Pregenerated sensors for CPA3 (Homo sapiens)
Ensembl gene IDs: ENSG00000163751Ensembl transcript IDs: ENST00000296046.4, ENST00000477926.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACAGAGAAGGATTCAGGTaGAATAGAAGCTGCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHREGFR*NRSCIW Trigger: CCAAATGCAGCTTCTATTTCACCTGAATCCTTCTCT...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| 3UTR-3UTR CCA 90 bp | TGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAACAGCAGTAACATaGGACTTAAATGAGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: CISPFKIMLSAGSKLHLEQTAVT*DLNEQE Trigger: CTCTTGCTCATTTAAGTCCCATGTTACTGCTGTTTG...CTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| 3UTR-3UTR TCA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGGGGATAACTGAAGATTaGCTTTCTGATGAAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: VVKRFHLKLLRYGATESKGITED*LSDERH Trigger: GTGCCTTTCATCAGAAAGTCAATCTTCAGTTATCCC...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| 3UTR CAA 90 bp | ATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTaGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTT | + |
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Preference number: 2 (lower is better) Translates to: ISPFKIMLSAGSKLH*EQRKVVKRFHLKLL Trigger: AAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| 3UTR CCA 72 bp | CCACTGTATATCACCTTTCAAAATAATGCTTTCTGCTaGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: PLYITFQNNAFC*VQTSLGAKKGS Trigger: ACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAGCAGCTACGTGGTaGGTGGCACCTGGATACCAG | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHLAATW*VAPGYQ Trigger: CTGGTATCCAGGTGCCACCCACCACGTAGCTGCTAA...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | CCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGCCACTGGCAGAATGCTaGGGAGACCCATTCTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: PFKIMLSAGSKLHLEQRKPLAEC*GDPFSC Trigger: GCACGAGAATGGGTCTCCCCAGCATTCTGCCAGTGG...CTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACGGAGACCCATTCTCGTaGGTGAATGCCACAATCCGT | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHGDPFS*VNATIR Trigger: ACGGATTGTGGCATTCACGCACGAGAATGGGTCTCC...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | CTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCAGCTACGTGGTGGGTaGCACCTGGATACCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LSAGSKLHLEQRKVVKRFQLRGG*HLDTRS Trigger: ACTTCTGGTATCCAGGTGCCACCCACCACGTAGCTG...AAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR TCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACACCCATTCTCGTGCGTaGATGCCACAATCCGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHTHSRA*MPQSVK Trigger: TTTTACGGATTGTGGCATTCACGCACGAGAATGGGT...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACGCCCCGATAGTTATCTaGACATGGGTCATTGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHAPIVI*TWVIGV Trigger: AACACCAATGACCCATGTGCAGATAACTATCGGGGC...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACGCAGACTGGATGGCTTaGGATTCCTTCTCACTAACT | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHADWMA*DSFSLT Trigger: AGTTAGTGAGAAGGAATCCCAAGCCATCCAGTCTGC...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | TGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGGGTCTCTCTGCACGTTaGCTTTATCCGGGATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CISPFKIMLSAGSKLHLEGLSAR*LYPGFW Trigger: CCAGAATCCCGGATAAAGCCAACGTGCAGAGAGACC...CTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | CCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGCGGACAGGAGCAATTaGAAGAGTGGTAGCAATCAA | + |
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Preference number: 4 (lower is better) Translates to: PFKIMLSAGSKLHLEQRKADRSN*KSGSNQ Trigger: TTGATTGCTACCACTCTTGCAATTGCTCCTGTCCGC...CTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACCCAATTATTGTATTTTaGGTAGCTGTGCCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHPIIVF*VAVPAW Trigger: CCAGGCAGGCACAGCTACGCAAAATACAATAATTGG...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACATCAGTGCCAATCTTTaGAACTTTGGCCAAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHISANL*NFGQVL Trigger: GAGGACTTGGCCAAAGTTGCAAAGATTGGCACTGAT...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | TGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGATATTAGCAGCTACGTaGTGGGTGGCACCTGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: CISPFKIMLSAGSKLHLEILAAT*WVAPGY Trigger: GTATCCAGGTGCCACCCACCACGTAGCTGCTAATAT...CTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | CAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTAAACCACTGGCAGAATaGTGGGGAGACCCATTCTCG | + |
