATGCTCT...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATGGCTGCACCTGGTGTaGTATAAATCCACCGTGACA +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQWLHLV*YKSTVT
Trigger: TGTCACGGTGGATTTATACAACACCAGGTGCAGCCA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCCCAGTGGTACTTCGGTaGGGTGACTTCATTCTCAGG +
Preference number: 5 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCPVVLR*GDFILR
Trigger: CCTGAGAATGAAGTCACCCAACCGAAGTACCACTGG...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS CCA 90 bp TCCTGCAAAATGATTCCTCCACATTATATCAGCGAAACTCATTGGTaGGCCACTGGGAGGGTAGTGTTTACCTTTCAGAGGTTCATGATC +
Preference number: 5 (lower is better)
Translates to: SCKMIPPHYISETHW*ATGRVVFTFQRFMI
Trigger: GATCATGAACCTCTGAAAGGTAAACACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATATAATGTGGAGGAATCATTTTGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CAA 90 bp TCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAAAGTGTGGCTGGGGCTGGGTTTaGCTTTTGTCCATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: SILISVRQLTLSLKSQKCGWGWV*LLSISK
Trigger: TTTACTGATGGACAAAAGCAAAACCCAGCCCCAGCC...ACACTTTTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTCCTCCGAAGACTGGGTaGACATGGTGCGGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVPPKTG*TWCGKF
Trigger: GAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGG...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACCTCCGAAGACTGGGTaGACATGGTGCGGGAAGTTC +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKPPKTG*TWCGKF
Trigger: GAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAGGCTGCATTCACGCTTaGGTGCGTGTTCCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKGCIHA*VRVPAG
Trigger: TCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCC...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATATGCACTGGCTTGTCCTaGATGGTGGGGCTTGACACA +
Preference number: 5 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNICTGLS*MVGLDT
Trigger: TGTGTCAAGCCCCACCATCAAGGACAAGCCAGTGCA...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAATGCAGACAGGTGACGTaGGCACAGAAGAACGGGGCA +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKCRQVT*AQKNGA
Trigger: TGCCCCGTTCTTCTGTGCCAACGTCACCTGTCTGCA...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCAGAGCATTCCATTTATaGAGGCATGCCTTCCTCCGG +
Preference number: 5 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCRAFHL*RHAFLR
Trigger: CCGGAGGAAGGCATGCCTCAATAAATGGAATGCTCT...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp GGGAGAAAGGCACTGTCTCACACAAGGACAGCAGTTGGTGGCAGTTTTTCTCTCAAAACAAACTATAGCTaGAGAGCCAGTAATTGCAAC +
Preference number: 5 (lower is better)
Translates to: GRKALSHTRTAVGGSFSLKTNYS*RASNCN
Trigger: GTTGCAATTACTGGCTCTCAAGCTATAGTTTGTTTT...GAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGTGAGACAGTGCCTTTCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACTCAGGGCCACAGGTTaGGCTGCACCTGGTGTTGTA +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKLRATG*AAPGVV
