RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CPA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000128510

Ensembl transcript IDs: ENST00000222482.10, ENST00000445470.6, ENST00000470542.5, ENST00000473956.5, ENST00000474254.5, ENST00000486598.1, ENST00000488025.1, ENST00000490117.5, ENST00000492072.5, ENST00000493259.5, ENST00000497388.5

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTaGAGGGACACTGCCAGGACACACGACTCCAGGGAGCTGGCTGGA +
Preference number: 1 (lower is better)
Translates to: KNSRTKIEQAGRTSS*RDTARTHDSRELAG
Trigger: TCCAGCCAGCTCCCTGGAGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR TCA 90 bp TTAGATGGTCACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTaGCACAGATCCCCTCCCGCCATCCTGGTCACACTGAATAACAAA +
Preference number: 1 (lower is better)
Translates to: LDGHFTQPSWAQYLQ*HRSPPAILVTLNNK
Trigger: TTTGTTATTCAGTGTGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTGACCATCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR TCA 90 bp TTCCAGGAAGACTGCGAGAAATTAAAGGAAATTCTACATCATCTTTaGGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAG +
Preference number: 1 (lower is better)
Translates to: FQEDCEKLKEILHHL*DPPKDKWCLPQCHQ
Trigger: CTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGATGATGTAGAATTTCCTTTAATTTCTCGCAGTCTTCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR TCA 90 bp AACAAAACAACAACAAAAGGACAGATGGTACGTGCTGAGGTGAAATaGAACAAGAGGCAGCTGGTTGATGAATTCTTGCTCTACTTAGGA +
Preference number: 1 (lower is better)
Translates to: NKTTTKGQMVRAEVK*NKRQLVDEFLLYLG
Trigger: TCCTAAGTAGAGCAAGAATTCATCAACCAGCTGCCTCTTGTTTCATTTCACCTCAGCACGTACCATCTGTCCTTTTGTTGTTGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR TCA 90 bp GCCTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTAGGCAGAGGTTGTGGTaGGCCAAGATCGAGCCATCA +
Preference number: 2 (lower is better)
Translates to: AFLGTVPTVTQIPSRHPGRQRLW*AKIEPS
Trigger: TGATGGCTCGATCTTGGCTCACCACAACCTCTGCCT...ACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR GCA 90 bp GCCTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTTGGTGTCTCCCACAGTaGCACCAGAGCAAGGTCACT +
Preference number: 2 (lower is better)
Translates to: AFLGTVPTVTQIPSRHPGWCLPQ*HQSKVT
Trigger: AGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA...ACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR TCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCACAGCAGGACCAAAATTaGGCAGGCTGGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSQQDQN*AGWQNQ
Trigger: CTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTG...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR GCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGATTCTTGCAGGGACACTaGCAGGACACACGACTCCAG +
Preference number: 2 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGFLQGH*QDTRLQ
Trigger: CTGGAGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAA...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR-3UTR TCA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTCAGCAGGACCAAAATTaGGCAGGCTGGCAGAACCAG +
Preference number: 2 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIQQDQN*AGWQNQ
Trigger: CTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTG...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR GCA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTTTCTTGCAGGGACACTaGCAGGACACACGACTCCAG +
Preference number: 2 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIFLQGH*QDTRLQ
Trigger: CTGGAGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAA...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR TCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAAACCCAGAGGGCTCTaGCTCACACAGGTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCKPRGL*LTQVGK
Trigger: CTTTCCTACCTGTGTGAGTCAGAGCCCTCTGGGTTT...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR-3UTR TCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGCACAGTACCTACAGTaGCACAGATCCCCTCCCGCC +
Preference number: 2 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDAQYLQ*HRSPPA
Trigger: GGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGC...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR TCA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTTCCAGGCCAGATGAGTaGTTTAGGACCTGTAAGATG +
Preference number: 2 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEISRPDE*FRTCKM
Trigger: CATCTTACAGGTCCTAAATCACTCATCTGGCCTGGA...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR CCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCACAGTGCGTGCACGTGTaGGTACAAATAAATGTAGAC +
Preference number: 2 (lower is better)
Translates to: IFETHLKTSGVSHSATRAQCVHV*VQINVD
Trigger: GTCTACATTTATTTGTACCCACACGTGCACGCACTG...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR-3UTR TCA 90 bp AGATGGTCACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTGACACAGATCCACAGTGAAGGAAAGTaGTCTTCTACTTTGTATTCA +
Preference number: 2 (lower is better)
Translates to: RWSLHPAFLGTVPTVTQIHSEGK*SSTLYS
Trigger: TGAATACAAAGTAGAAGATCACTTTCCTTCACTGTG...GATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTGACCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR GCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACAGGCAGAACCAGTTCTTaGAGGGACACTGCCAGGACA +
Preference number: 2 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTGRTSS*RDTART
Trigger: TGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCC...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR CCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACAACACCACAGCACAAATaGGAATGTGCCAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTTPQHK*ECARAV
Trigger: CACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGT...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR TCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCAAAACCCAGAGGGCTCTaGCTCACACAGGTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPKPRGL*LTQVGK
Trigger: CTTTCCTACCTGTGTGAGTCAGAGCCCTCTGGGTTT...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR-3UTR TCA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCGGGAGAGACCTTCACTaGTATCCCTACAAGATTTGC +
Preference number: 2 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFGRDLH*YPYKIC
Trigger: GCAAATCTTGTAGGGATATCAGTGAAGGTCTCTCCC...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR TCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGTGGTACGTGCTGAGGTaGAATGAAACAAGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRWYVLR*NETRGS
Trigger: GCTGCCTCTTGTTTCATTTCACCTCAGCACGTACCA...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR GCA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCATTCTTGCAGGGACACTaGCAGGACACACGACTCCAG +
Preference number: 2 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPFLQGH*QDTRLQ
Trigger: CTGGAGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAA...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR GCA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCAGGCAGAACCAGTTCTTaGAGGGACACTGCCAGGACA +
Preference number: 2 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPGRTSS*RDTART
Trigger: TGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCC...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR TCA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCAAAACCCAGAGGGCTCTaGCTCACACAGGTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPKPRGL*LTQVGK
Trigger: CTTTCCTACCTGTGTGAGTCAGAGCCCTCTGGGTTT...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR CCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGAAAATTAGCCAGGCATaGTGGCATGCGCCTATAAAC +
Preference number: 2 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRKISQA*WHAPIN
Trigger: GTTTATAGGCGCATGCCACCATGCCTGGCTAATTTT...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR TCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCCACAGTGAAGGAAAGTaGTCTTCTACTTTGTATTCA +
Preference number: 2 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFHSEGK*SSTLYS
Trigger: TGAATACAAAGTAGAAGATCACTTTCCTTCACTGTG...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR CCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCACAGTGCGTGCACGTGTaGGTACAAATAAATGTAGAC +
Preference number: 2 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPQCVHV*VQINVD
Trigger: GTCTACATTTATTTGTACCCACACGTGCACGCACTG...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR-3UTR TCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACAATTCTACATCATCTTTaGGACCCACCTAAAGACAAG +
Preference number: 2 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTILHHL*DPPKDK
Trigger: CTTGTCTTTAGGTGGGTCTCAAAGATGATGTAGAAT...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR GCA 72 bp AGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTaGAGCCGCCCAGCCAGCAGGGTGGAAGGAGAAACA +
Preference number: 3 (lower is better)
Translates to: RETCHPGRGDAE*SRPASRVEGET
Trigger: TGTTTCTCCTTCCACCCTGCTGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR TCA 72 bp CACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTaGCACAGATCCCCTCCCGCCATCCTGGTCACACTG +
Preference number: 3 (lower is better)
Translates to: HFTQPSWAQYLQ*HRSPPAILVTL
Trigger: CAGTGTGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR CAA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCAACAGCAGGACCAAAATaGAGCAGGCTGGCAGAACCA +
Preference number: 3 (lower is better)
Translates to: RERHATQEGVMLSAAAQPTAGPK*SRLAEP
Trigger: TGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGT...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR GCA 72 bp AGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTaGAGGGACACTGCCAGGACACACGACTCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: RTKIEQAGRTSS*RDTARTHDSRE
Trigger: CTCCCTGGAGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR-3UTR CAA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAACAGCAGGACCAAAATaGAGCAGGCTGGCAGAACCA +
Preference number: 3 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGTAGPK*SRLAEP
Trigger: TGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGT...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR-3UTR CAA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCATGGCAGAACCAGTTCTaGCAGGGACACTGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: IFETHLKTSGVSHSATRAWQNQF*QGHCQD
Trigger: GTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCA...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR TCA 72 bp TGTGCCAGGGCAGTGAGATTATCCAGGCCAGATGAGTaGTTTAGGACCTGTAAGATGAGGCCTAGATCTTTG +
