RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPAMD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000160111

Ensembl transcript IDs: ENST00000291440.4, ENST00000388925.8, ENST00000443236.7, ENST00000593420.5, ENST00000593739.1, ENST00000594249.5, ENST00000594249.6, ENST00000596224.5, ENST00000597335.5, ENST00000597709.1, ENST00000598792.1, ENST00000600235.5, ENST00000601637.1, ENST00000601782.5, ENST00000651564.1, ENST00000682780.1

Found 477 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCTCGGGCTGAGGAAGGAGCCACAGGGCCTGTCGCTTGTAGGGTaGCAGGGGTGGGGAACCCACCGGCCAGGGCAGCCTCAGACCTTG +
Preference number: 1 (lower is better)
Translates to: GLGLRKEPQGLSLVG*QGWGTHRPGQPQTL
Trigger: CAAGGTCTGAGGCTGCCCTGGCCGGTGGGTTCCCCACCCCTGGCACCCTACAAGCGACAGGCCCTGTGGCTCCTTCCTCAGCCCGAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 90 bp AGGACCCTGCCCACGGCCAGGAAGGAGCCATCGGCCTGCTGCTGCTaGATGATCCAGCTCTTGGCGGCAGCCAGCTCCCGGGGGTCCACG +
Preference number: 1 (lower is better)
Translates to: RTLPTARKEPSACCC*MIQLLAAASSRGST
Trigger: CGTGGACCCCCGGGAGCTGGCTGCCGCCAAGAGCTGGATCATCCAGCAGCAGCAGGCCGATGGCTCCTTCCTGGCCGTGGGCAGGGTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 90 bp TTCAGGACCCTGCCCACGGCCAGGAAGGAGCCATCGGCCTGCTGCTaGTGGATGATCCAGCTCTTGGCGGCAGCCAGCTCCCGGGGGTCC +
Preference number: 1 (lower is better)
Translates to: FRTLPTARKEPSACC*WMIQLLAAASSRGS
Trigger: GGACCCCCGGGAGCTGGCTGCCGCCAAGAGCTGGATCATCCAGCAGCAGCAGGCCGATGGCTCCTTCCTGGCCGTGGGCAGGGTCCTGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 90 bp TTGTTCAGGACCCTGCCCACGGCCAGGAAGGAGCCATCGGCCTGCTaGTGCTGGATGATCCAGCTCTTGGCGGCAGCCAGCTCCCGGGGG +
Preference number: 1 (lower is better)
Translates to: LFRTLPTARKEPSAC*CWMIQLLAAASSRG
Trigger: CCCCCGGGAGCTGGCTGCCGCCAAGAGCTGGATCATCCAGCAGCAGCAGGCCGATGGCTCCTTCCTGGCCGTGGGCAGGGTCCTGAACAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 90 bp TCGCATGATGGCCAGGCTACGGAGCTTGCGCAGTGCCTCAGGGGCTaGCGGGCTGCGGAGCAGGGTCAGCGCGTAGGTAGTCAGGGCACA +
Preference number: 1 (lower is better)
Translates to: SHDGQATELAQCLRG*RAAEQGQRVGSQGT
Trigger: TGTGCCCTGACTACCTACGCGCTGACCCTGCTCCGCAGCCCGGCAGCCCCTGAGGCACTGCGCAAGCTCCGTAGCCTGGCCATCATGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp GATGATGGAGGCGGTGGCTCGCTCAGACCCAGGGATGGCGCCGTGTaGGACCCCCAGGGTGAAGGCCTCGCTGTAGCTCTCGTCCACCTC +
Preference number: 1 (lower is better)
Translates to: DDGGGGSLRPRDGAV*DPQGEGLAVALVHL
Trigger: GAGGTGGACGAGAGCTACAGCGAGGCCTTCACCCTGGGGGTCCCACACGGCGCCATCCCTGGGTCTGAGCGAGCCACCGCCTCCATCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp GCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTaGCAGCGCCGACGTCCTGCCCACCACGCACTCCCGGAGAGCACG +
Preference number: 1 (lower is better)
Translates to: ASGLEGGFVVVVHGD*QRRRPAHHALPEST
Trigger: CGTGCTCTCCGGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 90 bp GGAGTGGGCTGGTCCTCTGGGCACGAGGACATCAGGAACTCACGGTaGGGAAGCACCGGGGTCACCCAGCCCCGGCAGCCGGAAGCTGAA +
Preference number: 1 (lower is better)
Translates to: GVGWSSGHEDIRNSR*GSTGVTQPRQPEAE
Trigger: TTCAGCTTCCGGCTGCCGGGGCTGGGTGACCCCGGTGCTTCCTCACCGTGAGTTCCTGATGTCCTCGTGCCCAGAGGACCAGCCCACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 90 bp CGGGTTCGTAGTAGTCGTACACGGAGACTGGCAGCGCCGACGTCCTaGCCACCACGCACTCCCGGAGAGCACGGAACCGCACGCACGTCA +
Preference number: 1 (lower is better)
Translates to: RVRSSRTRRLAAPTS*PPRTPGEHGTARTS
Trigger: TGACGTGCGTGCGGTTCCGTGCTCTCCGGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGCCAGTCTCCGTGTACGACTACTACGAACCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CTCCACTTCGTTGCACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTaGGCTGTGGGTGCTGACGTTGTAGAAGCGAGTGGCCTCGAAGGC +
Preference number: 1 (lower is better)
Translates to: LHFVARGSGAQFPGE*AVGADVVEASGLEG
Trigger: GCCTTCGAGGCCACTCGCTTCTACAACGTCAGCACCCACAGCCCACTCGCCCGGGAACTGTGCGCCGGACCCGCGTGCAACGAAGTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 90 bp TGGCTCGCTCAGACCCAGGGATGGCGCCGTGTGGGACCCCCAGGGTaGAGGCCTCGCTGTAGCTCTCGTCCACCTCCATCTTCCTCCAGA +
Preference number: 1 (lower is better)
Translates to: WLAQTQGWRRVGPPG*RPRCSSRPPPSSSR
Trigger: TCTGGAGGAAGATGGAGGTGGACGAGAGCTACAGCGAGGCCTTCACCCTGGGGGTCCCACACGGCGCCATCCCTGGGTCTGAGCGAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 90 bp ACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTGGGCTGTGGGTGCTaGCGTTGTAGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGT +
Preference number: 1 (lower is better)
Translates to: TRVRRTVPGRVGCGC*RCRSEWPRRRVRSS
Trigger: ACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCTACAACGTCAGCACCCACAGCCCACTCGCCCGGGAACTGTGCGCCGGACCCGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CTGAGGAAGGAGCCACAGGGCCTGTCGCTTGTAGGGTGCCAGGGGTaGGGAACCCACCGGCCAGGGCAGCCTCAGACCTTGATCTCACAG +
Preference number: 1 (lower is better)
Translates to: LRKEPQGLSLVGCQG*GTHRPGQPQTLISQ
Trigger: CTGTGAGATCAAGGTCTGAGGCTGCCCTGGCCGGTGGGTTCCCCACCCCTGGCACCCTACAAGCGACAGGCCCTGTGGCTCCTTCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 90 bp TATGTCTCTGAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTaGCGCTCTGGGTGCTGCTTTCCAGGTTCCCGCTGCTCACAGGAG +
Preference number: 1 (lower is better)
Translates to: YVSEGPESGPICGTG*RSGCCFPGSRCSQE
Trigger: CTCCTGTGAGCAGCGGGAACCTGGAAAGCAGCACCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTCAGAGACATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388925.8
ENST00000594249.5
3UTR CCA 90 bp ACTCTGAAAGGCTGGGCTGTAGACGAAGACAGGGCTCAGAAGCCCTaGCCTGTGGGCCCCCACCACCCGGCCACTATGTCTCTGAGGGGC +
Preference number: 1 (lower is better)
Translates to: TLKGWAVDEDRAQKP*PVGPHHPATMSLRG
Trigger: GCCCCTCAGAGACATAGTGGCCGGGTGGTGGGGGCCCACAGGCCAGGGCTTCTGAGCCCTGTCTTCGTCTACAGCCCAGCCTTTCAGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000388925.8
ENST00000594249.5
3UTR CCA 90 bp GTATTCCTGGTGATGCTGATCGGCCGCTGGGTCATCATCGTCAGCTaGGGGCCAGTCTCCTCGGGAACCCTCAGCTGCGGAGGCAGGCAT +
Preference number: 1 (lower is better)
Translates to: VFLVMLIGRWVIIVS*GPVSSGTLSCGGRH
Trigger: ATGCCTGCCTCCGCAGCTGAGGGTTCCCGAGGAGACTGGCCCCCAGCTGACGATGATGACCCAGCGGCCGATCAGCATCACCAGGAATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 90 bp GGCAGCCAGCTCCCGGGGGTCCACGAAGATAAAGCTGCGAGCCTGTaGGAAGGACTTCAGGACAAAGGCTGTGAGCCACATGCTCCCCGA +
Preference number: 1 (lower is better)
Translates to: GSQLPGVHEDKAASL*EGLQDKGCEPHAPR
Trigger: TCGGGGAGCATGTGGCTCACAGCCTTTGTCCTGAAGTCCTTCGCACAGGCTCGCAGCTTTATCTTCGTGGACCCCCGGGAGCTGGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CTGCCCGGAAGCCTGACAGCAGGGGCACCTCCAGGACAGCCATATTaGAAGACCCTGCATGCAGCCACCTGGTGCACACCTCCAGCATCA +
Preference number: 1 (lower is better)
Translates to: LPGSLTAGAPPGQPY*KTLHAATWCTPPAS
Trigger: TGATGCTGGAGGTGTGCACCAGGTGGCTGCATGCAGGGTCTTCCAATATGGCTGTCCTGGAGGTGCCCCTGCTGTCAGGCTTCCGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp GGCGAAGGCAGAGGGTGCGAGAGCTGGGACAGTCTTAGGGCAATTTaGGGTCCTGGGTGCCCCAAAGGGAGGCCGGGGCTTTGTGTTTCA +
Preference number: 1 (lower is better)
Translates to: GEGRGCESWDSLRAI*GPGCPKGRPGLCVS
Trigger: TGAAACACAAAGCCCCGGCCTCCCTTTGGGGCACCCAGGACCCCAAATTGCCCTAAGACTGTCCCAGCTCTCGCACCCTCTGCCTTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 90 bp GGGTGCGAGAGCTGGGACAGTCTTAGGGCAATTTGGGGTCCTGGGTaGCCCAAAGGGAGGCCGGGGCTTTGTGTTTCAGAGAAACGCAGC +
Preference number: 1 (lower is better)
Translates to: GCESWDSLRAIWGPG*PKGRPGLCVSEKRS
Trigger: GCTGCGTTTCTCTGAAACACAAAGCCCCGGCCTCCCTTTGGGGCACCCAGGACCCCAAATTGCCCTAAGACTGTCCCAGCTCTCGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 90 bp CGACCCAGATGGGCTCAGCCTCCCCGGGGGCCACACACATCTTCTTaGTCACATGGCGTTTGCCAGGATGCCCAACAAACTGGATGCCCT +
Preference number: 1 (lower is better)
Translates to: RPRWAQPPRGPHTSS*SHGVCQDAQQTGCP
Trigger: AGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGGGGAGGCTGAGCCCATCTGGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CGGAATTCACCCATGGAGCCCCAGCCGGTGGAAAAGCCAATGAACTaGACCTCTGGTGGCCTCGGGAGGGTCCAGGCCACAATGACAGAC +
Preference number: 1 (lower is better)
Translates to: RNSPMEPQPVEKPMN*TSGGLGRVQATMTD
Trigger: GTCTGTCATTGTGGCCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATTGGCTTTTCCACCGGCTGGGGCTCCATGGGTGAATTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CCGTGGGGAGGCTGGGGATCGCTGCTGTCTGCAGAACCTTCTGGTTaGTCCTGTGCAGCTCGAAGGTTTCCTGGTAGTCCAGGTTGGTGG +
Preference number: 1 (lower is better)
Translates to: PWGGWGSLLSAEPSG*SCAARRFPGSPGWW
Trigger: CCACCAACCTGGACTACCAGGAAACCTTCGAGCTGCACAGGACCAACCAGAAGGTTCTGCAGACAGCAGCGATCCCCAGCCTCCCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CACCTCCAGCATCACCTTGTATTCCTGGTGATGCTGATCGGCCGCTaGGTCATCATCGTCAGCTGGGGGCCAGTCTCCTCGGGAACCCTC +
Preference number: 1 (lower is better)
Translates to: HLQHHLVFLVMLIGR*VIIVSWGPVSSGTL
Trigger: GAGGGTTCCCGAGGAGACTGGCCCCCAGCTGACGATGATGACCCAGCGGCCGATCAGCATCACCAGGAATACAAGGTGATGCTGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 90 bp ATCTCACAGGCAGCGAGGGGCCTCCGTGCTGGCAGAGATCAGGGCTaGGCGGTGTTGGCTGAAATAAATACCACCCCGGAGAAGATGGGC +
Preference number: 1 (lower is better)
Translates to: ISQAARGLRAGRDQG*AVLAEINTTPEKMG
Trigger: GCCCATCTTCTCCGGGGTGGTATTTATTTCAGCCAACACCGCTCAGCCCTGATCTCTGCCAGCACGGAGGCCCCTCGCTGCCTGTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 90 bp CAGCCTCCCCGGGGGCCACACACATCTTCTTGGTCACATGGCGTTTaGCAGGATGCCCAACAAACTGGATGCCCTTGGGAACCGAGAGCT +
Preference number: 1 (lower is better)
Translates to: QPPRGPHTSSWSHGV*QDAQQTGCPWEPRA
Trigger: AGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGGGGAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 90 bp CCCCGATGGGGACCCTCCTGTCGGCGTGATTCTCCTCAGGGTGTTTaGTGGACCTCCCATCCCGGCAGCAATTTGTGTCTCCGTAAGCAA +
Preference number: 1 (lower is better)
Translates to: PRWGPSCRRDSPQGV*WTSHPGSNLCLRKQ
Trigger: TTGCTTACGGAGACACAAATTGCTGCCGGGATGGGAGGTCCAGCAAACACCCTGAGGAGAATCACGCCGACAGGAGGGTCCCCATCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp ATGGGCTCAGCCTCCCCGGGGGCCACACACATCTTCTTGGTCACATaGCGTTTGCCAGGATGCCCAACAAACTGGATGCCCTTGGGAACC +
Preference number: 1 (lower is better)
Translates to: MGSASPGATHIFLVT*RLPGCPTNWMPLGT
Trigger: GGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGGGGAGGCTGAGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CGATGGGGACCCTCCTGTCGGCGTGATTCTCCTCAGGGTGTTTGCTaGACCTCCCATCCCGGCAGCAATTTGTGTCTCCGTAAGCAAGGG +
Preference number: 1 (lower is better)
Translates to: RWGPSCRRDSPQGVC*TSHPGSNLCLRKQG
Trigger: CCCTTGCTTACGGAGACACAAATTGCTGCCGGGATGGGAGGTCCAGCAAACACCCTGAGGAGAATCACGCCGACAGGAGGGTCCCCATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CATGGAGCCCCAGCCGGTGGAAAAGCCAATGAACTGGACCTCTGGTaGCCTCGGGAGGGTCCAGGCCACAATGACAGACTCATTGGATGG +
Preference number: 1 (lower is better)
Translates to: HGAPAGGKANELDLW*PREGPGHNDRLIGW
Trigger: CCATCCAATGAGTCTGTCATTGTGGCCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATTGGCTTTTCCACCGGCTGGGGCTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp ACCCATGGAGCCCCAGCCGGTGGAAAAGCCAATGAACTGGACCTCTaGTGGCCTCGGGAGGGTCCAGGCCACAATGACAGACTCATTGGA +
Preference number: 1 (lower is better)
Translates to: THGAPAGGKANELDL*WPREGPGHNDRLIG
Trigger: TCCAATGAGTCTGTCATTGTGGCCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATTGGCTTTTCCACCGGCTGGGGCTCCATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp TCCCTGGGCCTCAGGCTCCTGGAGGCTTACGAGCAGCTGGAAAGCTaGCTTGGCCACCGGGTCAGGCACATTGTAGGTGACATCAATCTG +
Preference number: 1 (lower is better)
Translates to: SLGLRLLEAYEQLES*LGHRVRHIVGDINL
Trigger: CAGATTGATGTCACCTACAATGTGCCTGACCCGGTGGCCAAGCCAGCTTTCCAGCTGCTCGTAAGCCTCCAGGAGCCTGAGGCCCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 90 bp CCACACGGGCATCATTGTGAGCTCGCACAGCCACATCAAAGCGGGTaGGGCGCAGTGGCCGCTGCACATACTGGAACTCATACTTGTTGG +
Preference number: 1 (lower is better)
Translates to: PHGHHCELAQPHQSG*GAVAAAHTGTHTCW
Trigger: CCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGCTTTGATGTGGCTGTGCGAGCTCACAATGATGCCCGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp GCTCAGATGTTGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTaGACCCGCATGAGTGTCTTTCACTCAACCGGCAAAGTCAGCGCA +
Preference number: 1 (lower is better)
Translates to: AQMLVSGLPISPEAL*TRMSVFHSTGKVSA
Trigger: TGCGCTGACTTTGCCGGTTGAGTGAAAGACACTCATGCGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR TCA 90 bp GTCACTGAAGCTCAAGAATGTGCCCTTGTCCACGTCCCAGGAATTTaGCAGGCTCCAGTGGGTGACCCCATCTCGCATGATGGCCAGGCT +
Preference number: 1 (lower is better)
Translates to: VTEAQECALVHVPGI*QAPVGDPISHDGQA
Trigger: AGCCTGGCCATCATGCGAGATGGGGTCACCCACTGGAGCCTGTCAAATTCCTGGGACGTGGACAAGGGCACATTCTTGAGCTTCAGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 90 bp CCGGGGGCCACACACATCTTCTTGGTCACATGGCGTTTGCCAGGATaGCCAACAAACTGGATGCCCTTGGGAACCGAGAGCTTCATGTAC +
Preference number: 1 (lower is better)
Translates to: PGATHIFLVTWRLPG*PTNWMPLGTESFMY
Trigger: GTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp TGGTCACATGGCGTTTGCCAGGATGCCCAACAAACTGGATGCCCTTaGGAACCGAGAGCTTCATGTACACCTCAGCGCAGGTGCCCATGT +
Preference number: 1 (lower is better)
Translates to: WSHGVCQDAQQTGCP*EPRASCTPQRRCPC
Trigger: ACATGGGCACCTGCGCTGAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 90 bp TCTTCTTGGTCACATGGCGTTTGCCAGGATGCCCAACAAACTGGATaGCCTTGGGAACCGAGAGCTTCATGTACACCTCAGCGCAGGTGC +
Preference number: 1 (lower is better)
Translates to: SSWSHGVCQDAQQTG*PWEPRASCTPQRRC
Trigger: GCACCTGCGCTGAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp ATCATTGTGAGCTCGCACAGCCACATCAAAGCGGGTGAGGCGCAGTaGCCGCTGCACATACTGGAACTCATACTTGTTGGGGGTGGAGAT +
Preference number: 1 (lower is better)
Translates to: IIVSSHSHIKAGEAQ*PLHILELILVGGGD
Trigger: ATCTCCACCCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGCTTTGATGTGGCTGTGCGAGCTCACAATGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 90 bp TGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTGGACCCGCATaGGTGTCTTTCACTCAACCGGCAAAGTCAGCGCAGAAAAGAAAT +
Preference number: 1 (lower is better)
Translates to: WYQACPSHRRLSGPA*VSFTQPAKSAQKRN
Trigger: ATTTCTTTTCTGCGCTGACTTTGCCGGTTGAGTGAAAGACACTCATGCGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR TCA 90 bp TCATTCTGTTCCTTGGGTTCATTTAGAGGCAGGTGTCACCTGGGCTaGGGTCTGCCCACCCACCATACAGAGTCACAGGCTGATAGGGAC +
Preference number: 1 (lower is better)
Translates to: SFCSLGSFRGRCHLG*GLPTHHTESQADRD
Trigger: GTCCCTATCAGCCTGTGACTCTGTATGGTGGGTGGGCAGACCTCAGCCCAGGTGACACCTGCCTCTAAATGAACCCAAGGAACAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 90 bp CACATCTTCTTGGTCACATGGCGTTTGCCAGGATGCCCAACAAACTaGATGCCCTTGGGAACCGAGAGCTTCATGTACACCTCAGCGCAG +
Preference number: 1 (lower is better)
Translates to: HIFLVTWRLPGCPTN*MPLGTESFMYTSAQ
Trigger: CTGCGCTGAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 90 bp CTCTGTCATTCTGTTCCTTGGGTTCATTTAGAGGCAGGTGTCACCTaGGCTGAGGTCTGCCCACCCACCATACAGAGTCACAGGCTGATA +
Preference number: 1 (lower is better)
Translates to: LCHSVPWVHLEAGVT*AEVCPPTIQSHRLI
Trigger: TATCAGCCTGTGACTCTGTATGGTGGGTGGGCAGACCTCAGCCCAGGTGACACCTGCCTCTAAATGAACCCAAGGAACAGAATGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTaGGTGTGTGGGTATGAATGGTCCCCAGGACCAAACTGCGGTCCC +
Preference number: 1 (lower is better)
Translates to: DHLPEFSEMLTTGTS*VCGYEWSPGPNCGP
Trigger: GGGACCGCAGTTTGGTCCTGGGGACCATTCATACCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388925.8
ENST00000443236.7
ENST00000594249.5
ENST00000651564.1
3UTR CCA 90 bp ATCGTGTTTGCTCAGAAAGAGGCTTTTGGCCACACGAGTGCTTTCTaGGAATGTTTCTTCTCCCGGGAACAGAATGTCAGGCTGTGGGAG +
Preference number: 1 (lower is better)
Translates to: IVFAQKEAFGHTSAF*ECFFSREQNVRLWE
Trigger: CTCCCACAGCCTGACATTCTGTTCCCGGGAGAAGAAACATTCCCAGAAAGCACTCGTGTGGCCAAAAGCCTCTTTCTGAGCAAACACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 90 bp AACTGCGGTCCCACAACTGCATGTGGTTGTAGGATTATCTCAAGGTaGAGGTGTTTGACATCCATAAACCCTCCTCCCCACCACTCTGAA +
Preference number: 1 (lower is better)
Translates to: NCGPTTACGCRIISR*RCLTSINPPPHHSE
Trigger: TTCAGAGTGGTGGGGAGGAGGGTTTATGGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGCAGTTGTGGGACCGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388925.8
ENST00000594249.5
3UTR GCA 90 bp AGTCCACATCGTGTTTGCTCAGAAAGAGGCTTTTGGCCACACGAGTaGTTTCTGGGAATGTTTCTTCTCCCGGGAACAGAATGTCAGGCT +
Preference number: 1 (lower is better)
Translates to: SPHRVCSERGFWPHE*FLGMFLLPGTECQA
Trigger: AGCCTGACATTCTGTTCCCGGGAGAAGAAACATTCCCAGAAAGCACTCGTGTGGCCAAAAGCCTCTTTCTGAGCAAACACGATGTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 90 bp CACAAAGCCCTTGCATTTCATATTTCACAGGCAAACGTCCAAATGTaGAGCGGGACTCAAGGCTGGCTTCATGGCTTGAAGTTTTGTGTG +
Preference number: 1 (lower is better)
Translates to: HKALAFHISQANVQM*SGTQGWLHGLKFCV
Trigger: CACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGCCTGTGAAATATGAAATGCAAGGGCTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR CCA 90 bp ACAGGCAAACGTCCAAATGTGCAGCGGGACTCAAGGCTGGCTTCATaGCTTGAAGTTTTGTGTGTTAGAAAAAGATGCACAGTGTCTTGC +
Preference number: 1 (lower is better)
Translates to: TGKRPNVQRDSRLAS*LEVLCVRKRCTVSC
Trigger: GCAAGACACTGTGCATCTTTTTCTAACACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR GCA 90 bp TCAAGGCTGGCTTCATGGCTTGAAGTTTTGTGTGTTAGAAAAAGATaGACAGTGTCTTGCTCAGATGTTGGTATCAGGCCTGCCCATCTC +
Preference number: 1 (lower is better)