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Preference number: 4 (lower is better) Translates to: QRKVVKRFHLKLLRYGATKPLAE*WGDPFS Trigger: CGAGAATGGGTCTCCCCAGCATTCTGCCAGTGGTTT...AGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGCTAGCATGGTCTCTCTaGACGTTGGCTTTATCCGGG | + |
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Preference number: 4 (lower is better) Translates to: VVKRFHLKLLRYGATESKLAWSL*TLALSG Trigger: CCCGGATAAAGCCAACGTGCAGAGAGACCATGCTAG...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | CAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGCTTGTTTTTCATCCTaGGGCTTCACGCGGAACACC | + |
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Preference number: 4 (lower is better) Translates to: QRKVVKRFHLKLLRYGATACFSS*GFTRNT Trigger: GGTGTTCCGCGTGAAGCCCCAGGATGAAAAACAAGC...AGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | TTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTCCAAGGCAGACTGGATaGCTTGGGATTCCTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LEQRKVVKRFHLKLLRYGPRQTG*LGIPSH Trigger: GTGAGAAGGAATCCCAAGCCATCCAGTCTGCCTTGG...ACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | CACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATCTCTTTCTCGGACTCTaGTGCAGAGCCCCGATAGTT | + |
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Preference number: 4 (lower is better) Translates to: HLEQRKVVKRFHLKLLRYLFLGL*CRAPIV Trigger: AACTATCGGGGCTCTGCACCAGAGTCCGAGAAAGAG...ATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR TCA 90 bp | TTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTAACCCACAGGCAGGATaGGCCTCATGGTTCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LEQRKVVKRFHLKLLRYGNPQAG*ASWFFF Trigger: AAAGAAGAACCATGAGGCTCATCCTGCCTGTGGGTT...ACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR TCA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGAGGCAAATGTGTGTTTaGTGCCCAGGTCATAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VVKRFHLKLLRYGATESKRQMCV*CPGHKP Trigger: GGGCTTATGACCTGGGCATCAAACACACATTTGCCT...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGTTTCTCGGACTCTGGTaGAGAGCCCCGATAGTTATC | + |
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Preference number: 4 (lower is better) Translates to: VVKRFHLKLLRYGATESKFLGLW*RAPIVI Trigger: GATAACTATCGGGGCTCTGCACCAGAGTCCGAGAAA...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTCTCCCATAAGTTTTaGTTGCCTGATAGACAAACC | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHFSHKF*LPDRQT Trigger: GGTTTGTCTATCAGGCAACCAAAACTTATGGGAGAA...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | TCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACATAGTTATCTGCACATaGGTCATTGGTGTTAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SAGSKLHLEQRKVVKRFHIVICT*VIGVRN Trigger: ATTCCTAACACCAATGACCCATGTGCAGATAACTAT...GTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | TTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTCAGTGCCGATGCATTTaGAGTTTTGGTTCTTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LEQRKVVKRFHLKLLRYGQCRCI*SFGSWN Trigger: GTTCCAAGAACCAAAACTCCAAATGCATCGGCACTG...ACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGTTGGCCAAGTCCTCATaGTTAGGTGGCAGTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: VVKRFHLKLLRYGATESKLAKSS*LGGSFD Trigger: ATCAAAACTGCCACCTAACCATGAGGACTTGGCCAA...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | CACTGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGAATAATGCTTTCTGCTaGGTCCAAACTTCACTTGGA | + |
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Preference number: 4 (lower is better) Translates to: HCISPFKIMLSAGSKLHLNNAFC*VQTSLG Trigger: TCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATT...CAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR TCA 90 bp | TGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGAGGAATGGAGTTCCATaGAGCATTAAAATTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: CISPFKIMLSAGSKLHLERNGVP*SIKIPV Trigger: AACAGGAATTTTAATGCTTCATGGAACTCCATTCCT...CTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR TCA 90 bp | CAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGGGATAACTGAAGATTaGCTTTCTGATGAAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QRKVVKRFHLKLLRYGATGITED*LSDERH Trigger: GTGCCTTTCATCAGAAAGTCAATCTTCAGTTATCCC...AGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR TCA 90 bp | CACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATAGAGAAGGATTCAGGTaGAATAGAAGCTGCATTTGG | + |
