RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COX18 (Homo sapiens)

Ensembl gene IDs: ENSG00000163626

Ensembl transcript IDs: ENST00000295890.8, ENST00000421792.2, ENST00000449739.6, ENST00000507544.3, ENST00000510031.1

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAGGCTGATCTGGAACTCCTGGCCACAAGGATCTGCCCTATCCTaGAACTTTCTAGGGGCCCCCAGCCACCAGTCATCACATGAGCAT +
Preference number: 1 (lower is better)
Translates to: PRLIWNSWPQGSALS*NFLGAPSHQSSHEH
Trigger: ATGCTCATGTGATGACTGGTGGCTGGGGGCCCCTAGAAAGTTTCAGGATAGGGCAGATCCTTGTGGCCAGGAGTTCCAGATCAGCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR CCA 90 bp ATCCAGGAGAACGCAGCAGCAAATTCTGTGAAAGGCCCACGAAGCTaGAGCATAACCAGTAGAGAACAATTGATGAGGGTACCGTTGCAG +
Preference number: 1 (lower is better)
Translates to: IQENAAANSVKGPRS*SITSREQLMRVPLQ
Trigger: CTGCAACGGTACCCTCATCAATTGTTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTTCACAGAATTTGCTGCTGCGTTCTCCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR TCA 90 bp CTGAATGTGCTGCCCCCGTGCTTAAATTCCGGAGAGCAAAAGACATaGAGATCCACATTGGAAGCTGAATCCAAACCAACACAGTGGCTT +
Preference number: 1 (lower is better)
Translates to: LNVLPPCLNSGEQKT*RSTLEAESKPTQWL
Trigger: AAGCCACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTCCGGAATTTAAGCACGGGGGCAGCACATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR CCA 90 bp GTCCATTTTCAAGGCATGATAAATCTAAGCACTGGCAGCCAGCCTTaGTATGTAACAAACCGCACTGCTCATGCACCTAGAAGGTCACAA +
Preference number: 1 (lower is better)
Translates to: VHFQGMINLSTGSQP*YVTNRTAHAPRRSQ
Trigger: TTGTGACCTTCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCTTAGATTTATCATGCCTTGAAAATGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR TCA 90 bp CTTAAATTCCGGAGAGCAAAAGACATGAAGATCCACATTGGAAGCTaGATCCAAACCAACACAGTGGCTTTGAAAGGGTGGCAGTTATCT +
Preference number: 1 (lower is better)
Translates to: LKFRRAKDMKIHIGS*IQTNTVALKGWQLS
Trigger: AGATAACTGCCACCCTTTCAAAGCCACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTCCGGAATTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR CCA 90 bp AACATTTTAAATGGTCCATTTTCAAGGCATGATAAATCTAAGCACTaGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACC +
Preference number: 1 (lower is better)
Translates to: NILNGPFSRHDKSKH*QPALVCNKPHCSCT
Trigger: GGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCTTAGATTTATCATGCCTTGAAAATGGACCATTTAAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR TCA 90 bp GAAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTaGCTCACATTTTTGCCTACAAATGGCTCAAAAGCACTTGTGCAA +
Preference number: 1 (lower is better)
Translates to: ETRRQSTICFTSVGR*LTFLPTNGSKALVQ
Trigger: TTGCACAAGTGCTTTTGAGCCATTTGTAGGCAAAAATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR TCA 90 bp TCTGTAGCCCTGACTTCATTCAGGTTCTGGAACTGCTCCAGGCTATaGCAAACTGTTAGAAATAAGACCACAGACTTGCAATTTTCTGAA +
Preference number: 1 (lower is better)
Translates to: SVALTSFRFWNCSRL*QTVRNKTTDLQFSE
Trigger: TTCAGAAAATTGCAAGTCTGTGGTCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAGTCAGGGCTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR TCA 90 bp TATACTTTTGAACTCAGGTATCCTAATGGTATAAATACTATAAATTaGTCCAGGAGTGAGTCTCCCTTCCTGACTCTTGAAATGAGAAGC +
Preference number: 1 (lower is better)
Translates to: YTFELRYPNGINTIN*SRSESPFLTLEMRS
Trigger: GCTTCTCATTTCAAGAGTCAGGAAGGGAGACTCACTCCTGGATCAATTTATAGTATTTATACCATTAGGATACCTGAGTTCAAAAGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTAACCTTCCTGAACTCTaGAGGGCCCAGCGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSNLPEL*RAQRRA
Trigger: GGCTCTGCGCTGGGCCCTGCAGAGTTCAGGAAGGTT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTAGATGGAGGTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTRWRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAACCTCCATCT...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR GCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGTTGTCCAGGCTGGAGTaGAATGGGGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGLSRLE*NGVISA
Trigger: AGCTGAGATCACCCCATTGCACTCCAGCCTGGACAA...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTTGGAGTGCAATGGGGTaGTCTCAGCTCACTGAAACC +
Preference number: 2 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTWSAMG*SQLTET
Trigger: GGTTTCAGTGAGCTGAGATCACCCCATTGCACTCCA...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR TCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGCAGATACTTGGAGGCTaGGGCAGGAAAATCACTGGA +
Preference number: 2 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGQILGG*GRKITG
Trigger: TCCAGTGATTTTCCTGCCTCAGCCTCCAAGTATCTG...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGACTTTGCACCTTCTCCTaGGTTATCTGTCAGGGTGGC +
Preference number: 2 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRLCTFS*VICQGG
Trigger: GCCACCCTGACAGATAACCCAGGAGAAGGTGCAAAG...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGATTTTTGTATTCTTTCTaGGCAGGGCCGGGAGGCAAC +
Preference number: 2 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRFLYSF*AGPGGN
Trigger: GTTGCCTCCCGGCCCTGCTCAGAAAGAATACAAAAA...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGGCAATCCCAGATACTTaGAGGCTGAGGCAGGAAAAT +
Preference number: 2 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGAIPDT*RLRQEN
Trigger: ATTTTCCTGCCTCAGCCTCCAAGTATCTGGGATTGC...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTGGGTAACACCCCTGTaGGGAAGGGTAACACAAACA +
Preference number: 2 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSWVTPL*GRVTQT
Trigger: TGTTTGTGTTACCCTTCCCCACAGGGGTGTTACCCA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTGTGATCTCAGCTCACTaGAACCTCTGTATTCCAGGT +
Preference number: 2 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSVISAH*NLCIPG
Trigger: ACCTGGAATACAGAGGTTTCAGTGAGCTGAGATCAC...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAGTGATCTCAGCTCACTaGAACCTCTGTATTCCAGGT +
Preference number: 2 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRVISAH*NLCIPG
Trigger: ACCTGGAATACAGAGGTTTCAGTGAGCTGAGATCAC...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGTTTTTGTATTCTTTCTaGGCAGGGCCGGGAGGCAAC +
Preference number: 2 (lower is better)
Translates to: LSEQGREATSSTMLGTCMFLYSF*AGPGGN
Trigger: GTTGCCTCCCGGCCCTGCTCAGAAAGAATACAAAAA...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR TCA 90 bp GTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTGGAGTCGGGTGCAGTaGGGTCAGGAAACCACAGAA +
Preference number: 2 (lower is better)
Translates to: VPLQQLVSSTPTLHGQSTWSRVQ*GQETTE
Trigger: TTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCA...CGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR GCA 90 bp TTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTGTCCAGGCTGGAGTaGAATGGGGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: LVDGIRQSWRNPGERSSKLSRLE*NGVISA
Trigger: AGCTGAGATCACCCCATTGCACTCCAGCCTGGACAA...TTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449739.6
3UTR-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGCTGGTTCTGGGGTTATaGATAGATTTGAGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGLVLGL*IDLSKE
Trigger: CTCCTTGCTCAAATCTATCCATAACCCCAGAACCAG...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAATCCACATTGGAAGCTaGATCCAAACCAACACAGTG +
Preference number: 2 (lower is better)
Translates to: EQGREATSSTMLGTCMHGIHIGS*IQTNTV
Trigger: CACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGAT...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449739.6
3UTR-3UTR TCA 90 bp CAATTGATGAGGGTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACTGGAGTCGGGTGCAGTaGGGTCAGGAAACCACAGAA +
Preference number: 2 (lower is better)
Translates to: QLMRVPLQQLVSSTPTLHWSRVQ*GQETTE
Trigger: TTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCA...GTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTACCCTCATCAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR GCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTGCACACACATTTCTaGCTCTGCATCCTTGATTGT +
Preference number: 2 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSLHTHF*LCILDC
Trigger: ACAATCAAGGATGCAGAGGCAGAAATGTGTGTGCAG...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGTACTATGACCTAAGCTaGACACACATTTCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGYYDLS*THISAS
Trigger: AGAGGCAGAAATGTGTGTGCAGCTTAGGTCATAGTA...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp AAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCAGTGAATGTGCTGCCCCCGTaGTTAAATTCCGGAGAGCAA +
Preference number: 2 (lower is better)
Translates to: KLMTPTEIGRIQVESGAVNVLPP*LNSGEQ
Trigger: TTGCTCTCCGGAATTTAAGCACGGGGGCAGCACATT...CACTGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR CCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGGCAATCCCAGATACTTaGAGGCTGAGGCAGGAAAAT +
Preference number: 2 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLAIPDT*RLRQEN
Trigger: ATTTTCCTGCCTCAGCCTCCAAGTATCTGGGATTGC...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp TTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAAGCCTGGCATCTCTTTTaGACCACCCCAACTGATTTG +
Preference number: 2 (lower is better)
Translates to: LVDGIRQSWRNPGERSSKAWHLF*TTPTDL
Trigger: CAAATCAGTTGGGGTGGTCCAAAAGAGATGCCAGGC...TTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR-3UTR CCA 90 bp TTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCAGTGAGGGTGGCTTTGAAAGGGTaGCAGTTATCTCGCACATAT +
Preference number: 2 (lower is better)
Translates to: LMTPTEIGRIQVESGAVRVALKG*QLSRTY
Trigger: ATATGTGCGAGATAACTGCCACCCTTTCAAAGCCAC...CCTCACTGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCCACCAGTCATCACATaGGCATACAAAAGACACTTA +
Preference number: 2 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSPPVIT*AYKRHL
Trigger: TAAGTGTCTTTTGTATGCTCATGTGATGACTGGTGG...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGGCTGTTAAAGGTACCTaGAAAGTCTTCTCCCCAAGT +
Preference number: 2 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLAVKGT*KVFSPS
Trigger: ACTTGGGGAGAAGACTTTTCAGGTACCTTTAACAGC...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp GTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGAACAGAAAAACCTTCTaGATGTGCTGCCCCCGTGCT +
Preference number: 2 (lower is better)
Translates to: VPLQQLVSSTPTLHGQSTNRKTF*MCCPRA
Trigger: AGCACGGGGGCAGCACATTCAGAAGGTTTTTCTGTT...CGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR GCA 90 bp GGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTGAAAATGTGCTGCCCCCGTaGTTAAATTCCGGAGAGCAA +
Preference number: 2 (lower is better)
Translates to: GIRQSWRNPGERSSKFCENVLPP*LNSGEQ
Trigger: TTGCTCTCCGGAATTTAAGCACGGGGGCAGCACATT...TTCACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR CCA 90 bp TTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAAAAAGGCCCACGAAGCTaGAGCATAACCAGTAGAGAA +
Preference number: 2 (lower is better)
Translates to: LVDGIRQSWRNPGERSSKKGPRS*SITSRE
Trigger: TTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTT...TTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR TCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATAGATGGAGGTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 2 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHRWRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAACCTCCATCT...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp TTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAAATCCACATTGGAAGCTaGATCCAAACCAACACAGTG +
Preference number: 2 (lower is better)
Translates to: LVDGIRQSWRNPGERSSKIHIGS*IQTNTV
Trigger: CACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGAT...TTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR TCA 90 bp TCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAATTGGACCACCCCAACTaGTTTGCACGAACTGCAACT +
Preference number: 2 (lower is better)
Translates to: SESDLVDGIRQSWRNPGELDHPN*FARTAT
Trigger: AGTTGCAGTTCGTGCAAATCAGTTGGGGTGGTCCAA...TTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR-3UTR TCA 90 bp CAATTGATGAGGGTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACCCAACACAGTGGCTTTaGAAGGGTGGCAGTTATCTC +
Preference number: 2 (lower is better)