Translates to: SRLASWLEVLCVRKR*TVSCSDVGIRPAHL
Trigger: GAGATGGGCAGGCCTGATACCAACATCTGAGCAAGACACTGTGCATCTTTTTCTAACACACAAAACTTCAAGCCATGAAGCCAGCCTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR CCA 90 bp CATATTTCACAGGCAAACGTCCAAATGTGCAGCGGGACTCAAGGCTaGCTTCATGGCTTGAAGTTTTGTGTGTTAGAAAAAGATGCACAG +
Preference number: 1 (lower is better)
Translates to: HISQANVQMCSGTQG*LHGLKFCVLEKDAQ
Trigger: CTGTGCATCTTTTTCTAACACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGCCTGTGAAATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR GCA 90 bp GGGGCGCGCTCCACTTCGTTGCACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTACGGAGCTTGCGCAGTaGCTCAGGGGCTGCCGGGCT +
Preference number: 2 (lower is better)
Translates to: GARSTSLHAGPAHSSRASTELAQ*LRGCRA
Trigger: AGCCCGGCAGCCCCTGAGGCACTGCGCAAGCTCCGT...ACTCGCCCGGGAACTGTGCGCCGGACCCGCGTGCAACGAAGTGGAGCGCGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp AGGCGCTGGCGTAGACCACCCCGTCGGAGCCGCACACCGGGTTCCCCTGGGCGCGTGGGCTGTGGGTGCTaGCGTTGTAGAAGCGAGTGG +
Preference number: 2 (lower is better)
Translates to: RRWRRPPRRSRTPGSPGRVGCGC*RCRSEW
Trigger: CCACTCGCTTCTACAACGTCAGCACCCACAGCCCAC...GCGCCCAGGGGAACCCGGTGTGCGGCTCCGACGGGGTGGTCTACGCCAGCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp AGGCGCTGGCGTAGACCACCCCGTCGGAGCCGCACACCGGGTTCCCCTGGGCGCTCGGCCTGCTGCTGCTaGATGATCCAGCTCTTGGCG +
Preference number: 2 (lower is better)
Translates to: RRWRRPPRRSRTPGSPGRSACCC*MIQLLA
Trigger: CGCCAAGAGCTGGATCATCCAGCAGCAGCAGGCCGA...GCGCCCAGGGGAACCCGGTGTGCGGCTCCGACGGGGTGGTCTACGCCAGCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp TCTGAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTGGCGCTCTGGGTGCCCACATCAAAGCGGGTaGGGCGCAGTGGCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: SEGPESGPICGTGWRSGCPHQSG*GAVAAA
Trigger: TGCAGCGGCCACTGCGCCTCACCCGCTTTGATGTGG...GCACCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp TCTGAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTGGCGCTCTGGGTGCGAGGGGCCTCCGTGCTaGCAGAGATCAGGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: SEGPESGPICGTGWRSGCEGPPC*QRSGLS
Trigger: GCTCAGCCCTGATCTCTGCCAGCACGGAGGCCCCTC...GCACCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR TCA 90 bp GTCTCTGAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTGGCGCTCTGGGCCATCACACTGCGCCTaGCGTGATCCACCCCGATGG +
Preference number: 2 (lower is better)
Translates to: VSEGPESGPICGTGWRSGPSHCA*RDPPRW
Trigger: CCATCGGGGTGGATCACGTCAGGCGCAGTGTGATGG...CCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTCAGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp GGGGCGCGCTCCACTTCGTTGCACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTCCATCGGCCTGCTGCTaGTGGATGATCCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: GARSTSLHAGPAHSSRASPSACC*WMIQLL
Trigger: CAAGAGCTGGATCATCCAGCAGCAGCAGGCCGATGG...ACTCGCCCGGGAACTGTGCGCCGGACCCGCGTGCAACGAAGTGGAGCGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp GGCTCAGAAGCCCTGGCCTGTGGGCCCCCACCACCCGGCCACTATGTCTCTGAGCCAGGCTACGGAGCTTaGGCAGTGCCTCAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GSEALACGPPPPGHYVSEPGYGA*AVPQGL
Trigger: CAGCCCCTGAGGCACTGCGCAAGCTCCGTAGCCTGG...CTCAGAGACATAGTGGCCGGGTGGTGGGGGCCCACAGGCCAGGGCTTCTGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp CACAGGCAGCGAGGGGCCTCCGTGCTGGCAGAGATCAGGGCTGAGCGGTGTTGGAGGTGTCACCTGGGCTaGGGTCTGCCCACCCACCAT +
Preference number: 2 (lower is better)
Translates to: HRQRGASVLAEIRAERCWRCHLG*GLPTHH
Trigger: ATGGTGGGTGGGCAGACCTCAGCCCAGGTGACACCT...CCAACACCGCTCAGCCCTGATCTCTGCCAGCACGGAGGCCCCTCGCTGCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR GCA 90 bp GGGGCGCGCTCCACTTCGTTGCACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTGCAGACTCCAGGAAGTaGCTCGCTTTGTCAGTGGAG +
Preference number: 2 (lower is better)
Translates to: GARSTSLHAGPAHSSRASADSRK*LALSVE
Trigger: CTCCACTGACAAAGCGAGGCACTTCCTGGAGTCTGC...ACTCGCCCGGGAACTGTGCGCCGGACCCGCGTGCAACGAAGTGGAGCGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp GGCTCAGAAGCCCTGGCCTGTGGGCCCCCACCACCCGGCCACTATGTCTCTGAGGCGGGTGAGGCGCAGTaGCCGCTGCACATACTGGAA +
Preference number: 2 (lower is better)
Translates to: GSEALACGPPPPGHYVSEAGEAQ*PLHILE
Trigger: TTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGC...CTCAGAGACATAGTGGCCGGGTGGTGGGGGCCCACAGGCCAGGGCTTCTGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp AGTAGTCGTACACGGAGACTGGCAGCGCCGACGTCCTGCCCACCACGCACTCCCGAACTGGACCTCTGGTaGCCTCGGGAGGGTCCAGGC +
Preference number: 2 (lower is better)
Translates to: SSRTRRLAAPTSCPPRTPELDLW*PREGPG
Trigger: GCCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTC...GGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGCCAGTCTCCGTGTACGACTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp AGGTTCCCGCTGCTCACAGGAGGCCGAGGCCCGGCTGTGACCCTGGAGATGAGGGGCAATTTGGGGTCCTaGGTGCCCCAAAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: RFPLLTGGRGPAVTLEMRGNLGS*VPQREA
Trigger: GGCCTCCCTTTGGGGCACCCAGGACCCCAAATTGCC...CCTCATCTCCAGGGTCACAGCCGGGCCTCGGCCTCCTGTGAGCAGCGGGAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR TCA 90 bp AGGTTCCCGCTGCTCACAGGAGGCCGAGGCCCGGCTGTGACCCTGGAGATGAGGATCAGGAACTCACGGTaGGGAAGCACCGGGGTCACC +
Preference number: 2 (lower is better)
Translates to: RFPLLTGGRGPAVTLEMRIRNSR*GSTGVT
Trigger: GGTGACCCCGGTGCTTCCTCACCGTGAGTTCCTGAT...CCTCATCTCCAGGGTCACAGCCGGGCCTCGGCCTCCTGTGAGCAGCGGGAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR GCA 90 bp GGGGCGCGCTCCACTTCGTTGCACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTACACCTCAGCGCAGGTaGCCATGTAGTTGTAGACAC +
Preference number: 2 (lower is better)
Translates to: GARSTSLHAGPAHSSRASTPQRR*PCSCRH
Trigger: GTGTCTACAACTACATGGGCACCTGCGCTGAGGTGT...ACTCGCCCGGGAACTGTGCGCCGGACCCGCGTGCAACGAAGTGGAGCGCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp TCTGAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTGGCGCTCTGGGTGCCGGGCTCTCCCATCTTaGTGGTGGAGATCCATGACC +
Preference number: 2 (lower is better)
Translates to: SEGPESGPICGTGWRSGCRALPS*WWRSMT
Trigger: GGTCATGGATCTCCACCAGCAAGATGGGAGAGCCCG...GCACCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp GGCGTCCCTGGGCCTCAGGCTCCTGGAGGCTTACGAGCAGCTGGAAAGCTGGCTCCGGGACCTTCACACTaGGTGTCCCCTCACCAGATG +
Preference number: 2 (lower is better)
Translates to: GVPGPQAPGGLRAAGKLAPGPSH*VSPHQM
Trigger: CATCTGGTGAGGGGACACTCAGTGTGAAGGTCCCGG...AGCCAGCTTTCCAGCTGCTCGTAAGCCTCCAGGAGCCTGAGGCCCAGGGACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp CTCTTGGCGGCAGCCAGCTCCCGGGGGTCCACGAAGATAAAGCTGCGAGCCTGTGCCGCAGGAGGTTGTTaGGGTGGTTCAGGGTTGGCC +
Preference number: 2 (lower is better)
Translates to: LLAAASSRGSTKIKLRACAAGGC*GGSGLA
Trigger: GGCCAACCCTGAACCACCTCAACAACCTCCTGCGGC...ACAGGCTCGCAGCTTTATCTTCGTGGACCCCCGGGAGCTGGCTGCCGCCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp GGAGCTCCAGCTGTAGCTAGGAAGGTGGGGGATCTCCCAAGGGACCTCCAGCTGCACACCGGTGACTGCTaGGCCCACACCTGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: GAPAVARKVGDLPRDLQLHTGDC*AHTWVP
Trigger: TGGGACCCAGGTGTGGGCTCAGCAGTCACCGGTGTG...CAGCTGGAGGTCCCTTGGGAGATCCCCCACCTTCCTAGCTACAGCTGGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000594249.5
ENST00000598792.1
3UTR-3UTR GCA 90 bp CACAGGCAGCGAGGGGCCTCCGTGCTGGCAGAGATCAGGGCTGAGCGGTGTTGGTTGCTGAGAGCCATCTaGTTCCCCGCAGGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: HRQRGASVLAEIRAERCWLLRAI*FPAGPC
Trigger: ACAAGGCCCTGCGGGGAAGCAGATGGCTCTCAGCAA...CCAACACCGCTCAGCCCTGATCTCTGCCAGCACGGAGGCCCCTCGCTGCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CCA 90 bp GGGGCGCGCTCCACTTCGTTGCACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTATCTTCTTGGTCACATaGCGTTTGCCAGGATGCCCA +
Preference number: 2 (lower is better)
Translates to: GARSTSLHAGPAHSSRASIFLVT*RLPGCP
Trigger: TGGGCATCCTGGCAAACGCCATGTGACCAAGAAGAT...ACTCGCCCGGGAACTGTGCGCCGGACCCGCGTGCAACGAAGTGGAGCGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp CTCTTGGCGGCAGCCAGCTCCCGGGGGTCCACGAAGATAAAGCTGCGAGCCTGTCCTCAGGGTGTTTGCTaGACCTCCCATCCCGGCAGC +
Preference number: 2 (lower is better)
Translates to: LLAAASSRGSTKIKLRACPQGVC*TSHPGS
Trigger: GCTGCCGGGATGGGAGGTCCAGCAAACACCCTGAGG...ACAGGCTCGCAGCTTTATCTTCGTGGACCCCCGGGAGCTGGCTGCCGCCAAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp AGGTTCCCGCTGCTCACAGGAGGCCGAGGCCCGGCTGTGACCCTGGAGATGAGGCAGGATGCAGCCAGATaGTGTCGTCCTGCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: RFPLLTGGRGPAVTLEMRQDAAR*CRPALS
Trigger: GCTGAGAGCAGGACGACACCATCTGGCTGCATCCTG...CCTCATCTCCAGGGTCACAGCCGGGCCTCGGCCTCCTGTGAGCAGCGGGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR TCA 90 bp AGGTGCCAGGGGTCACAAAGGGGAATCAAAGTCTGCTGGTACTGGTGGCAGGCACAGGGCCTTGTGATGTaGGCCCGAGGTCCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: RCQGSQRGIKVCWYWWQAQGLVM*ARGPRG
Trigger: CCCCCGGGGACCTCGGGCTCACATCACAAGGCCCTG...TGCCTGCCACCAGTACCAGCAGACTTTGATTCCCCTTTGTGACCCCTGGCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR GCA 90 bp AGGCGCTGGCGTAGACCACCCCGTCGGAGCCGCACACCGGGTTCCCCTGGGCGCCTGATGTTGAGACAATaGCAAATCCATGTTTCGGGG +
Preference number: 2 (lower is better)
Translates to: RRWRRPPRRSRTPGSPGRLMLRQ*QIHVSG
Trigger: CCCCGAAACATGGATTTGGCATTGTCTCAACATCAG...GCGCCCAGGGGAACCCGGTGTGCGGCTCCGACGGGGTGGTCTACGCCAGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp CTGGGTCATCATCGTCAGCTGGGGGCCAGTCTCCTCGGGAACCCTCAGCTGCGGGAGGCTGGGGATCGCTaGTGTCTGCAGAACCTTCTG +
Preference number: 2 (lower is better)
Translates to: LGHHRQLGASLLGNPQLREAGDR*CLQNLL
Trigger: CAGAAGGTTCTGCAGACAGCAGCGATCCCCAGCCTC...CCGCAGCTGAGGGTTCCCGAGGAGACTGGCCCCCAGCTGACGATGATGACCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCAAGGGATGGCGCCGTGTaGGACCCCCAGGGTGAAGGC +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLARDGAV*DPQGEG
Trigger: GCCTTCACCCTGGGGGTCCCACACGGCGCCATCCCT...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp GGCTCAGAAGCCCTGGCCTGTGGGCCCCCACCACCCGGCCACTATGTCTCTGAGGCAGAACCTTCTGGTTaGTCCTGTGCAGCTCGAAGG +
Preference number: 2 (lower is better)
Translates to: GSEALACGPPPPGHYVSEAEPSG*SCAARR
Trigger: CCTTCGAGCTGCACAGGACCAACCAGAAGGTTCTGC...CTCAGAGACATAGTGGCCGGGTGGTGGGGGCCCACAGGCCAGGGCTTCTGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 90 bp TCTGCCCGGAAGCCTGACAGCAGGGGCACCTCCAGGACAGCCATATaGGAAGACCCTGCATGCAGCCACCTGGTGCACACCTCCAGCATC +
Preference number: 2 (lower is better)
Translates to: SARKPDSRGTSRTAI*EDPACSHLVHTSSI
Trigger: GATGCTGGAGGTGTGCACCAGGTGGCTGCATGCAGGGTCTTCCAATATGGCTGTCCTGGAGGTGCCCCTGCTGTCAGGCTTCCGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp AGTAGTCGTACACGGAGACTGGCAGCGCCGACGTCCTGCCCACCACGCACTCCCACACGGGCATCATTGTaGGCTCGCACAGCCACATCA +
Preference number: 2 (lower is better)
Translates to: SSRTRRLAAPTSCPPRTPTRASL*ARTATS
Trigger: TGATGTGGCTGTGCGAGCTCACAATGATGCCCGTGT...GGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGCCAGTCTCCGTGTACGACTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCAGTGGGACCCCCAGGGTaGAGGCCTCGCTGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLAVGPPG*RPRCSS
Trigger: AGAGCTACAGCGAGGCCTTCACCCTGGGGGTCCCAC...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp GAATGTTTCTTCTCCCGGGAACAGAATGTCAGGCTGTGGGAGCTGCCGTGGCCCCACACCGGTGACTGCTaGGCCCACACCTGGGTCCCA +
Preference number: 2 (lower is better)
Translates to: ECFFSREQNVRLWELPWPHTGDC*AHTWVP
Trigger: TGGGACCCAGGTGTGGGCTCAGCAGTCACCGGTGTG...GGGCCACGGCAGCTCCCACAGCCTGACATTCTGTTCCCGGGAGAAGAAACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594249.5
ENST00000598792.1
3UTR-3UTR GCA 90 bp GAAGGGCGTAGGCTGTCATTTCCACCTCGGCCGAGACCACTGACTGAGAGACCCCCTGGAAGGAGCCACTaGCACCAGGCTCCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: EGRRLSFPPRPRPLTERPPGRSH*HQAPCV
Trigger: CACACAGGGAGCCTGGTGGCAGTGGCTCCTTCCAGG...GGGTCTCTCAGTCAGTGGTCTCGGCCGAGGTGGAAATGACAGCCTACGCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCAGGGAGGGCTCGGCGATaGCTAAGCCCTGAGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLAGRARR*LSPERW
Trigger: CCACCTCTCAGGGCTTAGGCATCGCCGAGCCCTCCC...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp GTCTCTGAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTGGCGCTCTGGGGGAACTCATACTTGTTaGGGGTGGAGATGTGGACTC +
Preference number: 2 (lower is better)
Translates to: VSEGPESGPICGTGWRSGGTHTC*GWRCGL
Trigger: GAGTCCACATCTCCACCCCCAACAAGTATGAGTTCC...CCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTCAGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp AGGTGCCAGGGGTCACAAAGGGGAATCAAAGTCTGCTGGTACTGGTGGCAGGCAAAGGCAGGCAGGTTCTaGGCCTGGGGGCCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: RCQGSQRGIKVCWYWWQAKAGRF*AWGPWE
Trigger: CTCCCAGGGCCCCCAGGCCCAGAACCTGCCTGCCTT...TGCCTGCCACCAGTACCAGCAGACTTTGATTCCCCTTTGTGACCCCTGGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CAA 90 bp ACGACCCAGATGGGCTCAGCCTCCCCGGGGGCCACACACATCTTCTaGGTCACATGGCGTTTGCCAGGATGCCCAACAAACTGGATGCCC +
Preference number: 2 (lower is better)
Translates to: TTQMGSASPGATHIF*VTWRLPGCPTNWMP
Trigger: GGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGGGGAGGCTGAGCCCATCTGGGTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 90 bp ACCTCTGGTGGCCTCGGGAGGGTCCAGGCCACAATGACAGACTCATaGGATGGCTCTGGACCATGGCCAACCTGGATAAGGCCACCACGC +
Preference number: 2 (lower is better)
Translates to: TSGGLGRVQATMTDS*DGSGPWPTWIRPPR
Trigger: GCGTGGTGGCCTTATCCAGGTTGGCCATGGTCCAGAGCCATCCAATGAGTCTGTCATTGTGGCCTGGACCCTCCCGAGGCCACCAGAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp AGGAGGTTGTTGAGGTGGTTCAGGGTTGGCCCCATGACGTCCCCGATGATGGAGCACCCACCCAGCTGGTaGTGGAGTCCGGGACCTTCA +
Preference number: 2 (lower is better)
Translates to: RRLLRWFRVGPMTSPMMEHPPSW*WSPGPS
Trigger: TGAAGGTCCCGGACTCCATCACCAGCTGGGTGGGTG...CTCCATCATCGGGGACGTCATGGGGCCAACCCTGAACCACCTCAACAACCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp GAAGGGCGTAGGCTGTCATTTCCACCTCGGCCGAGACCACTGACTGAGAGACCCGGACGATCTCGATCATaGCTGCTGTGTCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: EGRRLSFPPRPRPLTERPGRSRS*LLCPGA
Trigger: GGCCCCAGGACACAGCAGGCATGATCGAGATCGTCC...GGGTCTCTCAGTCAGTGGTCTCGGCCGAGGTGGAAATGACAGCCTACGCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCACTGTCAGCGGGACAGTaGCGTGGATCCCACCCTGGA +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLALSAGQ*RGSHPG
Trigger: TCCAGGGTGGGATCCACGGCACTGTCCCGCTGACAG...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp AGAGGGTGCGAGAGCTGGGACAGTCTTAGGGCAATTTGGGGTCCTGGGTGCCCCACCTGGGCTGAGGTCTaGCCACCCACCATACAGAGT +
Preference number: 2 (lower is better)
Translates to: RGCESWDSLRAIWGPGCPTWAEV*PPTIQS
Trigger: ACTCTGTATGGTGGGTGGGCAGACCTCAGCCCAGGT...GGGGCACCCAGGACCCCAAATTGCCCTAAGACTGTCCCAGCTCTCGCACCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CCA 90 bp GGCGTCCCTGGGCCTCAGGCTCCTGGAGGCTTACGAGCAGCTGGAAAGCTGGCTCTCATTGGATGGCTCTaGACCATGGCCAACCTGGAT +
Preference number: 2 (lower is better)
Translates to: GVPGPQAPGGLRAAGKLALIGWL*TMANLD
Trigger: ATCCAGGTTGGCCATGGTCCAGAGCCATCCAATGAG...AGCCAGCTTTCCAGCTGCTCGTAAGCCTCCAGGAGCCTGAGGCCCAGGGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp GGGTCATCATCGTCAGCTGGGGGCCAGTCTCCTCGGGAACCCTCAGCTGCGGAGGTACTAGGTAGTCGGTaGTCTCTCTCTCCACCTCAG +
Preference number: 2 (lower is better)
Translates to: GSSSSAGGQSPREPSAAEVLGSR*SLSPPQ
Trigger: CTGAGGTGGAGAGAGAGACCACCGACTACCTAGTAC...CTCCGCAGCTGAGGGTTCCCGAGGAGACTGGCCCCCAGCTGACGATGATGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp ATGAGGTTTTATCTTACAACATCCTCTACAGCAAGTGGGCACGGGGCCTCGGGCGTAGGGTGCCAGGGGTaGGGAACCCACCGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: MRFYLTTSSTASGHGASGVGCQG*GTHRPG
Trigger: CCCTGGCCGGTGGGTTCCCCACCCCTGGCACCCTAC...GCCCGAGGCCCCGTGCCCACTTGCTGTAGAGGATGTTGTAAGATAAAACCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CAA 90 bp TCAGCCTCCCCGGGGGCCACACACATCTTCTTGGTCACATGGCGTTaGCCAGGATGCCCAACAAACTGGATGCCCTTGGGAACCGAGAGC +
Preference number: 2 (lower is better)
Translates to: SASPGATHIFLVTWR*PGCPTNWMPLGTES
Trigger: GCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGGGGAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp GCCCCAAAGGGAGGCCGGGGCTTTGTGTTTCAGAGAAACGCAGCCTGTTCCGTTGTGGCCCCAGGAAAATaGTGCCCAGCTCCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: APKGGRGFVFQRNAACSVVAPGK*CPAPRL
Trigger: CAGCCTTGGAGCTGGGCATCATTTTCCTGGGGCCAC...AACGGAACAGGCTGCGTTTCTCTGAAACACAAAGCCCCGGCCTCCCTTTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR GCA 90 bp ACTGGGACAGAAGAATGCGCTGTAGGTGTACGCCCGGGGGACTCCTTCCGCCTCAGCGGGATCTTGACCTaGTCCCCACGGATGATGAGA +
Preference number: 2 (lower is better)
Translates to: TGTEECAVGVRPGDSFRLSGILT*SPRMMR
Trigger: TCTCATCATCCGTGGGGAGCAGGTCAAGATCCCGCT...GAGGCGGAAGGAGTCCCCCGGGCGTACACCTACAGCGCATTCTTCTGTCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp CTGGGTCATCATCGTCAGCTGGGGGCCAGTCTCCTCGGGAACCCTCAGCTGCGGTGGTCACATGGCGTTTaGCAGGATGCCCAACAAACT +
Preference number: 2 (lower is better)
Translates to: LGHHRQLGASLLGNPQLRWSHGV*QDAQQT
Trigger: AGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCA...CCGCAGCTGAGGGTTCCCGAGGAGACTGGCCCCCAGCTGACGATGATGACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCATCTCCTCAGGGTGTTTaGTGGACCTCCCATCCCGGC +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLASPQGV*WTSHPG
Trigger: GCCGGGATGGGAGGTCCAGCAAACACCCTGAGGAGA...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp CCATCTGTGGAACGGGCTGGCGCTCTGGGTGCTGCTTTCCAGGTTCCCGCTGCTGGCCGCTGCACATACTaGAACTCATACTTGTTGGGG +
