Pregenerated sensors for CPA2 (Homo sapiens)
Ensembl gene IDs: ENSG00000158516Ensembl transcript IDs: ENST00000222481.9, ENST00000416698.1, ENST00000480781.5, ENST00000487259.5
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGCTGTCCAAAGTGCCGTAGCTTGTGTAACCCACTCTCGAGCATaGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTCCGGTG | + |
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Preference number: 1 (lower is better) Translates to: FAVQSAVACVTHSRA*IPASSQIAGLSPPV Trigger: CACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| 3UTR CCA 90 bp | TGGCAGGAGGAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATaGGTCCTTTCCATAATCAGAAACAATCTTATTTGCTGTCCAAAG | + |
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Preference number: 1 (lower is better) Translates to: WQEEDIQGIQNGSDG*VLSIIRNNLICCPK Trigger: CTTTGGACAGCAAATAAGATTGTTTCTGATTATGGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTCCTCCTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| 3UTR-3UTR CCA 90 bp | GGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCATAATCAGAAACAATCTTATCCAGCCAGATAGCTaGCTTGTCTCCTCCGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GIQNGSDGWVLSIIRNNLIQPDS*LVSSGA Trigger: AGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGAT...AAGATTGTTTCTGATTATGGAAAGGACCCATCCATCACTTCCATTCTGGATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| 3UTR CAA 90 bp | TCCATAATCAGAAACAATCTTATTTGCTGTCCAAAGTGCCGTAGCTaGTGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SIIRNNLICCPKCRS*CNPLSSMDPSIQPD Trigger: ATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGTTTCTGATTATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| 3UTR-3UTR GCA 90 bp | GAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCATAATCAGAAACAATCTTATTTaGTGTCCAAAGTGCCGTAGC | + |
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Preference number: 2 (lower is better) Translates to: EDIQGIQNGSDGWVLSIIRNNLI*CPKCRS Trigger: GCTACGGCACTTTGGACAGCAAATAAGATTGTTTCT...GATTATGGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| 3UTR CCA 72 bp | CAAAGTGCCGTAGCTTGTGTAACCCACTCTCGAGCATaGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: QSAVACVTHSRA*IPASSQIAGLS Trigger: AGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| 3UTR GCA 72 bp | TCCATAATCAGAAACAATCTTATTTGCTGTCCAAAGTaGCGTAGCTTGTGTAACCCACTCTCGAGCATGGAT | + |
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Preference number: 3 (lower is better) Translates to: SIIRNNLICCPK*RSLCNPLSSMD Trigger: ATCCATGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGTTTCTGATTATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| 3UTR CCA 72 bp | GAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATaGGTCCTTTCCATAATCAGAAACAATCTTATTTGC | + |
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Preference number: 3 (lower is better) Translates to: EDIQGIQNGSDG*VLSIIRNNLIC Trigger: GCAAATAAGATTGTTTCTGATTATGGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CCA 90 bp | CTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTCCGGTATCCAGCCAGATAGCTaGCTTGTCTCCTCCGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LSSMDPSIQPDSWLVSSGIQPDS*LVSSGA Trigger: AGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGAT...ACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR GCA 90 bp | TGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCCTCACTAGACCAGGGTaGTCAGCCACGAGGTTATCC | + |