Translates to: QLMRVPLQQLVSSTPTLHPTQWL*KGGSYL
Trigger: GAGATAACTGCCACCCTTTCAAAGCCACTGTGTTGG...GTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTACCCTCATCAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR-3UTR GCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGACCTCAATAGGCAACTaGCCTTCTGGTTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: LSEQGREATSSTMLGTCMTSIGN*PSGFLL
Trigger: AAGAAGAAAACCAGAAGGGCAGTTGCCTATTGAGGT...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR GCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGACCTCAATAGGCAACTaGCCTTCTGGTTTTCTTCTT +
Preference number: 2 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLTSIGN*PSGFLL
Trigger: AAGAAGAAAACCAGAAGGGCAGTTGCCTATTGAGGT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp GTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGCCACCCCAACTGATTTaGACGAACTGCAACTTCTTG +
Preference number: 2 (lower is better)
Translates to: VPLQQLVSSTPTLHGQSTPPQLI*TNCNFL
Trigger: CAAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGG...CGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGAGGGACTTGTATGCATaGACTACTTTACTGCATATA +
Preference number: 2 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGRDLYA*TTLLHI
Trigger: TATATGCAGTAAAGTAGTCCATGCATACAAGTCCCT...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGGGACGGGTAAATGGGTaGTTCTTAGATGAAGATATG +
Preference number: 2 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLGRVNG*FLDEDM
Trigger: CATATCTTCATCTAAGAACCACCCATTTACCCGTCC...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp GTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGAAAGGCCCACGAAGCTaGAGCATAACCAGTAGAGAA +
Preference number: 2 (lower is better)
Translates to: VPLQQLVSSTPTLHGQSTKGPRS*SITSRE
Trigger: TTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTT...CGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR TCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGTTCCTCTTTTTACTATaGCCTAAGCTGCACACACAT +
Preference number: 2 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLFLFLL*PKLHTH
Trigger: ATGTGTGTGCAGCTTAGGTCATAGTAAAAAGAGGAA...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGTCCCTTCCTGACTCTTaGAATGAGAAGCATTCATTA +
Preference number: 2 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLSLPDS*NEKHSL
Trigger: TAATGAATGCTTCTCATTTCAAGAGTCAGGAAGGGA...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp AACAAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCAGGAGAGCAAAAGACATaGAGATCCACATTGGAAGCT +
Preference number: 2 (lower is better)
Translates to: NKLMTPTEIGRIQVESGAGEQKT*RSTLEA
Trigger: AGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTCC...TGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAATTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATTTGTCCAGGCTGGAGTaGAATGGGGTGATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHLSRLE*NGVISA
Trigger: AGCTGAGATCACCCCATTGCACTCCAGCCTGGACAA...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR GCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCATGGACTACTTTACTaGATATATTTCAAGTTGCCC +
Preference number: 2 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSHGLLY*IYFKLP
Trigger: GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATG...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAACAGGGTTAGGTTTCTaGAAGCTTTGTTTTTGTCAA +
Preference number: 2 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRTGLGF*KLCFCQ
Trigger: TTGACAAAAACAAAGCTTGCAGAAACCTAACCCTGT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTCAGAGACAGGCACTTTaGTTCTATTCTAATACTTTC +
Preference number: 2 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTQRQAL*FYSNTF
Trigger: GAAAGTATTAGAATAGAACCAAAGTGCCTGTCTCTG...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR CCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGAGGCAACTGCCCTTCTaGTTTTCTTCTTTGACTAAA +
Preference number: 2 (lower is better)
Translates to: LSEQGREATSSTMLGTCMRQLPF*FSSLTK
Trigger: TTTAGTCAAAGAAGAAAACCAGAAGGGCAGTTGCCT...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR CCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGTCAATTCCTTCAATGTaGTTGGAAAGCACAATTGCC +
Preference number: 2 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLSIPSM*LESTIA
Trigger: GGCAATTGTGCTTTCCAACCACATTGAAGGAATTGA...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR TCA 90 bp GCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATATACGTCAACAGAAAAACCTTCTaGATGTGCTGCCCCCGTGCT +
Preference number: 2 (lower is better)
Translates to: AIGIINTDIARTKYVIYVNRKTF*MCCPRA
Trigger: AGCACGGGGGCAGCACATTCAGAAGGTTTTTCTGTT...GACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR GCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGATTGTACACGCTaGAAATATAGTCAATTTGCA +
Preference number: 2 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSLDCTR*KYSQFA
Trigger: TGCAAATTGACTATATTTGCAGCGTGTACAATCAAG...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp ATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTGCATCAACACCGACATTaGACGGACAAAGTACGTAAT +
Preference number: 2 (lower is better)
Translates to: MVFGKVGEIQENAAANSVHQHRH*TDKVRN
Trigger: ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATG...CACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR CCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGAGGGACTTGTATGCATaGACTACTTTACTGCATATA +
Preference number: 2 (lower is better)
Translates to: LSEQGREATSSTMLGTCMRDLYA*TTLLHI
Trigger: TATATGCAGTAAAGTAGTCCATGCATACAAGTCCCT...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR CCA 90 bp GGGTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTATACCGTTGCAGCAATTaGTATCATCAACACCGACAT +
Preference number: 2 (lower is better)
Translates to: GYRCSNWYHQHRHCTDKVYRCSN*YHQHRH
Trigger: ATGTCGGTGTTGATGATACCAATTGCTGCAACGGTA...TACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR TCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATGTGATCTCAGCTCACTaGAACCTCTGTATTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHVISAH*NLCIPG
Trigger: ACCTGGAATACAGAGGTTTCAGTGAGCTGAGATCAC...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR TCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCTGGAGTGCAATGGGGTaGTCTCAGCTCACTGAAACC +
Preference number: 2 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPWSAMG*SQLTET
Trigger: GGTTTCAGTGAGCTGAGATCACCCCATTGCACTCCA...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR CCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATGCAATCCCAGATACTTaGAGGCTGAGGCAGGAAAAT +
Preference number: 2 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHAIPDT*RLRQEN
Trigger: ATTTTCCTGCCTCAGCCTCCAAGTATCTGGGATTGC...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR TCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCCAGATACTTGGAGGCTaGGGCAGGAAAATCACTGGA +
Preference number: 2 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPQILGG*GRKITG
Trigger: TCCAGTGATTTTCCTGCCTCAGCCTCCAAGTATCTG...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR GCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATGTTGGAAAGCACAATTaGCCCAATAGGACAGTCAGA +
Preference number: 2 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHVGKHN*PNRTVR
Trigger: TCTGACTGTCCTATTGGGGCAATTGTGCTTTCCAAC...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp CGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATTACCGTTGCAGCAATTaGTATCATCAACACCGACAT +
Preference number: 2 (lower is better)
Translates to: RCSNWYHQHRHCTDKVRNYRCSN*YHQHRH
Trigger: ATGTCGGTGTTGATGATACCAATTGCTGCAACGGTA...ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGACTGCACACACATTTCTaGCTCTGCATCCTTGATTGT +
Preference number: 2 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRLHTHF*LCILDC
Trigger: ACAATCAAGGATGCAGAGGCAGAAATGTGTGTGCAG...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp AGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATATACGTCATCAACACCGACATTaGACGGACAAAGTACGTAAT +
Preference number: 2 (lower is better)
Translates to: SNWYHQHRHCTDKVRNIRHQHRH*TDKVRN
Trigger: ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATG...ACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR CCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGATTCCTTCAATGTGGTTaGAAAGCACAATTGCCCCAA +
Preference number: 2 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRFLQCG*KAQLPQ
Trigger: TTGGGGCAATTGTGCTTTCCAACCACATTGAAGGAA...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCATGGACTACTTTACTaGATATATTTCAAGTTGCCC +
Preference number: 2 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHHGLLY*IYFKLP
Trigger: GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAGGTGACTCACATTTTTaGCTACAAATGGCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRGDSHF*LQMAQK
Trigger: CTTTTGAGCCATTTGTAGGCAAAAATGTGAGTCACC...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCAGAGACAGGCACTTTaGTTCTATTCTAATACTTTC +
Preference number: 2 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHQRQAL*FYSNTF
Trigger: GAAAGTATTAGAATAGAACCAAAGTGCCTGTCTCTG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAACAGGGTTAGGTTTCTaGAAGCTTTGTTTTTGTCAA +
Preference number: 2 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRTGLGF*KLCFCQ
Trigger: TTGACAAAAACAAAGCTTGCAGAAACCTAACCCTGT...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGACTTGATTGTACACGCTaGAAATATAGTCAATTTGCA +
Preference number: 2 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRLDCTR*KYSQFA
Trigger: TGCAAATTGACTATATTTGCAGCGTGTACAATCAAG...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR CAA 90 bp GCATCCTTGATTGTACACGCTGCAAATATAGTCAATTTGCATTATTaGTGGTACTTATGTTCCATAAAGTCCACAAACACTGAAGTAGTG +
Preference number: 2 (lower is better)
Translates to: ASLIVHAANIVNLHY*WYLCSIKSTNTEVV
Trigger: CACTACTTCAGTGTTTGTGGACTTTATGGAACATAAGTACCACAAATAATGCAAATTGACTATATTTGCAGCGTGTACAATCAAGGATGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR GCA 72 bp GCCCAGGCTGATCTGGAACTCCTGGCCACAAGGATCTaGCCTATCCTGAAACTTTCTAGGGGCCCCCAGCCA +
Preference number: 3 (lower is better)
Translates to: AQADLELLATRI*PILKLSRGPQP
Trigger: TGGCTGGGGGCCCCTAGAAAGTTTCAGGATAGGGCAGATCCTTGTGGCCAGGAGTTCCAGATCAGCCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR TCA 72 bp GGTGGTGTGCACCTGCAATCCCAGATACTTGGAGGCTaGGGCAGGAAAATCACTGGAATCCGGGAGATGGAG +
Preference number: 3 (lower is better)
Translates to: GGVHLQSQILGG*GRKITGIREME
Trigger: CTCCATCTCCCGGATTCCAGTGATTTTCCTGCCTCAGCCTCCAAGTATCTGGGATTGCAGGTGCACACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR TCA 72 bp ATCTGGAACTCCTGGCCACAAGGATCTGCCCTATCCTaGAACTTTCTAGGGGCCCCCAGCCACCAGTCATCA +
Preference number: 3 (lower is better)
Translates to: IWNSWPQGSALS*NFLGAPSHQSS
Trigger: TGATGACTGGTGGCTGGGGGCCCCTAGAAAGTTTCAGGATAGGGCAGATCCTTGTGGCCAGGAGTTCCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGAAGGCAGAGTACCATTaGTTTCACTTCTGTTGGGAG +
Preference number: 3 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGKAEYH*FHFCWE
Trigger: CTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTT...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTACTCCAGCAGGGCATTaGGAGGCCATTTTAAACAGT +
Preference number: 3 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSTPAGH*EAILNS
Trigger: ACTGTTTAAAATGGCCTCCAAATGCCCTGCTGGAGT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGCTTGGAGGAAGGGCCTaGTATTCTCAAACTTCCTGT +
Preference number: 3 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLLGGRA*YSQTSC
Trigger: ACAGGAAGTTTGAGAATACAAGGCCCTTCCTCCAAG...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTGTTTCTGAATCTGACTaGGTCGATGGTATTCGGCAA +
Preference number: 3 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTVSESD*VDGIRQ
Trigger: TTGCCGAATACCATCGACCAAGTCAGATTCAGAAAC...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449739.6
3UTR-3UTR CAA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGATTAAGATTTTCCACTTaGGGTGCTAGCAGTACACAG +
Preference number: 3 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRLRFST*GASSTQ