Preference number: 2 (lower is better)
Translates to: PSVERAGALGAAFQVPAAGRCTY*NSYLLG
Trigger: CCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCC...AGCAGCGGGAACCTGGAAAGCAGCACCCAGAGCGCCAGCCCGTTCCACAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCAATGCCTGCTGTGTCCTaGGGCCCAGAAGACAAGGCC +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLAMPAVS*GPEDKA
Trigger: GGCCTTGTCTTCTGGGCCCCAGGACACAGCAGGCAT...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp ATCTCACCGGAGGCTCTCTGGACCCGCATGAGTGTCTTTCACTCAACCGGCAAACCTGGAAGGAGCCACTaGCACCAGGCTCCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: ISPEALWTRMSVFHSTGKPGRSH*HQAPCV
Trigger: CACACAGGGAGCCTGGTGGCAGTGGCTCCTTCCAGG...TTTGCCGGTTGAGTGAAAGACACTCATGCGGGTCCAGAGAGCCTCCGGTGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR CCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCAAGCTATAAGGGTCCATaGCCAGGGGCGCAGCAGACT +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLASYKGP*PGAQQT
Trigger: AGTCTGCTGCGCCCCTGGCCATGGACCCTTATAGCT...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 90 bp CGCCAGCTGATCCAGAATGTTCTGAATTCATCCCAGGAGAGGATCTaGGCCGTGTGTGCACTGGCCACGGGCTCTCCCATCTTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: RQLIQNVLNSSQERI*AVCALATGSPILLV
Trigger: CACCAGCAAGATGGGAGAGCCCGTGGCCAGTGCACACACGGCCAAGATCCTCTCCTGGGATGAATTCAGAACATTCTGGATCAGCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp CTCTCGTCCACCTCCATCTTCCTCCAGATTCGGAATTCACCCATGGAGCCCCAGACCCTCCTGTCGGCGTaGTTCTCCTCAGGGTGTTTG +
Preference number: 2 (lower is better)
Translates to: LSSTSIFLQIRNSPMEPQTLLSA*FSSGCL
Trigger: CAAACACCCTGAGGAGAATCACGCCGACAGGAGGGT...CTGGGGCTCCATGGGTGAATTCCGAATCTGGAGGAAGATGGAGGTGGACGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCAGGGTCCAGGCCACAATaGCAGACTCATTGGATGGCT +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLAGSRPQ*QTHWMA
Trigger: AGCCATCCAATGAGTCTGTCATTGTGGCCTGGACCC...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCAAGGCGCAGTGGCCGCTaGACATACTGGAACTCATAC +
Preference number: 2 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLARRSGR*TYWNSY
Trigger: GTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCT...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp CCCACAACTGCATGTGGTTGTAGGATTATCTCAAGGTGCAGGTGTTTGACATCCTGGGGGCCCTGGGAGTaGGCTGGTCCTCTGGGCACG +
Preference number: 2 (lower is better)
Translates to: PTTACGCRIISRCRCLTSWGPWE*AGPLGT
Trigger: CGTGCCCAGAGGACCAGCCCACTCCCAGGGCCCCCA...GGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGCAGTTGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CAA 90 bp TTGGTCACATGGCGTTTGCCAGGATGCCCAACAAACTGGATGCCCTaGGGAACCGAGAGCTTCATGTACACCTCAGCGCAGGTGCCCATG +
Preference number: 2 (lower is better)
Translates to: LVTWRLPGCPTNWMP*GTESFMYTSAQVPM
Trigger: CATGGGCACCTGCGCTGAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp AGGGGTCACAAAGGGGAATCAAAGTCTGCTGGTACTGGTGGCAGGCAGCTGGTACAGCCTGTTCCGTTTTaGAGTTGCCCACCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: RGHKGESKSAGTGGRQLVQPVPF*SCPPAG
Trigger: TCCAGCCGGTGGGCAACTTCAAAACGGAACAGGCTG...TACCAGCTGCCTGCCACCAGTACCAGCAGACTTTGATTCCCCTTTGTGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR GCA 90 bp TCACTGAAGCTCAAGAATGTGCCCTTGTCCACGTCCCAGGAATTTGACAGGCTCCCTTGTTCAGGACCCTaGCCACGGCCAGGAAGGAGC +
Preference number: 2 (lower is better)
Translates to: SLKLKNVPLSTSQEFDRLPCSGP*PRPGRS
Trigger: GCTCCTTCCTGGCCGTGGGCAGGGTCCTGAACAAGG...GAGCCTGTCAAATTCCTGGGACGTGGACAAGGGCACATTCTTGAGCTTCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp CTGGGAATGTTTCTTCTCCCGGGAACAGAATGTCAGGCTGTGGGAGCTGCCGTGCTGATAGGGACAGGATaGAGCCAGATGGTGTCGTCC +
Preference number: 2 (lower is better)
Translates to: LGMFLLPGTECQAVGAAVLIGTG*SQMVSS
Trigger: GGACGACACCATCTGGCTGCATCCTGTCCCTATCAG...CACGGCAGCTCCCACAGCCTGACATTCTGTTCCCGGGAGAAGAAACATTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CAA 90 bp AAGCGGGTGAGGCGCAGTGGCCGCTGCACATACTGGAACTCATACTaGTTGGGGGTGGAGATGTGGACTCTCTCACTGGGACAGAAGAAT +
Preference number: 2 (lower is better)
Translates to: KRVRRSGRCTYWNSY*LGVEMWTLSLGQKN
Trigger: ATTCTTCTGTCCCAGTGAGAGAGTCCACATCTCCACCCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp GGAATGTTTCTTCTCCCGGGAACAGAATGTCAGGCTGTGGGAGCTGCCGTGGCCCACACGAGTGCTTTCTaGGAATGTTTCTTCTCCCGG +
Preference number: 2 (lower is better)
Translates to: GMFLLPGTECQAVGAAVAHTSAF*ECFFSR
Trigger: CCGGGAGAAGAAACATTCCCAGAAAGCACTCGTGTG...GGCCACGGCAGCTCCCACAGCCTGACATTCTGTTCCCGGGAGAAGAAACATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594249.5
ENST00000598792.1
3UTR-3UTR TCA 90 bp TCACTGAAGCTCAAGAATGTGCCCTTGTCCACGTCCCAGGAATTTGACAGGCTCGCTGGTGGAGATCCATaGCCTGGTGTTCTGATGCCC +
Preference number: 2 (lower is better)
Translates to: SLKLKNVPLSTSQEFDRLAGGDP*PGVLMP
Trigger: GGGCATCAGAACACCAGGTCATGGATCTCCACCAGC...GAGCCTGTCAAATTCCTGGGACGTGGACAAGGGCACATTCTTGAGCTTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp TCACTGAAGCTCAAGAATGTGCCCTTGTCCACGTCCCAGGAATTTGACAGGCTCTCAGGACAAAGGCTGTaGGCCACATGCTCCCCGATG +
Preference number: 2 (lower is better)
Translates to: SLKLKNVPLSTSQEFDRLSGQRL*ATCSPM
Trigger: CATCGGGGAGCATGTGGCTCACAGCCTTTGTCCTGA...GAGCCTGTCAAATTCCTGGGACGTGGACAAGGGCACATTCTTGAGCTTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp AGGGCTTTGGCCGTGATGTTGTTGAGTCCCAGGTCGCTGAAGGACAGAACGACCCAAACTGGATGCCCTTaGGAACCGAGAGCTTCATGT +
Preference number: 2 (lower is better)
Translates to: RALAVMLLSPRSLKDRTTQTGCP*EPRASC
Trigger: ACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTG...GGTCGTTCTGTCCTTCAGCGACCTGGGACTCAACAACATCACGGCCAAAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp CCCACAACTGCATGTGGTTGTAGGATTATCTCAAGGTGCAGGTGTTTGACATCCATCCTCTACAGCAAGTaGGCACGGGGCCTCGGGCTG +
Preference number: 2 (lower is better)
Translates to: PTTACGCRIISRCRCLTSILYSK*ARGLGL
Trigger: CAGCCCGAGGCCCCGTGCCCACTTGCTGTAGAGGAT...GGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGCAGTTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CCA 90 bp GAGGCACAAAGCCCTTGCATTTCATATTTCACAGGCAAACGTCCAAATGTGCAGACCAGGCTCCCTGTGTaGGGCTGGAAAGCGGGGACA +
Preference number: 2 (lower is better)
Translates to: EAQSPCISYFTGKRPNVQTRLPV*GWKAGT
Trigger: TGTCCCCGCTTTCCAGCCCCACACAGGGAGCCTGGT...CTGCACATTTGGACGTTTGCCTGTGAAATATGAAATGCAAGGGCTTTGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR CCA 90 bp CCCACAACTGCATGTGGTTGTAGGATTATCTCAAGGTGCAGGTGTTTGACATCCCCTGGTAGTCCAGGTTaGTGGAGGCCAGGGAGACAG +
Preference number: 2 (lower is better)
Translates to: PTTACGCRIISRCRCLTSPGSPG*WRPGRQ
Trigger: CTGTCTCCCTGGCCTCCACCAACCTGGACTACCAGG...GGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGCAGTTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp ATGAGGTTTTATCTTACAACATCCTCTACAGCAAGTGGGCACGGGGCCTCGGGCCCACCCCGGAGAAGATaGGCAAATGCAGACATAAGC +
Preference number: 2 (lower is better)
Translates to: MRFYLTTSSTASGHGASGPPRRR*ANADIS
Trigger: GCTTATGTCTGCATTTGCCCATCTTCTCCGGGGTGG...GCCCGAGGCCCCGTGCCCACTTGCTGTAGAGGATGTTGTAAGATAAAACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CCA 90 bp ATGGCCAACCTGGATAAGGCCACCACGCCAGCTGATCCAGAATGTTCTGAATTCCTCCCATCTTGCTGGTaGAGATCCATGACCTGGTGT +
Preference number: 2 (lower is better)
Translates to: MANLDKATTPADPECSEFLPSCW*RSMTWC
Trigger: ACACCAGGTCATGGATCTCCACCAGCAAGATGGGAG...GAATTCAGAACATTCTGGATCAGCTGGCGTGGTGGCCTTATCCAGGTTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp CCCACAACTGCATGTGGTTGTAGGATTATCTCAAGGTGCAGGTGTTTGACATCCAATGAACTGGACCTCTaGTGGCCTCGGGAGGGTCCA +
Preference number: 2 (lower is better)
Translates to: PTTACGCRIISRCRCLTSNELDL*WPREGP
Trigger: TGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATT...GGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGCAGTTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 90 bp AAGTTTTGTGTGTTAGAAAAAGATGCACAGTGTCTTGCTCAGATGTaGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTGGACCCGC +
Preference number: 2 (lower is better)
Translates to: KFCVLEKDAQCLAQM*VSGLPISPEALWTR
Trigger: GCGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGCAAGACACTGTGCATCTTTTTCTAACACACAAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR GCA 90 bp CCCACAACTGCATGTGGTTGTAGGATTATCTCAAGGTGCAGGTGTTTGACATCCGCCCAACAAACTGGATaGCCTTGGGAACCGAGAGCT +
Preference number: 2 (lower is better)
Translates to: PTTACGCRIISRCRCLTSAQQTG*PWEPRA
Trigger: AGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGC...GGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGCAGTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp CCCACAACTGCATGTGGTTGTAGGATTATCTCAAGGTGCAGGTGTTTGACATCCGGATGCCCAACAAACTaGATGCCCTTGGGAACCGAG +
Preference number: 2 (lower is better)
Translates to: PTTACGCRIISRCRCLTSGCPTN*MPLGTE
Trigger: CTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCC...GGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGCAGTTGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp TTTCTGAAGATACTTCAAGACAAAGACGTTGGGTGCAAAGTGGATCATGTTCTGACAGAACGACCCAGATaGGCTCAGCCTCCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: FLKILQDKDVGCKVDHVLTERPR*AQPPRG
Trigger: CCCCCGGGGAGGCTGAGCCCATCTGGGTCGTTCTGT...CAGAACATGATCCACTTTGCACCCAACGTCTTTGTCTTGAAGTATCTTCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp ATGGCCAACCTGGATAAGGCCACCACGCCAGCTGATCCAGAATGTTCTGAATTCTGTGGACTCTCTCACTaGGACAGAAGAATGCGCTGT +
Preference number: 2 (lower is better)
Translates to: MANLDKATTPADPECSEFCGLSH*DRRMRC
Trigger: ACAGCGCATTCTTCTGTCCCAGTGAGAGAGTCCACA...GAATTCAGAACATTCTGGATCAGCTGGCGTGGTGGCCTTATCCAGGTTGGCCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp ATACCACCCCGGAGAAGATGGGCAAATGCAGACATAAGCAGGTGCCAGGGGTCATTTTGGCCACACGAGTaGTTTCTGGGAATGTTTCTT +
Preference number: 2 (lower is better)
Translates to: IPPRRRWANADISRCQGSFWPHE*FLGMFL
Trigger: AAGAAACATTCCCAGAAAGCACTCGTGTGGCCAAAA...TGACCCCTGGCACCTGCTTATGTCTGCATTTGCCCATCTTCTCCGGGGTGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR TCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCCTGCACCACACCGGTaGCTGCTGAGCCCACACCTG +
Preference number: 2 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYPAPHR*LLSPHL
Trigger: CAGGTGTGGGCTCAGCAGTCACCGGTGTGGTGCAGG...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR GCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGGCGTTTGCCAGGATaGCCAACAAACTGGATGCCC +
Preference number: 2 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVWRLPG*PTNWMP
Trigger: GGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp CCCTTGCATTTCATATTTCACAGGCAAACGTCCAAATGTGCAGCGGGACTCAAGGTCTTGCTCAGATGTTaGTATCAGGCCTGCCCATCT +
Preference number: 2 (lower is better)
Translates to: PLHFIFHRQTSKCAAGLKVLLRC*YQACPS
Trigger: AGATGGGCAGGCCTGATACCAACATCTGAGCAAGAC...CTTGAGTCCCGCTGCACATTTGGACGTTTGCCTGTGAAATATGAAATGCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR CCA 90 bp CCCACAACTGCATGTGGTTGTAGGATTATCTCAAGGTGCAGGTGTTTGACATCCCCACACACATCTTCTTaGTCACATGGCGTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: PTTACGCRIISRCRCLTSPHTSS*SHGVCQ
Trigger: CTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGG...GGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGCAGTTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp GGTTTTCTGAAGATACTTCAAGACAAAGACGTTGGGTGCAAAGTGGATCATGTTCCCAGGAGAGGATCTTaGCCGTGTGTGCACTGGCCA +
Preference number: 2 (lower is better)
Translates to: GFLKILQDKDVGCKVDHVPRRGS*PCVHWP
Trigger: TGGCCAGTGCACACACGGCCAAGATCCTCTCCTGGG...AACATGATCCACTTTGCACCCAACGTCTTTGTCTTGAAGTATCTTCAGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp GTGTTGGCTGAAATAAATACCACCCCGGAGAAGATGGGCAAATGCAGACATAAGAGTCTTAGGGCAATTTaGGGTCCTGGGTGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: VLAEINTTPEKMGKCRHKSLRAI*GPGCPK
Trigger: TTTGGGGCACCCAGGACCCCAAATTGCCCTAAGACT...CTTATGTCTGCATTTGCCCATCTTCTCCGGGGTGGTATTTATTTCAGCCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CAA 90 bp GCAAACGTCCAAATGTGCAGCGGGACTCAAGGCTGGCTTCATGGCTaGAAGTTTTGTGTGTTAGAAAAAGATGCACAGTGTCTTGCTCAG +
Preference number: 2 (lower is better)
Translates to: ANVQMCSGTQGWLHG*KFCVLEKDAQCLAQ
Trigger: CTGAGCAAGACACTGTGCATCTTTTTCTAACACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR TCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAGCGATGCCTAAGCCCTaGGAGGTGGACAGGGCCACG +
Preference number: 2 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLAMPKP*EVDRAT
Trigger: CGTGGCCCTGTCCACCTCTCAGGGCTTAGGCATCGC...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGAGGGGAATCAAAGTCTaGTGGTACTGGTGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVRGIKV*WYWWQA
Trigger: TGCCTGCCACCAGTACCAGCAGACTTTGATTCCCCT...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACACCAGGCTCCCTGTGTaGGGCTGGAAAGCGGGGACA +
Preference number: 2 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYTRLPV*GWKAGT
Trigger: TGTCCCCGCTTTCCAGCCCCACACAGGGAGCCTGGT...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGTCAGAAAGAGGCTTTTaGCCACACGAGTGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGSERGF*PHECFL
Trigger: CAGAAAGCACTCGTGTGGCCAAAAGCCTCTTTCTGA...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR GCA 90 bp CAAATGTGCAGCGGGACTCAAGGCTGGCTTCATGGCTTGAAGTTTTGTGTGTTACTGATGTTGAGACAATaGCAAATCCATGTTTCGGGG +
Preference number: 2 (lower is better)
Translates to: QMCSGTQGWLHGLKFCVLLMLRQ*QIHVSG
Trigger: CCCCGAAACATGGATTTGGCATTGTCTCAACATCAG...TAACACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR GCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAGATCTTGGCCGTGTGTaGACTGGCCACGGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLDLGRV*TGHGLS
Trigger: GGAGAGCCCGTGGCCAGTGCACACACGGCCAAGATC...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CCA 90 bp GTTATAAGAGGCACAAAGCCCTTGCATTTCATATTTCACAGGCAAACGTCCAAATCACCGGAGGCTCTCTaGACCCGCATGAGTGTCTTT +
Preference number: 2 (lower is better)
Translates to: VIRGTKPLHFIFHRQTSKSPEAL*TRMSVF
Trigger: AAAGACACTCATGCGGGTCCAGAGAGCCTCCGGTGA...TTTGGACGTTTGCCTGTGAAATATGAAATGCAAGGGCTTTGTGCCTCTTATAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR GCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAGATCTCGATCATGCCTaGTGTGTCCTGGGGCCCAGA +
Preference number: 2 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLDLDHA*CVLGPR
Trigger: TCTGGGCCCCAGGACACAGCAGGCATGATCGAGATC...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR TCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAGGCAGAGATCAGGGCTaGGCGGTGTTGGCTGAAATA +
Preference number: 2 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLGRDQG*AVLAEI
Trigger: TATTTCAGCCAACACCGCTCAGCCCTGATCTCTGCC...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTATGTCCCCTCACCAGATaGGTCACTGATGTTGAGACA +
Preference number: 2 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLCPLTR*VTDVET
Trigger: TGTCTCAACATCAGTGACCCATCTGGTGAGGGGACA...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR GCA 90 bp TATACAAACAGAGCAGATAGAGTAACCCCAAGAGGGAGTTATAAGAGGCACAAATGTGTTAGAAAAAGATaGACAGTGTCTTGCTCAGAT +
Preference number: 2 (lower is better)
Translates to: YTNRADRVTPRGSYKRHKCVRKR*TVSCSD
Trigger: ATCTGAGCAAGACACTGTGCATCTTTTTCTAACACA...TTTGTGCCTCTTATAACTCCCTCTTGGGGTTACTCTATCTGCTCTGTTTGTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR CCA 72 bp CCTGGCGGCAGGCGGCCTCCCGCAGGCGGCAGGCGCTaGCGTAGACCACCCCGTCGGAGCCGCACACCGGGT +
Preference number: 3 (lower is better)
Translates to: PGGRRPPAGGRR*RRPPRRSRTPG
Trigger: ACCCGGTGTGCGGCTCCGACGGGGTGGTCTACGCCAGCGCCTGCCGCCTGCGGGAGGCCGCCTGCCGCCAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp GAGCCGCACACCGGGTTCCCCTGGGCGCCGCAGTCGTaGTCGCAGCCGCATCGCGCGATCGCCGCCCCCTCC +
Preference number: 3 (lower is better)
Translates to: EPHTGFPWAPQS*SQPHRAIAAPS
Trigger: GGAGGGGGCGGCGATCGCGCGATGCGGCTGCGACCACGACTGCGGCGCCCAGGGGAACCCGGTGTGCGGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp GGCCAGGCTACGGAGCTTGCGCAGTGCCTCAGGGGCTaGCGGGCTGCGGAGCAGGGTCAGCGCGTAGGTAGT +
Preference number: 3 (lower is better)
Translates to: GQATELAQCLRG*RAAEQGQRVGS
Trigger: ACTACCTACGCGCTGACCCTGCTCCGCAGCCCGGCAGCCCCTGAGGCACTGCGCAAGCTCCGTAGCCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp GGCGGTGGCTCGCTCAGACCCAGGGATGGCGCCGTGTaGGACCCCCAGGGTGAAGGCCTCGCTGTAGCTCTC +
Preference number: 3 (lower is better)
Translates to: GGGSLRPRDGAV*DPQGEGLAVAL
Trigger: GAGAGCTACAGCGAGGCCTTCACCCTGGGGGTCCCACACGGCGCCATCCCTGGGTCTGAGCGAGCCACCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp GGTGGGGAACCCACCGGCCAGGGCAGCCTCAGACCTTaGTCTCACAGGCAGCGAGGGGCCTCCGTGCTGGCA +
Preference number: 3 (lower is better)
Translates to: GGEPTGQGSLRP*SHRQRGASVLA
Trigger: TGCCAGCACGGAGGCCCCTCGCTGCCTGTGAGATCAAGGTCTGAGGCTGCCCTGGCCGGTGGGTTCCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 72 bp CCCACGGCCAGGAAGGAGCCATCGGCCTGCTGCTGCTaGATGATCCAGCTCTTGGCGGCAGCCAGCTCCCGG +
Preference number: 3 (lower is better)
Translates to: PTARKEPSACCC*MIQLLAAASSR
Trigger: CCGGGAGCTGGCTGCCGCCAAGAGCTGGATCATCCAGCAGCAGCAGGCCGATGGCTCCTTCCTGGCCGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp GAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTaGCGCTCTGGGTGCTGCTTTCCAGGTTCCCGCTGC +
Preference number: 3 (lower is better)
Translates to: EGPESGPICGTG*RSGCCFPGSRC