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Preference number: 4 (lower is better) Translates to: HLEQRKVVKRFHLKLLRYREGFR*NRSCIW Trigger: CCAAATGCAGCTTCTATTTCACCTGAATCCTTCTCT...ATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGGTCCTTTATGATGTCTaGTTGTTTTTCATCCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VVKRFHLKLLRYGATESKVLYDV*LFFILG Trigger: CCCCAGGATGAAAAACAAGCAGACATCATAAAGGAC...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | CACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATCCCATAAGTTTTGGTTaGCTGATAGACAAACCACTG | + |
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Preference number: 4 (lower is better) Translates to: HLEQRKVVKRFHLKLLRYPISFG*LIDKPL Trigger: CAGTGGTTTGTCTATCAGGCAACCAAAACTTATGGG...ATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | CACTGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGCAAAATAATGCTTTCTaGTGGGTCCAAACTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: HCISPFKIMLSAGSKLHLQNNAF*WVQTSL Trigger: AAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTG...CAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | CACTGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGTTCATTTGTTTTCTGTaGCCCACTGTATATCACCTT | + |
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Preference number: 4 (lower is better) Translates to: HCISPFKIMLSAGSKLHLFICFL*PTVYHL Trigger: AAGGTGATATACAGTGGGGCACAGAAAACAAATGAA...CAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR TCA 90 bp | CACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGTTAGGTGGCAGTTTTaGTGTATATCCATAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: HLEQRKVVKRFHLKLLRYVRWQF*CISIGK Trigger: TTTCCCTATGGATATACATCAAAACTGCCACCTAAC...ATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | CACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATCAAACAGCAGTAACATaGGACTTAAATGAGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: HLEQRKVVKRFHLKLLRYQTAVT*DLNEQE Trigger: CTCTTGCTCATTTAAGTCCCATGTTACTGCTGTTTG...ATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR TCA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGTATCGGGTAAATTGTTaGTTCTATTGGGCCATAGAT | + |
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Preference number: 4 (lower is better) Translates to: VVKRFHLKLLRYGATESKYRVNC*FYWAID Trigger: ATCTATGGCCCAATAGAATCAACAATTTACCCGATA...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR GCA 90 bp | CAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTTTGATAGAACATCAGTaGCAATCTTTGCAACTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QRKVVKRFHLKLLRYGATLIEHQ*QSLQLW Trigger: CCAAAGTTGCAAAGATTGGCACTGATGTTCTATCAA...AGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CCA 90 bp | CAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTCTTTATCCGGGATTCTaGAAGGAGAAAACCAAATTT | + |
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Preference number: 4 (lower is better) Translates to: QRKVVKRFHLKLLRYGATLYPGF*KEKTKF Trigger: AAATTTGGTTTTCTCCTTCCAGAATCCCGGATAAAG...AGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS GCA 90 bp | CTTCACGCGGAACACCTTCTCCCTGTCAAAGCGGACAGGAGCAATTaGAAGAGTGGTAGCAATCAAACCCACAGGCAGGATGAGCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LHAEHLLPVKADRSN*KSGSNQTHRQDEPH Trigger: ATGAGGCTCATCCTGCCTGTGGGTTTGATTGCTACCACTCTTGCAATTGCTCCTGTCCGCTTTGACAGGGAGAAGGTGTTCCGCGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS CCA 90 bp | GCTTCTAATGAAATTAGTGACAGCTTTCGTCTCTTTCTCGGACTCTaGTGCAGAGCCCCGATAGTTATCTGCACATGGGTCATTGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: ASNEISDSFRLFLGL*CRAPIVICTWVIGV Trigger: AACACCAATGACCCATGTGCAGATAACTATCGGGGCTCTGCACCAGAGTCCGAGAAAGAGACGAAAGCTGTCACTAATTTCATTAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296046.4 ENST00000477926.1 |
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| CDS-3UTR CAA 90 bp | CCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGGCAGACTGGATGGCTaGGGATTCCTTCTCACTAAC | + |