Preference number: 3 (lower is better)
Translates to: CARAVRLSRPDE*FRTCKMRPRSL
Trigger: CAAAGATCTAGGCCTCATCTTACAGGTCCTAAATCACTCATCTGGCCTGGATAATCTCACTGCCCTGGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
3UTR-3UTR CAA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGTGGCAGAACCAGTTCTaGCAGGGACACTGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEWQNQF*QGHCQD
Trigger: GTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCA...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
3UTR TCA 72 bp GACTGCGAGAAATTAAAGGAAATTCTACATCATCTTTaGGACCCACCTAAAGACAAGTGGTGTCTCCCACAG +
Preference number: 3 (lower is better)
Translates to: DCEKLKEILHHL*DPPKDKWCLPQ
Trigger: CTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGATGATGTAGAATTTCCTTTAATTTCTCGCAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCACCCGCACATGCTCCATaGTGGTCTTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPPAHAP*WSSAPA
Trigger: GGCTGGGGCTGAAGACCATCATGGAGCATGTGCGGG...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCACAGCAGGACCAAAATTaGGCAGGCTGGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPQQDQN*AGWQNQ
Trigger: CTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTG...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCATGGTGTCTCCCACAGTaGCACCAGAGCAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPWCLPQ*HQSKVT
Trigger: AGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCACAGATTGCAGTGGCCTaGGAGATCCACTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPQIAVA*EIHSRE
Trigger: TTCCCGAGAGTGGATCTCCCAGGCCACTGCAATCTG...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCACAGAAGCCAGAGCTTTaGCCGCAAGCCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSQKPEL*PQASPP
Trigger: AGGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTG...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTCAGAAGCCAGAGCTTTaGCCGCAAGCCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTQKPEL*PQASPP
Trigger: AGGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTG...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCACAGGTCAGGAAAGTCTaGGGCAATGTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPQVRKV*GNVVHL
Trigger: GAGATGGACAACATTGCCGCAGACTTTCCTGACCTG...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGATCGGGAATGGATGCCTaGATTCAGCCAAACGGCCGG +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGSGMDA*IQPNGR
Trigger: CCGGCCGTTTGGCTGAATGCAGGCATCCATTCCCGA...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCAGCTGGCTCCCTTTCCTaGAAAACTAGCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPAGSLS*KTSVPV
Trigger: AACTGGAACGCTAGTTTTGCAGGAAAGGGAGCCAGC...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCATTCTTGCAGGGACACTaGCAGGACACACGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSFLQGH*QDTRLQ
Trigger: CTGGAGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAA...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCAGGCAGAACCAGTTCTTaGAGGGACACTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSGRTSS*RDTART
Trigger: TGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCC...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTTTGGCGTGGGGTCCATaGTACACTTCGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTLAWGP*YTSEQG
Trigger: CCCTTGCTCCGAAGTGTACCATGGACCCCACGCCAA...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGACATCCACAGGCCGATTaGAGGAGGAGGGAGATTTCC +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGHPQAD*RRREIS
Trigger: GGAAATCTCCCTCCTCCTTCAATCGGCCTGTGGATG...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCATCCAGGCCAGATGAGTaGTTTAGGACCTGTAAGATG +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPSRPDE*FRTCKM
Trigger: CATCTTACAGGTCCTAAATCACTCATCTGGCCTGGA...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCACCTTGCCGTCCAGATTaGAGTGGCCTGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPPCRPD*SGLGDP
Trigger: TGGATCTCCCAGGCCACTGCAATCTGGACGGCAAGG...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCAAGGTTGTCCCGCACATaGTCCATGATGGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSRLSRT*SMMVFS
Trigger: GCTGAAGACCATCATGGAGCATGTGCGGGACAACCT...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAGGCAGAACCAGTTCTTaGAGGGACACTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGGRTSS*RDTART
Trigger: TGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCC...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGACAGATTGCAGTGGCCTaGGAGATCCACTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGQIAVA*EIHSRE
Trigger: TTCCCGAGAGTGGATCTCCCAGGCCACTGCAATCTG...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCACAGGTGGGACCCACTTaGTACTCAGTGCCCGACACA +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPQVGPT*YSVPDT
Trigger: TGTGTCGGGCACTGAGTACCAAGTGGGTCCCACCTG...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCAACACCACAGCACAAATaGGAATGTGCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSTPQHK*ECARAV
Trigger: CACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGT...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp GCCTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTGGGAGAGACCTTCACTaGTATCCCTACAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: AFLGTVPTVTQIPSRHPGGRDLH*YPYKIC
Trigger: GCAAATCTTGTAGGGATATCAGTGAAGGTCTCTCCC...ACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCAACAGATGGTACGTGCTaGGGTGAAATGAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPTDGTC*GEMKQE
Trigger: CTCTTGTTTCATTTCACCTCAGCACGTACCATCTGT...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp AGATGGTCACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTGACACAGATCTCGGGAATGGATGCCTaGATTCAGCCAAACGGCCGG +
Preference number: 4 (lower is better)
Translates to: RWSLHPAFLGTVPTVTQISGMDA*IQPNGR
Trigger: CCGGCCGTTTGGCTGAATGCAGGCATCCATTCCCGA...GATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTGACCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp AGATGGTCACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTGACACAGATCCCTTGCCGTCCAGATTaGAGTGGCCTGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: RWSLHPAFLGTVPTVTQIPCRPD*SGLGDP
Trigger: TGGATCTCCCAGGCCACTGCAATCTGGACGGCAAGG...GATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTGACCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCACCACTTGGTACTCAGTaGCCGACACAGAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPPLGTQ*PTQKPE
Trigger: CTCTGGCTTCTGTGTCGGGCACTGAGTACCAAGTGG...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCATTCTTGCAGGGACACTaGCAGGACACACGACTCCAG +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPFLQGH*QDTRLQ
Trigger: CTGGAGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAA...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAAGCAAGGGTTGTCGCTaGCTCCCTTTCCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGSKGCR*LPFLQN
Trigger: GTTTTGCAGGAAAGGGAGCCAGCGACAACCCTTGCT...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTCGCCTTTCCCAGTGCTaGACTTCAGTACATACATCG +
Preference number: 4 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTRLSQC*TSVHTS
Trigger: CGATGTATGTACTGAAGTTCAGCACTGGGAAAGGCG...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCAGGGAGAGACCTTCACTaGTATCCCTACAAGATTTGC +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSGRDLH*YPYKIC
Trigger: GCAAATCTTGTAGGGATATCAGTGAAGGTCTCTCCC...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCACCATCCTGGTCACACTaGATAACAAAGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSPSWSH*ITKGRE
Trigger: CTCTCTTCCCTTTGTTATTCAGTGTGACCAGGATGG...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCACATATCCATCAGGATTaGCCACAGGCAACAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPHIHQD*PQATRK
Trigger: TTTTCTTGTTGCCTGTGGCCAATCCTGATGGATATG...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCAGAAACAAGAGGCAGCTaGTTGATGAATTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RERHATQEGVMLSAAAQPETRGS*LMNSCS
Trigger: AGAGCAAGAATTCATCAACCAGCTGCCTCTTGTTTC...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAGGTAAGCCCCGTAGTTaGAGTTATTACTGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGGKPRS*SYYCSV
Trigger: AACGGAGCAGTAATAACTTCAACTACGGGGCTTACC...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000493259.5
CDS-3UTR TCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCAGATGAAATCTACCACTaGTTTCACCTCCACTTCCGA +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSDEIYH*FHLHFR
Trigger: TCGGAAGTGGAGGTGAAATCAGTGGTAGATTTCATC...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTCATCTGGGGCCTTTTTaGCTGAGTACCCATATGGAT +
Preference number: 4 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTHLGPF*LSTHMD
Trigger: ATCCATATGGGTACTCAGTCAAAAAGGCCCCAGATG...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCAAGGCAGAGGTTGTGGTaGGCCAAGATCGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: IFETHLKTSGVSHSATRARQRLW*AKIEPS
Trigger: TGATGGCTCGATCTTGGCTCACCACAACCTCTGCCT...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCATTGGGTCAGCACCAATaGAGGAGCTTCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPLGQHQ*RSFQDF
Trigger: GAAATCCTGGAAGCTCCTGCATTGGTGCTGACCCAA...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCAGATGCCGTTGTCATATaGCCAGTCGATGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: IFETHLKTSGVSHSATRADAVVI*PVDAAP
Trigger: GGGAGCAGCATCGACTGGGCATATGACAACGGCATC...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAGCACAAATGGGAATGTaGCAGGGCAGTGAGATTATC +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGAQMGM*QGSEII
Trigger: GATAATCTCACTGCCCTGGCACATTCCCATTTGTGC...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCACTGCAGACTGACAGATaGGACCAGGACATCCACAGG +
Preference number: 4 (lower is better)
Translates to: IFETHLKTSGVSHSATRALQTDR*DQDIHR
Trigger: CCTGTGGATGTCCTGGTCCCATCTGTCAGTCTGCAG...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp AGATGGTCACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTGACACAGATCCGCCTTTCCCAGTGCTaGACTTCAGTACATACATCG +
Preference number: 4 (lower is better)
Translates to: RWSLHPAFLGTVPTVTQIRLSQC*TSVHTS
Trigger: CGATGTATGTACTGAAGTTCAGCACTGGGAAAGGCG...GATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTGACCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAGATGAAATCTACCACTaGTTTCACCTCCACTTCCGA +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGDEIYH*FHLHFR
Trigger: TCGGAAGTGGAGGTGAAATCAGTGGTAGATTTCATC...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTGCACAGTACCTACAGTaGCACAGATCCCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: RAPLTMASVRARVGTNKCAQYLQ*HRSPPA