Trigger: TACAACACCAGGTGCAGCCAAACCTGTGGCCCTGAG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp TCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAAAGGCACTCTTTCACTCAAACCTaGCAAGTAGAGATGTCACAA +
Preference number: 5 (lower is better)
Translates to: SDITTVSAHKRFGLGERHSFTQT*QVEMSQ
Trigger: TTGTGACATCTCTACTTGCAAGGTTTGAGTGAAAGA...GTGCCTTTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS CCA 90 bp AATGATTCCTCCACATTATATCAGCGAAACTCATTGGTGGGCCACTaGGAGGGTAGTGTTTACCTTTCAGAGGTTCATGATCAGTCCTTA +
Preference number: 5 (lower is better)
Translates to: NDSSTLYQRNSLVGH*EGSVYLSEVHDQSL
Trigger: TAAGGACTGATCATGAACCTCTGAAAGGTAAACACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATATAATGTGGAGGAATCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAGGCTGGGTTTTGCTTTaGTCCATCAGTAAATCATCC +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQGWVLL*SISKSS
Trigger: GGATGATTTACTGATGGACAAAAGCAAAACCCAGCC...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCTGGAGAAGGGCTTTTaGAGCGGCGAGATGGGGTTG +
Preference number: 5 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNLEKGF*SGEMGL
Trigger: CAACCCCATCTCGCCGCTCAAAAAGCCCTTCTCCAG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTTATCAGCGAAACTCATaGGTGGGCCACTGGGAGGGT +
Preference number: 5 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVYQRNS*VGHWEG
Trigger: ACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATA...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CAA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTTACTCGTTCCCCATTTaGACAGCGAGTGGGAGAACT +
Preference number: 5 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSYSFPI*TASGRT
Trigger: AGTTCTCCCACTCGCTGTCAAAATGGGGAACGAGTA...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACGAATTTGCACTGGCTaGTCCTTGATGGTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIRICTG*SLMVGL
Trigger: AAGCCCCACCATCAAGGACAAGCCAGTGCAAATTCG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCTCAGGGCCACAGGTTaGGCTGCACCTGGTGTTGTA +
Preference number: 5 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNLRATG*AAPGVV
Trigger: TACAACACCAGGTGCAGCCAAACCTGTGGCCCTGAG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTATCTGGATCAAGTCATaGGCTGTTCTGTTTACGCAA +
Preference number: 5 (lower is better)
Translates to: LLWALPIQSIPFIEACLPIWIKS*AVLFTQ
Trigger: TTGCGTAAACAGAACAGCCAATGACTTGATCCAGAT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTAGTTTCTCTGAGTTATaGATGAACCTCGCCTCCATA +
Preference number: 5 (lower is better)
Translates to: LLWALPIQSIPFIEACLPSFSEL*MNLASI
Trigger: TATGGAGGCGAGGTTCATCAATAACTCAGAGAAACT...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACCAGTGGTACTTCGGTaGGGTGACTTCATTCTCAGG +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKPVVLR*GDFILR
Trigger: CCTGAGAATGAAGTCACCCAACCGAAGTACCACTGG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CTGTTATGGGCTCTTCCCATTCAGAGCATTCCATTTATTGAGGCATGCCTTCCTGTTGTAGTTTTTGCTTaGACTGTAGGTGCTATTGCA +
Preference number: 5 (lower is better)
Translates to: LLWALPIQSIPFIEACLPVVVFA*TVGAIA