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Preference number: 4 (lower is better) Translates to: CNPLSSMDPSIQPDSWLVLTRPG*SATRLS Trigger: GGATAACCTCGTGGCTGAGCACCCTGGTCTAGTGAG...GACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR GCA 90 bp | AGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTCCGGTGCTGAACAAGAACACTTTGACTaGCTGGACGTTGACGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SMDPSIQPDSWLVSSGAEQEHFD*LDVDEG Trigger: CCCTTCGTCAACGTCCAGGCAGTCAAAGTGTTCTTG...TTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CCA 90 bp | TGTGACTGGCAGGAGGAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGACCCACTCTCGAGCATaGATCCCAGCATCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CDWQEEDIQGIQNGSDGWTHSRA*IPASSQ Trigger: CTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGT...CCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTCCTCCTGCCAGTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR TCA 90 bp | ATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTCCGGTGCTGAACTTGGTAGGCCCCAAAATTaGAGTTACCACTCCGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: MDPSIQPDSWLVSSGAELGRPQN*SYHSVL Trigger: GAGAACGGAGTGGTAACTTCAATTTTGGGGCCTACC...AAGTTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CCA 90 bp | ACAATCTTATTTGCTGTCCAAAGTGCCGTAGCTTGTGTAACCCACTCTCGAGCAAAGGGAACTCGGACGTaGGCTGTCTCCCCTGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: TILFAVQSAVACVTHSRAKGTRT*AVSPGV Trigger: CACCCCAGGGGAGACAGCCCACGTCCGAGTTCCCTT...TGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CCA 90 bp | ACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTAACACTTTGACTGCCTaGACGTTGACGAAGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: THSRAWIPASSQIAGLSPNTLTA*TLTKGT Trigger: AGTTCCCTTCGTCAACGTCCAGGCAGTCAAAGTGTT...AGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR TCA 90 bp | ATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTCCGGTGCTGAACTTCATCCAGAATGGAAGTaGTGGATGGGTCCTTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: MDPSIQPDSWLVSSGAELHPEWK*WMGPFH Trigger: ATGGAAAGGACCCATCCATCACTTCCATTCTGGATG...AAGTTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR TCA 90 bp | TGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCGCACGTCTTCAATCATaGTGGAATAGGCAATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: CNPLSSMDPSIQPDSWLVARLQS*WNRQFP Trigger: AGGGAATTGCCTATTCCATCATGATTGAAGACGTGC...GACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR GCA 90 bp | GCCGTAGCTTGTGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATATTGTCCAACAGGACCTaGACGTCTTCAATCATGATG | + |
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Preference number: 4 (lower is better) Translates to: AVACVTHSRAWIPASSQILSNRT*TSSIMM Trigger: CATCATGATTGAAGACGTGCAGGTCCTGTTGGACAA...TATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCTACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR GCA 90 bp | AGCTTGTGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGTGTCCATCATCCTTCTaGATACGACCAGAACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLCNPLSSMDPSIQPDSWCPSSF*IRPELF Trigger: GAAGAGTTCTGGTCGTATGCAGAAGGATGATGGACA...CCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR TCA 90 bp | CAGGAGGAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCATCCATCAGGGTTTGTaGCTGGCAGGAGGAAGATAT | + |
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Preference number: 4 (lower is better) Translates to: QEEDIQGIQNGSDGWVLSIHQGL*LAGGRY Trigger: ATATCTTCCTCCTGCCAGTCACAAACCCTGATGGAT...GGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR GCA 90 bp | GACTGGCAGGAGGAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGGTCATTTGCTGTCCAAAGTaGCGTAGCTTGTGTAACCCA | + |