Trigger: GCAGCGGGAACCTGGAAAGCAGCACCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000388925.8
ENST00000594249.5
3UTR CCA 72 bp GAGCCACAGGGCCTGTCGCTTGTAGGGTGCCAGGGGTaGGGAACCCACCGGCCAGGGCAGCCTCAGACCTTG +
Preference number: 3 (lower is better)
Translates to: EPQGLSLVGCQG*GTHRPGQPQTL
Trigger: CAAGGTCTGAGGCTGCCCTGGCCGGTGGGTTCCCCACCCCTGGCACCCTACAAGCGACAGGCCCTGTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CAA 90 bp GGAGACTGGCAGCGCCGACGTCCTGCCCACCACGCACTCCCGGAGAGCACGGAAAGCTGGAAAGCTGGCTaGGCCACCGGGTCAGGCACA +
Preference number: 3 (lower is better)
Translates to: GDWQRRRPAHHALPESTESWKAG*ATGSGT
Trigger: TGTGCCTGACCCGGTGGCCAAGCCAGCTTTCCAGCT...TTCCGTGCTCTCCGGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGCCAGTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp TGGTCCTCTGGGCACGAGGACATCAGGAACTCACGGTaGGGAAGCACCGGGGTCACCCAGCCCCGGCAGCCG +
Preference number: 3 (lower is better)
Translates to: WSSGHEDIRNSR*GSTGVTQPRQP
Trigger: CGGCTGCCGGGGCTGGGTGACCCCGGTGCTTCCTCACCGTGAGTTCCTGATGTCCTCGTGCCCAGAGGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 72 bp CTGCCCACGGCCAGGAAGGAGCCATCGGCCTGCTGCTaGTGGATGATCCAGCTCTTGGCGGCAGCCAGCTCC +
Preference number: 3 (lower is better)
Translates to: LPTARKEPSACC*WMIQLLAAASS
Trigger: GGAGCTGGCTGCCGCCAAGAGCTGGATCATCCAGCAGCAGCAGGCCGATGGCTCCTTCCTGGCCGTGGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp GTTGCACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTaGGCTGTGGGTGCTGACGTTGTAGAAGCGAGTGGC +
Preference number: 3 (lower is better)
Translates to: VARGSGAQFPGE*AVGADVVEASG
Trigger: GCCACTCGCTTCTACAACGTCAGCACCCACAGCCCACTCGCCCGGGAACTGTGCGCCGGACCCGCGTGCAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp CAGACCCAGGGATGGCGCCGTGTGGGACCCCCAGGGTaGAGGCCTCGCTGTAGCTCTCGTCCACCTCCATCT +
Preference number: 3 (lower is better)
Translates to: QTQGWRRVGPPG*RPRCSSRPPPS
Trigger: AGATGGAGGTGGACGAGAGCTACAGCGAGGCCTTCACCCTGGGGGTCCCACACGGCGCCATCCCTGGGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp CGGCGCACAGTTCCCGGGCGAGTGGGCTGTGGGTGCTaGCGTTGTAGAAGCGAGTGGCCTCGAAGGCGGGTT +
Preference number: 3 (lower is better)
Translates to: RRTVPGRVGCGC*RCRSEWPRRRV
Trigger: AACCCGCCTTCGAGGCCACTCGCTTCTACAACGTCAGCACCCACAGCCCACTCGCCCGGGAACTGTGCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp AGTAGTCGTACACGGAGACTGGCAGCGCCGACGTCCTaGCCACCACGCACTCCCGGAGAGCACGGAACCGCA +
Preference number: 3 (lower is better)
Translates to: SSRTRRLAAPTS*PPRTPGEHGTA
Trigger: TGCGGTTCCGTGCTCTCCGGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGCCAGTCTCCGTGTACGACTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp TCTGGCCCCATCTGTGGAACGGGCTGGCGCTCTGGGTaGTGCTTTCCAGGTTCCCGCTGCTCACAGGAGGCC +
Preference number: 3 (lower is better)
Translates to: SGPICGTGWRSG*CFPGSRCSQEA
Trigger: GGCCTCCTGTGAGCAGCGGGAACCTGGAAAGCAGCACCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388925.8
ENST00000594249.5
3UTR CCA 72 bp CGGCAGCCGCAGGAGGTTGTTGAGGTGGTTCAGGGTTaGCCCCATGACGTCCCCGATGATGGAGGCGGTGGC +
Preference number: 3 (lower is better)
Translates to: RQPQEVVEVVQG*PHDVPDDGGGG
Trigger: GCCACCGCCTCCATCATCGGGGACGTCATGGGGCCAACCCTGAACCACCTCAACAACCTCCTGCGGCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp CTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTaGCAGCGCCGACGTCCTGCCCACCACGCACTCCCG +
Preference number: 3 (lower is better)
Translates to: LEGGFVVVVHGD*QRRRPAHHALP
Trigger: CGGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp AGGCGCTGGCGTAGACCACCCCGTCGGAGCCGCACACCGGGTTCCCCTGGGCGCTGGAACTCATACTTGTaGGGGGTGGAGATGTGGACT +
Preference number: 3 (lower is better)
Translates to: RRWRRPPRRSRTPGSPGRWNSYL*GVEMWT
Trigger: AGTCCACATCTCCACCCCCAACAAGTATGAGTTCCA...GCGCCCAGGGGAACCCGGTGTGCGGCTCCGACGGGGTGGTCTACGCCAGCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp GTCTCTGAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTGGCGCTCTGGGACGGGCTCTCCCATCTaGCTGGTGGAGATCCATGAC +
Preference number: 3 (lower is better)
Translates to: VSEGPESGPICGTGWRSGTGSPI*LVEIHD
Trigger: GTCATGGATCTCCACCAGCAAGATGGGAGAGCCCGT...CCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTCAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp GGCTCAGAAGCCCTGGCCTGTGGGCCCCCACCACCCGGCCACTATGTCTCTGAGGCAGCCTGTTCCGTTTaGAAGTTGCCCACCGGCTGG +
Preference number: 3 (lower is better)
Translates to: GSEALACGPPPPGHYVSEAACSV*KLPTGW
Trigger: CCAGCCGGTGGGCAACTTCAAAACGGAACAGGCTGC...CTCAGAGACATAGTGGCCGGGTGGTGGGGGCCCACAGGCCAGGGCTTCTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 72 bp CCCATGGAGCCCCAGCCGGTGGAAAAGCCAATGAACTaGACCTCTGGTGGCCTCGGGAGGGTCCAGGCCACA +
Preference number: 3 (lower is better)
Translates to: PMEPQPVEKPMN*TSGGLGRVQAT
Trigger: TGTGGCCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATTGGCTTTTCCACCGGCTGGGGCTCCATGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp CCCTGGGCCTCAGGCTCCTGGAGGCTTACGAGCAGCTaGAAAGCTGGCTTGGCCACCGGGTCAGGCACATTG +
Preference number: 3 (lower is better)
Translates to: PWASGSWRLTSS*KAGLATGSGTL
Trigger: CAATGTGCCTGACCCGGTGGCCAAGCCAGCTTTCCAGCTGCTCGTAAGCCTCCAGGAGCCTGAGGCCCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp GTGATGCTGATCGGCCGCTGGGTCATCATCGTCAGCTaGGGGCCAGTCTCCTCGGGAACCCTCAGCTGCGGA +
Preference number: 3 (lower is better)
Translates to: VMLIGRWVIIVS*GPVSSGTLSCG
Trigger: TCCGCAGCTGAGGGTTCCCGAGGAGACTGGCCCCCAGCTGACGATGATGACCCAGCGGCCGATCAGCATCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp AGAGGGTGCGAGAGCTGGGACAGTCTTAGGGCAATTTaGGGTCCTGGGTGCCCCAAAGGGAGGCCGGGGCTT +
Preference number: 3 (lower is better)
Translates to: RGCESWDSLRAI*GPGCPKGRPGL
Trigger: AAGCCCCGGCCTCCCTTTGGGGCACCCAGGACCCCAAATTGCCCTAAGACTGTCCCAGCTCTCGCACCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CAA 90 bp CTCTTGGCGGCAGCCAGCTCCCGGGGGTCCACGAAGATAAAGCTGCGAGCCTGTGGCAGCCGCAGGAGGTaGTTGAGGTGGTTCAGGGTT +
Preference number: 3 (lower is better)
Translates to: LLAAASSRGSTKIKLRACGSRRR*LRWFRV
Trigger: AACCCTGAACCACCTCAACAACCTCCTGCGGCTGCC...ACAGGCTCGCAGCTTTATCTTCGTGGACCCCCGGGAGCTGGCTGCCGCCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp GGGTCATCATCGTCAGCTGGGGGCCAGTCTCCTCGGGAACCCTCAGCTGCGGAGCATCCCGGCAGCAATTaGTGTCTCCGTAAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: GSSSSAGGQSPREPSAAEHPGSN*CLRKQG
Trigger: CCCTTGCTTACGGAGACACAAATTGCTGCCGGGATG...CTCCGCAGCTGAGGGTTCCCGAGGAGACTGGCCCCCAGCTGACGATGATGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp ATTCACCCATGGAGCCCCAGCCGGTGGAAAAGCCAATaGACTGGACCTCTGGTGGCCTCGGGAGGGTCCAGG +
Preference number: 3 (lower is better)
Translates to: IHPWSPSRWKSQ*TGPLVASGGSR
Trigger: CCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATTGGCTTTTCCACCGGCTGGGGCTCCATGGGTGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp GCAGCGAGGGGCCTCCGTGCTGGCAGAGATCAGGGCTaGGCGGTGTTGGCTGAAATAAATACCACCCCGGAG +
Preference number: 3 (lower is better)
Translates to: AARGLRAGRDQG*AVLAEINTTPE
Trigger: CTCCGGGGTGGTATTTATTTCAGCCAACACCGCTCAGCCCTGATCTCTGCCAGCACGGAGGCCCCTCGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 72 bp TCCACCTCAAGGCCGGCTCCATTCAGCTTCACGTCCTaGTGTAAAGGCCCCGGGGCCACAGAAGCCAGGTCA +
Preference number: 3 (lower is better)
Translates to: STSRPAPFSFTS*CKGPGATEARS
Trigger: TGACCTGGCTTCTGTGGCCCCGGGGCCTTTACAGCAGGACGTGAAGCTGAATGGAGCCGGCCTTGAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp AGCAGGTGCCAGGGGTCACAAAGGGGAATCAAAGTCTaGTGGTACTGGTGGCAGGCAGCTGGTAGGGCCCCC +
Preference number: 3 (lower is better)
Translates to: SRCQGSQRGIKV*WYWWQAAGRAP
Trigger: GGGGGCCCTACCAGCTGCCTGCCACCAGTACCAGCAGACTTTGATTCCCCTTTGTGACCCCTGGCACCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 72 bp GCCCCAGCCGGTGGAAAAGCCAATGAACTGGACCTCTaGTGGCCTCGGGAGGGTCCAGGCCACAATGACAGA +
Preference number: 3 (lower is better)
Translates to: APAGGKANELDL*WPREGPGHNDR
Trigger: TCTGTCATTGTGGCCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATTGGCTTTTCCACCGGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp GGCGTCCCTGGGCCTCAGGCTCCTGGAGGCTTACGAGCAGCTGGAAAGCTGGCTACAAACTGGATGCCCTaGGGAACCGAGAGCTTCATG +
Preference number: 3 (lower is better)
Translates to: GVPGPQAPGGLRAAGKLATNWMP*GTESFM
Trigger: CATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGT...AGCCAGCTTTCCAGCTGCTCGTAAGCCTCCAGGAGCCTGAGGCCCAGGGACGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp TCCGGCGCACAGTTCCCGGGCGAGTGGGCTGTGGGTGCTGACGTTGTAGAAGCGTTGGTCACATGGCGTTaGCCAGGATGCCCAACAAAC +
Preference number: 3 (lower is better)
Translates to: SGAQFPGEWAVGADVVEALVTWR*PGCPTN
Trigger: GTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAA...CGCTTCTACAACGTCAGCACCCACAGCCCACTCGCCCGGGAACTGTGCGCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp ACTGGGACAGAAGAATGCGCTGTAGGTGTACGCCCGGGGGACTCCTTCCGCCTCGCTTTGGCCGTGATGTaGTTGAGTCCCAGGTCGCTG +
Preference number: 3 (lower is better)
Translates to: TGTEECAVGVRPGDSFRLALAVM*LSPRSL
Trigger: CAGCGACCTGGGACTCAACAACATCACGGCCAAAGC...GAGGCGGAAGGAGTCCCCCGGGCGTACACCTACAGCGCATTCTTCTGTCCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp AGAAGCGAGTGGCCTCGAAGGCGGGTTCGTAGTAGTCGTACACGGAGACTGGCATCCCAGGAGAGGATCTaGGCCGTGTGTGCACTGGCC +
Preference number: 3 (lower is better)
Translates to: RSEWPRRRVRSSRTRRLASQERI*AVCALA
Trigger: GGCCAGTGCACACACGGCCAAGATCCTCTCCTGGGA...TGCCAGTCTCCGTGTACGACTACTACGAACCCGCCTTCGAGGCCACTCGCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp GCCTGCCCATCTCACCGGAGGCTCTCTGGACCCGCATaGGTGTCTTTCACTCAACCGGCAAAGTCAGCGCAG +
Preference number: 3 (lower is better)
Translates to: ACPSHRRLSGPA*VSFTQPAKSAQ
Trigger: CTGCGCTGACTTTGCCGGTTGAGTGAAAGACACTCATGCGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR GCA 72 bp GGAGAGCAACCACCACGTAGGCTGTCAGCGGGACAGTaGCGTGGATCCCACCCTGGATGTCCTTGTTCAGGA +
Preference number: 3 (lower is better)
Translates to: GEQPPRRLSAGQ*RGSHPGCPCSG
Trigger: TCCTGAACAAGGACATCCAGGGTGGGATCCACGGCACTGTCCCGCTGACAGCCTACGTGGTGGTTGCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp GCCTCCCCGGGGGCCACACACATCTTCTTGGTCACATaGCGTTTGCCAGGATGCCCAACAAACTGGATGCCC +
Preference number: 3 (lower is better)
Translates to: ASPGATHIFLVT*RLPGCPTNWMP
Trigger: GGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGGGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp CCAGCCGGTGGAAAAGCCAATGAACTGGACCTCTGGTaGCCTCGGGAGGGTCCAGGCCACAATGACAGACTC +
Preference number: 3 (lower is better)
Translates to: PAGGKANELDLW*PREGPGHNDRL
Trigger: GAGTCTGTCATTGTGGCCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATTGGCTTTTCCACCGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp CTCAGGCTCCTGGAGGCTTACGAGCAGCTGGAAAGCTaGCTTGGCCACCGGGTCAGGCACATTGTAGGTGAC +
Preference number: 3 (lower is better)
Translates to: LRLLEAYEQLES*LGHRVRHIVGD
Trigger: GTCACCTACAATGTGCCTGACCCGGTGGCCAAGCCAGCTTTCCAGCTGCTCGTAAGCCTCCAGGAGCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp GTCTCTGAGGGGCCGGAGTCTGGCCCCATCTGTGGAACGGGCTGGCGCTCTGGGGATGGGTCACTGATGTaGAGACAATGCCAAATCCAT +
Preference number: 3 (lower is better)
Translates to: VSEGPESGPICGTGWRSGDGSLM*RQCQIH
Trigger: ATGGATTTGGCATTGTCTCAACATCAGTGACCCATC...CCCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGACTCCGGCCCCTCAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp AGTAGTCGTACACGGAGACTGGCAGCGCCGACGTCCTGCCCACCACGCACTCCCACAATGACAGACTCATaGGATGGCTCTGGACCATGG +
Preference number: 3 (lower is better)
Translates to: SSRTRRLAAPTSCPPRTPTMTDS*DGSGPW
Trigger: CCATGGTCCAGAGCCATCCAATGAGTCTGTCATTGT...GGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGCCAGTCTCCGTGTACGACTACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp CCTCGGCCGAGACCACTGACTGAGAGACCCTGTCACTaGAGCTCAAGAATGTGCCCTTGTCCACGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: PRPRPLTERPCH*SSRMCPCPRPR
Trigger: CCTGGGACGTGGACAAGGGCACATTCTTGAGCTTCAGTGACAGGGTCTCTCAGTCAGTGGTCTCGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp GGACCCTCCTGTCGGCGTGATTCTCCTCAGGGTGTTTaGTGGACCTCCCATCCCGGCAGCAATTTGTGTCTC +
Preference number: 3 (lower is better)
Translates to: GPSCRRDSPQGV*WTSHPGSNLCL
Trigger: GAGACACAAATTGCTGCCGGGATGGGAGGTCCAGCAAACACCCTGAGGAGAATCACGCCGACAGGAGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp CCCACCATACAGAGTCACAGGCTGATAGGGACAGGATaGAGCCAGATGGTGTCGTCCTGCTCTCAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: PTIQSHRLIGTG*SQMVSSCSQQG
Trigger: GCCCTGCTGAGAGCAGGACGACACCATCTGGCTGCATCCTGTCCCTATCAGCCTGTGACTCTGTATGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 72 bp AGCTGGGACAGTCTTAGGGCAATTTGGGGTCCTGGGTaGCCCAAAGGGAGGCCGGGGCTTTGTGTTTCAGAG +
Preference number: 3 (lower is better)
Translates to: SWDSLRAIWGPG*PKGRPGLCVSE
Trigger: CTCTGAAACACAAAGCCCCGGCCTCCCTTTGGGGCACCCAGGACCCCAAATTGCCCTAAGACTGTCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 72 bp AGCCGGAAGCTGAAAGTGCATTTGCTGAGAGCCATCTaGTTCCCCGCAGGGCCTTGTGATGTGAGCCCGAGG +
Preference number: 3 (lower is better)
Translates to: SRKLKVHLLRAI*FPAGPCDVSPR
Trigger: CCTCGGGCTCACATCACAAGGCCCTGCGGGGAAGCAGATGGCTCTCAGCAAATGCACTTTCAGCTTCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 72 bp CCCTCCTGTCGGCGTGATTCTCCTCAGGGTGTTTGCTaGACCTCCCATCCCGGCAGCAATTTGTGTCTCCGT +
Preference number: 3 (lower is better)
Translates to: PSCRRDSPQGVC*TSHPGSNLCLR
Trigger: ACGGAGACACAAATTGCTGCCGGGATGGGAGGTCCAGCAAACACCCTGAGGAGAATCACGCCGACAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp CATCACCTTGTATTCCTGGTGATGCTGATCGGCCGCTaGGTCATCATCGTCAGCTGGGGGCCAGTCTCCTCG +
Preference number: 3 (lower is better)
Translates to: HHLVFLVMLIGR*VIIVSWGPVSS
Trigger: CGAGGAGACTGGCCCCCAGCTGACGATGATGACCCAGCGGCCGATCAGCATCACCAGGAATACAAGGTGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp ACAGCCACATCAAAGCGGGTGAGGCGCAGTGGCCGCTaGACATACTGGAACTCATACTTGTTGGGGGTGGAG +
Preference number: 3 (lower is better)
Translates to: TATSKRVRRSGR*TYWNSYLLGVE
Trigger: CTCCACCCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGCTTTGATGTGGCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp TCTGAATTCATCCCAGGAGAGGATCTTGGCCGTGTGTaGACTGGCCACGGGCTCTCCCATCTTGCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: SEFIPGEDLGRV*TGHGLSHLAGG
Trigger: TCCACCAGCAAGATGGGAGAGCCCGTGGCCAGTGCACACACGGCCAAGATCCTCTCCTGGGATGAATTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp CTCCCGGGGGTCCACGAAGATAAAGCTGCGAGCCTGTaGGAAGGACTTCAGGACAAAGGCTGTGAGCCACAT +
Preference number: 3 (lower is better)
Translates to: LPGVHEDKAASL*EGLQDKGCEPH
Trigger: ATGTGGCTCACAGCCTTTGTCCTGAAGTCCTTCGCACAGGCTCGCAGCTTTATCTTCGTGGACCCCCGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp CGGCGTCCAGCCACTTCATACCTCTTCATCCCCATGTaGTTGTCAAGGAGCAGCTGCTCCAGGCTCTCGATG +
Preference number: 3 (lower is better)
Translates to: RRPATSYLFIPM*LSRSSCSRLSM
Trigger: CATCGAGAGCCTGGAGCAGCTGCTCCTTGACAAGCACATGGGGATGAAGAGGTATGAAGTGGCTGGACGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp GGCGTTTGCCAGGATGCCCAACAAACTGGATGCCCTTaGGAACCGAGAGCTTCATGTACACCTCAGCGCAGG +
Preference number: 3 (lower is better)
Translates to: GVCQDAQQTGCP*EPRASCTPQRR
Trigger: CCTGCGCTGAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp AGCTCGCACAGCCACATCAAAGCGGGTGAGGCGCAGTaGCCGCTGCACATACTGGAACTCATACTTGTTGGG +
Preference number: 3 (lower is better)
Translates to: SSHSHIKAGEAQ*PLHILELILVG
Trigger: CCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGCTTTGATGTGGCTGTGCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp GGTCCAGGCCACAATGACAGACTCATTGGATGGCTCTaGACCATGGCCAACCTGGATAAGGCCACCACGCCA +
Preference number: 3 (lower is better)
Translates to: GPGHNDRLIGWL*TMANLDKATTP
Trigger: TGGCGTGGTGGCCTTATCCAGGTTGGCCATGGTCCAGAGCCATCCAATGAGTCTGTCATTGTGGCCTGGACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp CAGCCTCAGACCTTGATCTCACAGGCAGCGAGGGGCCTCCGTGCTGGCAGAGATAAGCTGAAAGTGCATTaGCTGAGAGCCATCTGCTTC +
Preference number: 3 (lower is better)
Translates to: QPQTLISQAARGLRAGRDKLKVH*LRAICF
Trigger: GAAGCAGATGGCTCTCAGCAAATGCACTTTCAGCTT...ATCTCTGCCAGCACGGAGGCCCCTCGCTGCCTGTGAGATCAAGGTCTGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR TCA 72 bp CATCATTGTGAGCTCGCACAGCCACATCAAAGCGGGTaGGGCGCAGTGGCCGCTGCACATACTGGAACTCAT +
Preference number: 3 (lower is better)
Translates to: HHCELAQPHQSG*GAVAAAHTGTH
Trigger: ATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGCTTTGATGTGGCTGTGCGAGCTCACAATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp CGGGGGCCACACACATCTTCTTGGTCACATGGCGTTTaGCAGGATGCCCAACAAACTGGATGCCCTTGGGAA +
Preference number: 3 (lower is better)
Translates to: RGPHTSSWSHGV*QDAQQTGCPWE
Trigger: TTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp TTGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTaGACCCGCATGAGTGTCTTTCACTCAACCGGCAAA +
Preference number: 3 (lower is better)
Translates to: LVSGLPISPEAL*TRMSVFHSTGK
Trigger: TTTGCCGGTTGAGTGAAAGACACTCATGCGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR CCA 72 bp TCAAAGCGGGTGAGGCGCAGTGGCCGCTGCACATACTaGAACTCATACTTGTTGGGGGTGGAGATGTGGACT +
Preference number: 3 (lower is better)
Translates to: SKRVRRSGRCTY*NSYLLGVEMWT
Trigger: AGTCCACATCTCCACCCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGCTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR-3UTR CAA 90 bp GGTGCCAGGGGTCACAAAGGGGAATCAAAGTCTGCTGGTACTGGTGGCAGGCAGTGTTCCGTTTTGAAGTaGCCCACCGGCTGGATGTTT +
