Pregenerated sensors for COX20 (Homo sapiens)
Ensembl gene IDs: ENSG00000203667Ensembl transcript IDs: ENST00000411948.7, ENST00000464757.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCTCTGCATCCTTCCTAGCGACAGCCACAAGAAAAGGTGGGCATaGGAGGGAAAATGCTCTTGTGAATTGAACTGGAGGCAAGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SLCILPSDSHKKRWA*EGKCSCELNWRQAP Trigger: TGGAGCTTGCCTCCAGTTCAATTCACAAGAGCATTTTCCCTCCCATGCCCACCTTTTCTTGTGGCTGTCGCTAGGAAGGATGCAGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR CCA 90 bp | CCACACAGCCTCTGCATCCTTCCTAGCGACAGCCACAAGAAAAGGTaGGCATGGGAGGGAAAATGCTCTTGTGAATTGAACTGGAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: PHSLCILPSDSHKKR*AWEGKCSCELNWRQ Trigger: TTGCCTCCAGTTCAATTCACAAGAGCATTTTCCCTCCCATGCCCACCTTTTCTTGTGGCTGTCGCTAGGAAGGATGCAGAGGCTGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR-3UTR TCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTTGGCCACAATCCTGTTaGCTGCTGTTACCTTCGCCC | + |
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Preference number: 2 (lower is better) Translates to: LDNVVHAALICATKSGQTWPQSC*LLLPSP Trigger: GGGCGAAGGTAACAGCAGTCAACAGGATTGTGGCCA...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR-3UTR TCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTCCCTCAACATGTGTTTaGCAGTTGTCATTCACTGCT | + |
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Preference number: 2 (lower is better) Translates to: LDNVVHAALICATKSGQTPSTCV*QLSFTA Trigger: AGCAGTGAATGACAACTGTCAAACACATGTTGAGGG...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR-3UTR GCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTCTTGCTCGATTTCTGTaGCTTCCATGGTACATCAAA | + |
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Preference number: 2 (lower is better) Translates to: LDNVVHAALICATKSGQTLARFL*LPWYIK Trigger: TTTGATGTACCATGGAAGGCACAGAAATCGAGCAAG...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR-3UTR CCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTTCTTGTGAATTGAACTaGAGGCAAGCTCCACTTTTC | + |
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Preference number: 2 (lower is better) Translates to: LDNVVHAALICATKSGQTSCELN*RQAPLF Trigger: GAAAAGTGGAGCTTGCCTCCAGTTCAATTCACAAGA...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR-3UTR TCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTATGGGAGCAGCTGATTaGCTTTCAAATGGATTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LDNVVHAALICATKSGQTMGAAD*LSNGLF Trigger: AAACAATCCATTTGAAAGTCAATCAGCTGCTCCCAT...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR CAA 90 bp | AACTATTTGGTTACGACTAATTTGGATAATGTAGTGCATGCAGCTTaGATTTGTGCCACTAAGAGTGGGCAAACTGTCTTCCTTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: NYLVTTNLDNVVHAA*ICATKSGQTVFLFV Trigger: CACAAAAAGGAAGACAGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAAATTAGTCGTAACCAAATAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR CAA 90 bp | ACTGAGCATAAGTGGCCTGTCCATATTTTGTTAAATATCAGATTATaGATTAGTGATCATCAACATTTTCCCGCATTCATGCAGTGCGGC | + |