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Preference number: 4 (lower is better) Translates to: DWQEEDIQGIQNGSDGWVICCPK*RSLCNP Trigger: TGGGTTACACAAGCTACGGCACTTTGGACAGCAAAT...GACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTCCTCCTGCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CCA 90 bp | AGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTCCGGTGCTGAAAGGTTATCCATTTCTTaGGAAATCTCTTCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SMDPSIQPDSWLVSSGAERLSIS*EISSRV Trigger: TACCCTGGAAGAGATTTCCCAAGAAATGGATAACCT...TTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR GCA 90 bp | GTCCAAAGTGCCGTAGCTTGTGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGAAACAATCTTATTTaGTGTCCAAAGTGCCGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VQSAVACVTHSRAWIPASRNNLI*CPKCRS Trigger: GCTACGGCACTTTGGACAGCAAATAAGATTGTTTCT...GGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR TCA 90 bp | AGAAACAATCTTATTTGCTGTCCAAAGTGCCGTAGCTTGTGTAACCCACTCTCGCCCTGGGGTGGTGGGTaGTTTCCAAAAATCAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RNNLICCPKCRSLCNPLSPWGGG*FPKIKL Trigger: CAGCTTGATTTTTGGAAATCACCCACCACCCCAGGG...CGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CCA 90 bp | AACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTTGTTCTTCATTGCTTaGTACAATCTCAAGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: NPLSSMDPSIQPDSWLVSLFFIA*YNLKNL Trigger: CAAGTTCTTGAGATTGTACCAAGCAATGAAGAACAA...GGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR TCA 90 bp | GAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCATAATCAGCTGGAGATGTTCTTaGGCCTCCAATTGTAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: EDIQGIQNGSDGWVLSIISWRCS*ASNCSR Trigger: TCTGCTACAATTGGAGGCTCAAGAACATCTCCAGCT...GATTATGGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| 3UTR CAA 72 bp | AGAAACAATCTTATTTGCTGTCCAAAGTGCCGTAGCTaGTGTAACCCACTCTCGAGCATGGATCCCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: RNNLICCPKCRS*CNPLSSMDPSI Trigger: GATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR GCA 90 bp | ACAATCTTATTTGCTGTCCAAAGTGCCGTAGCTTGTGTAACCCACTCTCGAGCACAGGGCGTTTGTCTTTaGGGTTTAGGGTTTAGTTGT | + |
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Preference number: 4 (lower is better) Translates to: TILFAVQSAVACVTHSRAQGVCL*GLGFSC Trigger: ACAACTAAACCCTAAACCGCAAAGACAAACGCCCTG...TGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CCA 90 bp | CAGGAGGAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCACAATCTCAAGAACTTaGTCTCCCACAAATGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QEEDIQGIQNGSDGWVLSTISRT*SPTNVS Trigger: AGAAACATTTGTGGGAGACCAAGTTCTTGAGATTGT...GGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTCCTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CCA 90 bp | AGAAACAATCTTATTTGCTGTCCAAAGTGCCGTAGCTTGTGTAACCCACTCTCGAATGGAAGTGATGGATaGGTCCTTTCCATAATCAGA | + |
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Preference number: 4 (lower is better) Translates to: RNNLICCPKCRSLCNPLSNGSDG*VLSIIR Trigger: TCTGATTATGGAAAGGACCCATCCATCACTTCCATT...CGAGAGTGGGTTACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR GCA 90 bp | CTTTCCATAATCAGAAACAATCTTATTTGCTGTCCAAAGTGCCGTAGCTTGTGTAGCCAATATTCACTTTaGTCACTAGACCAGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LSIIRNNLICCPKCRSLCSQYSL*SLDQGA Trigger: AGCACCCTGGTCTAGTGAGCAAAGTGAATATTGGCT...ACACAAGCTACGGCACTTTGGACAGCAAATAAGATTGTTTCTGATTATGGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS CCA 90 bp | TGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTaGCTTGTCTCCTCCGGTGCTGAACTTGAGCACGTTCATAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: CNPLSSMDPSIQPDS*LVSSGAELEHVHRP Trigger: CGGCCTATGAACGTGCTCAAGTTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222481.9 ENST00000487259.5 |