Trigger: TGCAATAGCACCTACAGTCAAAGCAAAAACTACAAC...AGGAAGGCATGCCTCAATAAATGGAATGCTCTGAATGGGAAGAGCCCATAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAAATGGTTTGCGCAGCTTaGAGTGTCCAGTTTTTAAGA +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQMVCAA*SVQFLR
Trigger: TCTTAAAAACTGGACACTCAAAGCTGCGCAAACCAT...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp TATGACTCCGATATCACCACTGTCAGTGCACATAAAAGATTCGGCCTGGGAGAATCATCCAGGAAGGCATaGTTAAGTGCCATAATATTA +
Preference number: 5 (lower is better)
Translates to: YDSDITTVSAHKRFGLGESSRKA*LSAIIL
Trigger: TAATATTATGGCACTTAACAATGCCTTCCTGGATGA...TTCTCCCAGGCCGAATCTTTTATGTGCACTGACAGTGGTGATATCGGAGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAAATCATCCTGCATGGTTaGCGCAGCTTTGAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKIILHG*RSFECP
Trigger: TGGACACTCAAAGCTGCGCAAACCATGCAGGATGAT...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATGGCTGGGGCTGGGTTTaGCTTTTGTCCATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNGWGWV*LLSISK
Trigger: TTTACTGATGGACAAAAGCAAAACCCAGCCCCAGCC...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAATCATCCAGGAAGGCATaGTTAAGTGCCATAATATTA +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQSSRKA*LSAIIL
Trigger: TAATATTATGGCACTTAACAATGCCTTCCTGGATGA...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS-3UTR CAA 90 bp CTGAAGTCTATTCTGATCTCCGTTCGGCAGCTGACTCTATCCCTAAAATCACAACAAGCATTTTCATCGTaGTCACACTATTGTAAACCA +
Preference number: 5 (lower is better)
Translates to: LKSILISVRQLTLSLKSQQAFSS*SHYCKP
Trigger: TGGTTTACAATAGTGTGACAACGATGAAAATGCTTG...TTGTGATTTTAGGGATAGAGTCAGCTGCCGAACGGAGATCAGAATAGACTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAGTTTCTCTGAGTTATaGATGAACCTCGCCTCCATA +
Preference number: 5 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSSFSEL*MNLASI
Trigger: TATGGAGGCGAGGTTCATCAATAACTCAGAGAAACT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp TCATCTATCTGGATCAAGTCATTGGCTGTTCTGTTTACGCAACACCAGTTTTGCTCTTTCACTCAAACCTaGCAAGTAGAGATGTCACAA +
Preference number: 5 (lower is better)
Translates to: SSIWIKSLAVLFTQHQFCSFTQT*QVEMSQ
Trigger: TTGTGACATCTCTACTTGCAAGGTTTGAGTGAAAGA...GCAAAACTGGTGTTGCGTAAACAGAACAGCCAATGACTTGATCCAGATAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATACACAAGGACAGCAGTaGGTGGCAGTTTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNTQGQQ*VAVFLS
Trigger: AGAGAGAAAAACTGCCACCAACTGCTGTCCTTGTGT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTGTTGTAGTTTTTGCTTaGACTGTAGGTGCTATTGCA +
Preference number: 5 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSVVVFA*TVGAIA
Trigger: TGCAATAGCACCTACAGTCAAAGCAAAAACTACAAC...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp AAACATGCAGTCAGAAATAGTGACCTTCCACCGAAGCTTTCTGAAGTCTATTCTAAAACAAACTATAGCTaGAGAGCCAGTAATTGCAAC +
Preference number: 5 (lower is better)
Translates to: KHAVRNSDLPPKLSEVYSKTNYS*RASNCN
Trigger: GTTGCAATTACTGGCTCTCAAGCTATAGTTTGTTTT...AGAATAGACTTCAGAAAGCTTCGGTGGAAGGTCACTATTTCTGACTGCATGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp CATAACCAAGCATTTTCATCGTTGTCACACTATTGTAAACCACATCAGCAAGTTATCTGGATCAAGTCATaGGCTGTTCTGTTTACGCAA +