Trigger: GGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGC...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTAAGGATTTAAATGCCTaGAGACTGACAGATGGGACC +
Preference number: 4 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTKDLNA*RLTDGT
Trigger: GGTCCCATCTGTCAGTCTGCAGGCATTTAAATCCTT...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCCCGTCCAGATTGCAGTaGCCTGGGAGATCCACTCTC +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCPSRLQ*PGRSTL
Trigger: GAGAGTGGATCTCCCAGGCCACTGCAATCTGGACGG...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGATGGAGGTGATAGCTaGATCCCTCTGGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPDGGDS*IPLVIR
Trigger: TCTGATTACCAGAGGGATCCAGCTATCACCTCCATC...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTGTTCCAGTTTCTATTTaGGTCAGCACCAATGCAGGA +
Preference number: 4 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTVPVSI*VSTNAG
Trigger: TCCTGCATTGGTGCTGACCCAAATAGAAACTGGAAC...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCAAGCAAGGGTTGTCGCTaGCTCCCTTTCCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: IFETHLKTSGVSHSATRASKGCR*LPFLQN
Trigger: GTTTTGCAGGAAAGGGAGCCAGCGACAACCCTTGCT...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCAACTTCCGAATTGGCGTaGGGTCCATGGTACACTTCG +
Preference number: 4 (lower is better)
Translates to: IFETHLKTSGVSHSATRATSELA*GPWYTS
Trigger: CGAAGTGTACCATGGACCCCACGCCAATTCGGAAGT...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTCCTCCACTTCCGAATTaGCGTGGGGTCCATGGTACA +
Preference number: 4 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIPPLPN*RGVHGT
Trigger: TGTACCATGGACCCCACGCCAATTCGGAAGTGGAGG...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCCAGGTGGGACCCACTTaGTACTCAGTGCCCGACACA +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCQVGPT*YSVPDT
Trigger: TGTGTCGGGCACTGAGTACCAAGTGGGTCCCACCTG...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGACAGTGCGTGCACGTGTaGGTACAAATAAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGQCVHV*VQINVD
Trigger: GTCTACATTTATTTGTACCCACACGTGCACGCACTG...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCCCCGCACATGCTCCATaGTGGTCTTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFPAHAP*WSSAPA
Trigger: GGCTGGGGCTGAAGACCATCATGGAGCATGTGCGGG...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp CTTCCTGGGCACAGTACCTACAGTGACACAGATCCCCTCCCGCCATCCTGGTCAAAATTCTCAGCACAGTaGAGGAAAGTGATCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LPGHSTYSDTDPLPPSWSKFSAQ*RKVIFY
Trigger: GTAGAAGATCACTTTCCTTCACTGTGCTGAGAATTT...TGACCAGGATGGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGCCCAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCACAGGAAGGATTTAAATaGCTGCAGACTGACAGATGG +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPQEGFK*LQTDRW
Trigger: CCATCTGTCAGTCTGCAGGCATTTAAATCCTTCCTG...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCTTCTTGCAGGGACACTaGCAGGACACACGACTCCAG +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCFLQGH*QDTRLQ
Trigger: CTGGAGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAA...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAAAAATTAGCCAGGCATaGTGGCATGCGCCTATAAAC +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPKISQA*WHAPIN
Trigger: GTTTATAGGCGCATGCCACCATGCCTGGCTAATTTT...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGCCCGCACATGCTCCATaGTGGTCTTCAGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRPAHAP*WSSAPA
Trigger: GGCTGGGGCTGAAGACCATCATGGAGCATGTGCGGG...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTCAGGTCAGGAAAGTCTaGGGCAATGTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIQVRKV*GNVVHL
Trigger: GAGATGGACAACATTGCCGCAGACTTTCCTGACCTG...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCACTCTCGGGAATGGATaGCTGCATTCAGCCAAACGG +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCTLGNG*LHSAKR
Trigger: CCGTTTGGCTGAATGCAGGCATCCATTCCCGAGAGT...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCCCTTGCCGTCCAGATTaGAGTGGCCTGGGAGATCCA +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFPCRPD*SGLGDP
Trigger: TGGATCTCCCAGGCCACTGCAATCTGGACGGCAAGG...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGTTGTCCCGCACATaGTCCATGATGGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCRLSRT*SMMVFS
Trigger: GCTGAAGACCATCATGGAGCATGTGCGGGACAACCT...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTTGGTGTCTCCCACAGTaGCACCAGAGCAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: RAPLTMASVRARVGTNKCWCLPQ*HQSKVT
Trigger: AGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCCCGTCCAGATTGCAGTaGCCTGGGAGATCCACTCTC +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFPSRLQ*PGRSTL
Trigger: GAGAGTGGATCTCCCAGGCCACTGCAATCTGGACGG...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCTTGGCGTGGGGTCCATaGTACACTTCGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFLAWGP*YTSEQG
Trigger: CCCTTGCTCCGAAGTGTACCATGGACCCCACGCCAA...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCACTTCCGAATTGGCGTaGGGTCCATGGTACACTTCG +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCTSELA*GPWYTS
Trigger: CGAAGTGTACCATGGACCCCACGCCAATTCGGAAGT...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCCCACCTAAAGACAAGTaGTGTCTCCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCPPKDK*CLPQCH
Trigger: GTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGG...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTTCCCATGTTTTTGGATaGAATCTACCACTGATTTCA +
Preference number: 4 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTSHVFG*NLPLIS
Trigger: TGAAATCAGTGGTAGATTTCATCCAAAAACATGGGA...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAATTCTACATCATCTTTaGGACCCACCTAAAGACAAG +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPILHHL*DPPKDK
Trigger: CTTGTCTTTAGGTGGGTCTCAAAGATGATGTAGAAT...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTCACAGTGAAGGAAAGTaGTCTTCTACTTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTHSEGK*SSTLYS
Trigger: TGAATACAAAGTAGAAGATCACTTTCCTTCACTGTG...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACAGCACAGTACCTACAGTaGCACAGATCCCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTAQYLQ*HRSPPA
Trigger: GGCGGGAGGGGATCTGTGTCACTGTAGGTACTGTGC...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCAACAGATGGTACGTGCTaGGGTGAAATGAAACAAGAG +
Preference number: 4 (lower is better)
Translates to: IFETHLKTSGVSHSATRATDGTC*GEMKQE
Trigger: CTCTTGTTTCATTTCACCTCAGCACGTACCATCTGT...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTAGATACAATCTTCCTTaGCGTCCAGATTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIRYNLP*RPDCSG
Trigger: GCCACTGCAATCTGGACGGCAAGGAAGATTGTATCT...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCCTGGATAGACAGTGGTaGAGGTGGGACCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFLDRQW*RWDPLG
Trigger: ACCAAGTGGGTCCCACCTGCACCACTGTCTATCCAG...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTGCGTACTCTAAGCCCTaGGATCTCAGGAAGGATTTA +
Preference number: 4 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIAYSKP*DLRKDL
Trigger: TAAATCCTTCCTGAGATCCCAGGGCTTAGAGTACGC...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCAGTTCCAGTTTCTATTTaGGTCAGCACCAATGCAGGA +
Preference number: 4 (lower is better)
Translates to: IFETHLKTSGVSHSATRAVPVSI*VSTNAG
Trigger: TCCTGCATTGGTGCTGACCCAAATAGAAACTGGAAC...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACACAGAAGCCAGAGCTTTaGCCGCAAGCCTCGCCACCT +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTQKPEL*PQASPP
Trigger: AGGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTG...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATCAGGTGGGACCCACTTaGTACTCAGTGCCCGACACA +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDQVGPT*YSVPDT
Trigger: TGTGTCGGGCACTGAGTACCAAGTGGGTCCCACCTG...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTCCACCTAAAGACAAGTaGTGTCTCCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RAPLTMASVRARVGTNKCPPKDK*CLPQCH
Trigger: GTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGG...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCATTTGAATTCACTAGTTaGCTCAATTTGCTGATCTCG +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPFEFTS*LNLLIS
Trigger: CGAGATCAGCAAATTGAGTCAACTAGTGAATTCAAA...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCCATCTGGGGCCTTTTTaGCTGAGTACCCATATGGAT +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCHLGPF*LSTHMD
Trigger: ATCCATATGGGTACTCAGTCAAAAAGGCCCCAGATG...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCAAACCCAGAGGGCTCTaGCTCACACAGGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFKPRGL*LTQVGK
Trigger: CTTTCCTACCTGTGTGAGTCAGAGCCCTCTGGGTTT...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCCAGCAGGACCAAAATTaGGCAGGCTGGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFQQDQN*AGWQNQ
Trigger: CTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTG...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATAGGCAGAGGTTGTGGTaGGCCAAGATCGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDRQRLW*AKIEPS
Trigger: TGATGGCTCGATCTTGGCTCACCACAACCTCTGCCT...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGATACAATCTTCCTTaGCGTCCAGATTGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCRYNLP*RPDCSG
Trigger: GCCACTGCAATCTGGACGGCAAGGAAGATTGTATCT...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCCCACTTGGTACTCAGTaGCCGACACAGAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFPLGTQ*PTQKPE
Trigger: CTCTGGCTTCTGTGTCGGGCACTGAGTACCAAGTGG...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCACAACTCAAATGTGAATaGAAATTTGATGCCGTTGTC +
Preference number: 4 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPQLKCE*KFDAVV
Trigger: GACAACGGCATCAAATTTGCATTCACATTTGAGTTG...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATCAGATTGCAGTGGCCTaGGAGATCCACTCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDQIAVA*EIHSRE
Trigger: TTCCCGAGAGTGGATCTCCCAGGCCACTGCAATCTG...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACATTGGCGTGGGGTCCATaGTACACTTCGGAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTLAWGP*YTSEQG
Trigger: CCCTTGCTCCGAAGTGTACCATGGACCCCACGCCAA...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTAAAATTAGCCAGGCATaGTGGCATGCGCCTATAAAC +
Preference number: 4 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIKISQA*WHAPIN
Trigger: GTTTATAGGCGCATGCCACCATGCCTGGCTAATTTT...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCTGGGGCCTTTTTGACTaGGTACCCATATGGATACAT +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCWGLFD*VPIWIH