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| CDS-3UTR CAA 90 bp | AACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCCGACCAGAACTCTTCTaGAGCACGTTCATAGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: NPLSSMDPSIQPDSWLVSRPELF*STFIGR Trigger: CCGGCCTATGAACGTGCTCAAGAAGAGTTCTGGTCG...GGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS GCA 90 bp | CATGATGGAATAGGCAATTCCCTGGGACTCCAAGAACACTTTGACTaGCTGGACGTTGACGAAGGGAACTCGGACGTGGGCTGTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: HDGIGNSLGLQEHFD*LDVDEGNSDVGCLP Trigger: GGGGAGACAGCCCACGTCCGAGTTCCCTTCGTCAACGTCCAGGCAGTCAAAGTGTTCTTGGAGTCCCAGGGAATTGCCTATTCCATCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000222481.9 ENST00000416698.1 ENST00000480781.5 ENST00000487259.5 |
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| CDS-3UTR CAA 90 bp | AGCTTGTGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCCAAAGTGCCGTAGCTaGTGTAACCCACTCTCGAGC | + |
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Preference number: 5 (lower is better) Translates to: SLCNPLSSMDPSIQPDSWPKCRS*CNPLSS Trigger: GCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGG...CCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CAA 90 bp | CAGGAGGAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCTTGACTGCCTGGACGTaGACGAAGGGAACTCGGACG | + |
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Preference number: 5 (lower is better) Translates to: QEEDIQGIQNGSDGWVLSLTAWT*TKGTRT Trigger: CGTCCGAGTTCCCTTCGTCAACGTCCAGGCAGTCAA...GGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTCCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CAA 90 bp | ATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCTCCTCCGGTGCTGAACTTGACTCCAAGAACACTTaGACTGCCTGGACGTTGACG | + |
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Preference number: 5 (lower is better) Translates to: MDPSIQPDSWLVSSGAELDSKNT*TAWTLT Trigger: CGTCAACGTCCAGGCAGTCAAAGTGTTCTTGGAGTC...AAGTTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CAA 90 bp | GTCCAAAGTGCCGTAGCTTGTGTAACCCACTCTCGAGCATGGATCCCAGCATCCGAGCCAATATTCACTTaGCTCACTAGACCAGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: VQSAVACVTHSRAWIPASEPIFT*LTRPGC Trigger: GCACCCTGGTCTAGTGAGCAAAGTGAATATTGGCTC...GGATGCTGGGATCCATGCTCGAGAGTGGGTTACACAAGCTACGGCACTTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CAA 90 bp | TGTAACCCACTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTTGTCCTTCGTTCAGGGCGTTaGTCTTTGCGGTTTAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: CNPLSSMDPSIQPDSWLVLRSGR*SLRFRV Trigger: AACCCTAAACCGCAAAGACAAACGCCCTGAACGAAG...GACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAGTGGGTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS GCA 90 bp | TGGGAGGAGGGAGATTCTAGAAACATCGAGAGGAAGAACCGTCCCTaGACCGTGTACCTTGAGCACGTTCATAGGCCGGTTCTCAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: WEEGDSRNIERKNRP*TVYLEHVHRPVLKR Trigger: TCTTTTGAGAACCGGCCTATGAACGTGCTCAAGGTACACGGTGCAGGGACGGTTCTTCCTCTCGATGTTTCTAGAATCTCCCTCCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480781.5 |