Preference number: 5 (lower is better)
Translates to: HNQAFSSLSHYCKPHQQVIWIKS*AVLFTQ
Trigger: TTGCGTAAACAGAACAGCCAATGACTTGATCCAGAT...AACTTGCTGATGTGGTTTACAATAGTGTGACAACGATGAAAATGCTTGGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000412050.8
CDS-3UTR CAA 90 bp ACTCTTTCACAATCCTGGTCAGTCGCGCACAATCAACACTTGATTAGAAATATACAAGCATTTTCATCGTaGTCACACTATTGTAAACCA +
Preference number: 5 (lower is better)
Translates to: TLSQSWSVAHNQHLIRNIQAFSS*SHYCKP
Trigger: TGGTTTACAATAGTGTGACAACGATGAAAATGCTTG...TATATTTCTAATCAAGTGTTGATTGTGCGCGACTGACCAGGATTGTGAAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ACAAAAACAAGCAACACTAACTTAAGACAGTACAAGGACATCACAGCACAGAAACATCCACAAATTTGCTaGAAGAATATCCTACACCTA +
Preference number: 5 (lower is better)
Translates to: TKTSNTNLRQYKDITAQKHPQIC*KNILHL
Trigger: TAGGTGTAGGATATTCTTCAAGCAAATTTGTGGATG...TTTCTGTGCTGTGATGTCCTTGTACTGTCTTAAGTTAGTGTTGCTTGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCATCCACAAATTTGCTaGAAGAATATCCTACACCTA +
Preference number: 5 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNHPQIC*KNILHL
Trigger: TAGGTGTAGGATATTCTTCAAGCAAATTTGTGGATG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATAAAACAAACTATAGCTaGAGAGCCAGTAATTGCAAC +
Preference number: 5 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNKTNYS*RASNCN
Trigger: GTTGCAATTACTGGCTCTCAAGCTATAGTTTGTTTT...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS-3UTR CAA 90 bp ATTTCACAATATATAACAGAGCACCGCAAAGTACTTCATCTACCATCCACAAATCAAGCATTTTCATCGTaGTCACACTATTGTAAACCA +
Preference number: 5 (lower is better)
Translates to: ISQYITEHRKVLHLPSTNQAFSS*SHYCKP
Trigger: TGGTTTACAATAGTGTGACAACGATGAAAATGCTTG...ATTTGTGGATGGTAGATGAAGTACTTTGCGGTGCTCTGTTATATATTGTGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 90 bp GCGGCTGCGGCAGCAGCGGCTGCAACCGCCGAAGACGAGGACGGCTaGCTGGTCATGATGGGCTGGTGGCCGTACGCCGCGGCGGCGCTC +
Preference number: 6 (lower is better)
Translates to: AAAAAAAATAEDEDG*LVMMGWWPYAAAAL
Trigger: GAGCGCCGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGCAAGCCGTCCTCGTCTTCGGCGGTTGCAGCCGCTGCTGCCGCAGCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 90 bp ACCGCCCGGCGAGGGTCCCGGCCCGCCTGCAGGCCGCCCCAGGGGTaGGACGGTGCGCTCCAGGCTGCATTCACGCTTTGGTGCGTGTTC +
Preference number: 6 (lower is better)
Translates to: TARRGSRPACRPPQG*DGALQAAFTLWCVF
Trigger: GAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTGCAGGCGGGCCGGGACCCTCGCCGGGCGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp GCCGAAGACGAGGACGGCTTGCTGGTCATGATGGGCTaGTGGCCGTACGCCGCGGCGGCGCTCCTCTGCGCG +
Preference number: 6 (lower is better)
Translates to: AEDEDGLLVMMG*WPYAAAALLCA
Trigger: CGCGCAGAGGAGCGCCGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGCAAGCCGTCCTCGTCTTCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 90 bp GCCGCCCCAGGGGTTGGACGGTGCGCTCCAGGCTGCATTCACGCTTaGGTGCGTGTTCCAGCTGGACGAGGCCGACGAGGCGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: AAPGVGRCAPGCIHA*VRVPAGRGRRGGGC