Trigger: ATGTATCCATATGGGTACTCAGTCAAAAAGGCCCCA...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTCATCTGGGGCCTTTTTaGCTGAGTACCCATATGGAT +
Preference number: 4 (lower is better)
Translates to: RAPLTMASVRARVGTNKCHLGPF*LSTHMD
Trigger: ATCCATATGGGTACTCAGTCAAAAAGGCCCCAGATG...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCCAGGTCAGGAAAGTCTaGGGCAATGTTGTCCATCTC +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFQVRKV*GNVVHL
Trigger: GAGATGGACAACATTGCCGCAGACTTTCCTGACCTG...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGTCGGGAATGGATGCCTaGATTCAGCCAAACGGCCGG +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNESGMDA*IQPNGR
Trigger: CCGGCCGTTTGGCTGAATGCAGGCATCCATTCCCGA...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACACCACTTGGTACTCAGTaGCCGACACAGAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTPLGTQ*PTQKPE
Trigger: CTCTGGCTTCTGTGTCGGGCACTGAGTACCAAGTGG...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGCTGCAGACTGACAGATaGGACCAGGACATCCACAGG +
Preference number: 4 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRLQTDR*DQDIHR
Trigger: CCTGTGGATGTCCTGGTCCCATCTGTCAGTCTGCAG...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCACCGTCCAGATTGCAGTaGCCTGGGAGATCCACTCTC +
Preference number: 4 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPPSRLQ*PGRSTL
Trigger: GAGAGTGGATCTCCCAGGCCACTGCAATCTGGACGG...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACACCTCCACTTCCGAATTaGCGTGGGGTCCATGGTACA +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTPPLPN*RGVHGT
Trigger: TGTACCATGGACCCCACGCCAATTCGGAAGTGGAGG...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATACACCACAGCACAAATaGGAATGTGCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDTPQHK*ECARAV
Trigger: CACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGT...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCGGTAAGCCCCGTAGTTaGAGTTATTACTGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFGKPRS*SYYCSV
Trigger: AACGGAGCAGTAATAACTTCAACTACGGGGCTTACC...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000222482.10
CDS-3UTR TCA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCATCCCATGTTTTTGGATaGAATCTACCACTGATTTCA +
Preference number: 4 (lower is better)
Translates to: IFETHLKTSGVSHSATRASHVFG*NLPLIS
Trigger: TGAAATCAGTGGTAGATTTCATCCAAAAACATGGGA...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGAAACCCAGAGGGCTCTaGCTCACACAGGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRKPRGL*LTQVGK
Trigger: CTTTCCTACCTGTGTGAGTCAGAGCCCTCTGGGTTT...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGCAGCAGGACCAAAATTaGGCAGGCTGGCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEQQDQN*AGWQNQ
Trigger: CTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTG...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCCCATCCTGGTCACACTaGATAACAAAGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFPSWSH*ITKGRE
Trigger: CTCTCTTCCCTTTGTTATTCAGTGTGACCAGGATGG...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATTGGTACGTGCTGAGGTaGAATGAAACAAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDWYVLR*NETRGS
Trigger: GCTGCCTCTTGTTTCATTTCACCTCAGCACGTACCA...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCTGGTACGTGCTGAGGTaGAATGAAACAAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFWYVLR*NETRGS
Trigger: GCTGCCTCTTGTTTCATTTCACCTCAGCACGTACCA...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCTTGGGTCAGCACCAATaGAGGAGCTTCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFLGQHQ*RSFQDF
Trigger: GAAATCCTGGAAGCTCCTGCATTGGTGCTGACCCAA...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATTTGGGTCAGCACCAATaGAGGAGCTTCCAGGATTTC +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDLGQHQ*RSFQDF
Trigger: GAAATCCTGGAAGCTCCTGCATTGGTGCTGACCCAA...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCACTGGATAGACAGTGGTaGAGGTGGGACCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPLDRQW*RWDPLG
Trigger: ACCAAGTGGGTCCCACCTGCACCACTGTCTATCCAG...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGATGCCGTTGTCATATaGCCAGTCGATGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEDAVVI*PVDAAP
Trigger: GGGAGCAGCATCGACTGGGCATATGACAACGGCATC...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCAGATGCCGTTGTCATATaGCCAGTCGATGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPDAVVI*PVDAAP
Trigger: GGGAGCAGCATCGACTGGGCATATGACAACGGCATC...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGGCAGAACCAGTTCTTaGAGGGACACTGCCAGGACA +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEGRTSS*RDTART
Trigger: TGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCC...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCATGGTGTCTCCCACAGTaGCACCAGAGCAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPWCLPQ*HQSKVT
Trigger: AGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCGATGGAGGTGATAGCTaGATCCCTCTGGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFDGGDS*IPLVIR
Trigger: TCTGATTACCAGAGGGATCCAGCTATCACCTCCATC...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTGTTCCAGTTTCTATTTaGGTCAGCACCAATGCAGGA +
Preference number: 4 (lower is better)
Translates to: RAPLTMASVRARVGTNKCVPVSI*VSTNAG
Trigger: TCCTGCATTGGTGCTGACCCAAATAGAAACTGGAAC...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGACTTCCGAATTGGCGTaGGGTCCATGGTACACTTCG +
Preference number: 4 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRTSELA*GPWYTS
Trigger: CGAAGTGTACCATGGACCCCACGCCAATTCGGAAGT...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCACCTCCACTTCCGAATTaGCGTGGGGTCCATGGTACA +
Preference number: 4 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPPPLPN*RGVHGT
Trigger: TGTACCATGGACCCCACGCCAATTCGGAAGTGGAGG...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGAAACCCAGAGGGCTCTaGCTCACACAGGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEKPRGL*LTQVGK
Trigger: CTTTCCTACCTGTGTGAGTCAGAGCCCTCTGGGTTT...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTCCTAGATCTTTGAAGTaGGTTCAAAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RAPLTMASVRARVGTNKCPRSLK*VQKAKR
Trigger: CCTCTTTGCCTTTTGAACTCACTTCAAAGATCTAGG...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCCAGGAAGGATTTAAATaGCTGCAGACTGACAGATGG +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFQEGFK*LQTDRW
Trigger: CCATCTGTCAGTCTGCAGGCATTTAAATCCTTCCTG...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCAACTCTCGGGAATGGATaGCTGCATTCAGCCAAACGG +
Preference number: 4 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPTLGNG*LHSAKR
Trigger: CCGTTTGGCTGAATGCAGGCATCCATTCCCGAGAGT...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR GCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACAGCTGGCTCCCTTTCCTaGAAAACTAGCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTAGSLS*KTSVPV
Trigger: AACTGGAACGCTAGTTTTGCAGGAAAGGGAGCCAGC...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCACTGGATAGACAGTGGTaGAGGTGGGACCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPLDRQW*RWDPLG
Trigger: ACCAAGTGGGTCCCACCTGCACCACTGTCTATCCAG...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGAGGTTGTCCCGCACATaGTCCATGATGGTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNERLSRT*SMMVFS
Trigger: GCTGAAGACCATCATGGAGCATGTGCGGGACAACCT...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGATGGAGGTGATAGCTaGATCCCTCTGGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDDGGDS*IPLVIR
Trigger: TCTGATTACCAGAGGGATCCAGCTATCACCTCCATC...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTCATATCCATCAGGATTaGCCACAGGCAACAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RAPLTMASVRARVGTNKCHIHQD*PQATRK
Trigger: TTTTCTTGTTGCCTGTGGCCAATCCTGATGGATATG...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGAGCAAGGGTTGTCGCTaGCTCCCTTTCCTGCAAAAC +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNESKGCR*LPFLQN
Trigger: GTTTTGCAGGAAAGGGAGCCAGCGACAACCCTTGCT...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCACCACCTAAAGACAAGTaGTGTCTCCCACAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPPPKDK*CLPQCH
Trigger: GTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGG...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGATGAAATCTACCACTaGTTTCACCTCCACTTCCGA +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDDEIYH*FHLHFR
Trigger: TCGGAAGTGGAGGTGAAATCAGTGGTAGATTTCATC...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCCACAGTGAAGGAAAGTaGTCTTCTACTTTGTATTCA +
Preference number: 4 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCHSEGK*SSTLYS
Trigger: TGAATACAAAGTAGAAGATCACTTTCCTTCACTGTG...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTAAATTCTCAGCACAGTaGAGGAAAGTGATCTTCTAC +
Preference number: 4 (lower is better)
Translates to: RAPLTMASVRARVGTNKCKFSAQ*RKVIFY
Trigger: GTAGAAGATCACTTTCCTTCACTGTGCTGAGAATTT...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACATCCAGGCCAGATGAGTaGTTTAGGACCTGTAAGATG +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTSRPDE*FRTCKM
Trigger: CATCTTACAGGTCCTAAATCACTCATCTGGCCTGGA...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCAACTCTCGGGAATGGATaGCTGCATTCAGCCAAACGG +
Preference number: 4 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPTLGNG*LHSAKR
Trigger: CCGTTTGGCTGAATGCAGGCATCCATTCCCGAGAGT...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCAGCTGGCTCCCTTTCCTaGAAAACTAGCGTTCCAGTT +
Preference number: 4 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPAGSLS*KTSVPV
Trigger: AACTGGAACGCTAGTTTTGCAGGAAAGGGAGCCAGC...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACAGCGTACTCTAAGCCCTaGGATCTCAGGAAGGATTTA +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTAYSKP*DLRKDL
Trigger: TAAATCCTTCCTGAGATCCCAGGGCTTAGAGTACGC...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCCATATCCATCAGGATTaGCCACAGGCAACAAGAAAA +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFHIHQD*PQATRK
Trigger: TTTTCTTGTTGCCTGTGGCCAATCCTGATGGATATG...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATATCCTGCAATTTAGATaGTCACTTCACCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDILQFR*SLHPAF
Trigger: GAAGGCTGGGTGAAGTGACCATCTAAATTGCAGGAT...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCACGCCTTTCCCAGTGCTaGACTTCAGTACATACATCG +
Preference number: 4 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPRLSQC*TSVHTS