Preference number: 3 (lower is better)
Translates to: GARGHKGESKSAGTGGRQCSVLK*PTGWMF
Trigger: AAACATCCAGCCGGTGGGCAACTTCAAAACGGAACA...CTGCCTGCCACCAGTACCAGCAGACTTTGATTCCCCTTTGTGACCCCTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR TCA 72 bp GCTCAAGAATGTGCCCTTGTCCACGTCCCAGGAATTTaGCAGGCTCCAGTGGGTGACCCCATCTCGCATGAT +
Preference number: 3 (lower is better)
Translates to: AQECALVHVPGI*QAPVGDPISHD
Trigger: ATCATGCGAGATGGGGTCACCCACTGGAGCCTGTCAAATTCCTGGGACGTGGACAAGGGCACATTCTTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR TCA 72 bp CCGTGCTGGCAGAGATCAGGGCTGAGCGGTGTTGGCTaGAATAAATACCACCCCGGAGAAGATGGGCAAATG +
Preference number: 3 (lower is better)
Translates to: PCWQRSGLSGVG*NKYHPGEDGQM
Trigger: CATTTGCCCATCTTCTCCGGGGTGGTATTTATTTCAGCCAACACCGCTCAGCCCTGATCTCTGCCAGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 72 bp GCAGTGGCCGCTGCACATACTGGAACTCATACTTGTTaGGGGTGGAGATGTGGACTCTCTCACTGGGACAGA +
Preference number: 3 (lower is better)
Translates to: AVAAAHTGTHTC*GWRCGLSHWDR
Trigger: TCTGTCCCAGTGAGAGAGTCCACATCTCCACCCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp TCACATGGCGTTTGCCAGGATGCCCAACAAACTGGATaGCCTTGGGAACCGAGAGCTTCATGTACACCTCAG +
Preference number: 3 (lower is better)
Translates to: SHGVCQDAQQTG*PWEPRASCTPQ
Trigger: CTGAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp ACACACATCTTCTTGGTCACATGGCGTTTGCCAGGATaGCCAACAAACTGGATGCCCTTGGGAACCGAGAGC +
Preference number: 3 (lower is better)
Translates to: THIFLVTWRLPG*PTNWMPLGTES
Trigger: GCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CCA 72 bp TTGGTCACATGGCGTTTGCCAGGATGCCCAACAAACTaGATGCCCTTGGGAACCGAGAGCTTCATGTACACC +
Preference number: 3 (lower is better)
Translates to: LVTWRLPGCPTN*MPLGTESFMYT
Trigger: GGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp GCTGAAATAAATACCACCCCGGAGAAGATGGGCAAATaGAGACATAAGCAGGTGCCAGGGGTCACAAAGGGG +
Preference number: 3 (lower is better)
Translates to: AEINTTPEKMGK*RHKQVPGVTKG
Trigger: CCCCTTTGTGACCCCTGGCACCTGCTTATGTCTGCATTTGCCCATCTTCTCCGGGGTGGTATTTATTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CCA 72 bp CCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTaGGTGTGTGGGTATGAATGGTCCCCAGGACCAAAC +
Preference number: 3 (lower is better)
Translates to: PEFSEMLTTGTS*VCGYEWSPGPN
Trigger: GTTTGGTCCTGGGGACCATTCATACCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000388925.8
ENST00000443236.7
ENST00000594249.5
ENST00000651564.1
3UTR CCA 72 bp GCTCAGAAAGAGGCTTTTGGCCACACGAGTGCTTTCTaGGAATGTTTCTTCTCCCGGGAACAGAATGTCAGG +
Preference number: 3 (lower is better)
Translates to: AQKEAFGHTSAF*ECFFSREQNVR
Trigger: CCTGACATTCTGTTCCCGGGAGAAGAAACATTCCCAGAAAGCACTCGTGTGGCCAAAAGCCTCTTTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594249.5
ENST00000598792.1
3UTR-3UTR CAA 90 bp GCACAAAGCCCTTGCATTTCATATTTCACAGGCAAACGTCCAAATGTGCAGCGGTGTCTTGCTCAGATGTaGGTATCAGGCCTGCCCATC +
Preference number: 3 (lower is better)
Translates to: AQSPCISYFTGKRPNVQRCLAQM*VSGLPI
Trigger: GATGGGCAGGCCTGATACCAACATCTGAGCAAGACA...CCGCTGCACATTTGGACGTTTGCCTGTGAAATATGAAATGCAAGGGCTTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR GCA 72 bp CGTGTTTGCTCAGAAAGAGGCTTTTGGCCACACGAGTaGTTTCTGGGAATGTTTCTTCTCCCGGGAACAGAA +
Preference number: 3 (lower is better)
Translates to: RVCSERGFWPHE*FLGMFLLPGTE
Trigger: TTCTGTTCCCGGGAGAAGAAACATTCCCAGAAAGCACTCGTGTGGCCAAAAGCCTCTTTCTGAGCAAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR GCA 72 bp CTTGCATTTCATATTTCACAGGCAAACGTCCAAATGTaGAGCGGGACTCAAGGCTGGCTTCATGGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: LAFHISQANVQM*SGTQGWLHGLK
Trigger: CTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGCCTGTGAAATATGAAATGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR CCA 72 bp CAGGCAAACGTCCAAATGTGCAGCGGGACTCAAGGCTaGCTTCATGGCTTGAAGTTTTGTGTGTTAGAAAAA +
Preference number: 3 (lower is better)
Translates to: QANVQMCSGTQG*LHGLKFCVLEK
Trigger: TTTTTCTAACACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR TCA 72 bp GCTTTGTGTTTCAGAGAAACGCAGCCTGTTCCGTTTTaGAGTTGCCCACCGGCTGGATGTTTTGCTAATTTA +
Preference number: 3 (lower is better)
Translates to: ALCFRETQPVPF*SCPPAGCFANL
Trigger: TAAATTAGCAAAACATCCAGCCGGTGGGCAACTTCAAAACGGAACAGGCTGCGTTTCTCTGAAACACAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR-3UTR CAA 90 bp TATACAAACAGAGCAGATAGAGTAACCCCAAGAGGGAGTTATAAGAGGCACAAAAAGATGCACAGTGTCTaGCTCAGATGTTGGTATCAG +
Preference number: 3 (lower is better)
Translates to: YTNRADRVTPRGSYKRHKKMHSV*LRCWYQ
Trigger: CTGATACCAACATCTGAGCAAGACACTGTGCATCTT...TTTGTGCCTCTTATAACTCCCTCTTGGGGTTACTCTATCTGCTCTGTTTGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR-3UTR CAA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTATACTGGAACTCATACTaGTTGGGGGTGGAGATGTGG +
Preference number: 3 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLYWNSY*LGVEMW
Trigger: CCACATCTCCACCCCCAACAAGTATGAGTTCCAGTA...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR GCA 72 bp AGAAAAGAAATCTTAATGTACCTGATGTTGAGACAATaGCAAATCCATGTTTCGGGGAAGAAAGTCCTTTTT +
Preference number: 3 (lower is better)
Translates to: RKEILMYLMLRQ*QIHVSGKKVLF
Trigger: AAAAAGGACTTTCTTCCCCGAAACATGGATTTGGCATTGTCTCAACATCAGGTACATTAAGATTTCTTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR CAA 72 bp GTGACCCCATCTCGCATGATGGCCAGGCTACGGAGCTaGCGCAGTGCCTCAGGGGCTGCCGGGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: VTPSRMMARLRS*RSASGAAGLRS
Trigger: GCTCCGCAGCCCGGCAGCCCCTGAGGCACTGCGCAAGCTCCGTAGCCTGGCCATCATGCGAGATGGGGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 72 bp TGCTCTCCACAGCCAAACGGCAGCCGCAGGAGGTTGTaGAGGTGGTTCAGGGTTGGCCCCATGACGTCCCCG +
Preference number: 4 (lower is better)
Translates to: CSPQPNGSRRRL*RWFRVGPMTSP
Trigger: CGGGGACGTCATGGGGCCAACCCTGAACCACCTCAACAACCTCCTGCGGCTGCCGTTTGGCTGTGGAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000388925.8
CDS-3UTR GCA 90 bp TGCTCAGATGTTGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTGGACCCGCCTGGAAGGAGCCACTaGCACCAGGCTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: CSDVGIRPAHLTGGSLDPPGRSH*HQAPCV
Trigger: CACACAGGGAGCCTGGTGGCAGTGGCTCCTTCCAGG...CGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR CAA 72 bp TCACCCAGCCCCGGCAGCCGGAAGCTGAAAGTGCATTaGCTGAGAGCCATCTGCTTCCCCGCAGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: SPSPGSRKLKVH*LRAICFPAGPC
Trigger: ACAAGGCCCTGCGGGGAAGCAGATGGCTCTCAGCAAATGCACTTTCAGCTTCCGGCTGCCGGGGCTGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594249.5
3UTR CAA 72 bp AAGCCTGACAGCAGGGGCACCTCCAGGACAGCCATATaGGAAGACCCTGCATGCAGCCACCTGGTGCACACC +
Preference number: 4 (lower is better)
Translates to: KPDSRGTSRTAI*EDPACSHLVHT
Trigger: GGTGTGCACCAGGTGGCTGCATGCAGGGTCTTCCAATATGGCTGTCCTGGAGGTGCCCCTGCTGTCAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 72 bp ATGGGCTCAGCCTCCCCGGGGGCCACACACATCTTCTaGGTCACATGGCGTTTGCCAGGATGCCCAACAAAC +
Preference number: 4 (lower is better)
Translates to: MGSASPGATHIF*VTWRLPGCPTN
Trigger: GTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGGGGAGGCTGAGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 72 bp GGCCTCGGGAGGGTCCAGGCCACAATGACAGACTCATaGGATGGCTCTGGACCATGGCCAACCTGGATAAGG +
Preference number: 4 (lower is better)
Translates to: GLGRVQATMTDS*DGSGPWPTWIR
Trigger: CCTTATCCAGGTTGGCCATGGTCCAGAGCCATCCAATGAGTCTGTCATTGTGGCCTGGACCCTCCCGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
CDS-3UTR GCA 90 bp TGCTCAGATGTTGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTGGACCCGGCAAACGTCCAAATGTaGAGCGGGACTCAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: CSDVGIRPAHLTGGSLDPANVQM*SGTQGW
Trigger: CCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGC...CGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR TCA 90 bp CTTGCTCAGATGTTGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTGGACCCTCTCTGGACCCGCATaGGTGTCTTTCACTCAACCG +
Preference number: 4 (lower is better)
Translates to: LAQMLVSGLPISPEALWTLSGPA*VSFTQP
Trigger: CGGTTGAGTGAAAGACACTCATGCGGGTCCAGAGAG...GGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR TCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGCCGAGGCCCGGCTGTaGCCCTGTCCTCCGCCTCCC +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCAEARL*PCPPPP
Trigger: GGGAGGCGGAGGACAGGGTCACAGCCGGGCCTCGGC...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
3UTR CAA 72 bp CCGGGGGCCACACACATCTTCTTGGTCACATGGCGTTaGCCAGGATGCCCAACAAACTGGATGCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PGATHIFLVTWR*PGCPTNWMPLG
Trigger: TCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGCCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
CDS-3UTR CCA 90 bp AAAAGATGCACAGTGTCTTGCTCAGATGTTGGTATCAGGCCTGCCCATCTCACCCCACCGTCCTGCCGGTaGTTCAGGCTCACTCGGTCG +
Preference number: 4 (lower is better)
Translates to: KRCTVSCSDVGIRPAHLTPPSCR*FRLTRS
Trigger: CGACCGAGTGAGCCTGAACCACCGGCAGGACGGTGG...GGTGAGATGGGCAGGCCTGATACCAACATCTGAGCAAGACACTGTGCATCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291440.4
3UTR CAA 72 bp TGGCGTTTGCCAGGATGCCCAACAAACTGGATGCCCTaGGGAACCGAGAGCTTCATGTACACCTCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: WRLPGCPTNWMP*GTESFMYTSAQ
Trigger: CTGCGCTGAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 72 bp CGCAGTGGCCGCTGCACATACTGGAACTCATACTTGTaGGGGGTGGAGATGTGGACTCTCTCACTGGGACAG +
Preference number: 4 (lower is better)
Translates to: RSGRCTYWNSYL*GVEMWTLSLGQ
Trigger: CTGTCCCAGTGAGAGAGTCCACATCTCCACCCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
3UTR CAA 72 bp AGGCGCAGTGGCCGCTGCACATACTGGAACTCATACTaGTTGGGGGTGGAGATGTGGACTCTCTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: RRSGRCTYWNSY*LGVEMWTLSLG
Trigger: TCCCAGTGAGAGAGTCCACATCTCCACCCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000388925.8
CDS-3UTR TCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGACACTGCGCCTGACGTaGTCCACCCCGATGGGGACC +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGTLRLT*STPMGT
Trigger: GGTCCCCATCGGGGTGGATCACGTCAGGCGCAGTGT...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp CCCTTGCATTTCATATTTCACAGGCAAACGTCCAAATGTGCAGCGGGACTCAAGATGGCTCCCTGGCTCTaGACCACCGGCTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: PLHFIFHRQTSKCAAGLKMAPWL*TTGSPW
Trigger: CCAGGGTGAGCCGGTGGTGCAGAGCCAGGGAGCCAT...CTTGAGTCCCGCTGCACATTTGGACGTTTGCCTGTGAAATATGAAATGCAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR GCA 90 bp ACAGGCAAACGTCCAAATGTGCAGCGGGACTCAAGGCTGGCTTCATGGCTTGAATGTTGGTATCAGGCCTaGCCATCTCACCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TGKRPNVQRDSRLASWLECWYQA*PSHRRL
Trigger: GAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACA...TTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR GCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCAGTGCCTCAGGGGCTaGCGGGCTGCGGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWQCLRG*RAAEQG
Trigger: ACCCTGCTCCGCAGCCCGGCAGCCCCTGAGGCACTG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGCCAGGCTACGGAGCTTaGGCAGTGCCTCAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGPGYGA*AVPQGL
Trigger: CAGCCCCTGAGGCACTGCGCAAGCTCCGTAGCCTGG...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGCAGCGCCGACGTCCTaGCCACCACGCACTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVAAPTS*PPRTPG
Trigger: TCCGGGAGTGCGTGGTGGGCAGGACGTCGGCGCTGC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCACACCGGGTTCCCCTaGGCGCCGCAGTCGTGGTCG +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWHTGFP*APQSWS
Trigger: CGACCACGACTGCGGCGCCCAGGGGAACCCGGTGTG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
3UTR CAA 72 bp ATCCAGAATGTTCTGAATTCATCCCAGGAGAGGATCTaGGCCGTGTGTGCACTGGCCACGGGCTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: IQNVLNSSQERI*AVCALATGSPI
Trigger: GATGGGAGAGCCCGTGGCCAGTGCACACACGGCCAAGATCCTCTCCTGGGATGAATTCAGAACATTCTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000388925.8
CDS-3UTR TCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGGCCGCAGGAGGTTGTTaGGGTGGTTCAGGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGAAGGC*GGSGLA
Trigger: GGCCAACCCTGAACCACCTCAACAACCTCCTGCGGC...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp TGCTCAGATGTTGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTGGACCCGAGATGCACAGTGTCTTaGTCAGATGTTGGTATCAGG +
Preference number: 4 (lower is better)
Translates to: CSDVGIRPAHLTGGSLDPRCTVS*SDVGIR
Trigger: CCTGATACCAACATCTGAGCAAGACACTGTGCATCT...CGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR GCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGGCTTCTTCCCCAACCTaGAGTGGGTGGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGASSPT*SGWEGG
Trigger: GCCACCCTCCCACCCACTGCAGGTTGGGGAAGAAGC...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGCGCGCTCCACTTCGTTaGACGCGGGTCCGGCGCACA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVRAPLR*TRVRRT
Trigger: TGTGCGCCGGACCCGCGTGCAACGAAGTGGAGCGCG...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp ACAGGCAAACGTCCAAATGTGCAGCGGGACTCAAGGCTGGCTTCATGGCTTGAATCACCGGAGGCTCTCTaGACCCGCATGAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: TGKRPNVQRDSRLASWLESPEAL*TRMSVF
Trigger: AAAGACACTCATGCGGGTCCAGAGAGCCTCCGGTGA...TTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTTTGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGCTCAGACCCAGGGATaGCGCCGTGTGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVAQTQG*RRVGPP
Trigger: TGGGGGTCCCACACGGCGCCATCCCTGGGTCTGAGC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGCCCCGTGGGGAGGCTaGGGATCGCTGCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVAPWGG*GSLLSA
Trigger: TGCAGACAGCAGCGATCCCCAGCCTCCCCACGGGGC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGTGGGCCTCAGGCTCCTaGAGGCTTACGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGWASGS*RLTSSW
Trigger: CCAGCTGCTCGTAAGCCTCCAGGAGCCTGAGGCCCA...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACATGGGCGCCGCAGTCGTaGTCGCAGCCGCATCGCGCG +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTWAPQS*SQPHRA
Trigger: CGCGCGATGCGGCTGCGACCACGACTGCGGCGCCCA...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp AACGTCCAAATGTGCAGCGGGACTCAAGGCTGGCTTCATGGCTTGAAGTTTTGTGGAAGCTCATGTTGGTaGTGCCGCAGCAGAACGGCT +
Preference number: 4 (lower is better)
Translates to: NVQMCSGTQGWLHGLKFCGSSCW*CRSRTA
Trigger: AGCCGTTCTGCTGCGGCATCACCAACATGAGCTTCC...ACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGGACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR TCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGCGATGCCTAAGCCCTaGGAGGTGGACAGGGCCACG +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVAMPKP*EVDRAT
Trigger: CGTGGCCCTGTCCACCTCTCAGGGCTTAGGCATCGC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGTGGGACCCCCAGGGTaGAGGCCTCGCTGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCVGPPG*RPRCSS
Trigger: AGAGCTACAGCGAGGCCTTCACCCTGGGGGTCCCAC...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGATGGCTCCCTGGCTCTaGACCACCGGCTCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVMAPWL*TTGSPW
Trigger: CCAGGGTGAGCCGGTGGTGCAGAGCCAGGGAGCCAT...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGGGACGATCTCGATCATaGCTGCTGTGTCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGGRSRS*LLCPGA
Trigger: GGCCCCAGGACACAGCAGGCATGATCGAGATCGTCC...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCCACATGCTCCCCGATaGGTCCCGCTCCCCAAACGC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWPHAPR*VPLPKR
Trigger: GCGTTTGGGGAGCGGGACGCATCGGGGAGCATGTGG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGGCTGGCGCTCTGGGTaGTGCTTTCCAGGTTCCCGC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWGWRSG*CFPGSR
Trigger: GCGGGAACCTGGAAAGCAGCACCCAGAGCGCCAGCC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp CGGGACTCAAGGCTGGCTTCATGGCTTGAAGTTTTGTGTGTTAGAAAAAGATGCACCAGGCTCCCTGTGTaGGGCTGGAAAGCGGGGACA +
Preference number: 4 (lower is better)
Translates to: RDSRLASWLEVLCVRKRCTRLPV*GWKAGT
Trigger: TGTCCCCGCTTTCCAGCCCCACACAGGGAGCCTGGT...GCATCTTTTTCTAACACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGACAGAACGACCCAGATaGGCTCAGCCTCCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWTERPR*AQPPRG
Trigger: CCCCCGGGGAGGCTGAGCCCATCTGGGTCGTTCTGT...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGCGTGATCCACCCCGATaGGGACCCTCCTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVRDPPR*GPSCRR
Trigger: ACGCCGACAGGAGGGTCCCCATCGGGGTGGATCACG...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGATGCCTGCTGTGTCCTaGGGCCCAGAAGACAAGGCC +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGMPAVS*GPEDKA
Trigger: GGCCTTGTCTTCTGGGCCCCAGGACACAGCAGGCAT...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGAACTGGACCTCTGGTaGCCTCGGGAGGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWELDLW*PREGPG
Trigger: GCCTGGACCCTCCCGAGGCCACCAGAGGTCCAGTTC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGGTCATCATCGTCAGCTaGGGGCCAGTCTCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGVIIVS*GPVSSG
Trigger: TCCCGAGGAGACTGGCCCCCAGCTGACGATGATGAC...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGTCGTACACGGAGACTaGCAGCGCCGACGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVVVHGD*QRRRPA