Trigger: GCAGCCGCCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS TCA 72 bp CTGCAACCGCCGAAGACGAGGACGGCTTGCTGGTCATaGTGGGCTGGTGGCCGTACGCCGCGGCGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: LQPPKTRTACWS*WAGGRTPRRRS
Trigger: GGAGCGCCGCCGCGGCGTACGGCCACCAGCCCATCATGACCAGCAAGCCGTCCTCGTCTTCGGCGGTTGCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 72 bp TGTCCTCTACCGCGTTGGTGGTGCCCGTGGACCAGGTaGTGCCGAAGGACGGCGACAGCGACGCGCCCGGTG +
Preference number: 6 (lower is better)
Translates to: CPLPRWWCPWTR*CRRTATATRPV
Trigger: CACCGGGCGCGTCGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCGGTAGAGGACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 72 bp CCGGCCCGCCTGCAGGCCGCCCCAGGGGTTGGACGGTaGGCTCCAGGCTGCATTCACGCTTTGGTGCGTGTT +
Preference number: 6 (lower is better)
Translates to: PARLQAAPGVGR*APGCIHALVRV
Trigger: AACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTGCAGGCGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 72 bp GGGGCCGCGCGAGGGAACTTGGGCGGCGCGATCACGTaGCTGGAGAAGGGCTTTTTGAGCGGCGAGATGGGG +
Preference number: 6 (lower is better)
Translates to: GAARGNLGGAIT*LEKGFLSGEMG
Trigger: CCCCATCTCGCCGCTCAAAAAGCCCTTCTCCAGCAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 72 bp TTGGACGGTGCGCTCCAGGCTGCATTCACGCTTTGGTaGGTGTTCCAGCTGGACGAGGCCGACGAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LDGALQAAFTLW*VFQLDEADEAA
Trigger: CGCCGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 72 bp CAGGCCGCCCCAGGGGTTGGACGGTGCGCTCCAGGCTaGATTCACGCTTTGGTGCGTGTTCCAGCTGGACGA +
Preference number: 6 (lower is better)
Translates to: QAAPGVGRCAPG*IHALVRVPAGR
Trigger: TCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCCTGGGGCGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp GGAAGAAGCTGTCCTCTACCGCGTTGGTGGTGCCCGTaGACCAGGTGCTGCCGAAGGACGGCGACAGCGACG +
Preference number: 6 (lower is better)
Translates to: GRSCPLPRWWCP*TRCCRRTATAT
Trigger: CGTCGCTGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCGGTAGAGGACAGCTTCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp GGGTTGGACGGTGCGCTCCAGGCTGCATTCACGCTTTaGTGCGTGTTCCAGCTGGACGAGGCCGACGAGGCG +
Preference number: 6 (lower is better)
Translates to: GLDGALQAAFTL*CVFQLDEADEA
Trigger: CGCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 72 bp GGGGTTGGACGGTGCGCTCCAGGCTGCATTCACGCTTaGGTGCGTGTTCCAGCTGGACGAGGCCGACGAGGC +
Preference number: 6 (lower is better)
Translates to: GVGRCAPGCIHA*VRVPAGRGRRG
Trigger: GCCTCGTCGGCCTCGTCCAGCTGGAACACGCACCAAAGCGTGAATGCAGCCTGGAGCGCACCGTCCAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 72 bp TCCCCTGGAAGAAGCTGTCCTCTACCGCGTTGGTGGTaGCCGTGGACCAGGTGCTGCCGAAGGACGGCGACA +
Preference number: 6 (lower is better)
Translates to: SPGRSCPLPRWW*PWTRCCRRTAT
Trigger: TGTCGCCGTCCTTCGGCAGCACCTGGTCCACGGGCACCACCAACGCGGTAGAGGACAGCTTCTTCCAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 72 bp GGCTGCTGGTGGTGCTGGGTCTGCGCCAGGCCGATCTaGGGGGAGAAAGTGCCTCCGAAGACTGGGTTGACA +