Trigger: CGATGTATGTACTGAAGTTCAGCACTGGGAAAGGCG...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACATGGGGCCTTTTTGACTaGGTACCCATATGGATACAT +
Preference number: 4 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTWGLFD*VPIWIH
Trigger: ATGTATCCATATGGGTACTCAGTCAAAAAGGCCCCA...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCCCTAGATCTTTGAAGTaGGTTCAAAAGGCAAAGAGG +
Preference number: 4 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFPRSLK*VQKAKR
Trigger: CCTCTTTGCCTTTTGAACTCACTTCAAAGATCTAGG...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGAAGGATTTAAATGCCTaGAGACTGACAGATGGGACC +
Preference number: 4 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRKDLNA*RLTDGT
Trigger: GGTCCCATCTGTCAGTCTGCAGGCATTTAAATCCTT...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATTTACTGCTCCGTTCTTaGCCTTCATTGTGTTGCATT +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDLLLRS*PSLCCI
Trigger: AATGCAACACAATGAAGGGCAAGAACGGAGCAGTAA...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000222482.10
CDS-3UTR GCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGCACAAATGGGAATGTaGCAGGGCAGTGAGATTATC +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEAQMGM*QGSEII
Trigger: GATAATCTCACTGCCCTGGCACATTCCCATTTGTGC...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCAATCCACTCTCGGGAATaGATGCCTGCATTCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPIHSRE*MPAFSQ
Trigger: TTGGCTGAATGCAGGCATCCATTCCCGAGAGTGGAT...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCTCCCATGTTTTTGGATaGAATCTACCACTGATTTCA +
Preference number: 4 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFSHVFG*NLPLIS
Trigger: TGAAATCAGTGGTAGATTTCATCCAAAAACATGGGA...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR TCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGTGGGGCCTTTTTGACTaGGTACCCATATGGATACAT +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEWGLFD*VPIWIH
Trigger: ATGTATCCATATGGGTACTCAGTCAAAAAGGCCCCA...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR TCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATATTCTACATCATCTTTaGGACCCACCTAAAGACAAG +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDILHHL*DPPKDK
Trigger: CTTGTCTTTAGGTGGGTCTCAAAGATGATGTAGAAT...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGCAGTGCGTGCACGTGTaGGTACAAATAAATGTAGAC +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEQCVHV*VQINVD
Trigger: GTCTACATTTATTTGTACCCACACGTGCACGCACTG...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CCA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGATCCTGCAATTTAGATaGTCACTTCACCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEILQFR*SLHPAF
Trigger: GAAGGCTGGGTGAAGTGACCATCTAAATTGCAGGAT...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGGAAACAAGAGGCAGCTaGTTGATGAATTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRETRGS*LMNSCS
Trigger: AGAGCAAGAATTCATCAACCAGCTGCCTCTTGTTTC...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGGAGTCAGTCATACAGTaGCTGAGTCAAGCTGTATTT +
Preference number: 4 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRESVIQ*LSQAVF
Trigger: AAATACAGCTTGACTCAGCCACTGTATGACTGACTC...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445470.6
CDS-3UTR TCA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATTTTGAATTCACTAGTTaGCTCAATTTGCTGATCTCG +
Preference number: 4 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDFEFTS*LNLLIS
Trigger: CGAGATCAGCAAATTGAGTCAACTAGTGAATTCAAA...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCCAACTCAAATGTGAATaGAAATTTGATGCCGTTGTC +
Preference number: 4 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFQLKCE*KFDAVV
Trigger: GACAACGGCATCAAATTTGCATTCACATTTGAGTTG...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR GCA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGCAACTCAAATGTGAATaGAAATTTGATGCCGTTGTC +
Preference number: 4 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRQLKCE*KFDAVV
Trigger: GACAACGGCATCAAATTTGCATTCACATTTGAGTTG...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS CCA 90 bp CTTGCCGTCCAGATTGCAGTGGCCTGGGAGATCCACTCTCGGGAATaGATGCCTGCATTCAGCCAAACGGCCGGCCGCCTCACGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LAVQIAVAWEIHSRE*MPAFSQTAGRLTPF
Trigger: GAAAGGCGTGAGGCGGCCGGCCGTTTGGCTGAATGCAGGCATCCATTCCCGAGAGTGGATCTCCCAGGCCACTGCAATCTGGACGGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000473956.5
ENST00000474254.5
ENST00000493259.5
CDS CCA 90 bp TGGGACCCACTTGGTACTCAGTGCCCGACACAGAAGCCAGAGCTTTaGCCGCAAGCCTCGCCACCTTGTCGAGTTCCTCGGCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: WDPLGTQCPTQKPEL*PQASPPCRVPRHLG
Trigger: CCCCAGATGCCGAGGAACTCGACAAGGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTGTGTCGGGCACTGAGTACCAAGTGGGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS CCA 90 bp GCCACATGGCATGCTGCAGGGGCACCCCGGCACCATCAGCATTCCTaGCTAATACCACGCAGCATGACCTTCCTTGCCGTCCAGATTGCA +
Preference number: 5 (lower is better)
Translates to: ATWHAAGAPRHHQHS*LIPRSMTFLAVQIA
Trigger: TGCAATCTGGACGGCAAGGAAGGTCATGCTGCGTGGTATTAGCCAGGAATGCTGATGGTGCCGGGGTGCCCCTGCAGCATGCCATGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CCA 90 bp CTATGGGGCCTTGTCTGGGTGTTGCTCTGCTCCCTTTCTGCGGAGTaGACTGCTCTCAGAGGCTCAGGCCCACCTCTGCTGCATATCAGC +
Preference number: 5 (lower is better)
Translates to: LWGLVWVLLCSLSAE*TALRGSGPPLLHIS
Trigger: GCTGATATGCAGCAGAGGTGGGCCTGAGCCTCTGAGAGCAGTCCACTCCGCAGAAAGGGAGCAGAGCAACACCCAGACAAGGCCCCATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CCA 90 bp AGATGGAGATGGCGTGAGGTCCCCGAGGGTCTATGGGGCCTTGTCTaGGTGTTGCTCTGCTCCCTTTCTGCGGAGTGGACTGCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: RWRWREVPEGLWGLV*VLLCSLSAEWTALR
Trigger: TCTGAGAGCAGTCCACTCCGCAGAAAGGGAGCAGAGCAACACCCAGACAAGGCCCCATAGACCCTCGGGGACCTCACGCCATCTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CCA 90 bp AGCCTTTCTAGGAGATGGAGATGGCGTGAGGTCCCCGAGGGTCTATaGGGCCTTGTCTGGGTGTTGCTCTGCTCCCTTTCTGCGGAGTGG +
Preference number: 5 (lower is better)
Translates to: SLSRRWRWREVPEGL*GLVWVLLCSLSAEW
Trigger: CCACTCCGCAGAAAGGGAGCAGAGCAACACCCAGACAAGGCCCCATAGACCCTCGGGGACCTCACGCCATCTCCATCTCCTAGAAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS-3UTR CAA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAGCAGGTGGGACCCACTaGGTACTCAGTGCCCGACAC +
Preference number: 5 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGAGGTH*VLSARH
Trigger: GTGTCGGGCACTGAGTACCAAGTGGGTCCCACCTGC...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCAACATCCACAGGCCGATaGAAGGAGGAGGGAGATTTC +
Preference number: 5 (lower is better)
Translates to: RERHATQEGVMLSAAAQPTSTGR*KEEGDF
Trigger: GAAATCTCCCTCCTCCTTCAATCGGCCTGTGGATGT...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCACAGATACAATCTTCCTaGCCGTCCAGATTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RERHATQEGVMLSAAAQPQIQSS*PSRLQW
Trigger: CCACTGCAATCTGGACGGCAAGGAAGATTGTATCTG...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCACGTTCCAGTTTCTATTaGGGTCAGCACCAATGCAGG +
Preference number: 5 (lower is better)
Translates to: RERHATQEGVMLSAAAQPRSSFY*GQHQCR
Trigger: CCTGCATTGGTGCTGACCCAAATAGAAACTGGAACG...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTACTTCGGAGCAAGGGTaGTCGCTGGCTCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTTSEQG*SLAPFP
Trigger: AGGAAAGGGAGCCAGCGACAACCCTTGCTCCGAAGT...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAACCTCCACTTCCGAATaGGCGTGGGGTCCATGGTAC +
Preference number: 5 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGTSTSE*AWGPWY
Trigger: GTACCATGGACCCCACGCCAATTCGGAAGTGGAGGT...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS GCA 90 bp GCACCATCAGCATTCCTGGCTAATACCACGCAGCATGACCTTCCTTaGCGTCCAGATTGCAGTGGCCTGGGAGATCCACTCTCGGGAATG +
Preference number: 5 (lower is better)
Translates to: APSAFLANTTQHDLP*RPDCSGLGDPLSGM
Trigger: CATTCCCGAGAGTGGATCTCCCAGGCCACTGCAATCTGGACGGCAAGGAAGGTCATGCTGCGTGGTATTAGCCAGGAATGCTGATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS-3UTR CAA 90 bp AGAGAGAGACATGCCACCCAGGAAGGGGTGATGCTGAGTGCAGCCGCCCAGCCAACATATCCATCAGGATaGGCCACAGGCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: RERHATQEGVMLSAAAQPTYPSG*ATGNKK
Trigger: TTTCTTGTTGCCTGTGGCCAATCCTGATGGATATGT...TGGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTGGCATGTCTCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp AGATGGTCACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTGACACAGATCACTTCGGAGCAAGGGTaGTCGCTGGCTCCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: RWSLHPAFLGTVPTVTQITSEQG*SLAPFP
Trigger: AGGAAAGGGAGCCAGCGACAACCCTTGCTCCGAAGT...GATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTGACCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp AGATGGTCACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTGACACAGATCACCTCCACTTCCGAATaGGCGTGGGGTCCATGGTAC +
Preference number: 5 (lower is better)
Translates to: RWSLHPAFLGTVPTVTQITSTSE*AWGPWY
Trigger: GTACCATGGACCCCACGCCAATTCGGAAGTGGAGGT...GATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTGACCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTGCAGGTGGGACCCACTaGGTACTCAGTGCCCGACAC +
Preference number: 5 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIAGGTH*VLSARH
Trigger: GTGTCGGGCACTGAGTACCAAGTGGGTCCCACCTGC...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS GCA 90 bp TGGTCCTATGCAAGAGCAGGAGGCAGGAGGCATAGTCTACCTACCTaGAGGTCCTCAATTGTCACTGCGTACTCTAAGCCCTGGGATCTC +
Preference number: 5 (lower is better)
Translates to: WSYARAGGRRHSLPT*RSSIVTAYSKPWDL
Trigger: GAGATCCCAGGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGGTAGGTAGACTATGCCTCCTGCCTCCTGCTCTTGCATAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS CCA 90 bp GTCGCTGGCTCCCTTTCCTGCAAAACTAGCGTTCCAGTTTCTATTTaGGTCAGCACCAATGCAGGAGCTTCCAGGATTTCGGGACCGCGT +
Preference number: 5 (lower is better)
Translates to: VAGSLSCKTSVPVSI*VSTNAGASRISGPR
Trigger: ACGCGGTCCCGAAATCCTGGAAGCTCCTGCATTGGTGCTGACCCAAATAGAAACTGGAACGCTAGTTTTGCAGGAAAGGGAGCCAGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS CCA 90 bp AACCAGAACTTGCAAATCACTCCGGTCTACTCTGGACTGGCTGCCTaGTCCTATGCAAGAGCAGGAGGCAGGAGGCATAGTCTACCTACC +
Preference number: 5 (lower is better)
Translates to: NQNLQITPVYSGLAA*SYARAGGRRHSLPT
Trigger: GGTAGGTAGACTATGCCTCCTGCCTCCTGCTCTTGCATAGGACCAGGCAGCCAGTCCAGAGTAGACCGGAGTGATTTGCAAGTTCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS-3UTR CAA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTCAGATACAATCTTCCTaGCCGTCCAGATTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTQIQSS*PSRLQW