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Preference number: 2 (lower is better) Translates to: TEHKWPVHILLNIRL*ISDHQHFPAFMQCG Trigger: GCCGCACTGCATGAATGCGGGAAAATGTTGATGATCACTAATCAATAATCTGATATTTAACAAAATATGGACAGGCCACTTATGCTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR-3UTR CCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTTTTCTGTGCCTTCCATaGTACATCAAAATAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: LDNVVHAALICATKSGQTFLCLP*YIKIIG Trigger: TCCTATTATTTTGATGTACCATGGAAGGCACAGAAA...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR CCA 72 bp | ATCCTTCCTAGCGACAGCCACAAGAAAAGGTGGGCATaGGAGGGAAAATGCTCTTGTGAATTGAACTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: ILPSDSHKKRWA*EGKCSCELNWR Trigger: CCTCCAGTTCAATTCACAAGAGCATTTTCCCTCCCATGCCCACCTTTTCTTGTGGCTGTCGCTAGGAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR CCA 72 bp | CTCTGCATCCTTCCTAGCGACAGCCACAAGAAAAGGTaGGCATGGGAGGGAAAATGCTCTTGTGAATTGAAC | + |
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Preference number: 3 (lower is better) Translates to: LCILPSDSHKKR*AWEGKCSCELN Trigger: GTTCAATTCACAAGAGCATTTTCCCTCCCATGCCCACCTTTTCTTGTGGCTGTCGCTAGGAAGGATGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR-3UTR CAA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTGCAGTTGTTTTACTATaGCATCAGTCTGCCAGACAA | + |
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Preference number: 3 (lower is better) Translates to: LDNVVHAALICATKSGQTAVVLL*HQSARQ Trigger: TTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR CCA 72 bp | ATATGGAAATATGAGGGTATTTTATTTAAAGGGACTTaGGCCTGTGGATACCAAGGAATAACTAAGGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: IWKYEGILFKGT*ACGYQGITKVK Trigger: TTTTACCTTAGTTATTCCTTGGTATCCACAGGCCCAAGTCCCTTTAAATAAAATACCCTCATATTTCCATAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR TCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTACTCCTAACCTCAGGTaGTCCAACTGCCTCGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LDNVVHAALICATKSGQTTPNLR*SNCLGL Trigger: GAGGCCGAGGCAGTTGGATCACCTGAGGTTAGGAGT...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR TCA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTTGGCCACAATCCTGTTaGCTGCTGTTACCTTCGCCC | + |
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Preference number: 4 (lower is better) Translates to: AVVLLLHQSARQVPCAYFWPQSC*LLLPSP Trigger: GGGCGAAGGTAACAGCAGTCAACAGGATTGTGGCCA...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR CCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTAGCCACAAGAAAAGGTaGGCATGGGAGGGAAAATGC | + |
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Preference number: 4 (lower is better) Translates to: LDNVVHAALICATKSGQTSHKKR*AWEGKC Trigger: GCATTTTCCCTCCCATGCCCACCTTTTCTTGTGGCT...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR GCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTCACAATCCTGTTGACTaGTGTTACCTTCGCCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LDNVVHAALICATKSGQTHNPVD*CYLRPN Trigger: ATTGGGGCGAAGGTAACAGCAGTCAACAGGATTGTG...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR GCA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTAAACCACACAGCCTCTaGATCCTTCCTAGCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: AVVLLLHQSARQVPCAYFKPHSL*ILPSDS Trigger: GCTGTCGCTAGGAAGGATGCAGAGGCTGTGTGGTTT...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR GCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTACTATTGCATCAGTCTaGCAGACAAGTTCCATGTGC | + |