Preference number: 6 (lower is better)
Translates to: GCWWCWVCARPI*GEKVPPKTGLT
Trigger: TGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCAGACCCAGCACCACCAGCAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp GTTATCTACTCCAGTACTTGTGGCTGGGTCGGCCCGTaGCTCAGCTCCAGCGGAACGGGACGTGACGAGGGC +
Preference number: 6 (lower is better)
Translates to: VIYSSTCGWVGP*LSSSGTGRDEG
Trigger: GCCCTCGTCACGTCCCGTTCCGCTGGAGCTGAGCCACGGGCCGACCCAGCCACAAGTACTGGAGTAGATAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 72 bp CAGGACTTGGAAGTGAGAGGGGCCGCGCGAGGGAACTaGGGCGGCGCGATCACGTTGCTGGAGAAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: QDLEVRGAARGN*GGAITLLEKGF
Trigger: AAAGCCCTTCTCCAGCAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 90 bp TCCTCCATCCAGGACTTGGAAGTGAGAGGGGCCGCGCGAGGGAACTaGGGCGGCGCGATCACGTTGCTGGAGAAGGGCTTTTTGAGCGGC +
Preference number: 6 (lower is better)
Translates to: SSIQDLEVRGAARGN*GGAITLLEKGFLSG
Trigger: GCCGCTCAAAAAGCCCTTCTCCAGCAACGTGATCGCGCCGCCCAAGTTCCCTCGCGCGGCCCCTCTCACTTCCAAGTCCTGGATGGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS TCA 72 bp AGGAGGCTGATGGAAACTCAAGCCTGGCAGGAGCGGTaGTTCCATCTGCATCTTGTCCGGGCCGTTGGGGGC +
Preference number: 6 (lower is better)
Translates to: RRLMETQAWQER*FHLHLVRAVGG
Trigger: GCCCCCAACGGCCCGGACAAGATGCAGATGGAATCACCGCTCCTGCCAGGCTTGAGTTTCCATCAGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp TCCTGCATGGTTTGCGCAGCTTGTTGCTACCGACAGTaGAGCGGCGCATCCTGCTGCTTCCTGGAAAGCGGC +
Preference number: 6 (lower is better)
Translates to: SCMVCAACCYRQ*SGASCCFLESG
Trigger: GCCGCTTTCCAGGAAGCAGCAGGATGCGCCGCTCCACTGTCGGTAGCAACAAGCTGCGCAAACCATGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS CCA 72 bp TGGAAGAGCATGGTCCCGTTGACTGGGGTGATCCCCTaGAAGAAGCTGTCCTCTACCGCGTTGGTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: WKSMVPLTGVIP*KKLSSTALVVP
Trigger: GGGCACCACCAACGCGGTAGAGGACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 90 bp TGCGCCAGGCCGATCTGCGGGGAGAAAGTGCCTCCGAAGACTGGGTaGACATGGTGCGGGAAGTTCTGGAAGAGCATGGTCCCGTTGACT +
Preference number: 6 (lower is better)
Translates to: CARPICGEKVPPKTG*TWCGKFWKSMVPLT
Trigger: AGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTGGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp GTGCGGGAAGTTCTGGAAGAGCATGGTCCCGTTGACTaGGGTGATCCCCTGGAAGAAGCTGTCCTCTACCGC +
Preference number: 6 (lower is better)
Translates to: VREVLEEHGPVD*GDPLEEAVLYR
Trigger: GCGGTAGAGGACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp CCTCCGAAGACTGGGTTGACATGGTGCGGGAAGTTCTaGAAGAGCATGGTCCCGTTGACTGGGGTGATCCCC +
Preference number: 6 (lower is better)
Translates to: PPKTGLTWCGKF*KSMVPLTGVIP
Trigger: GGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 90 bp ACTGGGTTGACATGGTGCGGGAAGTTCTGGAAGAGCATGGTCCCGTaGACTGGGGTGATCCCCTGGAAGAAGCTGTCCTCTACCGCGTTG +
Preference number: 6 (lower is better)
Translates to: TGLTWCGKFWKSMVP*TGVIPWKKLSSTAL
Trigger: CAACGCGGTAGAGGACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS TCA 72 bp CGATCTGCGGGGAGAAAGTGCCTCCGAAGACTGGGTTaGCATGGTGCGGGAAGTTCTGGAAGAGCATGGTCC +