Trigger: CTGTGTACTGCTAGCACCCAAAGTGGAAAATCTTAA...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTTAAGATTTTCCACTTaGGGTGCTAGCAGTACACAG +
Preference number: 3 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSLRFST*GASSTQ
Trigger: CTGTGTACTGCTAGCACCCAAAGTGGAAAATCTTAA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCCAGGGAAAAGTAATTaGGGATCATTTCAGATACGC +
Preference number: 3 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSPGKSN*GSFQIR
Trigger: GCGTATCTGAAATGATCCCAAATTACTTTTCCCTGG...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp GCAGCAGCAAATTCTGTGAAAGGCCCACGAAGCTGGAGCATAACCAGTAGAGAAACCAACACAGTGGCTTaGAAAGGGTGGCAGTTATCT +
Preference number: 3 (lower is better)
Translates to: AAANSVKGPRSWSITSRETNTVA*KGWQLS
Trigger: AGATAACTGCCACCCTTTCAAAGCCACTGTGTTGGT...TTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTTCACAGAATTTGCTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR GCA 72 bp AGTTTGGCTTTTCCCTCGAGGTTCTTAATGAGGCTTTaGACCTTCTCCTGGGTTATCTGTCAGGGTGGCAAT +
Preference number: 3 (lower is better)
Translates to: SLAFPSRFLMRL*TFSWVICQGGN
Trigger: ATTGCCACCCTGACAGATAACCCAGGAGAAGGTGCAAAGCCTCATTAAGAACCTCGAGGGAAAAGCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAAAATACCTGCCATACTaGATATCTCAACCAGAGCTA +
Preference number: 3 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRKYLPY*ISQPEL
Trigger: TAGCTCTGGTTGAGATATCAAGTATGGCAGGTATTT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTATAGCACGTTATTTTTaGCGTCTCAGCAAAAGTGAC +
Preference number: 3 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSIARYF*RLSKSD
Trigger: GTCACTTTTGCTGAGACGCAAAAAATAACGTGCTAT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTTCAAGTTTGAAAGTTaGACAATGGGAGAGCAACAG +
Preference number: 3 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSFKFES*TMGEQQ
Trigger: CTGTTGCTCTCCCATTGTCAAACTTTCAAACTTGAA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGCCAGGGAAAAGTAATTaGGGATCATTTCAGATACGC +
Preference number: 3 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLPGKSN*GSFQIR
Trigger: GCGTATCTGAAATGATCCCAAATTACTTTTCCCTGG...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp AACAAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCAACCACCCCAACTGATTaGCACGAACTGCAACTTCTT +
Preference number: 3 (lower is better)
Translates to: NKLMTPTEIGRIQVESGATTPTD*HELQLL
Trigger: AAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGGT...TGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAATTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGTTCAAGTTTGAAAGTTaGACAATGGGAGAGCAACAG +
Preference number: 3 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLFKFES*TMGEQQ
Trigger: CTGTTGCTCTCCCATTGTCAAACTTTCAAACTTGAA...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp TCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAAGTACCGTTGCAGCAATaGGTATCATCAACACCGACA +
Preference number: 3 (lower is better)
Translates to: SESDLVDGIRQSWRNPGEVPLQQ*VSSTPT
Trigger: TGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC...TTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR TCA 72 bp CGGAGAGCAAAAGACATGAAGATCCACATTGGAAGCTaGATCCAAACCAACACAGTGGCTTTGAAAGGGTGG +
Preference number: 3 (lower is better)
Translates to: RRAKDMKIHIGS*IQTNTVALKGW
Trigger: CCACCCTTTCAAAGCCACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR TCA 72 bp CTGCCCCCGTGCTTAAATTCCGGAGAGCAAAAGACATaGAGATCCACATTGGAAGCTGAATCCAAACCAACA +
Preference number: 3 (lower is better)
Translates to: LPPCLNSGEQKT*RSTLEAESKPT
Trigger: TGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTCCGGAATTTAAGCACGGGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR CCA 72 bp AACGCAGCAGCAAATTCTGTGAAAGGCCCACGAAGCTaGAGCATAACCAGTAGAGAACAATTGATGAGGGTA +
Preference number: 3 (lower is better)
Translates to: NAAANSVKGPRS*SITSREQLMRV
Trigger: TACCCTCATCAATTGTTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTTCACAGAATTTGCTGCTGCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR CCA 72 bp TCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTaGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGT +
Preference number: 3 (lower is better)
Translates to: SESDLVDGIRQS*RNPGERSSKFC
Trigger: ACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR TCA 72 bp ACATTGGAAGCTGAATCCAAACCAACACAGTGGCTTTaGAAGGGTGGCAGTTATCTCGCACATATAGCTCTG +
Preference number: 3 (lower is better)
Translates to: TLEAESKPTQWL*KGGSYLAHIAL
Trigger: CAGAGCTATATGTGCGAGATAACTGCCACCCTTTCAAAGCCACTGTGTTGGTTTGGATTCAGCTTCCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR CCA 72 bp AATGGTCCATTTTCAAGGCATGATAAATCTAAGCACTaGCAGCCAGCCTTGGTATGTAACAAACCGCACTGC +
Preference number: 3 (lower is better)
Translates to: NGPFSRHDKSKH*QPALVCNKPHC
Trigger: GCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCTTAGATTTATCATGCCTTGAAAATGGACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp GCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATATACGTCGTACCGTTGCAGCAATaGGTATCATCAACACCGACA +
Preference number: 3 (lower is better)
Translates to: AIGIINTDIARTKYVIYVVPLQQ*VSSTPT
Trigger: TGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC...GACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR CAA 90 bp CGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATTTGATGAGGGTACCGTaGCAGCAATTGGTATCATCA +
Preference number: 3 (lower is better)
Translates to: RCSNWYHQHRHCTDKVRNLMRVP*QQLVSS
Trigger: TGATGATACCAATTGCTGCAACGGTACCCTCATCAA...ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR-3UTR CAA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGATCTGCCTCTGCATCCTaGATTGTACACGCTGCAAAT +
Preference number: 3 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRSASAS*IVHAAN
Trigger: ATTTGCAGCGTGTACAATCAAGGATGCAGAGGCAGA...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR-3UTR CAA 90 bp ACCAGTAGAGAACAATTGATGAGGGTACCGTTGCAGCAATTGGTATCATCAACATTGATGAGGGTACCGTaGCAGCAATTGGTATCATCA +
Preference number: 3 (lower is better)
Translates to: TSREQLMRVPLQQLVSSTLMRVP*QQLVSS
Trigger: TGATGATACCAATTGCTGCAACGGTACCCTCATCAA...TGTTGATGATACCAATTGCTGCAACGGTACCCTCATCAATTGTTCTCTACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR TCA 72 bp CTGACTTCATTCAGGTTCTGGAACTGCTCCAGGCTATaGCAAACTGTTAGAAATAAGACCACAGACTTGCAA +
Preference number: 3 (lower is better)
Translates to: LTSFRFWNCSRL*QTVRNKTTDLQ
Trigger: TTGCAAGTCTGTGGTCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR GCA 72 bp TACCGTTGCAGCAATTGGTATCATCAACACCGACATTaGACGGACAAAGTACGTAATATACGTCTGAAAACG +
Preference number: 3 (lower is better)
Translates to: YRCSNWYHQHRH*TDKVRNIRLKT
Trigger: CGTTTTCAGACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
3UTR CCA 72 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATaGACTACTTTACTGCATATATTTCAAGTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: GNIIYHVRDLYA*TTLLHIFQVAP
Trigger: GGGGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR CAA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATTACCATGTTAGGGACTaGTATGCATGGACTACTTTA +
Preference number: 3 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHYHVRD*YAWTTL
Trigger: TAAAGTAGTCCATGCATACAAGTCCCTAACATGGTA...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR-3UTR CAA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATAAATACCTGCCATACTaGATATCTCAACCAGAGCTA +
Preference number: 3 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHKYLPY*ISQPEL
Trigger: TAGCTCTGGTTGAGATATCAAGTATGGCAGGTATTT...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR TCA 72 bp TATAGAAAAAGGAATGTACACTTTTTGTATTCTTTCTaGGCAGGGCCGGGAGGCAACATCATCTACCATGTT +
Preference number: 3 (lower is better)
Translates to: YRKRNVHFLYSF*AGPGGNIIYHV
Trigger: AACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAGAATACAAAAAGTGTACATTCCTTTTTCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
3UTR TCA 72 bp GAACTCAGGTATCCTAATGGTATAAATACTATAAATTaGTCCAGGAGTGAGTCTCCCTTCCTGACTCTTGAA +
Preference number: 3 (lower is better)
Translates to: ELRYPNGINTIN*SRSESPFLTLE
Trigger: TTCAAGAGTCAGGAAGGGAGACTCACTCCTGGATCAATTTATAGTATTTATACCATTAGGATACCTGAGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR GCA 72 bp ATCACTGCTCCTAGAAAACATACAGGGTTAGGTTTCTaGAAGCTTTGTTTTTGTCAACAGAACAATGCAACA +
Preference number: 3 (lower is better)
Translates to: ITAPRKHTGLGF*KLCFCQQNNAT
Trigger: TGTTGCATTGTTCTGTTGACAAAAACAAAGCTTGCAGAAACCTAACCCTGTATGTTTTCTAGGAGCAGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR CCA 72 bp TCAAAAGCACTTGTGCAAGTACTGGTTCTGGGGTTATaGATAGATTTGAGCAAGGAGGCAAATTTACAAATA +
Preference number: 3 (lower is better)
Translates to: SKALVQVLVLGL*IDLSKEANLQI
Trigger: TATTTGTAAATTTGCCTCCTTGCTCAAATCTATCCATAACCCCAGAACCAGTACTTGCACAAGTGCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGCCGGCCAGCCAAGGCTaGTACGCGCACGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGPASQG*YAHAPA
Trigger: TGCTGGCGCGTGCGCGTATCAGCCTTGGCTGGCCGG...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295890.8
CDS-3UTR CCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACCAGGGCAGGCCCGTaGCGGCGTGCACGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTTRAGP*RRARRA
Trigger: TGCTCGGCGTGCACGCCGCCACGGGCCTGCCCTGGT...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAACCAGGGCAGGCCCGTaGCGGCGTGCACGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRTRAGP*RRARRA
Trigger: TGCTCGGCGTGCACGCCGCCACGGGCCTGCCCTGGT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGACCCACACTGGGAGAGTaGGGCGCTTGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRPTLGE*GAWRRS
Trigger: CGAGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGG...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGACCAGGGCAGGCCCGTaGCGGCGTGCACGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLTRAGP*RRARRA
Trigger: TGCTCGGCGTGCACGCCGCCACGGGCCTGCCCTGGT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGATCCCTAGCCCAAAGCTaGAGGGCAGGGAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRSLAQS*RAGSGR
Trigger: GCGGCCGCTCCCTGCCCTGCAGCTTTGGGCTAGGGA...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGTGGAGAGCAGAATGCTaGCCCACCAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGWRAEC*PTRAGP
Trigger: CGGGCCTGCCCTGGTGGGGCAGCATTCTGCTCTCCA...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCCCACACTGGGAGAGTaGGGCGCTTGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMPTLGE*GAWRRS
Trigger: CGAGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGG...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTTGCCACTGCCCACACTaGGAGAGTGGGGCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTCHCPH*ESGALG
Trigger: GCCAAGCGCCCCACTCTCCCAGTGTGGGCAGTGGCA...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp GGGTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTAACCAGGGCAGGCCCGTaGCGGCGTGCACGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: GYRCSNWYHQHRHCTDKVTRAGP*RRARRA
Trigger: TGCTCGGCGTGCACGCCGCCACGGGCCTGCCCTGGT...TACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGCCCGTAAGGCCACGGTaGAGAGCAGAATGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGPVRPR*RAECCP
Trigger: GGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGG...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp ATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTCCACCAGTATGGAGAGCAGAATGCTaGCCCACCAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: IQVESGAVRSGNHRIPPVWRAEC*PTRAGP
Trigger: CGGGCCTGCCCTGGTGGGGCAGCATTCTGCTCTCCA...TACTGGTGGAATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGCCCACACTGGGAGAGTaGGGCGCTTGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: VPLQQLVSSTPTLHGQSTPTLGE*GAWRRS
Trigger: CGAGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGG...CGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp ATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTCCACCAGTACTGCCAAAGGCAGCGTaGCAGCACCCCGTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: IQVESGAVRSGNHRIPPVLPKAA*QHPVRP
Trigger: TGGCCTTACGGGGTGCTGTCACGCTGCCTTTGGCAG...TACTGGTGGAATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCTGCCAAAGGCAGCGTaGCAGCACCCCGTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMLPKAA*QHPVRP