Trigger: CCACTGCAATCTGGACGGCAAGGAAGATTGTATCTG...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS TCA 90 bp GAGCTTCCAGGATTTCGGGACCGCGTCTTCCTCCATAATCGGTTCTaGAAAAGCCACCAAGGAGGGGACAAACAACCAGAGGCAGATCAG +
Preference number: 5 (lower is better)
Translates to: ELPGFRDRVFLHNRF*KSHQGGDKQPEADQ
Trigger: CTGATCTGCCTCTGGTTGTTTGTCCCCTCCTTGGTGGCTTTTTCAGAACCGATTATGGAGGAAGACGCGGTCCCGAAATCCTGGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488025.1
CDS-3UTR CAA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAGCAAATTTGATGCCGTaGTCATATGCCCAGTCGATG +
Preference number: 5 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGANLMP*SYAQSM
Trigger: CATCGACTGGGCATATGACAACGGCATCAAATTTGC...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS GCA 90 bp ACTGCGTACTCTAAGCCCTGGGATCTCAGGAAGGATTTAAATGCCTaGAGACTGACAGATGGGACCAGGACATCCACAGGCCGATTGAAG +
Preference number: 5 (lower is better)
Translates to: TAYSKPWDLRKDLNA*RLTDGTRTSTGRLK
Trigger: CTTCAATCGGCCTGTGGATGTCCTGGTCCCATCTGTCAGTCTGCAGGCATTTAAATCCTTCCTGAGATCCCAGGGCTTAGAGTACGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000470542.5
ENST00000473956.5
ENST00000474254.5
ENST00000486598.1
ENST00000490117.5
ENST00000492072.5
ENST00000497388.5
CDS CCA 90 bp AAGGATAAAACCAGAACTTGCAAATCACTCCGGTCTACTCTGGACTaGCTGCCTGGTCCTATGCAAGAGCAGGAGGCAGGAGGCATAGTC +
Preference number: 5 (lower is better)
Translates to: KDKTRTCKSLRSTLD*LPGPMQEQEAGGIV
Trigger: GACTATGCCTCCTGCCTCCTGCTCTTGCATAGGACCAGGCAGCCAGTCCAGAGTAGACCGGAGTGATTTGCAAGTTCTGGTTTTATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS-3UTR CAA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGAATTACTGCTCCGTTCTaGCCCTTCATTGTGTTGCAT +
Preference number: 5 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGITAPF*PFIVLH
Trigger: ATGCAACACAATGAAGGGCAAGAACGGAGCAGTAAT...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000493259.5
CDS-3UTR CAA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTTCCTTGCCGTCCAGATaGCAGTGGCCTGGGAGATCC +
Preference number: 5 (lower is better)
Translates to: RAPLTMASVRARVGTNKCSLPSR*QWPGRS
Trigger: GGATCTCCCAGGCCACTGCAATCTGGACGGCAAGGA...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp TTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCAGGACACACGACTACATATCCATCAGGATaGGCCACAGGCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: LSRLAEPVLAGTLPGHTTTYPSG*ATGNKK
Trigger: TTTCTTGTTGCCTGTGGCCAATCCTGATGGATATGT...AGTCGTGTGTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCACCTCCACTTCCGAATaGGCGTGGGGTCCATGGTAC +
Preference number: 5 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCTSTSE*AWGPWY
Trigger: GTACCATGGACCCCACGCCAATTCGGAAGTGGAGGT...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp AGATGGTCACTTCACCCAGCCTTCCTGGGCACAGTACCTACAGTGACACAGATCGCATCTGGGGCCTTTTaGACTGAGTACCCATATGGA +
Preference number: 5 (lower is better)
Translates to: RWSLHPAFLGTVPTVTQIASGAF*TEYPYG
Trigger: TCCATATGGGTACTCAGTCAAAAAGGCCCCAGATGC...GATCTGTGTCACTGTAGGTACTGTGCCCAGGAAGGCTGGGTGAAGTGACCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCTGGCAGAACCAGTTCTaGCAGGGACACTGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCWQNQF*QGHCQD
Trigger: GTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCA...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCAACAGCAGGACCAAAATaGAGCAGGCTGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: IFETHLKTSGVSHSATRATAGPK*SRLAEP
Trigger: TGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGT...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS CCA 90 bp AAAAGGGCCTGCAGGTCCTCAATTGTCACTGCGTACTCTAAGCCCTaGGATCTCAGGAAGGATTTAAATGCCTGCAGACTGACAGATGGG +
Preference number: 5 (lower is better)
Translates to: KRACRSSIVTAYSKP*DLRKDLNACRLTDG
Trigger: CCCATCTGTCAGTCTGCAGGCATTTAAATCCTTCCTGAGATCCCAGGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGGCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000222482.10
ENST00000470542.5
ENST00000486598.1
ENST00000490117.5
ENST00000492072.5
CDS CCA 90 bp CTACCTACCTGCAGGTCCTCAATTGTCACTGCGTACTCTAAGCCCTaGGATCTCAGGAAGGATTTAAATGCCTGCAGACTGACAGATGGG +
Preference number: 5 (lower is better)
Translates to: LPTCRSSIVTAYSKP*DLRKDLNACRLTDG
Trigger: CCCATCTGTCAGTCTGCAGGCATTTAAATCCTTCCTGAGATCCCAGGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGGTAGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS-3UTR CAA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCTCCTTGCCGTCCAGATaGCAGTGGCCTGGGAGATCC +
Preference number: 5 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFSLPSR*QWPGRS
Trigger: GGATCTCCCAGGCCACTGCAATCTGGACGGCAAGGA...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTTGGCAGAACCAGTTCTaGCAGGGACACTGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: RAPLTMASVRARVGTNKCWQNQF*QGHCQD
Trigger: GTCCTGGCAGTGTCCCTGCAAGAACTGGTTCTGCCA...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS GCA 90 bp AAACGAATGTCCAATCTTCACCCTCCTCGCCAGGTCAGGAAAGTCTaGGGCAATGTTGTCCATCTCGTGGTAAATAGCTTCCAGGGAATG +
Preference number: 5 (lower is better)
Translates to: KRMSNLHPPRQVRKV*GNVVHLVVNSFQGM
Trigger: CATTCCCTGGAAGCTATTTACCACGAGATGGACAACATTGCCGCAGACTTTCCTGACCTGGCGAGGAGGGTGAAGATTGGACATTCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222482.10
ENST00000470542.5
ENST00000474254.5
ENST00000490117.5
ENST00000492072.5
ENST00000493259.5
CDS GCA 90 bp AAACGAATGTCCAATCTTCACCCTCCTCGCCAGGTCAGGAAAGTCTaGGGCAATGTTGTCCATCTCGTGGTAAATCTGCAGGTCCTCAAT +
Preference number: 5 (lower is better)
Translates to: KRMSNLHPPRQVRKV*GNVVHLVVNLQVLN
Trigger: ATTGAGGACCTGCAGATTTACCACGAGATGGACAACATTGCCGCAGACTTTCCTGACCTGGCGAGGAGGGTGAAGATTGGACATTCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445470.6
ENST00000473956.5
CDS CCA 90 bp TCAGAGAAGAGAGTGGACTTGTCCAGGATGACACAGGGGCAAAGCTaGAACAAGAGCCCAGGTCTTCTTCCTCCATGTGAGCTATTATCA +
Preference number: 5 (lower is better)
Translates to: SEKRVDLSRMTQGQS*NKSPGLLPPCELLS
Trigger: TGATAATAGCTCACATGGAGGAAGAAGACCTGGGCTCTTGTTCCAGCTTTGCCCCTGTGTCATCCTGGACAAGTCCACTCTCTTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486598.1
CDS-3UTR CAA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACAACAGAAGCCAGAGCTTaGGCCGCAAGCCTCGCCACC +
Preference number: 5 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTTEARA*AASLAT
Trigger: GGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTGT...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp TGGTGTCTCCCACAGTGCCACCAGAGCAAGGTCACTGGCTTGGCTAGATGTGGACTGGTTGATGAATTCTaGCTCTACTTAGGAACTTGT +
Preference number: 5 (lower is better)
Translates to: WCLPQCHQSKVTGLARCGLVDEF*LYLGTC
Trigger: ACAAGTTCCTAAGTAGAGCAAGAATTCATCAACCAG...TCCACATCTAGCCAAGCCAGTGACCTTGCTCTGGTGGCACTGTGGGAGACACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS CCA 90 bp CCATTTTACTGCAGGTCCTCAATTGTCACTGCGTACTCTAAGCCCTaGGATCTCAGGAAGGATTTAAATGCCTGCAGACTGACAGATGGG +
Preference number: 5 (lower is better)
Translates to: PFYCRSSIVTAYSKP*DLRKDLNACRLTDG
Trigger: CCCATCTGTCAGTCTGCAGGCATTTAAATCCTTCCTGAGATCCCAGGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGTAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CCA 90 bp GGGAGAGACTGCAATGATCATCTAGTCCTGATTTCACAGATGAAATaGGGTCTCAGAGAAGAGAGTGGACTTGTCCAGGATGACACAGGG +
Preference number: 5 (lower is better)
Translates to: GRDCNDHLVLISQMK*GLREESGLVQDDTG
Trigger: CCCTGTGTCATCCTGGACAAGTCCACTCTCTTCTCTGAGACCCCATTTCATCTGTGAAATCAGGACTAGATGATCATTGCAGTCTCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486598.1
CDS-3UTR CAA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCAACAGAAGCCAGAGCTTaGGCCGCAAGCCTCGCCACC +
Preference number: 5 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPTEARA*AASLAT
Trigger: GGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTGT...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGACAGAAGCCAGAGCTTaGGCCGCAAGCCTCGCCACC +
Preference number: 5 (lower is better)
Translates to: DVDEGRESSQMFFGSKNETEARA*AASLAT
Trigger: GGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTGT...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGCAGGTGGGACCCACTaGGTACTCAGTGCCCGACAC +
Preference number: 5 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEAGGTH*VLSARH
Trigger: GTGTCGGGCACTGAGTACCAAGTGGGTCCCACCTGC...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp GCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAGGGACACTGCCACTGGTTGATGAATTCTaGCTCTACTTAGGAACTTGT +
Preference number: 5 (lower is better)
Translates to: AGPKLSRLAEPVLAGTLPLVDEF*LYLGTC
Trigger: ACAAGTTCCTAAGTAGAGCAAGAATTCATCAACCAG...TGGCAGTGTCCCTGCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS TCA 90 bp ATATCAGCTTGTGCACCACCAGGAACGCAATCAATTTGGCCGCAGTaGGCTGACCAAGGGGTTTTGACCATTTGCTTCTCCAATCTGAAA +
Preference number: 5 (lower is better)
Translates to: ISACAPPGTQSIWPQ*ADQGVLTICFSNLK
Trigger: TTTCAGATTGGAGAAGCAAATGGTCAAAACCCCTTGGTCAGCTCACTGCGGCCAAATTGATTGCGTTCCTGGTGGTGCACAAGCTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS GCA 90 bp ATCTCTCAACTCAAATGTGAATGCAAATTTGATGCCGTTGTCATATaGCCAGTCGATGCTGCTCCCGCTAGCTGGATAGACAGTGGTGCA +
Preference number: 5 (lower is better)
Translates to: ISQLKCECKFDAVVI*PVDAAPASWIDSGA
Trigger: TGCACCACTGTCTATCCAGCTAGCGGGAGCAGCATCGACTGGGCATATGACAACGGCATCAAATTTGCATTCACATTTGAGTTGAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCATCCTTGCCGTCCAGATaGCAGTGGCCTGGGAGATCC +
Preference number: 5 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPSLPSR*QWPGRS
Trigger: GGATCTCCCAGGCCACTGCAATCTGGACGGCAAGGA...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTCAGATACAATCTTCCTaGCCGTCCAGATTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: RAPLTMASVRARVGTNKCQIQSS*PSRLQW
Trigger: CCACTGCAATCTGGACGGCAAGGAAGATTGTATCTG...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp AGAGCTCCTTTAACAATGGCCTCAGTGCGTGCACGTGTGGGTACAAATAAATGTGCATCTGGGGCCTTTTaGACTGAGTACCCATATGGA +
Preference number: 5 (lower is better)
Translates to: RAPLTMASVRARVGTNKCASGAF*TEYPYG
Trigger: TCCATATGGGTACTCAGTCAAAAAGGCCCCAGATGC...ACATTTATTTGTACCCACACGTGCACGCACTGAGGCCATTGTTAAAGGAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATACATCCACAGGCCGATaGAAGGAGGAGGGAGATTTC +
Preference number: 5 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDTSTGR*KEEGDF
Trigger: GAAATCTCCCTCCTCCTTCAATCGGCCTGTGGATGT...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCGCATCTGGGGCCTTTTaGACTGAGTACCCATATGGA +
Preference number: 5 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFASGAF*TEYPYG