Preference number: 6 (lower is better)
Translates to: RSAGRKCLRRLG*HGAGSSGRAWS
Trigger: GGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp TGCGGGGAGAAAGTGCCTCCGAAGACTGGGTTGACATaGTGCGGGAAGTTCTGGAAGAGCATGGTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: CGEKVPPKTGLT*CGKFWKSMVPL
Trigger: CAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp CAGGCCGATCTGCGGGGAGAAAGTGCCTCCGAAGACTaGGTTGACATGGTGCGGGAAGTTCTGGAAGAGCAT +
Preference number: 6 (lower is better)
Translates to: QADLRGESASED*VDMVREVLEEH
Trigger: ATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CCA 72 bp TTTTCCCTCCTTGTTATCTACTCCAGTACTTGTGGCTaGGTCGGCCCGTGGCTCAGCTCCAGCGGAACGGGA +
Preference number: 6 (lower is better)
Translates to: FSLLVIYSSTCG*VGPWLSSSGTG
Trigger: TCCCGTTCCGCTGGAGCTGAGCCACGGGCCGACCCAGCCACAAGTACTGGAGTAGATAACAAGGAGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 72 bp CCGATCTGCGGGGAGAAAGTGCCTCCGAAGACTGGGTaGACATGGTGCGGGAAGTTCTGGAAGAGCATGGTC +
Preference number: 6 (lower is better)
Translates to: PICGEKVPPKTG*TWCGKFWKSMV
Trigger: GACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCCGCAGATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 72 bp GCAGCTTGTTGCTACCGACAGTGGAGCGGCGCATCCTaGTGCTTCCTGGAAAGCGGCCCGAAAGACATTTTT +
Preference number: 6 (lower is better)
Translates to: AACCYRQWSGAS*CFLESGPKDIF
Trigger: AAAAATGTCTTTCGGGCCGCTTTCCAGGAAGCAGCAGGATGCGCCGCTCCACTGTCGGTAGCAACAAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS GCA 72 bp GGGGAGAAAGTGCCTCCGAAGACTGGGTTGACATGGTaGGGGAAGTTCTGGAAGAGCATGGTCCCGTTGACT +
Preference number: 6 (lower is better)
Translates to: GEKVPPKTGLTW*GKFWKSMVPLT
Trigger: AGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGTCAACCCAGTCTTCGGAGGCACTTTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 72 bp ACATGGTGCGGGAAGTTCTGGAAGAGCATGGTCCCGTaGACTGGGGTGATCCCCTGGAAGAAGCTGTCCTCT +
Preference number: 6 (lower is better)
Translates to: TWCGKFWKSMVP*TGVIPWKKLSS
Trigger: AGAGGACAGCTTCTTCCAGGGGATCACCCCAGTCAACGGGACCATGCTCTTCCAGAACTTCCCGCACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS TCA 72 bp TGCCAGCATAGCAGACACCACCGTACAAACGGTCCATaGTCATTGCCAGTTCAACAGCTCGAAGGGGTCGTG +
Preference number: 6 (lower is better)
Translates to: CQHSRHHRTNGP*SLPVQQLEGVV
Trigger: CACGACCCCTTCGAGCTGTTGAACTGGCAATGATCATGGACCGTTTGTACGGTGGTGTCTGCTATGCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS GCA 72 bp CACCTTTGGGGTACTTCAGCTCTGGGTCCGTATCAATaGCAGCATAGCAGACACCACCGTACAAACGGTCCA +
Preference number: 6 (lower is better)
Translates to: HLWGTSALGPYQ*QHSRHHRTNGP
Trigger: TGGACCGTTTGTACGGTGGTGTCTGCTATGCTGGCATTGATACGGACCCAGAGCTGAAGTACCCCAAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS TCA 72 bp CAGCGAGTGGGAGAACTTAAGCCAGATGACAAGGCTTaGTCACCATGGCTATCATCCAGGAAGGCATCTTCA +
Preference number: 6 (lower is better)
Translates to: QRVGELKPDDKA*SPWLSSRKASS