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Preference number: 4 (lower is better) Translates to: LDNVVHAALICATKSGQTTIASV*QTSSMC Trigger: GCACATGGAACTTGTCTGGCAGACTGATGCAATAGT...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR GCA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTGCATGGGAGGGAAAATaGTCTTGTGAATTGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: LDNVVHAALICATKSGQTAWEGK*SCELNW Trigger: CCAGTTCAATTCACAAGAGCATTTTCCCTCCCATGC...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR TCA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTGGGAAAATGCTCTTGTaGATTGAACTGGAGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: AVVLLLHQSARQVPCAYFGKMLL*IELEAS Trigger: GCTTGCCTCCAGTTCAATTCACAAGAGCATTTTCCC...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR GCA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTATTTTCCCGCATTCATaGAGTGCGGCCTCTGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: AVVLLLHQSARQVPCAYFIFPHS*SAASEN Trigger: GTTTTCAGAGGCCGCACTGCATGAATGCGGGAAAAT...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| 3UTR CAA 72 bp | GTTACGACTAATTTGGATAATGTAGTGCATGCAGCTTaGATTTGTGCCACTAAGAGTGGGCAAACTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VTTNLDNVVHAA*ICATKSGQTVF Trigger: GAAGACAGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAAATTAGTCGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR CCA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTTTTCTGTGCCTTCCATaGTACATCAAAATAATAGGA | + |
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Preference number: 4 (lower is better) Translates to: AVVLLLHQSARQVPCAYFFLCLP*YIKIIG Trigger: TCCTATTATTTTGATGTACCATGGAAGGCACAGAAA...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR CCA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTAAAACTGAGCATAAGTaGCCTGTCCATATTTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: AVVLLLHQSARQVPCAYFKTEHK*PVHILL Trigger: TAACAAAATATGGACAGGCCACTTATGCTCAGTTTT...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS TCA 90 bp | TTTCCCCAAGGATGGGATGCTGGGGCCAGAGGATTAGTACCAGTTTaGTCTAGTCTTAGGTGCAAAGATGCAAGTGTGAGACCAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: FPQGWDAGARGLVPV*SSLRCKDASVRPAC Trigger: ACAAGCTGGTCTCACACTTGCATCTTTGCACCTAAGACTAGATCAAACTGGTACTAATCCTCTGGCCCCAGCATCCCATCCTTGGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS-3UTR CAA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTATGGCCACAATCCTGTaGACTGCTGTTACCTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: AVVLLLHQSARQVPCAYFMATIL*TAVTFA Trigger: GGCGAAGGTAACAGCAGTCAACAGGATTGTGGCCAT...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR CAA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTGTAGTGCATGCAGCTTaGATTTGTGCCACTAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: LDNVVHAALICATKSGQTVVHAA*ICATKS Trigger: ACTCTTAGTGGCACAAATCAAAGCTGCATGCACTAC...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS TCA 90 bp | CCTAAATCAGCTTGCGTTGTCTTTGTCCACCTTTGGTATGCAGTCTaGATCTTTAAATCCGAAAACCTTACAAATTGGACCGGAAAACCC | + |
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Preference number: 5 (lower is better) Translates to: PKSACVVFVHLWYAV*IFKSENLTNWTGKP Trigger: GGGTTTTCCGGTCCAATTTGTAAGGTTTTCGGATTTAAAGATTCAGACTGCATACCAAAGGTGGACAAAGACAACGCAAGCTGATTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CCA 90 bp | TTGCTTCAAAGCTTTGCAGTACAGTTCTTCACATTACCAAGAGGTTaGGGGATTTCATTTAGCAAGACGACTTTTTCCTATCAGCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LLQSFAVQFFTLPRG*GISFSKTTFSYQLE Trigger: CTCAAGCTGATAGGAAAAAGTCGTCTTGCTAAATGAAATCCCCCAACCTCTTGGTAATGTGAAGAACTGTACTGCAAAGCTTTGAAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS-3UTR CAA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTCTAATATTTTCTTCCTaGCTCGATTTCTGTGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: LDNVVHAALICATKSGQTLIFSS*LDFCAF Trigger: GAAGGCACAGAAATCGAGCAAGGAAGAAAATATTAG...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR CAA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTAAATGCTCTTGTGAATaGAACTGGAGGCAAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: AVVLLLHQSARQVPCAYFKCSCE*NWRQAP Trigger: TGGAGCTTGCCTCCAGTTCAATTCACAAGAGCATTT...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR CAA 90 bp | GCAGTTGTTTTACTATTGCATCAGTCTGCCAGACAAGTTCCATGTGCATATTTTTCCCTCAACATGTGTTaGACAGTTGTCATTCACTGC | + |