Trigger: TCCATATGGGTACTCAGTCAAAAAGGCCCCAGATGC...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS GCA 90 bp TTCTCAACAAATCACATGACGAAGGTCTCACTATCACCATTTTACTaGAGGTCCTCAATTGTCACTGCGTACTCTAAGCCCTGGGATCTC +
Preference number: 5 (lower is better)
Translates to: FSTNHMTKVSLSPFY*RSSIVTAYSKPWDL
Trigger: GAGATCCCAGGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGTAAAATGGTGATAGTGAGACCTTCGTCATGTGATTTGTTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS-3UTR CAA 90 bp ATCTTTGAGACCCACCTAAAGACAAGTGGTGTCTCCCACAGTGCCACCAGAGCAGGAGATTTCCAGAAATaGAGCTTCAAGTTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: IFETHLKTSGVSHSATRAGDFQK*SFKLFE
Trigger: TTCAAACAACTTGAAGCTCAATTTCTGGAAATCTCC...TGCTCTGGTGGCACTGTGGGAGACACCACTTGTCTTTAGGTGGGTCTCAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp CCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATGGTCACTTCCGTTCCAGTTTCTATTaGGGTCAGCACCAATGCAGG +
Preference number: 5 (lower is better)
Translates to: PLGQMGIISPSCNLDGHFRSSFY*GQHQCR
Trigger: CCTGCATTGGTGCTGACCCAAATAGAAACTGGAACG...GAAGTGACCATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCGCAAATTTGATGCCGTaGTCATATGCCCAGTCGATG +
Preference number: 5 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFANLMP*SYAQSM
Trigger: CATCGACTGGGCATATGACAACGGCATCAAATTTGC...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp GGAAACACAGGATACACCACAGCACAAATGGGAATGTGCCAGGGCAGTGAGATTGGAGATTTCCAGAAATaGAGCTTCAAGTTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: GNTGYTTAQMGMCQGSEIGDFQK*SFKLFE
Trigger: TTCAAACAACTTGAAGCTCAATTTCTGGAAATCTCC...AATCTCACTGCCCTGGCACATTCCCATTTGTGCTGTGGTGTATCCTGTGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGCCTGCAGGTCCTCAATaGTCACTGCGTACTCTAAGC +
Preference number: 5 (lower is better)
Translates to: DVDEGRESSQMFFGSKNEPAGPQ*SLRTLS
Trigger: GCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGG...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000222482.10
CDS-3UTR CAA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACACGTTCCAGTTTCTATTaGGGTCAGCACCAATGCAGG +
Preference number: 5 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTRSSFY*GQHQCR
Trigger: CCTGCATTGGTGCTGACCCAAATAGAAACTGGAACG...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp GAGTTCAAAAGGCAAAGAGGAGGTAAGCCCATTAGGACAGATGGGGATAATTTCAGGTCGATGAAGCCCTaGAAATTCCCATGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: EFKRQRGGKPIRTDGDNFRSMKP*KFPCFW
Trigger: CCAAAAACATGGGAATTTCAAGGGCTTCATCGACCT...GAAATTATCCCCATCTGTCCTAATGGGCTTACCTCCTCTTTGCCTTTTGAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp CTCATCAAAAACAGCAGGACCAAAATTGAGCAGGCTGGCAGAACCAGTTCTTGCAATGTGAATGCAAATTaGATGCCGTTGTCATATGCC +
Preference number: 5 (lower is better)
Translates to: LIKNSRTKIEQAGRTSSCNVNAN*MPLSYA
Trigger: GGCATATGACAACGGCATCAAATTTGCATTCACATT...GCAAGAACTGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGTTTTTGATGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp GAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGGTAGAGAGAGACATGCCAACAGCAGGACCAAAATaGAGCAGGCTGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: ESSQMFFGSKNEVERDMPTAGPK*SRLAEP
Trigger: TGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGT...TGGCATGTCTCTCTCTACCTCATTTTTAGAACCAAAGAACATCTGAGATGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS-3UTR CAA 90 bp GAGGTAAGCCCATTAGGACAGATGGGGATAATTTCACCATCCTGCAATTTAGATACATATCCATCAGGATaGGCCACAGGCAACAAGAAA +
Preference number: 5 (lower is better)
Translates to: EVSPLGQMGIISPSCNLDTYPSG*ATGNKK
Trigger: TTTCTTGTTGCCTGTGGCCAATCCTGATGGATATGT...ATCTAAATTGCAGGATGGTGAAATTATCCCCATCTGTCCTAATGGGCTTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCAACAGCAGGACCAAAATaGAGCAGGCTGGCAGAACCA +
Preference number: 5 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPTAGPK*SRLAEP
Trigger: TGGTTCTGCCAGCCTGCTCAATTTTGGTCCTGCTGT...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp TTCTTGCTCTACTTAGGAACTTGTGGTCCAGGATACAAAATAGACAGACACACAAGGTCGATGAAGCCCTaGAAATTCCCATGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: FLLYLGTCGPGYKIDRHTRSMKP*KFPCFW
Trigger: CCAAAAACATGGGAATTTCAAGGGCTTCATCGACCT...TGTGTGTCTGTCTATTTTGTATCCTGGACCACAAGTTCCTAAGTAGAGCAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp AGACCTTCACTGATATCCCTACAAGATTTGCTGCTCAAAGGAAAATATTTTCCATCTGCAGGTCCTCAATaGTCACTGCGTACTCTAAGC +
Preference number: 5 (lower is better)
Translates to: RPSLISLQDLLLKGKYFPSAGPQ*SLRTLS
Trigger: GCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGA...TGGAAAATATTTTCCTTTGAGCAGCAAATCTTGTAGGGATATCAGTGAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445470.6
CDS-3UTR CAA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGAGGTCGATGAAGCCCTaGAAATTCCCATGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: DVDEGRESSQMFFGSKNERSMKP*KFPCFW
Trigger: CCAAAAACATGGGAATTTCAAGGGCTTCATCGACCT...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS CCA 90 bp GTAGTTAGCAAAATCAGGATTTGGATCCAAATCTGTGTGGTTCCCTaGCCTATTTATGCCCTTTCTACTACAAAATGTTGTTCCTCTAAC +
Preference number: 5 (lower is better)
Translates to: VVSKIRIWIQICVVP*PIYALSTTKCCSSN
Trigger: GTTAGAGGAACAACATTTTGTAGTAGAAAGGGCATAAATAGGCCAGGGAACCACACAGATTTGGATCCAAATCCTGATTTTGCTAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS-3UTR CAA 90 bp GAATATTTATTGGCTTATAAGCACACACCAGATGCTGTACAAATCCTAGGCAGGAATGTGAATGCAAATTaGATGCCGTTGTCATATGCC +
Preference number: 5 (lower is better)
Translates to: EYLLAYKHTPDAVQILGRNVNAN*MPLSYA
Trigger: GGCATATGACAACGGCATCAAATTTGCATTCACATT...CCTGCCTAGGATTTGTACAGCATCTGGTGTGTGCTTATAAGCCAATAAATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000222482.10
ENST00000445470.6
CDS-3UTR CAA 90 bp GATGTGGATGAGGGTAGAGAATCATCTCAGATGTTCTTTGGTTCTAAAAATGAGAATGTGAATGCAAATTaGATGCCGTTGTCATATGCC +
Preference number: 5 (lower is better)
Translates to: DVDEGRESSQMFFGSKNENVNAN*MPLSYA
Trigger: GGCATATGACAACGGCATCAAATTTGCATTCACATT...CTCATTTTTAGAACCAAAGAACATCTGAGATGATTCTCTACCCTCATCCACATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS TCA 90 bp GGAGATTTCCAGAAATTGAGCTTCAAGTTGTTTGAATTCACTAGTTaGCTCAATTTGCTGATCTCGTCTCCATTTCTGACATTAATCCTC +
Preference number: 5 (lower is better)
Translates to: GDFQKLSFKLFEFTS*LNLLISSPFLTLIL
Trigger: GAGGATTAATGTCAGAAATGGAGACGAGATCAGCAAATTGAGTCAACTAGTGAATTCAAACAACTTGAAGCTCAATTTCTGGAAATCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000470542.5
ENST00000473956.5
ENST00000474254.5
ENST00000486598.1
ENST00000490117.5
ENST00000492072.5
ENST00000497388.5
CDS CAA 90 bp GTGGGACCCACTTGGTACTCAGTGCCCGACACAGAAGCCAGAGCTTaGGCCGCAAGCCTCGCCACCTTGTCGAGTTCCTCGGCATCTGGG +
Preference number: 6 (lower is better)
Translates to: VGPTWYSVPDTEARA*AASLATLSSSSASG
Trigger: CCCAGATGCCGAGGAACTCGACAAGGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTGTGTCGGGCACTGAGTACCAAGTGGGTCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS CCA 72 bp CAGATTGCAGTGGCCTGGGAGATCCACTCTCGGGAATaGATGCCTGCATTCAGCCAAACGGCCGGCCGCCTC +
Preference number: 6 (lower is better)
Translates to: QIAVAWEIHSRE*MPAFSQTAGRL
Trigger: GAGGCGGCCGGCCGTTTGGCTGAATGCAGGCATCCATTCCCGAGAGTGGATCTCCCAGGCCACTGCAATCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000473956.5
ENST00000474254.5
ENST00000493259.5
CDS CCA 72 bp TGGCGTGAGGTCCCCGAGGGTCTATGGGGCCTTGTCTaGGTGTTGCTCTGCTCCCTTTCTGCGGAGTGGACT +
Preference number: 6 (lower is better)
Translates to: WREVPEGLWGLV*VLLCSLSAEWT
Trigger: AGTCCACTCCGCAGAAAGGGAGCAGAGCAACACCCAGACAAGGCCCCATAGACCCTCGGGGACCTCACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CAA 72 bp GAGGTCCCCGAGGGTCTATGGGGCCTTGTCTGGGTGTaGCTCTGCTCCCTTTCTGCGGAGTGGACTGCTCTC +
Preference number: 6 (lower is better)
Translates to: EVPEGLWGLVWV*LCSLSAEWTAL
Trigger: GAGAGCAGTCCACTCCGCAGAAAGGGAGCAGAGCAACACCCAGACAAGGCCCCATAGACCCTCGGGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CAA 90 bp GCTGCTCCCGCTAGCTGGATAGACAGTGGTGCAGGTGGGACCCACTaGGTACTCAGTGCCCGACACAGAAGCCAGAGCTTTGGCCGCAAG +
Preference number: 6 (lower is better)
Translates to: AAPASWIDSGAGGTH*VLSARHRSQSFGRK
Trigger: CTTGCGGCCAAAGCTCTGGCTTCTGTGTCGGGCACTGAGTACCAAGTGGGTCCCACCTGCACCACTGTCTATCCAGCTAGCGGGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS CAA 90 bp AGATGGCGTGAGGTCCCCGAGGGTCTATGGGGCCTTGTCTGGGTGTaGCTCTGCTCCCTTTCTGCGGAGTGGACTGCTCTCAGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: RWREVPEGLWGLVWV*LCSLSAEWTALRGS
Trigger: TGAGCCTCTGAGAGCAGTCCACTCCGCAGAAAGGGAGCAGAGCAACACCCAGACAAGGCCCCATAGACCCTCGGGGACCTCACGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS GCA 72 bp AGACAGTGGTGCAGGTGGGACCCACTTGGTACTCAGTaGCCGACACAGAAGCCAGAGCTTTGGCCGCAAGCC +
Preference number: 6 (lower is better)
Translates to: RQWCRWDPLGTQ*PTQKPELWPQA
Trigger: GGCTTGCGGCCAAAGCTCTGGCTTCTGTGTCGGGCACTGAGTACCAAGTGGGTCCCACCTGCACCACTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS CCA 72 bp CTTGGTACTCAGTGCCCGACACAGAAGCCAGAGCTTTaGCCGCAAGCCTCGCCACCTTGTCGAGTTCCTCGG +
Preference number: 6 (lower is better)
Translates to: LGTQCPTQKPEL*PQASPPCRVPR
Trigger: CCGAGGAACTCGACAAGGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTGTGTCGGGCACTGAGTACCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS CCA 72 bp CATGCTGCAGGGGCACCCCGGCACCATCAGCATTCCTaGCTAATACCACGCAGCATGACCTTCCTTGCCGTC +
Preference number: 6 (lower is better)
Translates to: HAAGAPRHHQHS*LIPRSMTFLAV
Trigger: GACGGCAAGGAAGGTCATGCTGCGTGGTATTAGCCAGGAATGCTGATGGTGCCGGGGTGCCCCTGCAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CCA 72 bp AGGAGATGGAGATGGCGTGAGGTCCCCGAGGGTCTATaGGGCCTTGTCTGGGTGTTGCTCTGCTCCCTTTCT +
Preference number: 6 (lower is better)
Translates to: RRWRWREVPEGL*GLVWVLLCSLS
Trigger: AGAAAGGGAGCAGAGCAACACCCAGACAAGGCCCCATAGACCCTCGGGGACCTCACGCCATCTCCATCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CAA 72 bp ACTTGGTACTCAGTGCCCGACACAGAAGCCAGAGCTTaGGCCGCAAGCCTCGCCACCTTGTCGAGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: TWYSVPDTEARA*AASLATLSSSS
Trigger: CGAGGAACTCGACAAGGTGGCGAGGCTTGCGGCCAAAGCTCTGGCTTCTGTGTCGGGCACTGAGTACCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS GCA 72 bp GCATTCCTGGCTAATACCACGCAGCATGACCTTCCTTaGCGTCCAGATTGCAGTGGCCTGGGAGATCCACTC +
Preference number: 6 (lower is better)
Translates to: AFLANTTQHDLP*RPDCSGLGDPL
Trigger: GAGTGGATCTCCCAGGCCACTGCAATCTGGACGGCAAGGAAGGTCATGCTGCGTGGTATTAGCCAGGAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS GCA 72 bp AGAGGCTCAGGCCCACCTCTGCTGCATATCAGCTTGTaGACCACCAGGAACGCAATCAATTTGGCCGCAGTG +
Preference number: 6 (lower is better)
Translates to: RGSGPPLLHISL*TTRNAINLAAV