Trigger: TGGCCTTACGGGGTGCTGTCACGCTGCCTTTGGCAG...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp AACAAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCATCCCTAGCCCAAAGCTaGAGGGCAGGGAGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: NKLMTPTEIGRIQVESGASLAQS*RAGSGR
Trigger: GCGGCCGCTCCCTGCCCTGCAGCTTTGGGCTAGGGA...TGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAATTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGATGCCCCAGGTGTGCCTaGCCACCAGACACCCAATCT +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGCPRCA*PPDTQS
Trigger: AGATTGGGTGTCTGGTGGGCAGGCACACCTGGGGCA...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp ATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTCCACCAGTACCCGTAAGGCCACGGTaGAGAGCAGAATGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: IQVESGAVRSGNHRIPPVPVRPR*RAECCP
Trigger: GGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGG...TACTGGTGGAATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp CGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATCCGGCCAGCCAAGGCTaGTACGCGCACGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RCSNWYHQHRHCTDKVRNPASQG*YAHAPA
Trigger: TGCTGGCGCGTGCGCGTATCAGCCTTGGCTGGCCGG...ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR GCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTTACTGCAGAGACTGGTaGCACTGCCCACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTYCRDW*HCPHWE
Trigger: CTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTA...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAGCCGTTCGCATGTACTaGAGAGACTGGTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRAVRMY*RDWCHC
Trigger: GCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGC...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp TCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAAAGGCCCGTGGCGGCGTaGACGCCGAGCAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: SESDLVDGIRQSWRNPGERPVAA*TPSSTS
Trigger: GGAAGTACTGCTCGGCGTGCACGCCGCCACGGGCCT...TTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGATTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGAACCTTCCTGAACTCTaGAGGGCCCAGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLNLPEL*RAQRRA
Trigger: GGCTCTGCGCTGGGCCCTGCAGAGTTCAGGAAGGTT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGTGCCCCAGGTGTGCCTaGCCACCAGACACCCAATCT +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMCPRCA*PPDTQS
Trigger: AGATTGGGTGTCTGGTGGGCAGGCACACCTGGGGCA...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp AAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCAGTGCCCGTAAGGCCACGGTaGAGAGCAGAATGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: KLMTPTEIGRIQVESGAVPVRPR*RAECCP
Trigger: GGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGG...CACTGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGATGGAGTCGGGTGCAGTaGGGTCAGGAAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRWSRVQ*GQETTE
Trigger: TTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCA...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGATGGAGTCGGGTGCAGTaGGGTCAGGAAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGWSRVQ*GQETTE
Trigger: TTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCA...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAAGATGGAGGTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRRWRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAACCTCCATCT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAAGACAAAAACCTTCCTaGACTCTGCAGGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGRQKPS*TLQGPA
Trigger: CGCTGGGCCCTGCAGAGTTCAGGAAGGTTTTTGTCT...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATAGGCCCGTGGCGGCGTaGACGCCGAGCAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: RCSNWYHQHRHCTDKVRNRPVAA*TPSSTS
Trigger: GGAAGTACTGCTCGGCGTGCACGCCGCCACGGGCCT...ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp ACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTATGGAGAGCAGAATGCTaGCCCACCAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TVAAIGIINTDIARTKYVWRAEC*PTRAGP
Trigger: CGGGCCTGCCCTGGTGGGGCAGCATTCTGCTCTCCA...TACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGGTAGTGCTGGTAGGCTaGCAAAGGCAGCGTGACAGC +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLVVLVG*QRQRDS
Trigger: GCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTAC...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAATTACCTGCTGTAACTaGCCCAGGTGTGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGITCCN*PRCACP
Trigger: TGGGCAGGCACACCTGGGGCAGTTACAGCAGGTAAT...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTATGTACTGCAGAGACTaGTGCCACTGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSMYCRD*CHCPHW
Trigger: CCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACAT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGCTCTGCAGATTCCGCTaGATGTCAGGGATTGGGGAT +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGLCRFR*MSGIGD
Trigger: ATCCCCAATCCCTGACATCCAGCGGAATCTGCAGAG...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTGGAGTGCAATGGGGTaGTCTCAGCTCACTGAAACC +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSWSAMG*SQLTET
Trigger: GGTTTCAGTGAGCTGAGATCACCCCATTGCACTCCA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGTTTTTGTATTCTTTCTaGGCAGGGCCGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGFLYSF*AGPGGN
Trigger: GTTGCCTCCCGGCCCTGCTCAGAAAGAATACAAAAA...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGAGACAAAAACCTTCCTaGACTCTGCAGGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMRQKPS*TLQGPA
Trigger: CGCTGGGCCCTGCAGAGTTCAGGAAGGTTTTTGTCT...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTAGAAAAACCTGCTTCTaGATGTGCTGCCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTRKTCF*MCCPRA
Trigger: AGCACGGGGGCAGCACATTCAGAAGCAGGTTTTTCT...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000507544.3
CDS-3UTR GCA 90 bp ACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTACCGGCACAGCATTTCTaGACCACGGCGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TVAAIGIINTDIARTKYVPAQHF*TTAEPR
Trigger: TCTGGGCTCCGCCGTGGTGCAGAAATGCTGTGCCGG...TACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATAGGCCCGTGGCGGCGTaGACGCCGAGCAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHRPVAA*TPSSTS
Trigger: GGAAGTACTGCTCGGCGTGCACGCCGCCACGGGCCT...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGAATGTGCTGCCCCCGTaGTTAAATTCCGGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGNVLPP*LNSGEQ
Trigger: TTGCTCTCCGGAATTTAAGCACGGGGGCAGCACATT...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp ATCTCCACTATTAACAAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGCCCACACTGGGAGAGTaGGGCGCTTGGCGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: ISTINKLMTPTEIGRIQVPTLGE*GAWRRS
Trigger: CGAGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGG...CACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAATTTGTTAATAGTGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTTTGCACCTTCTCCTaGGTTATCTGTCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGLCTFS*VICQGG
Trigger: GCCACCCTGACAGATAACCCAGGAGAAGGTGCAAAG...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGATTGGACCACCCCAACTaGTTTGCACGAACTGCAACT +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRLDHPN*FARTAT
Trigger: AGTTGCAGTTCGTGCAAATCAGTTGGGGTGGTCCAA...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCCAACACAGTGGCTTTaGAAGGGTGGCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSPTQWL*KGGSYL
Trigger: GAGATAACTGCCACCCTTTCAAAGCCACTGTGTTGG...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACCAACACAGTGGCTTTaGAAGGGTGGCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGPTQWL*KGGSYL
Trigger: GAGATAACTGCCACCCTTTCAAAGCCACTGTGTTGG...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTAACAGAAAAACCTTCTaGATGTGCTGCCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSNRKTF*MCCPRA
Trigger: AGCACGGGGGCAGCACATTCAGAAGGTTTTTCTGTT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295890.8
CDS-3UTR TCA 90 bp TTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATGGAGTCGGGTGCAGTaGGGTCAGGAAACCACAGAA +
Preference number: 4 (lower is better)
Translates to: LVDGIRQSWRNPGERSSKWSRVQ*GQETTE
Trigger: TTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCA...TTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCAGATACTTGGAGGCTaGGGCAGGAAAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSQILGG*GRKITG
Trigger: TCCAGTGATTTTCCTGCCTCAGCCTCCAAGTATCTG...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGAAATTGATCCAGGAGTaGGTCTCCCTTCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGKLIQE*VSLPDS
Trigger: AGAGTCAGGAAGGGAGACTCACTCCTGGATCAATTT...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAAGGCCCGTGGCGGCGTaGACGCCGAGCAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRRPVAA*TPSSTS
Trigger: GGAAGTACTGCTCGGCGTGCACGCCGCCACGGGCCT...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGTTGTCCAGGCTGGAGTaGAATGGGGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLLSRLE*NGVISA
Trigger: AGCTGAGATCACCCCATTGCACTCCAGCCTGGACAA...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGGCAAATTTTCCACCTTaGCCAGGATGTAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGANFPP*PGCSAG
Trigger: ACCAGCACTACATCCTGGCCAAGGTGGAAAATTTGC...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTGCCTGGCATCTCTTTTaGACCACCCCAACTGATTTG +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSAWHLF*TTPTDL
Trigger: CAAATCAGTTGGGGTGGTCCAAAAGAGATGCCAGGC...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGAAAGGCCCACGAAGCTaGAGCATAACCAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGKGPRS*SITSRE
Trigger: TTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTT...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGATGGGTAACACCCCTGTaGGGAAGGGTAACACAAACA +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGWVTPL*GRVTQT
Trigger: TGTTTGTGTTACCCTTCCCCACAGGGGTGTTACCCA...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGTTGGACCACCCCAACTaGTTTGCACGAACTGCAACT +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMLDHPN*FARTAT
Trigger: AGTTGCAGTTCGTGCAAATCAGTTGGGGTGGTCCAA...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGGGAGAGCAAAAGACATaGAGATCCACATTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGGEQKT*RSTLEA
Trigger: AGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTCC...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTGTGATCTCAGCTCACTaGAACCTCTGTATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTVISAH*NLCIPG
Trigger: ACCTGGAATACAGAGGTTTCAGTGAGCTGAGATCAC...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp AACAAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCAAGATGGAGGTTGCAGTaGGCTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: NKLMTPTEIGRIQVESGARWRLQ*AEIAPL
Trigger: CAGTGGCGCAATCTCAGCTCACTGCAACCTCCATCT...TGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAATTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTAAATTGATCCAGGAGTaGGTCTCCCTTCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSKLIQE*VSLPDS
Trigger: AGAGTCAGGAAGGGAGACTCACTCCTGGATCAATTT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGGCTGTTAAAGGTACCTaGAAAGTCTTCTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGAVKGT*KVFSPS
Trigger: ACTTGGGGAGAAGACTTTTCAGGTACCTTTAACAGC...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCCGGCACAGCATTTCTaGACCACGGCGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHPAQHF*TTAEPR
Trigger: TCTGGGCTCCGCCGTGGTGCAGAAATGCTGTGCCGG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp ACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTATACTGCAGAGACTGGTaGCACTGCCCACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: TVAAIGIINTDIARTKYVYCRDW*HCPHWE