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Preference number: 5 (lower is better) Translates to: AVVLLLHQSARQVPCAYFSLNMC*TVVIHC Trigger: GCAGTGAATGACAACTGTCAAACACATGTTGAGGGA...AAAATATGCACATGGAACTTGTCTGGCAGACTGATGCAATAGTAAAACAACTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR CAA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTTTGGTTACGACTAATTaGGATAATGTAGTGCATGCA | + |
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Preference number: 5 (lower is better) Translates to: LDNVVHAALICATKSGQTLVTTN*DNVVHA Trigger: TGCATGCACTACATTATCCAAATTAGTCGTAACCAA...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS-3UTR CAA 90 bp | TTGGATAATGTAGTGCATGCAGCTTTGATTTGTGCCACTAAGAGTGGGCAAACTCCTCTGAAAACATGGTaGAACATCCTATGGAATTTT | + |
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Preference number: 5 (lower is better) Translates to: LDNVVHAALICATKSGQTPLKTW*NILWNF Trigger: AAAATTCCATAGGATGTTCAACCATGTTTTCAGAGG...AGTTTGCCCACTCTTAGTGGCACAAATCAAAGCTGCATGCACTACATTATCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411948.7 |
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| CDS GCA 90 bp | TTATTTGGGAATATGCCTATCATTGGAATTGAAAGCAGCATAGCTTaGTTCAGTAACTCCAATAATTTGGGAAGCAGAAATGGAAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: LFGNMPIIGIESSIA*FSNSNNLGSRNGKS Trigger: ACTTTTTCCATTTCTGCTTCCCAAATTATTGGAGTTACTGAAGCAAGCTATGCTGCTTTCAATTCCAATGATAGGCATATTCCCAAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CCA 90 bp | AGTCTTCATTGGATTTATGTATTTCTTATTCCTAATATGTTTAACTaGGATGTCTGTCACTCTAGGGCGGCAAGACAGACATTTAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: SLHWIYVFLIPNMFN*DVCHSRAARQTFKS Trigger: ACTTTTAAATGTCTGTCTTGCCGCCCTAGAGTGACAGACATCCCAGTTAAACATATTAGGAATAAGAAATACATAAATCCAATGAAGACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS TCA 72 bp | AGGGGACATATGATCATGTGGGTAGTGTTATGCAGGTaGGGAATGCTGGACTTAGCGCTCCAGTCCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: RGHMIMWVVLCR*GMLDLALQSRT Trigger: AGTCCTGGACTGGAGCGCTAAGTCCAGCATTCCTCACCTGCATAACACTACCCACATGATCATATGTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CAA 90 bp | TTCCCTCTGTCTGGCCCCGTTCCCACCCGCATGCCTAACATAGGATaGCTTCAAAGCTTTGCAGTACAGTTCTTCACATTACCAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: FPLSGPVPTRMPNIG*LQSFAVQFFTLPRG Trigger: ACCTCTTGGTAATGTGAAGAACTGTACTGCAAAGCTTTGAAGCAATCCTATGTTAGGCATGCGGGTGGGAACGGGGCCAGACAGAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS TCA 72 bp | GGATGGGATGCTGGGGCCAGAGGATTAGTACCAGTTTaGTCTAGTCTTAGGTGCAAAGATGCAAGTGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GWDAGARGLVPV*SSLRCKDASVR Trigger: TCTCACACTTGCATCTTTGCACCTAAGACTAGATCAAACTGGTACTAATCCTCTGGCCCCAGCATCCCATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CAA 72 bp | TCTGGCCCCGTTCCCACCCGCATGCCTAACATAGGATaGCTTCAAAGCTTTGCAGTACAGTTCTTCACATTA | + |