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| CDS CCA 90 bp | ATTGGTCCCACTTTGTACTTGGTGCCATGCAGGCTTCTCAGAGATTaGGCAGCCTTTTGGGCCACTTCACTCAGCTCATCAAAGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: IGPTLYLVPCRLLRD*AAFWATSLSSSKSS Trigger: AGATGACTTTGATGAGCTGAGTGAAGTGGCCCAAAAGGCTGCCCAATCTCTGAGAAGCCTGCATGGCACCAAGTACAAAGTGGGACCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS-3UTR CAA 90 bp | CAGGAGGAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCATTTCTTCATTCTCTTaGTCCAACAGGACCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: QEEDIQGIQNGSDGWVLSISSFS*SNRTCT Trigger: CGTGCAGGTCCTGTTGGACAAAGAGAATGAAGAAAT...GGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTCCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS-3UTR CAA 90 bp | GGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCATAATCAGAAACAATCTTAGCCAGATAGCTGGCTaGTCTCCTCCGGTGCTGAAC | + |
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Preference number: 5 (lower is better) Translates to: GIQNGSDGWVLSIIRNNLSQIAG*SPPVLN Trigger: GTTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCT...AAGATTGTTTCTGATTATGGAAAGGACCCATCCATCACTTCCATTCTGGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS TCA 90 bp | AGGTCCTTGTTGAAGAAGGGAACAAAATCCAGGCTTACTTTGGTTTaGGAGAACACGTATCCATCAGGGTTTGTGACTGGCAGGAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RSLLKKGTKSRLTLV*ENTYPSGFVTGRRK Trigger: CTTCCTCCTGCCAGTCACAAACCCTGATGGATACGTGTTCTCTCAAACCAAAGTAAGCCTGGATTTTGTTCCCTTCTTCAACAAGGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487259.5 |
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| CDS-3UTR CAA 90 bp | CAGGAGGAAGATATCCAGGGCATCCAGAATGGAAGTGATGGATGGGTCCTTTCCTACAATCTCAAGAACTaGGTCTCCCACAAATGTTTC | + |
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Preference number: 5 (lower is better) Translates to: QEEDIQGIQNGSDGWVLSYNLKN*VSHKCF Trigger: GAAACATTTGTGGGAGACCAAGTTCTTGAGATTGTA...GGAAAGGACCCATCCATCACTTCCATTCTGGATGCCCTGGATATCTTCCTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS GCA 90 bp | ATCTATATCCTTTTTCAAAAGATCTTCGTTCAGGGCGTTTGTCTTTaGGGTTTAGGGTTTAGTTGTCCATCATCCTTCTGCATACGACCA | + |
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Preference number: 5 (lower is better) Translates to: IYILFQKIFVQGVCL*GLGFSCPSSFCIRP Trigger: TGGTCGTATGCAGAAGGATGATGGACAACTAAACCCTAAACCGCAAAGACAAACGCCCTGAACGAAGATCTTTTGAAAAAGGATATAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS CCA 72 bp | CCAGGTCTCCTCGGCTGTGGGCAGGATCTGACGGGCTaGCAAGAGGAAGCCGTAGCGCCCTGTGTCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PGLLGCGQDLTG*QEEAVAPCVSQ Trigger: CTGAGAGACACAGGGCGCTACGGCTTCCTCTTGCCAGCCCGTCAGATCCTGCCCACAGCCGAGGAGACCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS CCA 72 bp | TTGACTGCCTGGACGTTGACGAAGGGAACTCGGACGTaGGCTGTCTCCCCTGGGGTGGTGGGTGATTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LTAWTLTKGTRT*AVSPGVVGDFQ Trigger: TTGGAAATCACCCACCACCCCAGGGGAGACAGCCCACGTCCGAGTTCCCTTCGTCAACGTCCAGGCAGTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000222481.9 ENST00000416698.1 ENST00000480781.5 ENST00000487259.5 |
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| CDS CAA 72 bp | CCCTGGGACTCCAAGAACACTTTGACTGCCTGGACGTaGACGAAGGGAACTCGGACGTGGGCTGTCTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PWDSKNTLTAWT*TKGTRTWAVSP Trigger: AGGGGAGACAGCCCACGTCCGAGTTCCCTTCGTCAACGTCCAGGCAGTCAAAGTGTTCTTGGAGTCCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000222481.9 ENST00000416698.1 ENST00000480781.5 ENST00000487259.5 |
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| CDS GCA 72 bp | TGGCACTGGGTCCGTGGTATGAATCAGAGCAAGGGTTaGTGCTGGCTCCAGGTCCTCCAAAACCTGCATCCC | + |
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Preference number: 6 (lower is better) Translates to: WHWVRGMNQSKG*CWLQVLQNLHP Trigger: GGGATGCAGGTTTTGGAGGACCTGGAGCCAGCAGCAACCCTTGCTCTGATTCATACCACGGACCCAGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS CCA 72 bp | GCAATTCCCTGGGACTCCAAGAACACTTTGACTGCCTaGACGTTGACGAAGGGAACTCGGACGTGGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AIPWDSKNTLTA*TLTKGTRTWAV Trigger: GACAGCCCACGTCCGAGTTCCCTTCGTCAACGTCCAGGCAGTCAAAGTGTTCTTGGAGTCCCAGGGAATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000222481.9 ENST00000416698.1 ENST00000480781.5 ENST00000487259.5 |