Trigger: CTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTA...TACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp CAATTGATGAGGGTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGCCGTTCGCATGTACTaGAGAGACTGGTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QLMRVPLQQLVSSTPTLHAVRMY*RDWCHC
Trigger: GCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGC...GTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTACCCTCATCAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTCCACCCCAACTGATTTaGACGAACTGCAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTPPQLI*TNCNFL
Trigger: CAAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGG...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp ATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTCCACCAGTAAATGTGCTGCCCCCGTaGTTAAATTCCGGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: IQVESGAVRSGNHRIPPVNVLPP*LNSGEQ
Trigger: TTGCTCTCCGGAATTTAAGCACGGGGGCAGCACATT...TACTGGTGGAATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGGTTGGAAAGCACAATTaGCCCAATAGGACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGVGKHN*PNRTVR
Trigger: TCTGACTGTCCTATTGGGGCAATTGTGCTTTCCAAC...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGACACATTTCTGCCTCTaGATCCTTGATTGTACACGC +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGTHFCL*ILDCTR
Trigger: GCGTGTACAATCAAGGATGCAGAGGCAGAAATGTGT...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGCAATTATCTGGGTTCTaGTTGAACCAGCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGQLSGF*LNQLVR
Trigger: CCTTACGAGCTGGTTCAAGCAGAACCCAGATAATTG...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp TGTGCTGCCCCCGTGCTTAAATTCCGGAGAGCAAAAGACATGAAGATCCACATTATGTACTGCAGAGACTaGTGCCACTGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: CAAPVLKFRRAKDMKIHIMYCRD*CHCPHW
Trigger: CCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACAT...AATGTGGATCTTCATGTCTTTTGCTCTCCGGAATTTAAGCACGGGGGCAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCCCGTAAGGCCACGGTaGAGAGCAGAATGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHPVRPR*RAECCP
Trigger: GGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAAAAGGCCCACGAAGCTaGAGCATAACCAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRKGPRS*SITSRE
Trigger: TTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTCTTCTCCCCAAGTTTaGCTTTTCCCTCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSSSPQV*LFPRGS
Trigger: AGAACCTCGAGGGAAAAGCCAAACTTGGGGAGAAGA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp TCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCGTGATCTCAGCTCACTaGAACCTCTGTATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SDLVDGIRQSWRNPGERSVISAH*NLCIPG
Trigger: ACCTGGAATACAGAGGTTTCAGTGAGCTGAGATCAC...GCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR TCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCTGCCTCTGCATCCTTaGTTGTACACGCTGCAAATA +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMLPLHP*LYTLQI
Trigger: TATTTGCAGCGTGTACAATCAAGGATGCAGAGGCAG...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTGCTGTTAAAGGTACCTaGAAAGTCTTCTCCCCAAGT +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTAVKGT*KVFSPS
Trigger: ACTTGGGGAGAAGACTTTTCAGGTACCTTTAACAGC...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGACCGGCACAGCATTTCTaGACCACGGCGGAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRPAQHF*TTAEPR
Trigger: TCTGGGCTCCGCCGTGGTGCAGAAATGCTGTGCCGG...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCTGGAGAGCAGAATGCTaGCCCACCAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPWRAEC*PTRAGP
Trigger: CGGGCCTGCCCTGGTGGGGCAGCATTCTGCTCTCCA...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAGTTGGAAAGCACAATTaGCCCAATAGGACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRVGKHN*PNRTVR
Trigger: TCTGACTGTCCTATTGGGGCAATTGTGCTTTCCAAC...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACACATTTCTGCCTCTaGATCCTTGATTGTACACGC +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTTHFCL*ILDCTR
Trigger: GCGTGTACAATCAAGGATGCAGAGGCAGAAATGTGT...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTCTGCACACACATTTCTaGCTCTGCATCCTTGATTGT +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTLHTHF*LCILDC
Trigger: ACAATCAAGGATGCAGAGGCAGAAATGTGTGTGCAG...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATAACCTTCCTGAACTCTaGAGGGCCCAGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHNLPEL*RAQRRA
Trigger: GGCTCTGCGCTGGGCCCTGCAGAGTTCAGGAAGGTT...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGACAATTATCTGGGTTCTaGTTGAACCAGCTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRQLSGF*LNQLVR
Trigger: CCTTACGAGCTGGTTCAAGCAGAACCCAGATAATTG...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAGTGGCTTTGAAAGGGTaGCAGTTATCTCGCACATAT +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGVALKG*QLSRTY
Trigger: ATATGTGCGAGATAACTGCCACCCTTTCAAAGCCAC...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGGCAATCCCAGATACTTaGAGGCTGAGGCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMAIPDT*RLRQEN
Trigger: ATTTTCCTGCCTCAGCCTCCAAGTATCTGGGATTGC...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTCTGGTTCTGGGGTTATaGATAGATTTGAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTLVLGL*IDLSKE
Trigger: CTCCTTGCTCAAATCTATCCATAACCCCAGAACCAG...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGAACTTACGCGATGTCTaGGAAGACTGTAATCCCATA +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGNLRDV*EDCNPI
Trigger: TATGGGATTACAGTCTTCCCAGACATCGCGTAAGTT...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCCTGCCAAAGGCAGCGTaGCAGCACCCCGTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPLPKAA*QHPVRP
Trigger: TGGCCTTACGGGGTGCTGTCACGCTGCCTTTGGCAG...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp GATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTTTGGACCACCCCAACTaGTTTGCACGAACTGCAACT +
Preference number: 4 (lower is better)
Translates to: DGIRQSWRNPGERSSKFCLDHPN*FARTAT
Trigger: AGTTGCAGTTCGTGCAAATCAGTTGGGGTGGTCCAA...ACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR TCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGATCCACATTGGAAGCTaGATCCAAACCAACACAGTG +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLIHIGS*IQTNTV
Trigger: CACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGAT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp TCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAATGGAGTGCAATGGGGTaGTCTCAGCTCACTGAAACC +
Preference number: 4 (lower is better)
Translates to: SESDLVDGIRQSWRNPGEWSAMG*SQLTET
Trigger: GGTTTCAGTGAGCTGAGATCACCCCATTGCACTCCA...TTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGATTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR TCA 90 bp TGTGCTGCCCCCGTGCTTAAATTCCGGAGAGCAAAAGACATGAAGATCCACATTTTTTTGTATTCTTTCTaGGCAGGGCCGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: CAAPVLKFRRAKDMKIHIFLYSF*AGPGGN
Trigger: GTTGCCTCCCGGCCCTGCTCAGAAAGAATACAAAAA...AATGTGGATCTTCATGTCTTTTGCTCTCCGGAATTTAAGCACGGGGGCAGCACA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR TCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTTACATGTTTACGGTATaGGAGCTGAAACTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTYMFTV*ELKLEG
Trigger: GCCTTCTAGTTTCAGCTCTCATACCGTAAACATGTA...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTATGGGAAAAGGAGACTaGTTTCCCTCATGCCATTAT +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTMGKGD*FPSCHY
Trigger: ATAATGGCATGAGGGAAATCAGTCTCCTTTTCCCAT...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGACCACCAGTCATCACATaGGCATACAAAAGACACTTA +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRPPVIT*AYKRHL
Trigger: TAAGTGTCTTTTGTATGCTCATGTGATGACTGGTGG...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTGAGTATTTACCATCCTaGAGTCAGGTAAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTEYLPS*SQVSSG
Trigger: ACCTGAACTTACCTGACTTCAGGATGGTAAATACTC...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTGAGTATTTACCATCCTaGAGTCAGGTAAGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSEYLPS*SQVSSG
Trigger: ACCTGAACTTACCTGACTTCAGGATGGTAAATACTC...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTACCTCCTCTGAGATGTaGACTGTGGGAAAACATTTT +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSTSSEM*TVGKHF
Trigger: AAAATGTTTTCCCACAGTTCACATCTCAGAGGAGGT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTGTAGCTAACTGTTCCTaGACAGAAAAACCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSVANCS*TEKPAS
Trigger: AGAAGCAGGTTTTTCTGTTCAGGAACAGTTAGCTAC...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507544.3
CDS-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATTACTGCAGAGACTGGTaGCACTGCCCACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHYCRDW*HCPHWE
Trigger: CTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTA...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp GCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATATACGTCTACTGCAGAGACTGGTaGCACTGCCCACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: AIGIINTDIARTKYVIYVYCRDW*HCPHWE
Trigger: CTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTA...GACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp GCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATATACGTCGCCGTTCGCATGTACTaGAGAGACTGGTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: AIGIINTDIARTKYVIYVAVRMY*RDWCHC
Trigger: GCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGC...GACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp AGACATGAAGATCCACATTGGAAGCTGAATCCAAACCAACACAGTGGCTTTGAAGTAGTGCTGGTAGGCTaGCAAAGGCAGCGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RHEDPHWKLNPNQHSGFEVVLVG*QRQRDS
Trigger: GCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTAC...TTCAAAGCCACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCATCAACACCGACATTaGACGGACAAAGTACGTAAT +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSHQHRH*TDKVRN
Trigger: ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATG...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACCTCAATAGGCAACTaGCCTTCTGGTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTTSIGN*PSGFLL
Trigger: AAGAAGAAAACCAGAAGGGCAGTTGCCTATTGAGGT...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp TTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCAGTGAGGACCTCAATAGGCAACTaGCCTTCTGGTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LMTPTEIGRIQVESGAVRTSIGN*PSGFLL
Trigger: AAGAAGAAAACCAGAAGGGCAGTTGCCTATTGAGGT...CCTCACTGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR GCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAACCTCAATAGGCAACTaGCCTTCTGGTTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGTSIGN*PSGFLL
Trigger: AAGAAGAAAACCAGAAGGGCAGTTGCCTATTGAGGT...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTTACTATGACCTAAGCTaGACACACATTTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTYYDLS*THISAS
Trigger: AGAGGCAGAAATGTGTGTGCAGCTTAGGTCATAGTA...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGATACTATGACCTAAGCTaGACACACATTTCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGYYDLS*THISAS
Trigger: AGAGGCAGAAATGTGTGTGCAGCTTAGGTCATAGTA...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGATTCTTAATGAGGCTTTaGACCTTCTCCTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRFLMRL*TFSWVI
Trigger: GATAACCCAGGAGAAGGTGCAAAGCCTCATTAAGAA...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGGGTCTGCATTCCTACTaGTTCTGGGACTTAAATCTG +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMGLHSY*FWDLNL
Trigger: CAGATTTAAGTCCCAGAAGCAGTAGGAATGCAGACC...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTGAAGCCTGGCATCTCTTTTaGACCACCCCAACTGATTTG +
Preference number: 4 (lower is better)
Translates to: GIRQSWRNPGERSSKFCEAWHLF*TTPTDL
Trigger: CAAATCAGTTGGGGTGGTCCAAAAGAGATGCCAGGC...TTCACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR CCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGGTGGCTTTGAAAGGGTaGCAGTTATCTCGCACATAT +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLVALKG*QLSRTY
Trigger: ATATGTGCGAGATAACTGCCACCCTTTCAAAGCCAC...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGATACCGTTGCAGCAATTaGTATCATCAACACCGACAT +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRYRCSN*YHQHRH