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Preference number: 5 (lower is better) Translates to: PFKIMLSAGSKLHLEQRKGRLDG*GFLLTN Trigger: GTTAGTGAGAAGGAATCCCAAGCCATCCAGTCTGCC...CTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCAGAAGTCAAGCTCATaGGTTTTGGCCAAGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: LSAGSKLHLEQRKVVKRFQKSSS*VLAKSF Trigger: AAAGGACTTGGCCAAAACCAATGAGCTTGACTTCTG...AAACCTTTTAACTACCTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | TGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGCATCAGTGCCAATCTTaGCAACTTTGGCCAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: CISPFKIMLSAGSKLHLEHQCQS*QLWPSP Trigger: AGGACTTGGCCAAAGTTGCAAAGATTGGCACTGATG...CTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATTGGTCTCTCTGCACGTaGGCTTTATCCGGGATTCTG | + |
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Preference number: 5 (lower is better) Translates to: HLEQRKVVKRFHLKLLRYWSLCT*ALSGIL Trigger: CAGAATCCCGGATAAAGCCAACGTGCAGAGAGACCA...ATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGTCCACATGCGGTTCTTaGTCCATGACCAAATATATC | + |
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Preference number: 5 (lower is better) Translates to: PFKIMLSAGSKLHLEQRKSTCGS*SMTKYI Trigger: GATATATTTGGTCATGGACAAAGAACCGCATGTGGA...CTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CACTGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGCATTAAAATTCCTGTaGAGGTCAGTGCCGATGCAT | + |
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Preference number: 5 (lower is better) Translates to: HCISPFKIMLSAGSKLHLALKFL*RSVPMH Trigger: ATGCATCGGCACTGACCTCAACAGGAATTTTAATGC...CAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGAAATTGTTGATTCTATaGGGCCATAGATGTAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: PFKIMLSAGSKLHLEQRKKLLIL*GHRCSG Trigger: CCCGCTACATCTATGGCCCAATAGAATCAACAATTT...CTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGCCCAATTATTGTATTTaGCGTAGCTGTGCCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: VVKRFHLKLLRYGATESKPNYCI*RSCACL Trigger: CAGGCAGGCACAGCTACGCAAAATACAATAATTGGG...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATTCTGCACATGGGTCATaGGTGTTAGGAATGGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: HLEQRKVVKRFHLKLLRYSAHGS*VLGMEF Trigger: GAACTCCATTCCTAACACCAATGACCCATGTGCAGA...ATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CACTGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGGGTTTCATATCGAGTaGATAGAACATCAGTGCCAA | + |
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Preference number: 5 (lower is better) Translates to: HCISPFKIMLSAGSKLHLGFHIE*IEHQCQ Trigger: TTGGCACTGATGTTCTATCAACTCGATATGAAACCC...CAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGGAGCAAAGAAAGCTGATATCGGGTAAATaGTTGATTCTATTGGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: PFKIMLSAGSKLHLEQRKLISGK*LILLGH Trigger: ATGGCCCAATAGAATCAACAATTTACCCGATATCAG...CTTTCTTTGCTCCAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | TTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTTCAGTGCCGATGCATTaGGAGTTTTGGTTCTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LEQRKVVKRFHLKLLRYGSVPMH*EFWFLE Trigger: TTCCAAGAACCAAAACTCCAAATGCATCGGCACTGA...ACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGTCAAGCTCATTGGTTTaGGCCAAGTCCTTTATGATG | + |
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Preference number: 5 (lower is better) Translates to: VVKRFHLKLLRYGATESKSSSLV*AKSFMM Trigger: CATCATAAAGGACTTGGCCAAAACCAATGAGCTTGA...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | TTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTTCCCATAAGTTTTGGTaGCCTGATAGACAAACCACT | + |
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Preference number: 5 (lower is better) Translates to: LEQRKVVKRFHLKLLRYGSHKFW*PDRQTT Trigger: AGTGGTTTGTCTATCAGGCAACCAAAACTTATGGGA...ACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CACTGTATATCACCTTTCAAAATAATGCTTTCTGCTGGGTCCAAACTTCACTTGATTCGGTCCAAGAGTTaGGTCATAATTTTGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: HCISPFKIMLSAGSKLHLIRSKS*VIILFL Trigger: GAGAAACAAAATTATGACCAAACTCTTGGACCGAAT...CAAGTGAAGTTTGGACCCAGCAGAAAGCATTATTTTGAAAGGTGATATACAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CACTTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATTACTTGGCAATAAATTaGACAGCTAGCATGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: HLEQRKVVKRFHLKLLRYYLAIN*TASMVS Trigger: AGAGACCATGCTAGCTGTCAAATTTATTGCCAAGTA...ATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | GTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGAAAGTAAGATAGTGCATTTTATTTaGATCCAAGGCAGACTGGAT | + |