Trigger: CACTGCGGCCAAATTGATTGCGTTCCTGGTGGTGCACAAGCTGATATGCAGCAGAGGTGGGCCTGAGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS GCA 72 bp GAACTTGCAAATCACTCCGGTCTACTCTGGACTGGCTaGCTGGTCCTATGCAAGAGCAGGAGGCAGGAGGCA +
Preference number: 6 (lower is better)
Translates to: ELANHSGLLWTG*LVLCKSRRQEA
Trigger: TGCCTCCTGCCTCCTGCTCTTGCATAGGACCAGGCAGCCAGTCCAGAGTAGACCGGAGTGATTTGCAAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS CAA 72 bp TTGGCGTGGGGTCCATGGTACACTTCGGAGCAAGGGTaGTCGCTGGCTCCCTTTCCTGCAAAACTAGCGTTC +
Preference number: 6 (lower is better)
Translates to: LAWGPWYTSEQG*SLAPFPAKLAF
Trigger: GAACGCTAGTTTTGCAGGAAAGGGAGCCAGCGACAACCCTTGCTCCGAAGTGTACCATGGACCCCACGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS TCA 72 bp ATGGGGTCTCAGAGAAGAGAGTGGACTTGTCCAGGATaGCACAGGGGCAAAGCTGGAACAAGAGCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: MGSQRREWTCPG*HRGKAGTRAQV
Trigger: GACCTGGGCTCTTGTTCCAGCTTTGCCCCTGTGTCATCCTGGACAAGTCCACTCTCTTCTCTGAGACCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486598.1
CDS GCA 72 bp GCAAGAGCAGGAGGCAGGAGGCATAGTCTACCTACCTaGAGGTCCTCAATTGTCACTGCGTACTCTAAGCCC +
Preference number: 6 (lower is better)
Translates to: ARAGGRRHSLPT*RSSIVTAYSKP
Trigger: GGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGGTAGGTAGACTATGCCTCCTGCCTCCTGCTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS CCA 72 bp TTGCAAATCACTCCGGTCTACTCTGGACTGGCTGCCTaGTCCTATGCAAGAGCAGGAGGCAGGAGGCATAGT +
Preference number: 6 (lower is better)
Translates to: LQITPVYSGLAA*SYARAGGRRHS
Trigger: ACTATGCCTCCTGCCTCCTGCTCTTGCATAGGACCAGGCAGCCAGTCCAGAGTAGACCGGAGTGATTTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS CCA 72 bp ACCAGAACTTGCAAATCACTCCGGTCTACTCTGGACTaGCTGCCTGGTCCTATGCAAGAGCAGGAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: TRTCKSLRSTLD*LPGPMQEQEAG
Trigger: TCCTGCCTCCTGCTCTTGCATAGGACCAGGCAGCCAGTCCAGAGTAGACCGGAGTGATTTGCAAGTTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS TCA 72 bp CCACCTTGTCGAGTTCCTCGGCATCTGGGGCCTTTTTaGCTGAGTACCCATATGGATACATCAGCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: PPCRVPRHLGPF*LSTHMDTSAAA
Trigger: CGCAGCTGCTGATGTATCCATATGGGTACTCAGTCAAAAAGGCCCCAGATGCCGAGGAACTCGACAAGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS CAA 72 bp GCCACCTTGTCGAGTTCCTCGGCATCTGGGGCCTTTTaGACTGAGTACCCATATGGATACATCAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: ATLSSSSASGAF*TEYPYGYISSC
Trigger: GCAGCTGCTGATGTATCCATATGGGTACTCAGTCAAAAAGGCCCCAGATGCCGAGGAACTCGACAAGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS CAA 72 bp GCAGGAGGCATAGTCTACCTACCTGCAGGTCCTCAATaGTCACTGCGTACTCTAAGCCCTGGGATCTCAGGA +
Preference number: 6 (lower is better)
Translates to: AGGIVYLPAGPQ*SLRTLSPGISG
Trigger: TCCTGAGATCCCAGGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGGTAGGTAGACTATGCCTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS TCA 72 bp TGTGCACCACCAGGAACGCAATCAATTTGGCCGCAGTaGGCTGACCAAGGGGTTTTGACCATTTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: CAPPGTQSIWPQ*ADQGVLTICFS
Trigger: GGAGAAGCAAATGGTCAAAACCCCTTGGTCAGCTCACTGCGGCCAAATTGATTGCGTTCCTGGTGGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS TCA 72 bp GGATTTCGGGACCGCGTCTTCCTCCATAATCGGTTCTaGAAAAGCCACCAAGGAGGGGACAAACAACCAGAG +
Preference number: 6 (lower is better)
Translates to: GFRDRVFLHNRF*KSHQGGDKQPE
Trigger: CTCTGGTTGTTTGTCCCCTCCTTGGTGGCTTTTTCAGAACCGATTATGGAGGAAGACGCGGTCCCGAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488025.1
CDS GCA 72 bp TCTAAGCCCTGGGATCTCAGGAAGGATTTAAATGCCTaGAGACTGACAGATGGGACCAGGACATCCACAGGC +
Preference number: 6 (lower is better)
Translates to: SKPWDLRKDLNA*RLTDGTRTSTG
Trigger: GCCTGTGGATGTCCTGGTCCCATCTGTCAGTCTGCAGGCATTTAAATCCTTCCTGAGATCCCAGGGCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000470542.5
ENST00000473956.5
ENST00000474254.5
ENST00000486598.1
ENST00000490117.5
ENST00000492072.5
ENST00000497388.5
CDS GCA 72 bp TCCAATCTTCACCCTCCTCGCCAGGTCAGGAAAGTCTaGGGCAATGTTGTCCATCTCGTGGTAAATCTGCAG +
Preference number: 6 (lower is better)
Translates to: SNLHPPRQVRKV*GNVVHLVVNLQ
Trigger: CTGCAGATTTACCACGAGATGGACAACATTGCCGCAGACTTTCCTGACCTGGCGAGGAGGGTGAAGATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445470.6
ENST00000473956.5
CDS GCA 72 bp TCCAATCTTCACCCTCCTCGCCAGGTCAGGAAAGTCTaGGGCAATGTTGTCCATCTCGTGGTAAATAGCTTC +
Preference number: 6 (lower is better)
Translates to: SNLHPPRQVRKV*GNVVHLVVNSF
Trigger: GAAGCTATTTACCACGAGATGGACAACATTGCCGCAGACTTTCCTGACCTGGCGAGGAGGGTGAAGATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000222482.10
ENST00000470542.5
ENST00000474254.5
ENST00000490117.5
ENST00000492072.5
ENST00000493259.5
CDS CCA 72 bp TCTCAGGAAGGATTTAAATGCCTGCAGACTGACAGATaGGACCAGGACATCCACAGGCCGATTGAAGGAGGA +
Preference number: 6 (lower is better)
Translates to: SQEGFKCLQTDR*DQDIHRPIEGG
Trigger: TCCTCCTTCAATCGGCCTGTGGATGTCCTGGTCCCATCTGTCAGTCTGCAGGCATTTAAATCCTTCCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000470542.5
ENST00000473956.5
ENST00000474254.5
ENST00000486598.1
ENST00000490117.5
ENST00000492072.5
ENST00000497388.5
CDS CCA 72 bp ATAAAACCAGAACTTGCAAATCACTCCGGTCTACTCTaGACTGGCTGCCTGGTCCTATGCAAGAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: IKPELANHSGLL*TGCLVLCKSRR
Trigger: CCTCCTGCTCTTGCATAGGACCAGGCAGCCAGTCCAGAGTAGACCGGAGTGATTTGCAAGTTCTGGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497388.5
CDS CAA 72 bp TCTGGTAATCAGATACAATCTTCCTTGCCGTCCAGATaGCAGTGGCCTGGGAGATCCACTCTCGGGAATGGA +
Preference number: 6 (lower is better)
Translates to: SGNQIQSSLPSR*QWPGRSTLGNG
Trigger: TCCATTCCCGAGAGTGGATCTCCCAGGCCACTGCAATCTGGACGGCAAGGAAGATTGTATCTGATTACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000473956.5
ENST00000493259.5
CDS CAA 72 bp ATGAAATCTACCACTGATTTCACCTCCACTTCCGAATaGGCGTGGGGTCCATGGTACACTTCGGAGCAAGGG +
Preference number: 6 (lower is better)
Translates to: MKSTTDFTSTSE*AWGPWYTSEQG
Trigger: CCCTTGCTCCGAAGTGTACCATGGACCCCACGCCAATTCGGAAGTGGAGGTGAAATCAGTGGTAGATTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS TCA 72 bp ACCACCAGGAACGCAATCAATTTGGCCGCAGTGAGCTaGCCAAGGGGTTTTGACCATTTGCTTCTCCAATCT +
Preference number: 6 (lower is better)
Translates to: TTRNAINLAAVS*PRGFDHLLLQS
Trigger: AGATTGGAGAAGCAAATGGTCAAAACCCCTTGGTCAGCTCACTGCGGCCAAATTGATTGCGTTCCTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CCA 72 bp TGCAGGTCCTCAATTGTCACTGCGTACTCTAAGCCCTaGGATCTCAGGAAGGATTTAAATGCCTGCAGACTG +
Preference number: 6 (lower is better)
Translates to: CRSSIVTAYSKP*DLRKDLNACRL
Trigger: CAGTCTGCAGGCATTTAAATCCTTCCTGAGATCCCAGGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000470542.5
ENST00000473956.5
ENST00000474254.5
ENST00000486598.1
ENST00000490117.5
ENST00000492072.5
ENST00000497388.5
CDS CAA 90 bp AATGCCTGCAGACTGACAGATGGGACCAGGACATCCACAGGCCGATaGAAGGAGGAGGGAGATTTCCAGAAATTGAGCTTCAAGTTGTTT +
Preference number: 6 (lower is better)
Translates to: NACRLTDGTRTSTGR*KEEGDFQKLSFKLF
Trigger: AAACAACTTGAAGCTCAATTTCTGGAAATCTCCCTCCTCCTTCAATCGGCCTGTGGATGTCCTGGTCCCATCTGTCAGTCTGCAGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000470542.5
ENST00000473956.5
ENST00000474254.5
ENST00000486598.1
ENST00000490117.5
ENST00000492072.5
ENST00000497388.5
CDS GCA 72 bp CTCAAATGTGAATGCAAATTTGATGCCGTTGTCATATaGCCAGTCGATGCTGCTCCCGCTAGCTGGATAGAC +
Preference number: 6 (lower is better)
Translates to: LKCECKFDAVVI*PVDAAPASWID
Trigger: GTCTATCCAGCTAGCGGGAGCAGCATCGACTGGGCATATGACAACGGCATCAAATTTGCATTCACATTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS CCA 72 bp TCCCTTTCCTGCAAAACTAGCGTTCCAGTTTCTATTTaGGTCAGCACCAATGCAGGAGCTTCCAGGATTTCG +
Preference number: 6 (lower is better)
Translates to: SLSCKTSVPVSI*VSTNAGASRIS
Trigger: CGAAATCCTGGAAGCTCCTGCATTGGTGCTGACCCAAATAGAAACTGGAACGCTAGTTTTGCAGGAAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS CAA 72 bp AGGTCTCACTATCACCATTTTACTGCAGGTCCTCAATaGTCACTGCGTACTCTAAGCCCTGGGATCTCAGGA +
Preference number: 6 (lower is better)
Translates to: RSHYHHFTAGPQ*SLRTLSPGISG
Trigger: TCCTGAGATCCCAGGGCTTAGAGTACGCAGTGACAATTGAGGACCTGCAGTAAAATGGTGATAGTGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS CAA 72 bp TCTCTCAACTCAAATGTGAATGCAAATTTGATGCCGTaGTCATATGCCCAGTCGATGCTGCTCCCGCTAGCT +
Preference number: 6 (lower is better)
Translates to: SLNSNVNANLMP*SYAQSMLLPLA
Trigger: AGCTAGCGGGAGCAGCATCGACTGGGCATATGACAACGGCATCAAATTTGCATTCACATTTGAGTTGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS CAA 72 bp GTCCCGGTATCTCTCAACTCAAATGTGAATGCAAATTaGATGCCGTTGTCATATGCCCAGTCGATGCTGCTC +
Preference number: 6 (lower is better)
Translates to: VPVSLNSNVNAN*MPLSYAQSMLL
Trigger: GAGCAGCATCGACTGGGCATATGACAACGGCATCAAATTTGCATTCACATTTGAGTTGAGAGATACCGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS TCA 72 bp CTTGAAATTCCCATGTTTTTGGATGAAATCTACCACTaGTTTCACCTCCACTTCCGAATTGGCGTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LEIPMFLDEIYH*FHLHFRIGVGS
Trigger: GGACCCCACGCCAATTCGGAAGTGGAGGTGAAATCAGTGGTAGATTTCATCCAAAAACATGGGAATTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000488025.1
ENST00000493259.5
CDS TCA 72 bp AAGCTGGAACAAGAGCCCAGGTCTTCTTCCTCCATGTaGGCTATTATCAGCCATTCATTTTCAGTTCCATTT +
Preference number: 6 (lower is better)
Translates to: KLEQEPRSSSSM*AIISHSFSVPF
Trigger: AAATGGAACTGAAAATGAATGGCTGATAATAGCTCACATGGAGGAAGAAGACCTGGGCTCTTGTTCCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486598.1
CDS CCA 72 bp GAAAATATCCATTTTCTCCAAGATGGAGGTGATAGCTaGATCCCTCTGGTAATCAGATACAATCTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: ENIHFLQDGGDS*IPLVIRYNLPC
Trigger: GCAAGGAAGATTGTATCTGATTACCAGAGGGATCCAGCTATCACCTCCATCTTGGAGAAAATGGATATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000493259.5
CDS CAA 90 bp CTGCTCCGTTCTTGCCCTTCATTGTGTTGCATTTCATCATCTTCATaGTCTAAAAGGGCATTTAATCCTGAGTCTTCTCAACAAATCACA +
Preference number: 6 (lower is better)
Translates to: LLRSCPSLCCISSSS*SKRAFNPESSQQIT
Trigger: TGTGATTTGTTGAGAAGACTCAGGATTAAATGCCCTTTTAGACAATGAAGATGATGAAATGCAACACAATGAAGGGCAAGAACGGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474254.5
CDS TCA 72 bp CAGAAATTGAGCTTCAAGTTGTTTGAATTCACTAGTTaGCTCAATTTGCTGATCTCGTCTCCATTTCTGACA +
Preference number: 6 (lower is better)
Translates to: QKLSFKLFEFTS*LNLLISSPFLT
Trigger: TGTCAGAAATGGAGACGAGATCAGCAAATTGAGTCAACTAGTGAATTCAAACAACTTGAAGCTCAATTTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000222482.10
ENST00000445470.6
ENST00000470542.5
ENST00000473956.5
ENST00000474254.5
ENST00000486598.1
ENST00000490117.5
ENST00000492072.5
ENST00000497388.5