Trigger: ATGTCGGTGTTGATGATACCAATTGCTGCAACGGTA...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp ATAGGCAGAATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTAAAGGCCCACGAAGCTaGAGCATAACCAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: IGRIQVESGAVRSGNHRIKGPRS*SITSRE
Trigger: TTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTT...AATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGATTCTGCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGTTTCTGAATCTGACTTaGTCGATGGTATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGFLNLT*SMVFGK
Trigger: TTTGCCGAATACCATCGACCAAGTCAGATTCAGAAA...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTTCCTTCAATGTGGTTaGAAAGCACAATTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSFLQCG*KAQLPQ
Trigger: TTGGGGCAATTGTGCTTTCCAACCACATTGAAGGAA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCTGGTTCTGGGGTTATaGATAGATTTGAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LSEQGREATSSTMLGTCMLVLGL*IDLSKE
Trigger: CTCCTTGCTCAAATCTATCCATAACCCCAGAACCAG...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTGGACGGGTAAATGGGTaGTTCTTAGATGAAGATATG +
Preference number: 4 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTGRVNG*FLDEDM
Trigger: CATATCTTCATCTAAGAACCACCCATTTACCCGTCC...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR CAA 72 bp AAGTTTGGCTTTTCCCTCGAGGTTCTTAATGAGGCTTaGCACCTTCTCCTGGGTTATCTGTCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: KFGFSLEVLNEA*HLLLGYLSGWQ
Trigger: TTGCCACCCTGACAGATAACCCAGGAGAAGGTGCAAAGCCTCATTAAGAACCTCGAGGGAAAAGCCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp TCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACCAACACAGTGGCTTTaGAAGGGTGGCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: SESDLVDGIRQSWRNPGEPTQWL*KGGSYL
Trigger: GAGATAACTGCCACCCTTTCAAAGCCACTGTGTTGG...TTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp ATAGGCAGAATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTATCCACATTGGAAGCTaGATCCAAACCAACACAGTG +
Preference number: 4 (lower is better)
Translates to: IGRIQVESGAVRSGNHRIIHIGS*IQTNTV
Trigger: CACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGAT...AATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGATTCTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAAACTGCTCCAGGCTATaGCAAACTGTTAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGNCSRL*QTVRNK
Trigger: CTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTT...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACATTCATTAAGACAGTaGATCTGGCCTAGAGACAAA +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGHSLRQ*IWPRDK
Trigger: TTTGTCTCTAGGCCAGATTCACTGTCTTAATGAATG...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTCCCTTCCTGACTCTTaGAATGAGAAGCATTCATTA +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSSLPDS*NEKHSL
Trigger: TAATGAATGCTTCTCATTTCAAGAGTCAGGAAGGGA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAGCCGTTCGCATGTACTaGAGAGACTGGTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRAVRMY*RDWCHC
Trigger: GCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGC...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp TGTAGAGCACAAATCTCCACTATTAACAAATTGATGACGCCAACAGAGATAGGCGTAGTGCTGGTAGGCTaGCAAAGGCAGCGTGACAGC +
Preference number: 4 (lower is better)
Translates to: CRAQISTINKLMTPTEIGVVLVG*QRQRDS
Trigger: GCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTAC...GCCTATCTCTGTTGGCGTCATCAATTTGTTAATAGTGGAGATTTGTGCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAGTAGTGCTGGTAGGCTaGCAAAGGCAGCGTGACAGC +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRVVLVG*QRQRDS
Trigger: GCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTAC...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGCATCAACACCGACATTaGACGGACAAAGTACGTAAT +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLHQHRH*TDKVRN
Trigger: ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATG...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAGGTGACTCACATTTTTaGCTACAAATGGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRGDSHF*LQMAQK
Trigger: CTTTTGAGCCATTTGTAGGCAAAAATGTGAGTCACC...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTGGTGACTCACATTTTTaGCTACAAATGGCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSGDSHF*LQMAQK
Trigger: CTTTTGAGCCATTTGTAGGCAAAAATGTGAGTCACC...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATTACCTGCTGTAACTaGCCCAGGTGTGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHITCCN*PRCACP
Trigger: TGGGCAGGCACACCTGGGGCAGTTACAGCAGGTAAT...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATGTACTGCAGAGACTaGTGCCACTGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHMYCRD*CHCPHW
Trigger: CCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACAT...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp ACCAGTAGAGAACAATTGATGAGGGTACCGTTGCAGCAATTGGTATCATCAACAATGTACTGCAGAGACTaGTGCCACTGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: TSREQLMRVPLQQLVSSTMYCRD*CHCPHW
Trigger: CCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACAT...TGTTGATGATACCAATTGCTGCAACGGTACCCTCATCAATTGTTCTCTACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGTACCGTTGCAGCAATTaGTATCATCAACACCGACAT +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLYRCSN*YHQHRH
Trigger: ATGTCGGTGTTGATGATACCAATTGCTGCAACGGTA...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp ATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTGAAAGGCCCACGAAGCTaGAGCATAACCAGTAGAGAA +
Preference number: 4 (lower is better)
Translates to: MVFGKVGEIQENAAANSVKGPRS*SITSRE
Trigger: TTCTCTACTGGTTATGCTCCAGCTTCGTGGGCCTTT...CACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp TCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAAGGTATTCGGCAAAGTTaGCGAAATCCAGGAGAACGC +
Preference number: 4 (lower is better)
Translates to: SESDLVDGIRQSWRNPGEGIRQS*RNPGER
Trigger: GCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACC...TTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGATTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp ACCAACACAGTGGCTTTGAAAGGGTGGCAGTTATCTCGCACATATAGCTCTGAAGGTATTCGGCAAAGTTaGCGAAATCCAGGAGAACGC +
Preference number: 4 (lower is better)
Translates to: TNTVALKGWQLSRTYSSEGIRQS*RNPGER
Trigger: GCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACC...TTCAGAGCTATATGTGCGAGATAACTGCCACCCTTTCAAAGCCACTGTGTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR CCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTAGGCAACTGCCCTTCTaGTTTTCTTCTTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSRQLPF*FSSLTK
Trigger: TTTAGTCAAAGAAGAAAACCAGAAGGGCAGTTGCCT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAAGGCAACTGCCCTTCTaGTTTTCTTCTTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRRQLPF*FSSLTK
Trigger: TTTAGTCAAAGAAGAAAACCAGAAGGGCAGTTGCCT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGTTCCTTCAATGTGGTTaGAAAGCACAATTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLFLQCG*KAQLPQ
Trigger: TTGGGGCAATTGTGCTTTCCAACCACATTGAAGGAA...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTCAATTCCTTCAATGTaGTTGGAAAGCACAATTGCC +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSSIPSM*LESTIA
Trigger: GGCAATTGTGCTTTCCAACCACATTGAAGGAATTGA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGATCAATTCCTTCAATGTaGTTGGAAAGCACAATTGCC +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRSIPSM*LESTIA
Trigger: GGCAATTGTGCTTTCCAACCACATTGAAGGAATTGA...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GGGTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTAGGAGAGCAAAAGACATaGAGATCCACATTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GYRCSNWYHQHRHCTDKVGEQKT*RSTLEA
Trigger: AGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTCC...TACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATTGGAGTGCAATGGGGTaGTCTCAGCTCACTGAAACC +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHWSAMG*SQLTET
Trigger: GGTTTCAGTGAGCTGAGATCACCCCATTGCACTCCA...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAAAAGTCCACAAACACTaGAGTAGTGAATACCAAATC +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRKVHKH*SSEYQI
Trigger: GATTTGGTATTCACTACTTCAGTGTTTGTGGACTTT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTAAAGTCCACAAACACTaGAGTAGTGAATACCAAATC +
Preference number: 4 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSKVHKH*SSEYQI
Trigger: GATTTGGTATTCACTACTTCAGTGTTTGTGGACTTT...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp TCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCCTGATTTGCACGAACTaGAACTTCTTGGTTAAGATG +
Preference number: 4 (lower is better)
Translates to: SDLVDGIRQSWRNPGERSLICTN*NFLVKM
Trigger: CATCTTAACCAAGAAGTTGCAGTTCGTGCAAATCAG...GCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR GCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACATGGACTACTTTACTaGATATATTTCAAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGHGLLY*IYFKLP
Trigger: GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATG...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACAGAGACAGGCACTTTaGTTCTATTCTAATACTTTC +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGQRQAL*FYSNTF
Trigger: GAAAGTATTAGAATAGAACCAAAGTGCCTGTCTCTG...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAAGGGACTTGTATGCATaGACTACTTTACTGCATATA +
Preference number: 4 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRRDLYA*TTLLHI
Trigger: TATATGCAGTAAAGTAGTCCATGCATACAAGTCCCT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCTCTGCAGATTCCGCTaGATGTCAGGGATTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHLCRFR*MSGIGD
Trigger: ATCCCCAATCCCTGACATCCAGCGGAATCTGCAGAG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCTTTGCACCTTCTCCTaGGTTATCTGTCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHLCTFS*VICQGG
Trigger: GCCACCCTGACAGATAACCCAGGAGAAGGTGCAAAG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACATTCCTACTGCTTCTaGGACTTAAATCTGACATAT +
Preference number: 4 (lower is better)
Translates to: EQGREATSSTMLGTCMHGHSYCF*DLNLTY
Trigger: ATATGTCAGATTTAAGTCCCAGAAGCAGTAGGAATG...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATAACAGAAAAACCTTCTaGATGTGCTGCCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHNRKTF*MCCPRA
Trigger: AGCACGGGGGCAGCACATTCAGAAGGTTTTTCTGTT...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000449739.6
CDS-3UTR TCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATCAGATACTTGGAGGCTaGGGCAGGAAAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHQILGG*GRKITG
Trigger: TCCAGTGATTTTCCTGCCTCAGCCTCCAAGTATCTG...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATTTTTTGTATTCTTTCTaGGCAGGGCCGGGAGGCAAC +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHFLYSF*AGPGGN
Trigger: GTTGCCTCCCGGCCCTGCTCAGAAAGAATACAAAAA...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATCCACCCCAACTGATTTaGACGAACTGCAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: RCSNWYHQHRHCTDKVRNPPQLI*TNCNFL
Trigger: CAAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGG...ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATAATGTGCTGCCCCCGTaGTTAAATTCCGGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHNVLPP*LNSGEQ
Trigger: TTGCTCTCCGGAATTTAAGCACGGGGGCAGCACATT...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp GTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTACCGTTGCAGCAATTaGTATCATCAACACCGACAT +
Preference number: 4 (lower is better)
Translates to: VPLQQLVSSTPTLHGQSTYRCSN*YHQHRH
Trigger: ATGTCGGTGTTGATGATACCAATTGCTGCAACGGTA...CGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTTACCGTTGCAGCAATTaGTATCATCAACACCGACAT +
Preference number: 4 (lower is better)
Translates to: DGIRQSWRNPGERSSKFCYRCSN*YHQHRH
Trigger: ATGTCGGTGTTGATGATACCAATTGCTGCAACGGTA...ACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATGGTATTCGGCAAAGTTaGCGAAATCCAGGAGAACGC +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHGIRQS*RNPGER