Trigger: GGCAGGACGTCGGCGCTGCCAGTCTCCGTGTACGAC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGTCATCCCCGTAGGTaGAGGACGACGAGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCGHPRR*RTTRPA
Trigger: TGCCGGCCTCGTCGTCCTCCACCTACGGGGATGACC...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGTCTGGCCCCATCTGTaGAACGGGCTGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVVWPHL*NGLALW
Trigger: CCAGAGCGCCAGCCCGTTCCACAGATGGGGCCAGAC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTCACCCACCCAGCTGGTaGTGGAGTCCGGGACCTTCA +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCHPPSW*WSPGPS
Trigger: TGAAGGTCCCGGACTCCATCACCAGCTGGGTGGGTG...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACACGGCCACTATGTCTCTaGGGGGCCGGAGTCTGGCCC +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTRPLCL*GAGVWP
Trigger: GGGCCAGACTCCGGCCCCTCAGAGACATAGTGGCCG...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGCGGGTGAGGCGCAGTaGCCGCTGCACATACTGGAA +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWAGEAQ*PLHILE
Trigger: TTCCAGTATGTGCAGCGGCCACTGCGCCTCACCCGC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGGGATGGCGCCGTGTaGGACCCCCAGGGTGAAGGC +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTRDGAV*DPQGEG
Trigger: GCCTTCACCCTGGGGGTCCCACACGGCGCCATCCCT...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGAGCGGGACAGTGCCGTaGATCCCACCCTGGATGTCC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWSGTVP*IPPWMS
Trigger: GGACATCCAGGGTGGGATCCACGGCACTGTCCCGCT...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGAGCAGCTGGAAAGCTaGCTTGGCCACCGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWEQLES*LGHRVR
Trigger: CCTGACCCGGTGGCCAAGCCAGCTTTCCAGCTGCTC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACACCACATCAAAGCGGGTaGGGCGCAGTGGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTPHQSG*GAVAAA
Trigger: TGCAGCGGCCACTGCGCCTCACCCGCTTTGATGTGG...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGTGGGCTGTGGGTGCTaGCGTTGTAGAAGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVVGCGC*RCRSEW
Trigger: CCACTCGCTTCTACAACGTCAGCACCCACAGCCCAC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTTCAGCTTCACGTCCTaGTGTAAAGGCCCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVFSFTS*CKGPGA
Trigger: GGCCCCGGGGCCTTTACAGCAGGACGTGAAGCTGAA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCCCAGGAGAGGATCTTaGCCGTGTGTGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWPRRGS*PCVHWP
Trigger: TGGCCAGTGCACACACGGCCAAGATCCTCTCCTGGG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGACCATGGCCAACCTaGATAAGGCCACCACGCCAG +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCGPWPT*IRPPRQ
Trigger: CTGGCGTGGTGGCCTTATCCAGGTTGGCCATGGTCC...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGAGGTGGTTCAGGGTTaGCCCCATGACGTCCCCGAT +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCEVVQG*PHDVPD
Trigger: ATCGGGGACGTCATGGGGCCAACCCTGAACCACCTC...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGGTCTGCAGAACCTTCTaGTTGGTCCTGTGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGVCRTF*LVLCSS
Trigger: CGAGCTGCACAGGACCAACCAGAAGGTTCTGCAGAC...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGCTGGAAAGCTGGCTTaGCCACCGGGTCAGGCACAT +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVAGKLA*PPGQAH
Trigger: ATGTGCCTGACCCGGTGGCCAAGCCAGCTTTCCAGC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAGCAGGCGGCAGGCGCTaGCGTAGACCACCCCGTCGG +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLAGGRR*RRPPRR
Trigger: CCGACGGGGTGGTCTACGCCAGCGCCTGCCGCCTGC...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
3UTR CAA 72 bp GTGTTAGAAAAAGATGCACAGTGTCTTGCTCAGATGTaGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: VLEKDAQCLAQM*VSGLPISPEAL
Trigger: GAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGCAAGACACTGTGCATCTTTTTCTAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR TCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGCCAGTCCCGTTTCGGTaGAGGCAAACCCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVPVPFR*RQTQSP
Trigger: AGGACTCTGGGTTTGCCTTCACCGAAACGGGACTGG...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTACCCTCCTGTCGGCGTaGTTCTCCTCAGGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCTLLSA*FSSGCL
Trigger: CAAACACCCTGAGGAGAATCACGCCGACAGGAGGGT...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGCTGGTGGAGATCCATaGCCTGGTGTTCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWAGGDP*PGVLMP
Trigger: GGGCATCAGAACACCAGGTCATGGATCTCCACCAGC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTCGGTGGAAAAGCCAATaGACTGGACCTCTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCRWKSQ*TGPLVA
Trigger: GGCCACCAGAGGTCCAGTTCATTGGCTTTTCCACCG...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTCAGGACAAAGGCTGTaGGCCACATGCTCCCCGATG +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVSGQRL*ATCSPM
Trigger: CATCGGGGAGCATGTGGCTCACAGCCTTTGTCCTGA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGATCTCGATCATGCCTaGTGTGTCCTGGGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWDLDHA*CVLGPR
Trigger: TCTGGGCCCCAGGACACAGCAGGCATGATCGAGATC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAGATCTTGGCCGTGTGTaGACTGGCCACGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTDLGRV*TGHGLS
Trigger: GGAGAGCCCGTGGCCAGTGCACACACGGCCAAGATC...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCCATCGGCCTGCTGCTaGTGGATGATCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWPSACC*WMIQLL
Trigger: CAAGAGCTGGATCATCCAGCAGCAGCAGGCCGATGG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGAAGGAGCCATCGGCCTaGTGCTGCTGGATGATCCAG +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWKEPSA*CCWMIQ
Trigger: CTGGATCATCCAGCAGCAGCAGGCCGATGGCTCCTT...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACACCTTGTTCAGGACCCTaGCCACGGCCAGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTPCSGP*PRPGRS
Trigger: GCTCCTTCCTGGCCGTGGGCAGGGTCCTGAACAAGG...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACACGGAGCTTGCGCAGTaGCTCAGGGGCTGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYTELAQ*LRGCRA
Trigger: AGCCCGGCAGCCCCTGAGGCACTGCGCAAGCTCCGT...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTTGGAAGACCCTGCATaGAGCCACCTGGTGCACACC +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVLEDPA*SHLVHT
Trigger: GGTGTGCACCAGGTGGCTGCATGCAGGGTCTTCCAA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACATGGCGCTCTGGGTGCTaGTTTCCAGGTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTWRSGC*FPGSRC
Trigger: GCAGCGGGAACCTGGAAAGCAGCACCCAGAGCGCCA...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTCCGTGGATCCCACCCTaGATGTCCTTGTTCAGGACC +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCPWIPP*MSLFRT
Trigger: GGTCCTGAACAAGGACATCCAGGGTGGGATCCACGG...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGCCTCGCTTTGTCAGTaGAGCCTCTCTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWASLCQ*SLSPPL
Trigger: CAGAGGAGGAGAGAGGCTCCACTGACAAAGCGAGGC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGAGTGCATTTCGCTGCTaGGACAGCCACTTCACCACA +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGSAFRC*DSHFTT
Trigger: TGTGGTGAAGTGGCTGTCCCAGCAGCGAAATGCACT...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGAGGCTTACGAGCAGCTaGAAAGCTGGCTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWRLTSS*KAGLAT
Trigger: GGTGGCCAAGCCAGCTTTCCAGCTGCTCGTAAGCCT...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTCTGCATGCAGCCACCTaGTGCACACCTCCAGCATCA +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCLHAAT*CTPPAS
Trigger: TGATGCTGGAGGTGTGCACCAGGTGGCTGCATGCAG...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGACGTCAGGCACCGGCTaGGGATCTCATCAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGTSGTG*GSHQSR
Trigger: TCTACTTTGATGAGATCCCCAGCCGGTGCCTGACGT...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTCGTTGTAGAAGCGAGTaGCCTCGAAGGCGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCRCRSE*PRRRVR
Trigger: ACGAACCCGCCTTCGAGGCCACTCGCTTCTACAACG...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACACAGTTCCCGGGCGAGTaGGCTGTGGGTGCTGACGTT +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTQFPGE*AVGADV
Trigger: AACGTCAGCACCCACAGCCCACTCGCCCGGGAACTG...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACACCGGGACCTTCACACTaGGTGTCCCCTCACCAGATG +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTPGPSH*VSPHQM
Trigger: CATCTGGTGAGGGGACACTCAGTGTGAAGGTCCCGG...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGACACGGGCATCATTGTaGGCTCGCACAGCCACATCA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVTRASL*ARTATS
Trigger: TGATGTGGCTGTGCGAGCTCACAATGATGCCCGTGT...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGGGTCCAGGCCACAATaGCAGACTCATTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWGSRPQ*QTHWMA
Trigger: AGCCATCCAATGAGTCTGTCATTGTGGCCTGGACCC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGTCTCCACCTCAGGGCTaGGCTGCTGGGTTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWSPPQG*AAGFSE
Trigger: TTCAGAAAACCCAGCAGCTCAGCCCTGAGGTGGAGA...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GAGGGAGTTATAAGAGGCACAAAGCCCTTGCATTTCATATTTCACAGGCAAACGCTTATGAGCACTCGGTaGTGGGGTCTGTACACAGGC +
Preference number: 4 (lower is better)
Translates to: EGVIRGTKPLHFIFHRQTLMSTR*WGLYTG
Trigger: GCCTGTGTACAGACCCCAGCACCGAGTGCTCATAAG...CGTTTGCCTGTGAAATATGAAATGCAAGGGCTTTGTGCCTCTTATAACTCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGGGGAGGGCTCGGCGATaGCTAAGCCCTGAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQGRARR*LSPERW
Trigger: CCACCTCTCAGGGCTTAGGCATCGCCGAGCCCTCCC...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTAGCGGGATCTTGACCTaGTCCCCACGGATGATGAGA +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCSGILT*SPRMMR
Trigger: TCTCATCATCCGTGGGGAGCAGGTCAAGATCCCGCT...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGCCCAACAAACTGGATaGCCTTGGGAACCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWAQQTG*PWEPRA
Trigger: AGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GAGGGAGTTATAAGAGGCACAAAGCCCTTGCATTTCATATTTCACAGGCAAACGTCCCTTTATCCAGGATaGCTCCCTGGCTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: EGVIRGTKPLHFIFHRQTSLYPG*LPGSAP
Trigger: TGGTGCAGAGCCAGGGAGCCATCCTGGATAAAGGGA...CGTTTGCCTGTGAAATATGAAATGCAAGGGCTTTGTGCCTCTTATAACTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTCCCTTTATCCAGGATaGCTCCCTGGCTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVSLYPG*LPGSAP
Trigger: TGGTGCAGAGCCAGGGAGCCATCCTGGATAAAGGGA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGTCCCAAAGGTATACCTaGCCCGCACAGTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWSQRYT*PAQCLS
Trigger: AGACAGGCACTGTGCGGGCCAGGTATACCTTTGGGA...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTCAGTGCCATCACCTTaGTCTCCAGCCACACGTGCT +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVSVPSP*SPATRA
Trigger: AGCACGTGTGGCTGGAGACCAAGGTGATGGCACTGA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGTGTCCCCTCACCAGATaGGTCACTGATGTTGAGACA +
Preference number: 4 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGCPLTR*VTDVET
Trigger: TGTCTCAACATCAGTGACCCATCTGGTGAGGGGACA...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTTGGGGGTGGAGATGTaGACTCTCTCACTGGGACAG +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVLGVEM*TLSLGQ
Trigger: CTGTCCCAGTGAGAGAGTCCACATCTCCACCCCCAA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGATGGCTCTGGACCATaGCCAACCTGGATAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVDGSGP*PTWIRP
Trigger: TGGCCTTATCCAGGTTGGCCATGGTCCAGAGCCATC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTTCGGAATTCACCCATaGAGCCCCAGCCGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVFGIHP*SPSRWK
Trigger: TTTCCACCGGCTGGGGCTCCATGGGTGAATTCCGAA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACATCGGCCTGCTGCTGCTaGATGATCCAGCTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTSACCC*MIQLLA
Trigger: CGCCAAGAGCTGGATCATCCAGCAGCAGCAGGCCGA...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTTTGACAGGCTCCAGTaGGTGACCCCATCTCGCATG +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVFDRLQ*VTPSRM
Trigger: CATGCGAGATGGGGTCACCCACTGGAGCCTGTCAAA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGCAGAACCTTCTGGTTaGTCCTGTGCAGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWAEPSG*SCAARR
Trigger: CCTTCGAGCTGCACAGGACCAACCAGAAGGTTCTGC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAAGGGCTCAGAAGCCCTaGCCTGTGGGCCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLRAQKP*PVGPHH
Trigger: GTGGTGGGGGCCCACAGGCCAGGGCTTCTGAGCCCT...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
3UTR CAA 72 bp GCATGTGGTTGTAGGATTATCTCAAGGTGCAGGTGTTaGACATCCATAAACCCTCCTCCCCACCACTCTGAA +
Preference number: 4 (lower is better)
Translates to: ACGCRIISRCRC*TSINPPPHHSE
Trigger: TTCAGAGTGGTGGGGAGGAGGGTTTATGGATGTCAAACACCTGCACCTTGAGATAATCCTACAACCACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000388925.8
ENST00000594249.5
CDS-3UTR TCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGCCATCACACTGCGCCTaGCGTGATCCACCCCGATGG +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQPSHCA*RDPPRW
Trigger: CCATCGGGGTGGATCACGTCAGGCGCAGTGTGATGG...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACACACGTCCCAGGAATTTaGCAGGCTCCAGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTHVPGI*QAPVGD
Trigger: GTCACCCACTGGAGCCTGTCAAATTCCTGGGACGTG...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGAGAGACCCTGTCACTaGAGCTCAAGAATGTGCCCT +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWERPCH*SSRMCP
Trigger: AGGGCACATTCTTGAGCTTCAGTGACAGGGTCTCTC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAGCCACGCAGGTGTCCTaGGTGGAGGAGAAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLATQVS*VEEKPP
Trigger: TGGGGGCTTCTCCTCCACTCAGGACACCTGCGTGGC...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGCTGTCAGCGGGACAGTaGCGTGGATCCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQLSAGQ*RGSHPG
Trigger: TCCAGGGTGGGATCCACGGCACTGTCCCGCTGACAG...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTCATATTGGAAGACCCTaGATGCAGCCACCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCHIGRP*MQPPGA
Trigger: TGCACCAGGTGGCTGCATGCAGGGTCTTCCAATATG...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGTCTTTCACTCAACCGGCAAAGTCAGCGCAGAAAAGAAATCTTAATGTACCTTCCCAAAGGTATACCTaGCCCGCACAGTGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VSFTQPAKSAQKRNLNVPSQRYT*PAQCLS
Trigger: AGACAGGCACTGTGCGGGCCAGGTATACCTTTGGGA...AGGTACATTAAGATTTCTTTTCTGCGCTGACTTTGCCGGTTGAGTGAAAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGACCAGGCTCCCTGTGTaGGGCTGGAAAGCGGGGACA +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQTRLPV*GWKAGT
Trigger: TGTCCCCGCTTTCCAGCCCCACACAGGGAGCCTGGT...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGCCTCAGGGTGTTTGCTaGACCTCCCATCCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQPQGVC*TSHPGS
Trigger: GCTGCCGGGATGGGAGGTCCAGCAAACACCCTGAGG...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGCCGCTGCACATACTaGAACTCATACTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCGRCTY*NSYLLG
Trigger: CCCCAACAAGTATGAGTTCCAGTATGTGCAGCGGCC...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCTCCCATCTTGCTGGTaGAGATCCATGACCTGGTGT +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWLPSCW*RSMTWC
Trigger: ACACCAGGTCATGGATCTCCACCAGCAAGATGGGAG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTCTCATTGGATGGCTCTaGACCATGGCCAACCTGGAT +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCLIGWL*TMANLD
Trigger: ATCCAGGTTGGCCATGGTCCAGAGCCATCCAATGAG...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGGACAGACTCATTGGATaGCTCTGGACCATGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVDRLIG*LWTMAN
Trigger: GTTGGCCATGGTCCAGAGCCATCCAATGAGTCTGTC...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACTCACAAACAGCCCCGTaGGGAGGCTGGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYSQTAP*GGWGSL
Trigger: CAGCGATCCCCAGCCTCCCCACGGGGCTGTTTGTGA...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGCAGCCGTCCCCCTTaGCACTCACAAACAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQSSRPP*HSQTAP
Trigger: CGGGGCTGTTTGTGAGTGCCAAGGGGGACGGCTGCT...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTACCACTCTGAAAGGCTaGGCTGTAGACGAAGACAGG +
Preference number: 4 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCTTLKG*AVDEDR
Trigger: CCTGTCTTCGTCTACAGCCCAGCCTTTCAGAGTGGT...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCAGGCACATTGTAGGTaGCATCAATCTGCATCAGGC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWQAHCR*HQSASG
Trigger: GCCTGATGCAGATTGATGTCACCTACAATGTGCCTG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AAGATGCACAGTGTCTTGCTCAGATGTTGGTATCAGGCCTGCCCATCTCACCGGTGTGTTAGAAAAAGATaGACAGTGTCTTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: KMHSVLLRCWYQACPSHRCVRKR*TVSCSD
Trigger: ATCTGAGCAAGACACTGTGCATCTTTTTCTAACACA...CCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGCAAGACACTGTGCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR GCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACTCTCCTCAGGGTGTTTaGTGGACCTCCCATCCCGGC +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYSPQGV*WTSHPG
