Pregenerated sensors for CPEB2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000247624Ensembl transcript IDs: ENST00000500394.6, ENST00000501916.1, ENST00000634352.1, ENST00000634975.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ATCGTGGCAGAAATTACTGGAGAGGCTGACAGGTTCTCTCCTAGGTaGGGGTATTGGAGTGGGATGATAAATCCCCTGGATGCCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: IVAEITGEADRFSPR*GYWSGMINPLDATK Trigger: CTTTGTGGCATCCAGGGGATTTATCATCCCACTCCAATACCCCCACCTAGGAGAGAACCTGTCAGCCTCTCCAGTAATTTCTGCCACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS CCA 90 bp | GAAATTACTGGAGAGGCTGACAGGTTCTCTCCTAGGTGGGGGTATTaGAGTGGGATGATAAATCCCCTGGATGCCACAAAGGGTAACACA | + |
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Preference number: 5 (lower is better) Translates to: EITGEADRFSPRWGY*SGMINPLDATKGNT Trigger: TGTGTTACCCTTTGTGGCATCCAGGGGATTTATCATCCCACTCCAATACCCCCACCTAGGAGAGAACCTGTCAGCCTCTCCAGTAATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS GCA 90 bp | TGTCGCAATATTTCATATCAGACCTTTTGGAGAGGGTCAGAGGTGTaGTGTCAGCTTTCCAGAAAGAAACCTCCAGCAAATACCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: CRNISYQTFWRGSEV*CQLSRKKPPANTRF Trigger: AAACCTGGTATTTGCTGGAGGTTTCTTTCTGGAAAGCTGACAGCACACCTCTGACCCTCTCCAAAAGGTCTGATATGAAATATTGCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS GCA 90 bp | TTGGCGCCTTCCCATTGTTGCATGCTATTAGCACATCTACTGAAATaGCTGCCAGTTGATTCCAACTTTGTCGCAATATTTCATATCAGA | + |
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Preference number: 5 (lower is better) Translates to: LAPSHCCMLLAHLLK*LPVDSNFVAIFHIR Trigger: TCTGATATGAAATATTGCGACAAAGTTGGAATCAACTGGCAGGCATTTCAGTAGATGTGCTAATAGCATGCAACAATGGGAAGGCGCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS TCA 90 bp | CCATTGTTGCATGCTATTAGCACATCTACTGAAATGCCTGCCAGTTaGTTCCAACTTTGTCGCAATATTTCATATCAGACCTTTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: PLLHAISTSTEMPAS*FQLCRNISYQTFWR Trigger: TCTCCAAAAGGTCTGATATGAAATATTGCGACAAAGTTGGAATCAACTGGCAGGCATTTCAGTAGATGTGCTAATAGCATGCAACAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS TCA 72 bp | CCTACAGAAACACCCTCGGCGGCTCTACGACGTCGGTaGCAGCACTCCTACCAGCGCAGTGCAGGCGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: PTETPSAALRRR*QHSYQRSAGAG Trigger: ACCGGCGCCTGCACTGCGCTGGTAGGAGTGCTGTCACCGACGTCGTAGAGCCGCCGAGGGTGTTTCTGTAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CCA 72 bp | GGAGAGGCTGACAGGTTCTCTCCTAGGTGGGGGTATTaGAGTGGGATGATAAATCCCCTGGATGCCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: GEADRFSPRWGY*SGMINPLDATK Trigger: CTTTGTGGCATCCAGGGGATTTATCATCCCACTCCAATACCCCCACCTAGGAGAGAACCTGTCAGCCTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS CCA 72 bp | GAAATTACTGGAGAGGCTGACAGGTTCTCTCCTAGGTaGGGGTATTGGAGTGGGATGATAAATCCCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: EITGEADRFSPR*GYWSGMINPLD Trigger: ATCCAGGGGATTTATCATCCCACTCCAATACCCCCACCTAGGAGAGAACCTGTCAGCCTCTCCAGTAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS CAA 72 bp | TACTCAATGGATTGTGCAAAACTCCTAGGACAGTGTTaGGCAGAGAGCAGGCCCTCCTCTCCTTCCTACTGT | + |