Trigger: GCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACC...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CCA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGATTATTTTGAGATCTTaGAGGAAGGGCCTTGTATTC +
Preference number: 4 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLIILRS*RKGLVF
Trigger: GAATACAAGGCCCTTCCTCCAAGATCTCAAAATAAT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR CAA 72 bp CAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTaGCTTCCACTGTTCTTCAGGTCTCCAAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: QTPNLARLPLKV*LPLFFRSPSLF
Trigger: GAACAGACTTGGAGACCTGAAGAACAGTGGAAGCAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp TGTAGAGCACAAATCTCCACTATTAACAAATTGATGACGCCAACAGAGATAGGCAACAGAAAAACCTTCTaGATGTGCTGCCCCCGTGCT +
Preference number: 4 (lower is better)
Translates to: CRAQISTINKLMTPTEIGNRKTF*MCCPRA
Trigger: AGCACGGGGGCAGCACATTCAGAAGGTTTTTCTGTT...GCCTATCTCTGTTGGCGTCATCAATTTGTTAATAGTGGAGATTTGTGCTCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp AGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATATACGTCAGATACTTGGAGGCTaGGGCAGGAAAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: SNWYHQHRHCTDKVRNIRQILGG*GRKITG
Trigger: TCCAGTGATTTTCCTGCCTCAGCCTCCAAGTATCTG...ACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR TCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCTGCCTCTGCATCCTTaGTTGTACACGCTGCAAATA +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHLPLHP*LYTLQI
Trigger: TATTTGCAGCGTGTACAATCAAGGATGCAGAGGCAG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp TCTGAATCTGACTTGGTCGATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACATCAACACCGACATTaGACGGACAAAGTACGTAAT +
Preference number: 4 (lower is better)
Translates to: SESDLVDGIRQSWRNPGEHQHRH*TDKVRN
Trigger: ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATG...TTCTCCTGGATTTCGCCAACTTTGCCGAATACCATCGACCAAGTCAGATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR GCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCTTGTCCAGGCTGGAGTaGAATGGGGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPLSRLE*NGVISA
Trigger: AGCTGAGATCACCCCATTGCACTCCAGCCTGGACAA...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR GCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATGCTCAAAAGCACTTGTaGAAGTACTGGTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHAQKHL*KYWFWG
Trigger: ACCCCAGAACCAGTACTTGCACAAGTGCTTTTGAGC...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTTTTCTGAATCTGACTTaGTCGATGGTATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: DGIRQSWRNPGERSSKFCFLNLT*SMVFGK
Trigger: TTTGCCGAATACCATCGACCAAGTCAGATTCAGAAA...ACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GAGAGCAAAAGACATGAAGATCCACATTGGAAGCTGAATCCAAACCAACACAGTGCAATCCCAGATACTTaGAGGCTGAGGCAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ESKRHEDPHWKLNPNQHSAIPDT*RLRQEN
Trigger: ATTTTCCTGCCTCAGCCTCCAAGTATCTGGGATTGC...ACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR CCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATTCTTCTCCCCAAGTTTaGCTTTTCCCTCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHSSPQV*LFPRGS
Trigger: AGAACCTCGAGGGAAAAGCCAAACTTGGGGAGAAGA...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGAGCAAAAGACATGAAGATCCACATTGGAAGCTGAATCCAAACCAACACAGTATTTTCCACCTAGCTTaGCCAGGATGTAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ESKRHEDPHWKLNPNQHSIFHLA*PGCSAG
Trigger: ACCAGCACTACATCCTGGCCAAGCTAGGTGGAAAAT...ACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510031.1
3UTR CAA 72 bp AGTAGAGAACAATTGATGAGGGTACCGTTGCAGCAATaGGTATCATCAACACCGACATTGCACGGACAAAGT +
Preference number: 4 (lower is better)
Translates to: SREQLMRVPLQQ*VSSTPTLHGQS
Trigger: ACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTACCCTCATCAATTGTTCTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR TCA 90 bp GGCAGTTATCTCGCACATATAGCTCTGAAATTAGCCTCCTCATATTCTTTAGATCCAACACAGTGGCTTTaGAAGGGTGGCAGTTATCTC +
Preference number: 4 (lower is better)
Translates to: GSYLAHIALKLASSYSLDPTQWL*KGGSYL
Trigger: GAGATAACTGCCACCCTTTCAAAGCCACTGTGTTGG...ATCTAAAGAATATGAGGAGGCTAATTTCAGAGCTATATGTGCGAGATAACTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR GCA 90 bp AACAAATTGATGACGCCAACAGAGATAGGCAGAATCCAAGTGGAGTCGGGTGCACATGGACTACTTTACTaGATATATTTCAAGTTGCCC +
Preference number: 4 (lower is better)
Translates to: NKLMTPTEIGRIQVESGAHGLLY*IYFKLP
Trigger: GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATG...TGCACCCGACTCCACTTGGATTCTGCCTATCTCTGTTGGCGTCATCAATTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAGCTCAAAAGCACTTGTaGAAGTACTGGTTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRAQKHL*KYWFWG
Trigger: ACCCCAGAACCAGTACTTGCACAAGTGCTTTTGAGC...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCTGCACACACATTTCTaGCTCTGCATCCTTGATTGT +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHLHTHF*LCILDC
Trigger: ACAATCAAGGATGCAGAGGCAGAAATGTGTGTGCAG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAGCAAATTTTCCACCTTaGCCAGGATGTAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRANFPP*PGCSAG
Trigger: ACCAGCACTACATCCTGGCCAAGGTGGAAAATTTGC...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATATACGTCGTGGCTTTGAAAGGGTaGCAGTTATCTCGCACATAT +
Preference number: 4 (lower is better)
Translates to: AIGIINTDIARTKYVIYVVALKG*QLSRTY
Trigger: ATATGTGCGAGATAACTGCCACCCTTTCAAAGCCAC...GACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCGGTATTCGGCAAAGTTaGCGAAATCCAGGAGAACGC +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPGIRQS*RNPGER
Trigger: GCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACC...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCGTGATCTCAGCTCACTaGAACCTCTGTATTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPVISAH*NLCIPG
Trigger: ACCTGGAATACAGAGGTTTCAGTGAGCTGAGATCAC...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATATGGGAAAAGGAGACTaGTTTCCCTCATGCCATTAT +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHMGKGD*FPSCHY
Trigger: ATAATGGCATGAGGGAAATCAGTCTCCTTTTCCCAT...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATCCACCAGTCATCACATaGGCATACAAAAGACACTTA +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHPPVIT*AYKRHL
Trigger: TAAGTGTCTTTTGTATGCTCATGTGATGACTGGTGG...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCCCACCCCAACTGATTTaGACGAACTGCAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPPPQLI*TNCNFL
Trigger: CAAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGG...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GAGAGCAAAAGACATGAAGATCCACATTGGAAGCTGAATCCAAACCAACACAGTCATCAACACCGACATTaGACGGACAAAGTACGTAAT +
Preference number: 4 (lower is better)
Translates to: ESKRHEDPHWKLNPNQHSHQHRH*TDKVRN
Trigger: ATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATG...ACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp AGCAATTGGTATCATCAACACCGACATTGCACGGACAAAGTACGTAATATACGTGTGGCTTTGAAAGGGTaGCAGTTATCTCGCACATAT +
Preference number: 4 (lower is better)
Translates to: SNWYHQHRHCTDKVRNIRVALKG*QLSRTY
Trigger: ATATGTGCGAGATAACTGCCACCCTTTCAAAGCCAC...ACGTATATTACGTACTTTGTCCGTGCAATGTCGGTGTTGATGATACCAATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATGGACGGGTAAATGGGTaGTTCTTAGATGAAGATATG +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHGRVNG*FLDEDM
Trigger: CATATCTTCATCTAAGAACCACCCATTTACCCGTCC...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCATCCACATTGGAAGCTaGATCCAAACCAACACAGTG +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPIHIGS*IQTNTV
Trigger: CACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGAT...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCGGAGAGCAAAAGACATaGAGATCCACATTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPGEQKT*RSTLEA
Trigger: AGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTCC...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR TCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGATACATGTTTACGGTATaGGAGCTGAAACTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRYMFTV*ELKLEG
Trigger: GCCTTCTAGTTTCAGCTCTCATACCGTAAACATGTA...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATTTCCTCTTTTTACTATaGCCTAAGCTGCACACACAT +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHFLFLL*PKLHTH
Trigger: ATGTGTGTGCAGCTTAGGTCATAGTAAAAAGAGGAA...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATTCCCTTCCTGACTCTTaGAATGAGAAGCATTCATTA +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHSLPDS*NEKHSL
Trigger: TAATGAATGCTTCTCATTTCAAGAGTCAGGAAGGGA...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAACCTCCTCTGAGATGTaGACTGTGGGAAAACATTTT +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRTSSEM*TVGKHF
Trigger: AAAATGTTTTCCCACAGTTCACATCTCAGAGGAGGT...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGATTCTTAATGAGGCTTTaGACCTTCTCCTGGGTTATC +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRFLMRL*TFSWVI
Trigger: GATAACCCAGGAGAAGGTGCAAAGCCTCATTAAGAA...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCGGTCTGCATTCCTACTaGTTCTGGGACTTAAATCTG +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPGLHSY*FWDLNL
Trigger: CAGATTTAAGTCCCAGAAGCAGTAGGAATGCAGACC...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp ACCAGTAGAGAACAATTGATGAGGGTACCGTTGCAGCAATTGGTATCATCAACATTTCTGAATCTGACTTaGTCGATGGTATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: TSREQLMRVPLQQLVSSTFLNLT*SMVFGK
Trigger: TTTGCCGAATACCATCGACCAAGTCAGATTCAGAAA...TGTTGATGATACCAATTGCTGCAACGGTACCCTCATCAATTGTTCTCTACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CCA 90 bp GAGAGCAAAAGACATGAAGATCCACATTGGAAGCTGAATCCAAACCAACACAGTAGGCAACTGCCCTTCTaGTTTTCTTCTTTGACTAAA +
Preference number: 4 (lower is better)
Translates to: ESKRHEDPHWKLNPNQHSRQLPF*FSSLTK
Trigger: TTTAGTCAAAGAAGAAAACCAGAAGGGCAGTTGCCT...ACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR CCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAAACTTACGCGATGTCTaGGAAGACTGTAATCCCATA +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRNLRDV*EDCNPI
Trigger: TATGGGATTACAGTCTTCCCAGACATCGCGTAAGTT...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAAACTGCTCCAGGCTATaGCAAACTGTTAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRNCSRL*QTVRNK
Trigger: CTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTT...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR TCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATATAAATACTATAAATTaGTCCAGGAGTGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHINTIN*SRSESP
Trigger: GGGAGACTCACTCCTGGATCAATTTATAGTATTTAT...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGACTGATTTGCACGAACTaGAACTTCTTGGTTAAGATG +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRLICTN*NFLVKM
Trigger: CATCTTAACCAAGAAGTTGCAGTTCGTGCAAATCAG...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATACAGGGTTAGGTTTCTaGAAGCTTTGTTTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHTGLGF*KLCFCQ
Trigger: TTGACAAAAACAAAGCTTGCAGAAACCTAACCCTGT...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGATTTCTGAATCTGACTTaGTCGATGGTATTCGGCAAA +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRFLNLT*SMVFGK
Trigger: TTTGCCGAATACCATCGACCAAGTCAGATTCAGAAA...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATCAGAGACAGGCACTTTaGTTCTATTCTAATACTTTC +
Preference number: 4 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHQRQAL*FYSNTF
Trigger: GAAAGTATTAGAATAGAACCAAAGTGCCTGTCTCTG...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp GAGAGCAAAAGACATGAAGATCCACATTGGAAGCTGAATCCAAACCAACACAGTAGGGACTTGTATGCATaGACTACTTTACTGCATATA +
Preference number: 4 (lower is better)
Translates to: ESKRHEDPHWKLNPNQHSRDLYA*TTLLHI
Trigger: TATATGCAGTAAAGTAGTCCATGCATACAAGTCCCT...ACTGTGTTGGTTTGGATTCAGCTTCCAATGTGGATCTTCATGTCTTTTGCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS-3UTR GCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCCTGATTTGCACGAACTaGAACTTCTTGGTTAAGATG +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPLICTN*NFLVKM
Trigger: CATCTTAACCAAGAAGTTGCAGTTCGTGCAAATCAG...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCTTGATTGTACACGCTaGAAATATAGTCAATTTGCA +