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Preference number: 5 (lower is better) Translates to: VVKRFHLKLLRYGATESKIVHFI*IQGRLD Trigger: ATCCAGTCTGCCTTGGATCAAAATAAAATGCACTAT...CTTACTTTCAGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | CAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTGCTACTGATGCATTTGGAGTTTaGGTTCTTGGAACGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: QRKVVKRFHLKLLRYGATDAFGV*VLGTIF Trigger: AAAAATCGTTCCAAGAACCAAAACTCCAAATGCATC...AGTAGCACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | TTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTATATCGGGTAAATTGTaGATTCTATTGGGCCATAGA | + |
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Preference number: 5 (lower is better) Translates to: LEQRKVVKRFHLKLLRYGISGKL*ILLGHR Trigger: TCTATGGCCCAATAGAATCAACAATTTACCCGATAT...ACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS-3UTR CAA 90 bp | TTGGAGCAAAGAAAGGTAGTTAAAAGGTTTCACTTAAAGCTACTTCGTTATGGTTGCTTGAGGATATACTaGGCAATAAATTTGACAGCT | + |
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Preference number: 5 (lower is better) Translates to: LEQRKVVKRFHLKLLRYGCLRIY*AINLTA Trigger: AGCTGTCAAATTTATTGCCAAGTATATCCTCAAGCA...ACCATAACGAAGTAGCTTTAAGTGAAACCTTTTAACTACCTTTCTTTGCTCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS GCA 72 bp | GAACACCTTCTCCCTGTCAAAGCGGACAGGAGCAATTaGAAGAGTGGTAGCAATCAAACCCACAGGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: EHLLPVKADRSN*KSGSNQTHRQD Trigger: ATCCTGCCTGTGGGTTTGATTGCTACCACTCTTGCAATTGCTCCTGTCCGCTTTGACAGGGAGAAGGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS GCA 72 bp | TTTCTCGGACTCTGGTGCAGAGCCCCGATAGTTATCTaGACATGGGTCATTGGTGTTAGGAATGGAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: FLGLWCRAPIVI*TWVIGVRNGVP Trigger: TGGAACTCCATTCCTAACACCAATGACCCATGTGCAGATAACTATCGGGGCTCTGCACCAGAGTCCGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296046.4 ENST00000477926.1 |
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| CDS CCA 72 bp | GCCAAGTCCTTTATGATGTCTGCTTGTTTTTCATCCTaGGGCTTCACGCGGAACACCTTCTCCCTGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AKSFMMSACFSS*GFTRNTFSLSK Trigger: CTTTGACAGGGAGAAGGTGTTCCGCGTGAAGCCCCAGGATGAAAAACAAGCAGACATCATAAAGGACTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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| CDS CCA 72 bp | GAAATTAGTGACAGCTTTCGTCTCTTTCTCGGACTCTaGTGCAGAGCCCCGATAGTTATCTGCACATGGGTC | + |
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Preference number: 6 (lower is better) Translates to: EISDSFRLFLGL*CRAPIVICTWV Trigger: GACCCATGTGCAGATAACTATCGGGGCTCTGCACCAGAGTCCGAGAAAGAGACGAAAGCTGTCACTAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296046.4 ENST00000477926.1 |
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| CDS GCA 72 bp | TGTAGCGGGTTTCATATCGAGTTGATAGAACATCAGTaGCAATCTTTGCAACTTTGGCCAAGTCCTCATGGT | + |
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Preference number: 6 (lower is better) Translates to: CSGFHIELIEHQ*QSLQLWPSPHG Trigger: ACCATGAGGACTTGGCCAAAGTTGCAAAGATTGGCACTGATGTTCTATCAACTCGATATGAAACCCGCTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296046.4 ENST00000477926.1 |
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| CDS CAA 90 bp | TCATTGGTGTTAGGAATGGAGTTCCATGAAGCATTAAAATTCCTGTaGAGGTCAGTGCCGATGCATTTGGAGTTTTGGTTCTTGGAACGA | + |
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Preference number: 6 (lower is better) Translates to: SLVLGMEFHEALKFL*RSVPMHLEFWFLER Trigger: TCGTTCCAAGAACCAAAACTCCAAATGCATCGGCACTGACCTCAACAGGAATTTTAATGCTTCATGGAACTCCATTCCTAACACCAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000296046.4 ENST00000477926.1 |
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| CDS CAA 90 bp | TTGTTGATTCTATTGGGCCATAGATGTAGCGGGTTTCATATCGAGTaGATAGAACATCAGTGCCAATCTTTGCAACTTTGGCCAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLILLGHRCSGFHIE*IEHQCQSLQLWPSP Trigger: AGGACTTGGCCAAAGTTGCAAAGATTGGCACTGATGTTCTATCAACTCGATATGAAACCCGCTACATCTATGGCCCAATAGAATCAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000296046.4 ENST00000477926.1 |
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| CDS CAA 72 bp | AAGAAGAACCTGATATCGGGTAAATTGTTGATTCTATaGGGCCATAGATGTAGCGGGTTTCATATCGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: KKNLISGKLLIL*GHRCSGFHIEL Trigger: CAACTCGATATGAAACCCGCTACATCTATGGCCCAATAGAATCAACAATTTACCCGATATCAGGTTCTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000296046.4 |
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