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| CDS CCA 72 bp | CTCTCGAGCATGGATCCCAGCATCCAGCCAGATAGCTaGCTTGTCTCCTCCGGTGCTGAACTTGAGCACGTT | + |
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Preference number: 6 (lower is better) Translates to: LSSMDPSIQPDS*LVSSGAELEHV Trigger: AACGTGCTCAAGTTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222481.9 ENST00000487259.5 |
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| CDS GCA 72 bp | ATAGGCAATTCCCTGGGACTCCAAGAACACTTTGACTaGCTGGACGTTGACGAAGGGAACTCGGACGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: IGNSLGLQEHFD*LDVDEGNSDVG Trigger: GCCCACGTCCGAGTTCCCTTCGTCAACGTCCAGGCAGTCAAAGTGTTCTTGGAGTCCCAGGGAATTGCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000222481.9 ENST00000416698.1 ENST00000480781.5 ENST00000487259.5 |
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| CDS CAA 72 bp | CGAGCATGGATCCCAGCATCCAGCCAGATAGCTGGCTaGTCTCCTCCGGTGCTGAACTTGAGCACGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: RAWIPASSQIAG*SPPVLNLSTFI Trigger: TATGAACGTGCTCAAGTTCAGCACCGGAGGAGACAAGCCAGCTATCTGGCTGGATGCTGGGATCCATGCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000222481.9 ENST00000487259.5 |
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| CDS GCA 72 bp | GGAGATTCTAGAAACATCGAGAGGAAGAACCGTCCCTaGACCGTGTACCTTGAGCACGTTCATAGGCCGGTT | + |
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Preference number: 6 (lower is better) Translates to: GDSRNIERKNRP*TVYLEHVHRPV Trigger: AACCGGCCTATGAACGTGCTCAAGGTACACGGTGCAGGGACGGTTCTTCCTCTCGATGTTTCTAGAATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480781.5 |
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| CDS CCA 72 bp | GCTTCCTCCACTGGCTTGGTAGATGACAGAGCAGATTaGTCCCACTTTGTACTTGGTGCCATGCAGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASSTGLVDDRAD*SHFVLGAMQAS Trigger: AGAAGCCTGCATGGCACCAAGTACAAAGTGGGACCAATCTGCTCTGTCATCTACCAAGCCAGTGGAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS CAA 72 bp | CACTTTGTACTTGGTGCCATGCAGGCTTCTCAGAGATaGGGCAGCCTTTTGGGCCACTTCACTCAGCTCATC | + |
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Preference number: 6 (lower is better) Translates to: HFVLGAMQASQR*GSLLGHFTQLI Trigger: GATGAGCTGAGTGAAGTGGCCCAAAAGGCTGCCCAATCTCTGAGAAGCCTGCATGGCACCAAGTACAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS CAA 72 bp | ACATCGAGAGGAAGAACCGTCCCTGCACCGTGTACCTaGAGCACGTTCATAGGCCGGTTCTCAAAAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: TSRGRTVPAPCT*STFIGRFSKEE Trigger: CTCTTCTTTTGAGAACCGGCCTATGAACGTGCTCAAGGTACACGGTGCAGGGACGGTTCTTCCTCTCGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480781.5 |
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| CDS CAA 90 bp | GATTGGTCCCACTTTGTACTTGGTGCCATGCAGGCTTCTCAGAGATaGGGCAGCCTTTTGGGCCACTTCACTCAGCTCATCAAAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: DWSHFVLGAMQASQR*GSLLGHFTQLIKVI Trigger: GATGACTTTGATGAGCTGAGTGAAGTGGCCCAAAAGGCTGCCCAATCTCTGAGAAGCCTGCATGGCACCAAGTACAAAGTGGGACCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS CCA 72 bp | ACTTTGTACTTGGTGCCATGCAGGCTTCTCAGAGATTaGGCAGCCTTTTGGGCCACTTCACTCAGCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: TLYLVPCRLLRD*AAFWATSLSSS Trigger: TGATGAGCTGAGTGAAGTGGCCCAAAAGGCTGCCCAATCTCTGAGAAGCCTGCATGGCACCAAGTACAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS CAA 72 bp | TTAGGATCCACACCAACACAGAGGCTTCCAGATACCTaGGACCGGGTCTTCCGCCACATACGATTTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LGSTPTQRLPDT*DRVFRHIRFLV Trigger: AACCAAAAATCGTATGTGGCGGAAGACCCGGTCCAAGGTATCTGGAAGCCTCTGTGTTGGTGTGGATCCTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS CAA 90 bp | AGCACGTTCATAGGCCGGTTCTCAAAAGAAGAGCCAATATTCACTTaGCTCACTAGACCAGGGTGCTCAGCCACGAGGTTATCCATTTCT | + |