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Preference number: 6 (lower is better) Translates to: SGPVPTRMPNIG*LQSFAVQFFTL Trigger: TAATGTGAAGAACTGTACTGCAAAGCTTTGAAGCAATCCTATGTTAGGCATGCGGGTGGGAACGGGGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CAA 72 bp | GAGTATGTGCCACGTGACAACCTAAATCAGCTTGCGTaGTCTTTGTCCACCTTTGGTATGCAGTCTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: EYVPRDNLNQLA*SLSTFGMQSES Trigger: AGATTCAGACTGCATACCAAAGGTGGACAAAGACAACGCAAGCTGATTTAGGTTGTCACGTGGCACATACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CAA 72 bp | GGATTTCATTTAGCAAGACGACTTTTTCCTATCAGCTaGAGAGCCCAGGGGACATATGATCATGTGGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: GFHLARRLFPIS*RAQGTYDHVGS Trigger: ACTACCCACATGATCATATGTCCCCTGGGCTCTCAAGCTGATAGGAAAAAGTCGTCTTGCTAAATGAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CAA 90 bp | CTAGAGTATGTGCCACGTGACAACCTAAATCAGCTTGCGTTGTCTTaGTCCACCTTTGGTATGCAGTCTGAATCTTTAAATCCGAAAACC | + |
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Preference number: 6 (lower is better) Translates to: LEYVPRDNLNQLALS*STFGMQSESLNPKT Trigger: GGTTTTCGGATTTAAAGATTCAGACTGCATACCAAAGGTGGACAAAGACAACGCAAGCTGATTTAGGTTGTCACGTGGCACATACTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CAA 72 bp | GTGCCACGTGACAACCTAAATCAGCTTGCGTTGTCTTaGTCCACCTTTGGTATGCAGTCTGAATCTTTAAAT | + |
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Preference number: 6 (lower is better) Translates to: VPRDNLNQLALS*STFGMQSESLN Trigger: ATTTAAAGATTCAGACTGCATACCAAAGGTGGACAAAGACAACGCAAGCTGATTTAGGTTGTCACGTGGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS TCA 72 bp | GCTTGCGTTGTCTTTGTCCACCTTTGGTATGCAGTCTaGATCTTTAAATCCGAAAACCTTACAAATTGGACC | + |
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Preference number: 6 (lower is better) Translates to: ACVVFVHLWYAV*IFKSENLTNWT Trigger: GGTCCAATTTGTAAGGTTTTCGGATTTAAAGATTCAGACTGCATACCAAAGGTGGACAAAGACAACGCAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CAA 90 bp | TTTAAACTAGAGTATGTGCCACGTGACAACCTAAATCAGCTTGCGTaGTCTTTGTCCACCTTTGGTATGCAGTCTGAATCTTTAAATCCG | + |
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Preference number: 6 (lower is better) Translates to: FKLEYVPRDNLNQLA*SLSTFGMQSESLNP Trigger: CGGATTTAAAGATTCAGACTGCATACCAAAGGTGGACAAAGACAACGCAAGCTGATTTAGGTTGTCACGTGGCACATACTCTAGTTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS TCA 72 bp | CAGTTTGATCTAGTCTTAGGTGCAAAGATGCAAGTGTaGGACCAGCTTGTACCACAGGATAGAATTAAGTAT | + |
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Preference number: 6 (lower is better) Translates to: QFDLVLGAKMQV*DQLVPQDRIKY Trigger: ATACTTAATTCTATCCTGTGGTACAAGCTGGTCTCACACTTGCATCTTTGCACCTAAGACTAGATCAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CCA 72 bp | AGCTTTGCAGTACAGTTCTTCACATTACCAAGAGGTTaGGGGATTTCATTTAGCAAGACGACTTTTTCCTAT | + |
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Preference number: 6 (lower is better) Translates to: SFAVQFFTLPRG*GISFSKTTFSY Trigger: ATAGGAAAAAGTCGTCTTGCTAAATGAAATCCCCCAACCTCTTGGTAATGTGAAGAACTGTACTGCAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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| CDS CAA 72 bp | CTAGTCTGTTTTCTTGCCTGTGAAGTGAGGCTGCACTaGATTATATTTGATTCTTTGTTCGTAATACATGGG | + |
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Preference number: 6 (lower is better) Translates to: LVCFLACEVRLH*IIFDSLFVIHG Trigger: CCCATGTATTACGAACAAAGAATCAAATATAATCAAGTGCAGCCTCACTTCACAGGCAAGAAAACAGACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464757.1 |
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