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Preference number: 6 (lower is better) Translates to: YSMDCAKLLGQC*AESRPSSPSYC Trigger: ACAGTAGGAAGGAGAGGAGGGCCTGCTCTCTGCCAAACACTGTCCTAGGAGTTTTGCACAATCCATTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS CAA 90 bp | GCAGAGAGCAGGCCCTCCTCTCCTTCCTACTGTATAGCAAACGTCTaGAGAATAGGAACATGTCCACACGGTGTTTTGTACTTAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: AESRPSSPSYCIANV*RIGTCPHGVLYLTG Trigger: GCCTGTTAAGTACAAAACACCGTGTGGACATGTTCCTATTCTCAAGACGTTTGCTATACAGTAGGAAGGAGAGGAGGGCCTGCTCTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS TCA 72 bp | AGGCAAGAATTGGTTTTCACCTCAGTAAACCTATTTTaGGCACCTGCTGGGCTGAAAGCACGCAGCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: RQELVFTSVNLF*APAGLKARSWM Trigger: CATCCAGCTGCGTGCTTTCAGCCCAGCAGGTGCTCAAAATAGGTTTACTGAGGTGAAAACCAATTCTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 72 bp | TCACCACCTCAGTTCAGTTTTGGCGCCTTCCCATTGTaGCATGCTATTAGCACATCTACTGAAATGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SPPQFSFGAFPL*HAISTSTEMPA Trigger: GGCAGGCATTTCAGTAGATGTGCTAATAGCATGCAACAATGGGAAGGCGCCAAAACTGAACTGAGGTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 90 bp | CACCCTTTAGAGGCAAGAATTGGTTTTCACCTCAGTAAACCTATTTaGAGCACCTGCTGGGCTGAAAGCACGCAGCTGGATGTGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: HPLEARIGFHLSKPI*STCWAESTQLDVLK Trigger: TTTCAACACATCCAGCTGCGTGCTTTCAGCCCAGCAGGTGCTCAAAATAGGTTTACTGAGGTGAAAACCAATTCTTGCCTCTAAAGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 72 bp | AGGCCCTCCTCTCCTTCCTACTGTATAGCAAACGTCTaGAGAATAGGAACATGTCCACACGGTGTTTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: RPSSPSYCIANV*RIGTCPHGVLY Trigger: GTACAAAACACCGTGTGGACATGTTCCTATTCTCAAGACGTTTGCTATACAGTAGGAAGGAGAGGAGGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS CAA 90 bp | TCAGCTCTGCCTTCCACTCTACCTTACTGGTTTTTAAATAGAGTGTaGGTACGTCCAGAGCTGTGTACCTTTTGGGAAGATTGCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SALPSTLPYWFLNRV*VRPELCTFWEDCPE Trigger: TTCTGGGCAATCTTCCCAAAAGGTACACAGCTCTGGACGTACCAACACTCTATTTAAAAACCAGTAAGGTAGAGTGGAAGGCAGAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 90 bp | TGCCAGTTGATTCCAACTTTGTCGCAATATTTCATATCAGACCTTTaGGAGAGGGTCAGAGGTGTGCTGTCAGCTTTCCAGAAAGAAACC | + |
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Preference number: 6 (lower is better) Translates to: CQLIPTLSQYFISDL*ERVRGVLSAFQKET Trigger: GGTTTCTTTCTGGAAAGCTGACAGCACACCTCTGACCCTCTCCAAAAGGTCTGATATGAAATATTGCGACAAAGTTGGAATCAACTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 90 bp | CGGTACTTGCTTATCTCTACCTCATTTCACCACCTCAGTTCAGTTTaGGCGCCTTCCCATTGTTGCATGCTATTAGCACATCTACTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RYLLISTSFHHLSSV*APSHCCMLLAHLLK Trigger: TTTCAGTAGATGTGCTAATAGCATGCAACAATGGGAAGGCGCCAAAACTGAACTGAGGTGGTGAAATGAGGTAGAGATAAGCAAGTACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS GCA 72 bp | ATTTCATATCAGACCTTTTGGAGAGGGTCAGAGGTGTaGTGTCAGCTTTCCAGAAAGAAACCTCCAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: ISYQTFWRGSEV*CQLSRKKPPAN Trigger: ATTTGCTGGAGGTTTCTTTCTGGAAAGCTGACAGCACACCTCTGACCCTCTCCAAAAGGTCTGATATGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CCA 72 bp | AAGGAAGAGGATGACTCATGTTTCAGCTTGAGAAACTaGTTGTGTGATGATGACGTCAGCCAAGACAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: KEEDDSCFSLRN*LCDDDVSQDKK Trigger: CTTCTTGTCTTGGCTGACGTCATCATCACACAACCAGTTTCTCAAGCTGAAACATGAGTCATCCTCTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS CCA 72 bp | TTCCAACTTTGTCGCAATATTTCATATCAGACCTTTTaGAGAGGGTCAGAGGTGTGCTGTCAGCTTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FQLCRNISYQTF*RGSEVCCQLSR Trigger: TCTGGAAAGCTGACAGCACACCTCTGACCCTCTCCAAAAGGTCTGATATGAAATATTGCGACAAAGTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 72 bp | GAAGAGGATGACTCATGTTTCAGCTTGAGAAACTGGTaGTGTGATGATGACGTCAGCCAAGACAAGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: EEDDSCFSLRNW*CDDDVSQDKKQ Trigger: TTGCTTCTTGTCTTGGCTGACGTCATCATCACACAACCAGTTTCTCAAGCTGAAACATGAGTCATCCTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS CAA 72 bp | ATTCCAACTTTGTCGCAATATTTCATATCAGACCTTTaGGAGAGGGTCAGAGGTGTGCTGTCAGCTTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IPTLSQYFISDL*ERVRGVLSAFQ Trigger: CTGGAAAGCTGACAGCACACCTCTGACCCTCTCCAAAAGGTCTGATATGAAATATTGCGACAAAGTTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 72 bp | ATTTCACCACCTCAGTTCAGTTTTGGCGCCTTCCCATaGTTGCATGCTATTAGCACATCTACTGAAATGCCT | + |
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Preference number: 6 (lower is better) Translates to: ISPPQFSFGAFP*LHAISTSTEMP Trigger: AGGCATTTCAGTAGATGTGCTAATAGCATGCAACAATGGGAAGGCGCCAAAACTGAACTGAGGTGGTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 72 bp | CTTATCTCTACCTCATTTCACCACCTCAGTTCAGTTTaGGCGCCTTCCCATTGTTGCATGCTATTAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: LISTSFHHLSSV*APSHCCMLLAH Trigger: ATGTGCTAATAGCATGCAACAATGGGAAGGCGCCAAAACTGAACTGAGGTGGTGAAATGAGGTAGAGATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 72 bp | CCTTCCACTCTACCTTACTGGTTTTTAAATAGAGTGTaGGTACGTCCAGAGCTGTGTACCTTTTGGGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: PSTLPYWFLNRV*VRPELCTFWED Trigger: ATCTTCCCAAAAGGTACACAGCTCTGGACGTACCAACACTCTATTTAAAAACCAGTAAGGTAGAGTGGAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS GCA 72 bp | GTTGAAAATATGTCTCTTCCCTTTCACCCATGTCAATaGATATCAACCACAATCACCCTCCAAGGCTCATAT | + |
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Preference number: 6 (lower is better) Translates to: VENMSLPFHPCQ*ISTTITLQGSY Trigger: ATATGAGCCTTGGAGGGTGATTGTGGTTGATATGCATTGACATGGGTGAAAGGGAAGAGACATATTTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS TCA 72 bp | CATGCTATTAGCACATCTACTGAAATGCCTGCCAGTTaGTTCCAACTTTGTCGCAATATTTCATATCAGACC | + |
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Preference number: 6 (lower is better) Translates to: HAISTSTEMPAS*FQLCRNISYQT Trigger: GGTCTGATATGAAATATTGCGACAAAGTTGGAATCAACTGGCAGGCATTTCAGTAGATGTGCTAATAGCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS GCA 72 bp | TCCCATTGTTGCATGCTATTAGCACATCTACTGAAATaGCTGCCAGTTGATTCCAACTTTGTCGCAATATTT | + |
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Preference number: 6 (lower is better) Translates to: SHCCMLLAHLLK*LPVDSNFVAIF Trigger: AAATATTGCGACAAAGTTGGAATCAACTGGCAGGCATTTCAGTAGATGTGCTAATAGCATGCAACAATGGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000500394.6 ENST00000634975.1 |
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| CDS CAA 72 bp | AACGTCTTGAGAATAGGAACATGTCCACACGGTGTTTaGTACTTAACAGGCATTGGAAACAGATTTGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: NVLRIGTCPHGV*YLTGIGNRFAE Trigger: TTCTGCAAATCTGTTTCCAATGCCTGTTAAGTACAAAACACCGTGTGGACATGTTCCTATTCTCAAGACGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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| CDS CAA 90 bp | CATTATACTTTTATACATCTGTCCTTGTTGGCCTTCCCTTATTATTaGTTAATTTCAAAATGGCTGCAATGGATCCAGACTCTCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HYTFIHLSLLAFPYY*LISKWLQWIQTLSG Trigger: CCCTGAGAGAGTCTGGATCCATTGCAGCCATTTTGAAATTAACAAATAATAAGGGAAGGCCAACAAGGACAGATGTATAAAAGTATAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000501916.1 ENST00000634352.1 |
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