Trigger: TGAAGATGCCTTCCTGGATGATAGCCATGGTGATCAAGCCTTGTCATCTGGCTTAAGTTCTCCCACTCGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412050.8
CDS GCA 72 bp GGCTGGGTTTTGCTTTTGTCCATCAGTAAATCATCCTaGATGGTTTGCGCAGCTTGTTGCTACCGACAGTGG +
Preference number: 6 (lower is better)
Translates to: GWVLLLSISKSS*MVCAACCYRQW
Trigger: CCACTGTCGGTAGCAACAAGCTGCGCAAACCATGCAGGATGATTTACTGATGGACAAAAGCAAAACCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS CCA 72 bp GGGTTTTGCTTTTGTCCATCAGTAAATCATCCTGCATaGTTTGCGCAGCTTGTTGCTACCGACAGTGGAGCG +
Preference number: 6 (lower is better)
Translates to: GFCFCPSVNHPA*FAQLVATDSGA
Trigger: CGCTCCACTGTCGGTAGCAACAAGCTGCGCAAACCATGCAGGATGATTTACTGATGGACAAAAGCAAAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265997.5
CDS TCA 72 bp CAGCGAGTGGGAGAACTTAAGCCAGATGACAAGGCTTaGTCACCATGGCTATCATCCAGGAAGGCATTGTTA +
Preference number: 6 (lower is better)
Translates to: QRVGELKPDDKA*SPWLSSRKALL
Trigger: TAACAATGCCTTCCTGGATGATAGCCATGGTGATCAAGCCTTGTCATCTGGCTTAAGTTCTCCCACTCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS TCA 72 bp GGCTTTACTTCAACCCGTTTGTCAATGTCATTGTGCTaGAGCTGCACAAAACGAGCGCTGATGGCTGCAATG +
Preference number: 6 (lower is better)
Translates to: GFTSTRLSMSLC*SCTKRALMAAM
Trigger: CATTGCAGCCATCAGCGCTCGTTTTGTGCAGCTTCAGCACAATGACATTGACAAACGGGTTGAAGTAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265997.5
ENST00000412050.8
ENST00000614585.4
CDS CAA 90 bp TGCGTCCTGCAAAATGATTCCTCCACATTATATCAGCGAAACTCATaGGTGGGCCACTGGGAGGGTAGTGTTTACCTTTCAGAGGTTCAT +
Preference number: 6 (lower is better)
Translates to: CVLQNDSSTLYQRNS*VGHWEGSVYLSEVH
Trigger: ATGAACCTCTGAAAGGTAAACACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATATAATGTGGAGGAATCATTTTGCAGGACGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS CCA 72 bp ATGATTCCTCCACATTATATCAGCGAAACTCATTGGTaGGCCACTGGGAGGGTAGTGTTTACCTTTCAGAGG +
Preference number: 6 (lower is better)
Translates to: MIPPHYISETHW*ATGRVVFTFQR
Trigger: CCTCTGAAAGGTAAACACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATATAATGTGGAGGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS CCA 72 bp TCCACATTATATCAGCGAAACTCATTGGTGGGCCACTaGGAGGGTAGTGTTTACCTTTCAGAGGTTCATGAT +
Preference number: 6 (lower is better)
Translates to: STLYQRNSLVGH*EGSVYLSEVHD
Trigger: ATCATGAACCTCTGAAAGGTAAACACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATATAATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS CCA 72 bp AAAATGATTCCTCCACATTATATCAGCGAAACTCATTaGTGGGCCACTGGGAGGGTAGTGTTTACCTTTCAG +
Preference number: 6 (lower is better)
Translates to: KMIPPHYISETH*WATGRVVFTFQ
Trigger: CTGAAAGGTAAACACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATATAATGTGGAGGAATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4
CDS CAA 72 bp CAAAATGATTCCTCCACATTATATCAGCGAAACTCATaGGTGGGCCACTGGGAGGGTAGTGTTTACCTTTCA +
Preference number: 6 (lower is better)
Translates to: QNDSSTLYQRNS*VGHWEGSVYLS
Trigger: TGAAAGGTAAACACTACCCTCCCAGTGGCCCACCAATGAGTTTCGCTGATATAATGTGGAGGAATCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265997.5
ENST00000614585.4