Trigger: GCCGGGATGGGAGGTCCAGCAAACACCCTGAGGAGA...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAGGATGCCCAACAAACTaGATGCCCTTGGGAACCGAG +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTGCPTN*MPLGTE
Trigger: CTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCC...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCCACACACATCTTCTTaGTCACATGGCGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWPHTSS*SHGVCQ
Trigger: CTGGCAAACGCCATGTGACCAAGAAGATGTGTGTGG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGACTCTCTCACTaGGACAGAAGAATGCGCTGT +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVCGLSH*DRRMRC
Trigger: ACAGCGCATTCTTCTGTCCCAGTGAGAGAGTCCACA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGGAACTCATACTTGTTaGGGGTGGAGATGTGGACTC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWGTHTC*GWRCGL
Trigger: GAGTCCACATCTCCACCCCCAACAAGTATGAGTTCC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCGCAGGTGTCCTGAGTaGAGGAGAAGCCCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYRRCPE*RRSPQV
Trigger: CACTTGGGGGCTTCTCCTCCACTCAGGACACCTGCG...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCCTGGTAGTCCAGGTTaGTGGAGGCCAGGGAGACAG +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYPGSPG*WRPGRQ
Trigger: CTGTCTCCCTGGCCTCCACCAACCTGGACTACCAGG...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACAACGGGCTGGCGCTCTaGGTGCTGCTTTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYNGLAL*VLLSRF
Trigger: GAACCTGGAAAGCAGCACCCAGAGCGCCAGCCCGTT...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGGCCGAGACCACTGACTaGGAGACCCTGTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQAETTD*ETLSLK
Trigger: CTTCAGTGACAGGGTCTCTCAGTCAGTGGTCTCGGC...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAACACCTCAGCGCAGGTaGCCATGTAGTTGTAGACAC +
Preference number: 4 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTTPQRR*PCSCRH
Trigger: GTGTCTACAACTACATGGGCACCTGCGCTGAGGTGT...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGGGAGAAGCCCCCAAGTaGATTTCGCTGCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQGEAPK*ISLLGQ
Trigger: CTGTCCCAGCAGCGAAATGCACTTGGGGGCTTCTCC...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGTATTCAGCCAAGGCCTaGAGAGCCACGCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQYSAKA*RATQVS
Trigger: GGACACCTGCGTGGCTCTGCAGGCCTTGGCTGAATA...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGGAGGCTGGGGATCGCTaGTGTCTGCAGAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQEAGDR*CLQNLL
Trigger: CAGAAGGTTCTGCAGACAGCAGCGATCCCCAGCCTC...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGCATGCAGCCACCTGGTaGACACCTCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQHAATW*TPPASP
Trigger: AGGTGATGCTGGAGGTGTGCACCAGGTGGCTGCATG...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGTCTTTCACTCAACCGGCAAAGTCAGCGCAGAAAAGAAATCTTAATGTACCTAGCGGGACTCAAGGCTaGCTTCATGGCTTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: VSFTQPAKSAQKRNLNVPSGTQG*LHGLKF
Trigger: AAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCT...AGGTACATTAAGATTTCTTTTCTGCGCTGACTTTGCCGGTTGAGTGAAAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACAATGAACTGGACCTCTaGTGGCCTCGGGAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYNELDL*WPREGP
Trigger: TGGACCCTCCCGAGGCCACCAGAGGTCCAGTTCATT...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACAGCTATAAGGGTCCATaGCCAGGGGCGCAGCAGACT +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYSYKGP*PGAQQT
Trigger: AGTCTGCTGCGCCCCTGGCCATGGACCCTTATAGCT...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACATGCTGATCGGCCGCTaGGTCATCATCGTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYMLIGR*VIIVSW
Trigger: CCAGCTGACGATGATGACCCAGCGGCCGATCAGCAT...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACATCTGTGGAACGGGCTaGCGCTCTGGGTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYICGTG*RSGCCF
Trigger: AAAGCAGCACCCAGAGCGCCAGCCCGTTCCACAGAT...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAGGAAGCTCATGTTGGTaGTGCCGCAGCAGAACGGCT +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLGSSCW*CRSRTA
Trigger: AGCCGTTCTGCTGCGGCATCACCAACATGAGCTTCC...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGCTTATGAGCACTCGGTaGTGGGGTCTGTACACAGGC +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQLMSTR*WGLYTG
Trigger: GCCTGTGTACAGACCCCAGCACCGAGTGCTCATAAG...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGTGGCGTTTGCCAGGATaGCCAACAAACTGGATGCCC +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQWRLPG*PTNWMP
Trigger: GGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCA...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTACGGGCTCTCCCATCTTaGTGGTGGAGATCCATGACC +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLRALPS*WWRSMT
Trigger: GGTCATGGATCTCCACCAGCAAGATGGGAGAGCCCG...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACGCAGACTCCAGGAAGTaGCTCGCTTTGTCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYADSRK*LALSVE
Trigger: CTCCACTGACAAAGCGAGGCACTTCCTGGAGTCTGC...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGCCAAGTGCATTTCGCTaGTGGGACAGCCACTTCACC +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQPSAFR*WDSHFT
Trigger: GGTGAAGTGGCTGTCCCAGCAGCGAAATGCACTTGG...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGGGGATCGCTGCTGTCTaGAGAACCTTCTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQGIAAV*RTFWLV
Trigger: GACCAACCAGAAGGTTCTGCAGACAGCAGCGATCCC...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TTAATGTACCTGATGTTGAGACAATGCCAAATCCATGTTTCGGGGAAGAAAGTCGTCTTGCTCAGATGTTaGTATCAGGCCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: LMYLMLRQCQIHVSGKKVVLLRC*YQACPS
Trigger: AGATGGGCAGGCCTGATACCAACATCTGAGCAAGAC...GACTTTCTTCCCCGAAACATGGATTTGGCATTGTCTCAACATCAGGTACATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR GCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAAGGCGCAGTGGCCGCTaGACATACTGGAACTCATAC +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLRRSGR*TYWNSY
Trigger: GTATGAGTTCCAGTATGTGCAGCGGCCACTGCGCCT...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACTTCTGGTTGGTCCTGTaGAGCTCGAAGGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYFWLVL*SSKVSW
Trigger: CCAGGAAACCTTCGAGCTGCACAGGACCAACCAGAA...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAGAAAAGCCAATGAACTaGACCTCTGGTGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLEKPMN*TSGGLG
Trigger: CCCGAGGCCACCAGAGGTCCAGTTCATTGGCTTTTC...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGTCAAGACAAAGACGTTaGGTGCAAAGTGGATCATGT +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWSRQRR*VQSGSC
Trigger: ACATGATCCACTTTGCACCCAACGTCTTTGTCTTGA...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGGTACTAGGTAGTCGGTaGTCTCTCTCTCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQVLGSR*SLSPPQ
Trigger: CTGAGGTGGAGAGAGAGACCACCGACTACCTAGTAC...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR TCA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTCAATATCCTGGAGTaGTCATTTACCAGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWVNILE*SFTRVF
Trigger: GAAAACTCTGGTAAATGATCACTCCAGGATATTGAC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp TTAATGTACCTGATGTTGAGACAATGCCAAATCCATGTTTCGGGGAAGAAAGTCCTGATGTTGAGACAATaGCAAATCCATGTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: LMYLMLRQCQIHVSGKKVLMLRQ*QIHVSG
Trigger: CCCCGAAACATGGATTTGGCATTGTCTCAACATCAG...GACTTTCTTCCCCGAAACATGGATTTGGCATTGTCTCAACATCAGGTACATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR GCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTACTCTTCATCCCCATGTaGTTGTCAAGGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLLFIPM*LSRSSC
Trigger: GCAGCTGCTCCTTGACAAGCACATGGGGATGAAGAG...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGAGGATTATCTCAAGGTaGAGGTGTTTGACATCCATA +
Preference number: 4 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVRIISR*RCLTSI
Trigger: TATGGATGTCAAACACCTGCACCTTGAGATAATCCT...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTaGGTGTGTGGGTATGAATGG +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLTTGTS*VCGYEW
Trigger: CCATTCATACCCACACACCCAGCTTGTGCCTGTGGT...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTATGGTCACATGGCGTTTaGCAGGATGCCCAACAAACT +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLWSHGV*QDAQQT
Trigger: AGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCA...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAAAAGCTGCGAGCCTGTaGGAAGGACTTCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLKAASL*EGLQDK
Trigger: TTTGTCCTGAAGTCCTTCGCACAGGCTCGCAGCTTT...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTACAAACTGGATGCCCTTaGGAACCGAGAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLQTGCP*EPRASC
Trigger: ACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTG...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAATCTTCTTGGTCACATaGCGTTTGCCAGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLIFLVT*RLPGCP
Trigger: TGGGCATCCTGGCAAACGCCATGTGACCAAGAAGAT...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCTGATGTTGAGACAATaGCAAATCCATGTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYLMLRQ*QIHVSG
Trigger: CCCCGAAACATGGATTTGGCATTGTCTCAACATCAG...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR GCA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACGACAAAGACGTTGGGTaGAAAGTGGATCATGTTCTG +
Preference number: 4 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYDKDVG*KVDHVL
Trigger: CAGAACATGATCCACTTTGCACCCAACGTCTTTGTC...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTACAGCATAGGACAAGATaGCATATTCAGCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLQHRTR*HIQPRP
Trigger: AGGCCTTGGCTGAATATGCCATCTTGTCCTATGCTG...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CCA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTATACGTCACTGAAACCTaGTTTTCGAAGAAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLYVTET*FSKKVS
Trigger: CGAGACCTTCTTCGAAAACCAGGTTTCAGTGACGTA...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS CCA 90 bp GAGAGCACGGAACCGCACGCACGTCAGGCACCGGCTGGGGATCTGTaGGGCAGCGGCGGGCGCAGGCTCGACCCGGGCCAGGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: ESTEPHARQAPAGDL*GSGGRRLDPGQEAR
Trigger: CCGGGCCTCCTGGCCCGGGTCGAGCCTGCGCCCGCCGCTGCCCCACAGATCCCCAGCCGGTGCCTGACGTGCGTGCGGTTCCGTGCTCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597709.1
CDS CCA 90 bp CGCACTCCCGGAGAGCACGGAACCGCACGCACGTCAGGCACCGGCTaGGGATCTGTGGGGCAGCGGCGGGCGCAGGCTCGACCCGGGCCA +
Preference number: 5 (lower is better)
Translates to: RTPGEHGTARTSGTG*GSVGQRRAQARPGP
Trigger: TGGCCCGGGTCGAGCCTGCGCCCGCCGCTGCCCCACAGATCCCCAGCCGGTGCCTGACGTGCGTGCGGTTCCGTGCTCTCCGGGAGTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597709.1
CDS TCA 90 bp CAGCGGCGGGCGCAGGCTCGACCCGGGCCAGGAGGCCCGGGGCGCTaGGCTCAGGCCCAGAACTGGCTGATTTCAGGGATACCCAGGACG +
Preference number: 5 (lower is better)
Translates to: QRRAQARPGPGGPGR*AQAQNWLISGIPRT
Trigger: CGTCCTGGGTATCCCTGAAATCAGCCAGTTCTGGGCCTGAGCTCAGCGCCCCGGGCCTCCTGGCCCGGGTCGAGCCTGCGCCCGCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597709.1
CDS TCA 90 bp TGTAGAAGCGAGTGGCCTCGAAGGCTACGGGACGAGGGTGGCGGGTaGCCAAGTGCAGGCGCGACGGGTCAGGGACCGGGCCGGGCCGGG +
Preference number: 5 (lower is better)
Translates to: CRSEWPRRLRDEGGG*PSAGATGQGPGRAG
Trigger: CCCGGCCCGGCCCGGTCCCTGACCCGTCGCGCCTGCACTTGGTCACCCGCCACCCTCGTCCCGTAGCCTTCGAGGCCACTCGCTTCTACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601782.5
CDS TCA 90 bp ACGCGGGTCCGGCGCACAGTTCCCGGGCGAGTGGGCTGTGGGTGCTaGCGTTGTAGAAGCGAGTGGCCTCGAAGGCTACGGGACGAGGGT +
Preference number: 5 (lower is better)
Translates to: TRVRRTVPGRVGCGC*RCRSEWPRRLRDEG
Trigger: ACCCTCGTCCCGTAGCCTTCGAGGCCACTCGCTTCTACAACGTCAGCACCCACAGCCCACTCGCCCGGGAACTGTGCGCCGGACCCGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601782.5
CDS GCA 90 bp CACACGCGCGCGTGCGCCCGCGCACAGCTGTTCGCTGGTGGGTGTTaGGTGGGCCAGGGTGGAGGGAGGATGAATGTCCCACTTTGTCCC +
Preference number: 5 (lower is better)
Translates to: HTRACARAQLFAGGC*VGQGGGRMNVPLCP
Trigger: GGGACAAAGTGGGACATTCATCCTCCCTCCACCCTGGCCCACGCAACACCCACCAGCGAACAGCTGTGCGCGGGCGCACGCGCGCGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS TCA 90 bp GTCCCTAAGGTGGCCTCAGGAGCCCTGACACCGGTGCAAGGTGTCTaGGGACCACAGCACCTGGCCACCACCGAGGTTGACACTGTACCC +
Preference number: 5 (lower is better)
Translates to: VPKVASGALTPVQGV*GPQHLATTEVDTVP
Trigger: GGGTACAGTGTCAACCTCGGTGGTGGCCAGGTGCTGTGGTCCTCAGACACCTTGCACCGGTGTCAGGGCTCCTGAGGCCACCTTAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601637.1
CDS TCA 90 bp GGTGCAAGGTGTCTGAGGACCACAGCACCTGGCCACCACCGAGGTTaGCACTGTACCCATCCACACCACTCTGCTGAGCAGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GARCLRTTAPGHHRG*HCTHPHHSAEQPWG
Trigger: TCCCCAGGGCTGCTCAGCAGAGTGGTGTGGATGGGTACAGTGTCAACCTCGGTGGTGGCCAGGTGCTGTGGTCCTCAGACACCTTGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601637.1
CDS CCA 90 bp GGCCAGCTGCCACCTCCTCATTTAGATGGCAGAACCCCAACTGGATaGGGGACACATGGCCCAGGCCTGGCACTGTACAACTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GQLPPPHLDGRTPTG*GTHGPGLALYNSAS
Trigger: GGAGGCAGAGTTGTACAGTGCCAGGCCTGGGCCATGTGTCCCCCATCCAGTTGGGGTTCTGCCATCTAAATGAGGAGGTGGCAGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS CCA 90 bp CCTGCTCTCAGCAGGGCAGCCGTTAGGAAGAGAAGCCGCTCTGACTaGCCAGGAGAGGAGAAAGATTCCTATGGGGCCGCCAGGACTTCG +
Preference number: 5 (lower is better)
Translates to: PALSRAAVRKRSRSD*PGEEKDSYGAARTS
Trigger: CGAAGTCCTGGCGGCCCCATAGGAATCTTTCTCCTCTCCTGGCCAGTCAGAGCGGCTTCTCTTCCTAACGGCTGCCCTGCTGAGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS CCA 90 bp TCCCTGGGCCTCAGGCTCCTGGAGGCTTACGAGCAGCTGGAAAGCTaGCTTGGCCACCGGGTCAGGCACATTGTAGGTGACATCAATCGC +
Preference number: 5 (lower is better)
Translates to: SLGLRLLEAYEQLES*LGHRVRHIVGDINR
Trigger: GCGATTGATGTCACCTACAATGTGCCTGACCCGGTGGCCAAGCCAGCTTTCCAGCTGCTCGTAAGCCTCCAGGAGCCTGAGGCCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682780.1
CDS CCA 90 bp CTCAGGCCAGCTGCCACCTCCTCATTTAGATGGCAGAACCCCAACTaGATGGGGGACACATGGCCCAGGCCTGGCACTGTACAACTCTGC +
Preference number: 5 (lower is better)
Translates to: LRPAATSSFRWQNPN*MGDTWPRPGTVQLC
Trigger: GCAGAGTTGTACAGTGCCAGGCCTGGGCCATGTGTCCCCCATCCAGTTGGGGTTCTGCCATCTAAATGAGGAGGTGGCAGCTGGCCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS-3UTR CAA 90 bp ATCTCACCGGAGGCTCTCTGGACCCGCATGAGTGTCTTTCACTCAACCGGCAAACGGGAGCCGAGGATCTaGGTTGTTCTGAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: ISPEALWTRMSVFHSTGKREPRI*VVLRTG
Trigger: CCCTGTCCTCAGAACAACCAAGATCCTCGGCTCCCG...TTTGCCGGTTGAGTGAAAGACACTCATGCGGGTCCAGAGAGCCTCCGGTGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS CCA 90 bp AACTCTGCCTCCTTTCCCCTTCCAGTGGACCACAGTGATGGGCTCTaGGTGTCCATGTGCGGTAAGAGGGGAGTAGCTTGTGTCAGACCA +
Preference number: 5 (lower is better)
Translates to: NSASFPLPVDHSDGL*VSMCGKRGVACVRP
Trigger: TGGTCTGACACAAGCTACTCCCCTCTTACCGCACATGGACACCCAGAGCCCATCACTGTGGTCCACTGGAAGGGGAAAGGAGGCAGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS-3UTR CAA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGTGGATGATCCAGCTCTaGGCGGCAGCCAGCTCCCGG +
Preference number: 5 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGWMIQL*AAASSR
Trigger: CCGGGAGCTGGCTGCCGCCAAGAGCTGGATCATCCA...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGCCAGGCTACGGAGCTaGCGCAGTGCCTCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCARLRS*RSASGA
Trigger: AGCCCCTGAGGCACTGCGCAAGCTCCGTAGCCTGGC...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAGCGCGCTCCACTTCGTaGCACGCGGGTCCGGCGCAC +
Preference number: 5 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTARSTS*HAGPAH
Trigger: GTGCGCCGGACCCGCGTGCAACGAAGTGGAGCGCGC...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GCTCAGATGTTGGTATCAGGCCTGCCCATCTCACCGGAGGCTCTCTGGACCCGCTCATGGCTTGAAGTTTaGTGTGTTAGAAAAAGATGC +
Preference number: 5 (lower is better)
Translates to: AQMLVSGLPISPEALWTRSWLEV*CVRKRC
Trigger: GCATCTTTTTCTAACACACAAAACTTCAAGCCATGA...GCGGGTCCAGAGAGCCTCCGGTGAGATGGGCAGGCCTGATACCAACATCTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CAA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGTTCAGTGCCATCACCTaGGTCTCCAGCCACACGTGC +
Preference number: 5 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGFSAIT*VSSHTC
Trigger: GCACGTGTGGCTGGAGACCAAGGTGATGGCACTGAA...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGTCCCAGGAGAGGATCTaGGCCGTGTGTGCACTGGCC +
Preference number: 5 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWSQERI*AVCALA
Trigger: GGCCAGTGCACACACGGCCAAGATCCTCTCCTGGGA...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGAGCTGGAAAGCTGGCTaGGCCACCGGGTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVSWKAG*ATGSGT
Trigger: TGTGCCTGACCCGGTGGCCAAGCCAGCTTTCCAGCT...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS GCA 90 bp TCTTCTTGGTCACATGGCGTTTGCCAGGATGCCCAACAAACTGGATaGCCTTGGGAACCGAGAGCTTCATGTACACCTGATGTTGAGACA +
Preference number: 5 (lower is better)
Translates to: SSWSHGVCQDAQQTG*PWEPRASCTPDVET
Trigger: TGTCTCAACATCAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593420.5
CDS CCA 90 bp TCGGTGGGTCTTGGGGCGCGACAGTTAATGGGAGGTCCTGAGCCCTaGCCTTATGGAATTTCACGCAGGTATTTGCCTAATACTTACAAA +
Preference number: 5 (lower is better)