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Preference number: 6 (lower is better) Translates to: STFIGRFSKEEPIFT*LTRPGCSATRLSIS Trigger: AGAAATGGATAACCTCGTGGCTGAGCACCCTGGTCTAGTGAGCAAAGTGAATATTGGCTCTTCTTTTGAGAACCGGCCTATGAACGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000222481.9 ENST00000416698.1 ENST00000480781.5 ENST00000487259.5 |
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| CDS CAA 90 bp | ATTCTAGAAACATCGAGAGGAAGAACCGTCCCTGCACCGTGTACCTaGAGCACGTTCATAGGCCGGTTCTCAAAAGAAGAGCCAATATTC | + |
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Preference number: 6 (lower is better) Translates to: ILETSRGRTVPAPCT*STFIGRFSKEEPIF Trigger: GAATATTGGCTCTTCTTTTGAGAACCGGCCTATGAACGTGCTCAAGGTACACGGTGCAGGGACGGTTCTTCCTCTCGATGTTTCTAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480781.5 |
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| CDS TCA 72 bp | TCTCTTTGTCCAACAGGACCTGCACGTCTTCAATCATaGTGGAATAGGCAATTCCCTGGGACTCCAAGAACA | + |
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Preference number: 6 (lower is better) Translates to: SLCPTGPARLQS*WNRQFPGTPRT Trigger: TGTTCTTGGAGTCCCAGGGAATTGCCTATTCCATCATGATTGAAGACGTGCAGGTCCTGTTGGACAAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000222481.9 ENST00000416698.1 ENST00000480781.5 ENST00000487259.5 |
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| CDS CCA 72 bp | GGGCCACTTCACTCAGCTCATCAAAGTCATCTAACTTaGTACATTTGTACCCATAGGGGAACATCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GPLHSAHQSHLT*YICTHRGTSAA Trigger: AGCTGCTGATGTTCCCCTATGGGTACAAATGTACCAAGTTAGATGACTTTGATGAGCTGAGTGAAGTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000222481.9 |
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| CDS TCA 72 bp | TTGAAGAAGGGAACAAAATCCAGGCTTACTTTGGTTTaGGAGAACACGTATCCATCAGGGTTTGTGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: LKKGTKSRLTLV*ENTYPSGFVTG Trigger: GCCAGTCACAAACCCTGATGGATACGTGTTCTCTCAAACCAAAGTAAGCCTGGATTTTGTTCCCTTCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487259.5 |
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| CDS GCA 72 bp | CTTTGCGGTTTAGGGTTTAGTTGTCCATCATCCTTCTaGATACGACCAGAACTCTTCTTGAGCACGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LCGLGFSCPSSF*IRPELFLSTFI Trigger: TATGAACGTGCTCAAGAAGAGTTCTGGTCGTATGCAGAAGGATGATGGACAACTAAACCCTAAACCGCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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| CDS CAA 72 bp | GTTGAAGAAGGGAACAAAATCCAGGCTTACTTTGGTTaGAGAGAACACGTATCCATCAGGGTTTGTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: VEEGNKIQAYFG*REHVSIRVCDW Trigger: CCAGTCACAAACCCTGATGGATACGTGTTCTCTCAAACCAAAGTAAGCCTGGATTTTGTTCCCTTCTTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487259.5 |
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| CDS GCA 72 bp | CTTTTTCAAAAGATCTTCGTTCAGGGCGTTTGTCTTTaGGGTTTAGGGTTTAGTTGTCCATCATCCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LFQKIFVQGVCL*GLGFSCPSSFC Trigger: GCAGAAGGATGATGGACAACTAAACCCTAAACCGCAAAGACAAACGCCCTGAACGAAGATCTTTTGAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000416698.1 |
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