Translates to: SVGLGARQLMGGPEP*PYGISRRYLPNTYK
Trigger: TTTGTAAGTATTAGGCAAATACCTGCGTGAAATTCCATAAGGCCAGGGCTCAGGACCTCCCATTAACTGTCGCGCCCCAAGACCCACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593739.1
ENST00000596224.5
CDS-3UTR CAA 90 bp CATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGGTTGGCCGTGATGTTGTaGAGTCCCAGGTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: HLPEFSEMLTTGTSWVCGLAVML*SPRSLK
Trigger: CTTCAGCGACCTGGGACTCAACAACATCACGGCCAA...CCCACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTAGCCGCAGGAGGTTGTaGAGGTGGTTCAGGGTTGGC +
Preference number: 5 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCSRRRL*RWFRVG
Trigger: GCCAACCCTGAACCACCTCAACAACCTCCTGCGGCT...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTGGCAGCCGCAGGAGGTaGTTGAGGTGGTTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCGSRRR*LRWFRV
Trigger: AACCCTGAACCACCTCAACAACCTCCTGCGGCTGCC...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS CCA 90 bp TGGTTGCAGGTGTTGAGGGGAGAGATGAAGTTATGGAAGAGCAGCTaGAAGGATCCTGTGCAGATGGGCTGTTTGTTGACTATGGTTGAG +
Preference number: 5 (lower is better)
Translates to: WLQVLRGEMKLWKSS*KDPVQMGCLLTMVE
Trigger: CTCAACCATAGTCAACAAACAGCCCATCTGCACAGGATCCTTCCAGCTGCTCTTCCATAACTTCATCTCTCCCCTCAACACCTGCAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS-3UTR CAA 90 bp GCACAAAGCCCTTGCATTTCATATTTCACAGGCAAACGTCCAAATGTGCAGCGGAGGCCCGTGGGCACCTaGAGTTTGATTGTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: AQSPCISYFTGKRPNVQRRPVGT*SLIVPL
Trigger: TAAAGGGACAATCAAACTCAAGGTGCCCACGGGCCT...CCGCTGCACATTTGGACGTTTGCCTGTGAAATATGAAATGCAAGGGCTTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CAA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGCTTTGGCCGTGATGTaGTTGAGTCCCAGGTCGCTG +
Preference number: 5 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWALAVM*LSPRSL
Trigger: CAGCGACCTGGGACTCAACAACATCACGGCCAAAGC...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp TTAGAAAAAGATGCACAGTGTCTTGCTCAGATGTTGGTATCAGGCCTGCCCATCTGTCTTGCTCAGATGTaGGTATCAGGCCTGCCCATC +
Preference number: 5 (lower is better)
Translates to: LEKDAQCLAQMLVSGLPICLAQM*VSGLPI
Trigger: GATGGGCAGGCCTGATACCAACATCTGAGCAAGACA...GATGGGCAGGCCTGATACCAACATCTGAGCAAGACACTGTGCATCTTTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CAA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGCAGAACCTTCTGGTaGGTCCTGTGCAGCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVCRTFW*VLCSSK
Trigger: CTTCGAGCTGCACAGGACCAACCAGAAGGTTCTGCA...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS TCA 90 bp CAGCTGGAAGGATCCTGTGCAGATGGGCTGTTTGTTGACTATGGTTaGGATTACACAAATCTGCCCATGAGGAAACCGCACACTGTTAAC +
Preference number: 5 (lower is better)
Translates to: QLEGSCADGLFVDYG*DYTNLPMRKPHTVN
Trigger: GTTAACAGTGTGCGGTTTCCTCATGGGCAGATTTGTGTAATCTCAACCATAGTCAACAAACAGCCCATCTGCACAGGATCCTTCCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS TCA 90 bp TATGGAAGAGCAGCTGGAAGGATCCTGTGCAGATGGGCTGTTTGTTaGCTATGGTTGAGATTACACAAATCTGCCCATGAGGAAACCGCA +
Preference number: 5 (lower is better)
Translates to: YGRAAGRILCRWAVC*LWLRLHKSAHEETA
Trigger: TGCGGTTTCCTCATGGGCAGATTTGTGTAATCTCAACCATAGTCAACAAACAGCCCATCTGCACAGGATCCTTCCAGCTGCTCTTCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS-3UTR CAA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGAGGCCCGTGGGCACCTaGAGTTTGATTGTCCCTTTA +
Preference number: 5 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVRPVGT*SLIVPL
Trigger: TAAAGGGACAATCAAACTCAAGGTGCCCACGGGCCT...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAACGGGCTCTCCCATCTaGCTGGTGGAGATCCATGAC +
Preference number: 5 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTTGSPI*LVEIHD
Trigger: GTCATGGATCTCCACCAGCAAGATGGGAGAGCCCGT...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTACAGCAGCCGTCCCCCTaGGCACTCACAAACAGCCCC +
Preference number: 5 (lower is better)
Translates to: VFLSISWSDHLPEFSEMLQQPSP*ALTNSP
Trigger: GGGGCTGTTTGTGAGTGCCAAGGGGGACGGCTGCTG...TAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATATTGACAAGAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGCGGGAGCCGAGGATCTaGGTTGTTCTGAGGACAGGG +
Preference number: 5 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQREPRI*VVLRTG
Trigger: CCCTGTCCTCAGAACAACCAAGATCCTCGGCTCCCG...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACACATCCCGGCAGCAATTaGTGTCTCCGTAAGCAAGGG +
Preference number: 5 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTHPGSN*CLRKQG
Trigger: CCCTTGCTTACGGAGACACAAATTGCTGCCGGGATG...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGTGTTACTGGAACTCATACTaGTTGGGGGTGGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: DHLPEFSEMLTTGTSWVCYWNSY*LGVEMW
Trigger: CCACATCTCCACCCCCAACAAGTATGAGTTCCAGTA...ACACACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp AGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGGTGACAATGACAGACTCATaGGATGGCTCTGGACCATGG +
Preference number: 5 (lower is better)
Translates to: SDHLPEFSEMLTTGTSWVTMTDS*DGSGPW
Trigger: CCATGGTCCAGAGCCATCCAATGAGTCTGTCATTGT...CACCCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp TGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAAGCTGGCTCAAGAATGTGCCCTaGTCCACGTCCCAGGAATTT +
Preference number: 5 (lower is better)
Translates to: WSDHLPEFSEMLTTGTSWLKNVP*STSQEF
Trigger: AAATTCCTGGGACGTGGACAAGGGCACATTCTTGAG...CCAGCTTGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp TTAGAAAAAGATGCACAGTGTCTTGCTCAGATGTTGGTATCAGGCCTGCCCATCAAGATGCACAGTGTCTaGCTCAGATGTTGGTATCAG +
Preference number: 5 (lower is better)
Translates to: LEKDAQCLAQMLVSGLPIKMHSV*LRCWYQ
Trigger: CTGATACCAACATCTGAGCAAGACACTGTGCATCTT...GATGGGCAGGCCTGATACCAACATCTGAGCAAGACACTGTGCATCTTTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CAA 90 bp CGGGACTCAAGGCTGGCTTCATGGCTTGAAGTTTTGTGTGTTAGAAAAAGATGCAGAGGCACAAAGCCCTaGCATTTCATATTTCACAGG +
Preference number: 5 (lower is better)
Translates to: RDSRLASWLEVLCVRKRCRGTKP*HFIFHR
Trigger: CCTGTGAAATATGAAATGCAAGGGCTTTGTGCCTCT...GCATCTTTTTCTAACACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CAA 90 bp ATATCCTGGAGTGATCATTTACCAGAGTTTTCTGAGATGTTAACCACAGGCACAACAAACTGGATGCCCTaGGGAACCGAGAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: ISWSDHLPEFSEMLTTGTTNWMP*GTESFM
Trigger: CATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGT...TGTGCCTGTGGTTAACATCTCAGAAAACTCTGGTAAATGATCACTCCAGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS TCA 90 bp ATGGGCTGTTTGTTGACTATGGTTGAGATTACACAAATCTGCCCATaGGGAAACCGCACACTGTTAACTACAGGCAAAACTTCCCTAGTC +
Preference number: 5 (lower is better)
Translates to: MGCLLTMVEITQICP*GNRTLLTTGKTSLV
Trigger: GACTAGGGAAGTTTTGCCTGTAGTTAACAGTGTGCGGTTTCCTCATGGGCAGATTTGTGTAATCTCAACCATAGTCAACAAACAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS-3UTR CAA 90 bp CCAAATGTGCAGCGGGACTCAAGGCTGGCTTCATGGCTTGAAGTTTTGTGTGTTTTAATGTACCTGATGTaGAGACAATGCCAAATCCAT +
Preference number: 5 (lower is better)
Translates to: PNVQRDSRLASWLEVLCVLMYLM*RQCQIH
Trigger: ATGGATTTGGCATTGTCTCAACATCAGGTACATTAA...AACACACAAAACTTCAAGCCATGAAGCCAGCCTTGAGTCCCGCTGCACATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CAA 90 bp GAGGGAGTTATAAGAGGCACAAAGCCCTTGCATTTCATATTTCACAGGCAAACGGGCTGGCTTCATGGCTaGAAGTTTTGTGTGTTAGAA +
Preference number: 5 (lower is better)
Translates to: EGVIRGTKPLHFIFHRQTGWLHG*KFCVLE
Trigger: TTCTAACACACAAAACTTCAAGCCATGAAGCCAGCC...CGTTTGCCTGTGAAATATGAAATGCAAGGGCTTTGTGCCTCTTATAACTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291440.4
CDS-3UTR CAA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGTCCAGGACAGCCATATaGGAAGACCCTGCATGCAGC +
Preference number: 5 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQSRTAI*EDPACS
Trigger: GCTGCATGCAGGGTCTTCCAATATGGCTGTCCTGGA...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGTTCATCCCCATGTGCTaGTCAAGGAGCAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQFIPMC*SRSSCS
Trigger: GGAGCAGCTGCTCCTTGACAAGCACATGGGGATGAA...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGTTGGTCACATGGCGTTaGCCAGGATGCCCAACAAAC +
Preference number: 5 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQLVTWR*PGCPTN
Trigger: GTTTGTTGGGCATCCTGGCAAACGCCATGTGACCAA...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp AGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACCAGGCCACACACATCTTCTaGGTCACATGGCGTTTGCCA +
Preference number: 5 (lower is better)
Translates to: SKISNVYSCQYPGVIIYQATHIF*VTWRLP
Trigger: TGGCAAACGCCATGTGACCAAGAAGATGTGTGTGGC...CTGGTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACTGGAACTCATACTTGTaGGGGGTGGAGATGTGGACT +
Preference number: 5 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYWNSYL*GVEMWT
Trigger: AGTCCACATCTCCACCCCCAACAAGTATGAGTTCCA...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACTCAAGGTGCAGGTGTTaGACATCCATAAACCCTCCT +
Preference number: 5 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYSRCRC*TSINPP
Trigger: AGGAGGGTTTATGGATGTCAAACACCTGCACCTTGA...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS TCA 90 bp ACACAGGTGAATGCAAGGGAATCATGCTCCAAAGATTATCCGCTCTaGTTCCATTTACCTGGCATTCTCAAAATAACAAAATTACAGACG +
Preference number: 5 (lower is better)
Translates to: TQVNARESCSKDYPL*FHLPGILKITKLQT
Trigger: CGTCTGTAATTTTGTTATTTTGAGAATGCCAGGTAAATGGAATCAGAGCGGATAATCTTTGGAGCATGATTCCCTTGCATTCACCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS-3UTR CAA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACGATGGGTCACTGATGTaGAGACAATGCCAAATCCAT +
Preference number: 5 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYDGSLM*RQCQIH
Trigger: ATGGATTTGGCATTGTCTCAACATCAGTGACCCATC...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS-3UTR CAA 90 bp GTGAGTAAGATCAGTAACGTGTATTCTTGTCAATATCCTGGAGTGATCATTTACTTCAAGACAAAGACGTaGGGTGCAAAGTGGATCATG +
Preference number: 5 (lower is better)
Translates to: VSKISNVYSCQYPGVIIYFKTKT*GAKWIM
Trigger: CATGATCCACTTTGCACCCAACGTCTTTGTCTTGAA...GTAAATGATCACTCCAGGATATTGACAAGAATACACGTTACTGATCTTACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443236.7
CDS CCA 72 bp GAACCGCACGCACGTCAGGCACCGGCTGGGGATCTGTaGGGCAGCGGCGGGCGCAGGCTCGACCCGGGCCAG +
Preference number: 6 (lower is better)
Translates to: EPHARQAPAGDL*GSGGRRLDPGQ
Trigger: CTGGCCCGGGTCGAGCCTGCGCCCGCCGCTGCCCCACAGATCCCCAGCCGGTGCCTGACGTGCGTGCGGTTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597709.1
CDS GCA 72 bp TCGAAGGCTACGGGACGAGGGTGGCGGGTGACCAAGTaGAGGCGCGACGGGTCAGGGACCGGGCCGGGCCGG +
Preference number: 6 (lower is better)
Translates to: SKATGRGWRVTK*RRDGSGTGPGR
Trigger: CCGGCCCGGCCCGGTCCCTGACCCGTCGCGCCTGCACTTGGTCACCCGCCACCCTCGTCCCGTAGCCTTCGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601782.5
CDS TCA 72 bp GAGTGGCCTCGAAGGCTACGGGACGAGGGTGGCGGGTaGCCAAGTGCAGGCGCGACGGGTCAGGGACCGGGC +
Preference number: 6 (lower is better)
Translates to: EWPRRLRDEGGG*PSAGATGQGPG
Trigger: GCCCGGTCCCTGACCCGTCGCGCCTGCACTTGGTCACCCGCCACCCTCGTCCCGTAGCCTTCGAGGCCACTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601782.5
CDS CCA 72 bp CCTGAACCTTGCCCGCGCCCCCACAGAACCTGGGGGTaGGGAAGATGTCCCTGGGTCCCGGGCCCACTACCC +
Preference number: 6 (lower is better)
Translates to: PEPCPRPHRTWG*GRCPWVPGPLP
Trigger: GGGTAGTGGGCCCGGGACCCAGGGACATCTTCCCCACCCCCAGGTTCTGTGGGGGCGCGGGCAAGGTTCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000593739.1
ENST00000596224.5
CDS TCA 72 bp GCGCAGGCTCGACCCGGGCCAGGAGGCCCGGGGCGCTaGGCTCAGGCCCAGAACTGGCTGATTTCAGGGATA +
Preference number: 6 (lower is better)
Translates to: AQARPGPGGPGR*AQAQNWLISGI
Trigger: TATCCCTGAAATCAGCCAGTTCTGGGCCTGAGCTCAGCGCCCCGGGCCTCCTGGCCCGGGTCGAGCCTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597709.1
CDS GCA 72 bp AGAGAAAGGAGACAGGGCGTCCTGTCTGGGCCGCCCTaGAACAACAGCCCCGTCCCCTGCCGCGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: RERRQGVLSGPP*NNSPVPCRASS
Trigger: GGAGGAGGCGCGGCAGGGGACGGGGCTGTTGTTGCAGGGCGGCCCAGACAGGACGCCCTGTCTCCTTTCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000594249.6
ENST00000597335.5
ENST00000600235.5
CDS TCA 72 bp CGGCGCACAGTTCCCGGGCGAGTGGGCTGTGGGTGCTaGCGTTGTAGAAGCGAGTGGCCTCGAAGGCTACGG +
Preference number: 6 (lower is better)
Translates to: RRTVPGRVGCGC*RCRSEWPRRLR
Trigger: CCGTAGCCTTCGAGGCCACTCGCTTCTACAACGTCAGCACCCACAGCCCACTCGCCCGGGAACTGTGCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601782.5
CDS GCA 72 bp CACGCACACACACACACACACACACACACGCGCGCGTaGGCCCGCGCACAGCTGTTCGCTGGTGGGTGTTGC +
Preference number: 6 (lower is better)
Translates to: HAHTHTHTHTRA*ARAQLFAGGCC
Trigger: GCAACACCCACCAGCGAACAGCTGTGCGCGGGCGCACGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS TCA 72 bp GTGGCCTCAGGAGCCCTGACACCGGTGCAAGGTGTCTaGGGACCACAGCACCTGGCCACCACCGAGGTTGAC +
Preference number: 6 (lower is better)
Translates to: VASGALTPVQGV*GPQHLATTEVD
Trigger: GTCAACCTCGGTGGTGGCCAGGTGCTGTGGTCCTCAGACACCTTGCACCGGTGTCAGGGCTCCTGAGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601637.1
CDS TCA 72 bp GAGGCCCGGGGCGCTGAGCTCAGGCCCAGAACTGGCTaGTTTCAGGGATACCCAGGACGCGTGAAACACAGA +
Preference number: 6 (lower is better)
Translates to: EARGAELRPRTG*FQGYPGRVKHR
Trigger: TCTGTGTTTCACGCGTCCTGGGTATCCCTGAAATCAGCCAGTTCTGGGCCTGAGCTCAGCGCCCCGGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597709.1
CDS CCA 72 bp AGCAGGGCAGCCGTTAGGAAGAGAAGCCGCTCTGACTaGCCAGGAGAGGAGAAAGATTCCTATGGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: SRAAVRKRSRSD*PGEEKDSYGAA
Trigger: GGCGGCCCCATAGGAATCTTTCTCCTCTCCTGGCCAGTCAGAGCGGCTTCTCTTCCTAACGGCTGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS CCA 72 bp CCACCTCCTCATTTAGATGGCAGAACCCCAACTGGATaGGGGACACATGGCCCAGGCCTGGCACTGTACAAC +
Preference number: 6 (lower is better)
Translates to: PPPHLDGRTPTG*GTHGPGLALYN
Trigger: GTTGTACAGTGCCAGGCCTGGGCCATGTGTCCCCCATCCAGTTGGGGTTCTGCCATCTAAATGAGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS CCA 72 bp TTTAGATGGCAGAACCCCAACTGGATGGGGGACACATaGCCCAGGCCTGGCACTGTACAACTCTGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: FRWQNPNWMGDT*PRPGTVQLCLL
Trigger: AAGGAGGCAGAGTTGTACAGTGCCAGGCCTGGGCCATGTGTCCCCCATCCAGTTGGGGTTCTGCCATCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS TCA 72 bp CCGAGGTTGACACTGTACCCATCCACACCACTCTGCTaGGCAGCCCTGGGGATTTTGTGGGCTGCATCTATT +
Preference number: 6 (lower is better)
Translates to: PRLTLYPSTPLC*AALGILWAASI
Trigger: AATAGATGCAGCCCACAAAATCCCCAGGGCTGCTCAGCAGAGTGGTGTGGATGGGTACAGTGTCAACCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601637.1
CDS CCA 72 bp GGCGTTTGCCAGGATGCCCAACAAACTGGATGCCCTTaGGAACCGAGAGCTTCATGTACACCTGATGTTGAG +
Preference number: 6 (lower is better)
Translates to: GVCQDAQQTGCP*EPRASCTPDVE
Trigger: CTCAACATCAGGTGTACATGAAGCTCTCGGTTCCCAAGGGCATCCAGTTTGTTGGGCATCCTGGCAAACGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593420.5
CDS CCA 72 bp CTTGGGGCGCGACAGTTAATGGGAGGTCCTGAGCCCTaGCCTTATGGAATTTCACGCAGGTATTTGCCTAAT +
Preference number: 6 (lower is better)
Translates to: LGARQLMGGPEP*PYGISRRYLPN
Trigger: ATTAGGCAAATACCTGCGTGAAATTCCATAAGGCCAGGGCTCAGGACCTCCCATTAACTGTCGCGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000593739.1
ENST00000596224.5
CDS TCA 72 bp GCAGCTGGAAGGATCCTGTGCAGATGGGCTGTTTGTTaGCTATGGTTGAGATTACACAAATCTGCCCATGAG +
Preference number: 6 (lower is better)
Translates to: AAGRILCRWAVC*LWLRLHKSAHE
Trigger: CTCATGGGCAGATTTGTGTAATCTCAACCATAGTCAACAAACAGCCCATCTGCACAGGATCCTTCCAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS CAA 72 bp AAGAGCAGCTGGAAGGATCCTGTGCAGATGGGCTGTTaGTTGACTATGGTTGAGATTACACAAATCTGCCCA +
Preference number: 6 (lower is better)
Translates to: KSSWKDPVQMGC*LTMVEITQICP
Trigger: TGGGCAGATTTGTGTAATCTCAACCATAGTCAACAAACAGCCCATCTGCACAGGATCCTTCCAGCTGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS GCA 72 bp AACCGAGAGCTTCATGTACACCTGATGTTGAGACAATaGCAAATCCATGTTTCGGGGAAGAAAGTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: NRELHVHLMLRQ*QIHVSGKKVLF
Trigger: AAAAAGGACTTTCTTCCCCGAAACATGGATTTGGCATTGTCTCAACATCAGGTGTACATGAAGCTCTCGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593420.5
CDS TCA 72 bp TTGTTGACTATGGTTGAGATTACACAAATCTGCCCATaGGGAAACCGCACACTGTTAACTACAGGCAAAACT +
Preference number: 6 (lower is better)
Translates to: LLTMVEITQICP*GNRTLLTTGKT
Trigger: AGTTTTGCCTGTAGTTAACAGTGTGCGGTTTCCTCATGGGCAGATTTGTGTAATCTCAACCATAGTCAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS CAA 72 bp ATCCTAAATCTGAAATGTTCCAAAATCCAAGTCTTTTaGAGCAGCGACTTGACGTGCTCAAAGGCAATGCTC +
Preference number: 6 (lower is better)
Translates to: ILNLKCSKIQVF*SSDLTCSKAML
Trigger: GAGCATTGCCTTTGAGCACGTCAAGTCGCTGCTCAAAAAGACTTGGATTTTGGAACATTTCAGATTTAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS TCA 72 bp AAAAGAATAAACTATGGATACACGAAACAACACAGGTaGATGCAAGGGAATCATGCTCCAAAGATTATCCGC +
Preference number: 6 (lower is better)
Translates to: KRINYGYTKQHR*MQGNHAPKIIR
Trigger: GCGGATAATCTTTGGAGCATGATTCCCTTGCATTCACCTGTGTTGTTTCGTGTATCCATAGTTTATTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600235.5
CDS TCA 72 bp AATGCAAGGGAATCATGCTCCAAAGATTATCCGCTCTaGTTCCATTTACCTGGCATTCTCAAAATAACAAAA +
Preference number: 6 (lower is better)
Translates to: NARESCSKDYPL*FHLPGILKITK
Trigger: TTTTGTTATTTTGAGAATGCCAGGTAAATGGAATCAGAGCGGATAATCTTTGGAGCATGATTCCCTTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600235.5