Preference number: 4 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHLDCTR*KYSQFA
Trigger: TGCAAATTGACTATATTTGCAGCGTGTACAATCAAG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAAGGGACTTGTATGCATaGACTACTTTACTGCATATA +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRRDLYA*TTLLHI
Trigger: TATATGCAGTAAAGTAGTCCATGCATACAAGTCCCT...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAATTATTTTGAGATCTTaGAGGAAGGGCCTTGTATTC +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRIILRS*RKGLVF
Trigger: GAATACAAGGCCCTTCCTCCAAGATCTCAAAATAAT...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CCA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGACATTCCTACTGCTTCTaGGACTTAAATCTGACATAT +
Preference number: 4 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRHSYCF*DLNLTY
Trigger: ATATGTCAGATTTAAGTCCCAGAAGCAGTAGGAATG...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR GCA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCACAGGGTTAGGTTTCTaGAAGCTTTGTTTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPTGLGF*KLCFCQ
Trigger: TTGACAAAAACAAAGCTTGCAGAAACCTAACCCTGT...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
3UTR CAA 72 bp CAGTTTTCTCTTCTAACGGTCCCAGGGAAAAGTAATTaGGGATCATTTCAGATACGCCAATTCTATCTATTA +
Preference number: 4 (lower is better)
Translates to: QFSLLTVPGKSN*GSFQIRQFYLL
Trigger: TAATAGATAGAATTGGCGTATCTGAAATGATCCCAAATTACTTTTCCCTGGGACCGTTAGAAGAGAAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS GCA 90 bp CCGCTCGTAGGAACCGGCGCAAGCGGCAGGTCCCTAGCCCAAAGCTaGAGGGCAGGGAGCGGCCGCAGCCACCGACCGCCGAGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PLVGTGASGRSLAQS*RAGSGRSHRPPSRH
Trigger: GTGCCGGCTCGGCGGTCGGTGGCTGCGGCCGCTCCCTGCCCTGCAGCTTTGGGCTAGGGACCTGCCGCTTGCGCCGGTTCCTACGAGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS GCA 90 bp AGGGAGCGGCCGCAGCCACCGACCGCCGAGCCGGCACAGCATTTCTaGACCACGGCGGAGCCCAGATCCCGGGCCTCACAATCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: RERPQPPTAEPAQHF*TTAEPRSRASQSSG
Trigger: TCCGCTGGATTGTGAGGCCCGGGATCTGGGCTCCGCCGTGGTGCAGAAATGCTGTGCCGGCTCGGCGGTCGGTGGCTGCGGCCGCTCCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS CCA 90 bp CGCGGCCAGGGCCTCGTACCAGCCGTTCGCATGTACTGCAGAGACTaGTGCCACTGCCCACACTGGGAGAGTGGGGCGCTTGGCGCCGCT +
Preference number: 5 (lower is better)
Translates to: RGQGLVPAVRMYCRD*CHCPHWESGALGAA
Trigger: AGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGCTGGTACGAGGCCCTGGCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS GCA 90 bp GGCCAGGGCCTCGTACCAGCCGTTCGCATGTACTGCAGAGACTGGTaGCACTGCCCACACTGGGAGAGTGGGGCGCTTGGCGCCGCTCGT +
Preference number: 5 (lower is better)
Translates to: GQGLVPAVRMYCRDW*HCPHWESGALGAAR
Trigger: ACGAGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGCTGGTACGAGGCCCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS GCA 90 bp CGGCGAAGACGCGGCCAGGGCCTCGTACCAGCCGTTCGCATGTACTaGAGAGACTGGTGCCACTGCCCACACTGGGAGAGTGGGGCGCTT +
Preference number: 5 (lower is better)
Translates to: RRRRGQGLVPAVRMY*RDWCHCPHWESGAL
Trigger: AAGCGCCCCACTCTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGCTGGTACGAGGCCCTGGCCGCGTCTTCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS CCA 90 bp CCAGCCGTTCGCATGTACTGCAGAGACTGGTGCCACTGCCCACACTaGGAGAGTGGGGCGCTTGGCGCCGCTCGTAGGAACCGGCGCAAG +
Preference number: 5 (lower is better)
Translates to: PAVRMYCRDWCHCPH*ESGALGAARRNRRK
Trigger: CTTGCGCCGGTTCCTACGAGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS TCA 90 bp CCACCTTGGCCAGGATGTAGTGCTGGTAGGCTGCCAAAGGCAGCGTaGCAGCACCCCGTAAGGCCACGGTGGAGAGCAGAATGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PPWPGCSAGRLPKAA*QHPVRPRWRAECCP
Trigger: GGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGGGTGCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTACATCCTGGCCAAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS TCA 90 bp GAGCCTTGGCCAGGATGTAGTGCTGGTAGGCTGCCAAAGGCAGCGTaGCAGCACCCCGTAAGGCCACGGTGGAGAGCAGAATGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: EPWPGCSAGRLPKAA*QHPVRPRWRAECCP
Trigger: GGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGGGTGCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTACATCCTGGCCAAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS TCA 90 bp CAACCTTGGCCAGGATGTAGTGCTGGTAGGCTGCCAAAGGCAGCGTaGCAGCACCCCGTAAGGCCACGGTGGAGAGCAGAATGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QPWPGCSAGRLPKAA*QHPVRPRWRAECCP
Trigger: GGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGGGTGCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTACATCCTGGCCAAGGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421792.2
CDS TCA 90 bp CTAGCTTGGCCAGGATGTAGTGCTGGTAGGCTGCCAAAGGCAGCGTaGCAGCACCCCGTAAGGCCACGGTGGAGAGCAGAATGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LAWPGCSAGRLPKAA*QHPVRPRWRAECCP
Trigger: GGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGGGTGCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTACATCCTGGCCAAGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR CAA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTGGGAGAGTGGGGCGCTaGGCGCCGCTCGTAGGAACC +
Preference number: 5 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTGRVGR*APLVGT
Trigger: GGTTCCTACGAGCGGCGCCAAGCGCCCCACTCTCCC...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CAA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAGGGAGAGTGGGGCGCTaGGCGCCGCTCGTAGGAACC +
Preference number: 5 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRGRVGR*APLVGT
Trigger: GGTTCCTACGAGCGGCGCCAAGCGCCCCACTCTCCC...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp AACGCAGCAGCAAATTCTGTGAAAGGCCCACGAAGCTGGAGCATAACCAGTAGAGGGAGAGTGGGGCGCTaGGCGCCGCTCGTAGGAACC +
Preference number: 5 (lower is better)
Translates to: NAAANSVKGPRSWSITSRGRVGR*APLVGT
Trigger: GGTTCCTACGAGCGGCGCCAAGCGCCCCACTCTCCC...TCTACTGGTTATGCTCCAGCTTCGTGGGCCTTTCACAGAATTTGCTGCTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATGGGAGAGTGGGGCGCTaGGCGCCGCTCGTAGGAACC +
Preference number: 5 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHGRVGR*APLVGT
Trigger: GGTTCCTACGAGCGGCGCCAAGCGCCCCACTCTCCC...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CAA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAGTCTTCTCCCCAAGTTaGGCTTTTCCCTCGAGGTTC +
Preference number: 5 (lower is better)
Translates to: EQGREATSSTMLGTCMHGVFSPS*AFPSRF
Trigger: GAACCTCGAGGGAAAAGCCAAACTTGGGGAGAAGAC...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGACCACCCCAACTGATTaGCACGAACTGCAACTTCTT +
Preference number: 5 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGTTPTD*HELQLL
Trigger: AAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGGT...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTTGGTATTCGGCAAAGTaGGCGAAATCCAGGAGAACG +
Preference number: 5 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTWYSAK*AKSRRT
Trigger: CGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCA...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTGGTATTCGGCAAAGTaGGCGAAATCCAGGAGAACG +
Preference number: 5 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSWYSAK*AKSRRT
Trigger: CGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAACCAACACAGTGGCTTaGAAAGGGTGGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: EQGREATSSTMLGTCMHGTNTVA*KGWQLS
Trigger: AGATAACTGCCACCCTTTCAAAGCCACTGTGTTGGT...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CAA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAACTCCAGCAGGGCATTaGGAGGCCATTTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRTPAGH*EAILNS
Trigger: ACTGTTTAAAATGGCCTCCAAATGCCCTGCTGGAGT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGATCTGCCTCTGCATCCTaGATTGTACACGCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: EQGREATSSTMLGTCMHGSASAS*IVHAAN
Trigger: ATTTGCAGCGTGTACAATCAAGGATGCAGAGGCAGA...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTCTTGGAGGAAGGGCCTaGTATTCTCAAACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTLGGRA*YSQTSC
Trigger: ACAGGAAGTTTGAGAATACAAGGCCCTTCCTCCAAG...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAACGAACTGCAACTTCTaGGTTAAGATGCCTGGCAAT +
Preference number: 5 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRTNCNF*VKMPGN
Trigger: ATTGCCAGGCATCTTAACCAAGAAGTTGCAGTTCGT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGACCACCCCAACTGATTaGCACGAACTGCAACTTCTT +
Preference number: 5 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLTTPTD*HELQLL
Trigger: AAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGGT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGACCAACACAGTGGCTTaGAAAGGGTGGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLTNTVA*KGWQLS
Trigger: AGATAACTGCCACCCTTTCAAAGCCACTGTGTTGGT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp ATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTCCACCAGTAACCAACACAGTGGCTTaGAAAGGGTGGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: IQVESGAVRSGNHRIPPVTNTVA*KGWQLS
Trigger: AGATAACTGCCACCCTTTCAAAGCCACTGTGTTGGT...TACTGGTGGAATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTTTGATGAGGGTACCGTaGCAGCAATTGGTATCATCA +
Preference number: 5 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSLMRVP*QQLVSS
Trigger: TGATGATACCAATTGCTGCAACGGTACCCTCATCAA...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTGTTTCTGAATCTGACTaGGTCGATGGTATTCGGCAA +
Preference number: 5 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSVSESD*VDGIRQ
Trigger: TTGCCGAATACCATCGACCAAGTCAGATTCAGAAAC...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGTTAAGATTTTCCACTTaGGGTGCTAGCAGTACACAG +
Preference number: 5 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGLRFST*GASSTQ
Trigger: CTGTGTACTGCTAGCACCCAAAGTGGAAAATCTTAA...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGACTCCAGCAGGGCATTaGGAGGCCATTTTAAACAGT +
Preference number: 5 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLTPAGH*EAILNS
Trigger: ACTGTTTAAAATGGCCTCCAAATGCCCTGCTGGAGT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGTCTGCCTCTGCATCCTaGATTGTACACGCTGCAAAT +
Preference number: 5 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLSASAS*IVHAAN
Trigger: ATTTGCAGCGTGTACAATCAAGGATGCAGAGGCAGA...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCTTGGAGGAAGGGCCTaGTATTCTCAAACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LSEQGREATSSTMLGTCMLGGRA*YSQTSC
Trigger: ACAGGAAGTTTGAGAATACAAGGCCCTTCCTCCAAG...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGCCAGGGAAAAGTAATTaGGGATCATTTCAGATACGC +
Preference number: 5 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGPGKSN*GSFQIR
Trigger: GCGTATCTGAAATGATCCCAAATTACTTTTCCCTGG...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp AACGCAGCAGCAAATTCTGTGAAAGGCCCACGAAGCTGGAGCATAACCAGTAGAGTACCGTTGCAGCAATaGGTATCATCAACACCGACA +
Preference number: 5 (lower is better)
Translates to: NAAANSVKGPRSWSITSRVPLQQ*VSSTPT
Trigger: TGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC...TCTACTGGTTATGCTCCAGCTTCGTGGGCCTTTCACAGAATTTGCTGCTGCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp GATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTTGGTATTCGGCAAAGTaGGCGAAATCCAGGAGAACG +
Preference number: 5 (lower is better)
Translates to: DGIRQSWRNPGERSSKFCWYSAK*AKSRRT
Trigger: CGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCA...ACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp ATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTCCACCAGTAGTTTCTGAATCTGACTaGGTCGATGGTATTCGGCAA +
Preference number: 5 (lower is better)
Translates to: IQVESGAVRSGNHRIPPVVSESD*VDGIRQ
Trigger: TTGCCGAATACCATCGACCAAGTCAGATTCAGAAAC...TACTGGTGGAATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGTACCATGTTAGGGACTaGTATGCATGGACTACTTTA +
Preference number: 5 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGYHVRD*YAWTTL
Trigger: TAAAGTAGTCCATGCATACAAGTCCCTAACATGGTA...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GAGCCTCAGCAACTGAGGGGATATAGGCAAGCCAGACAGCAAGACATCAAGGGGTTCAAGTTTGAAAGTTaGACAATGGGAGAGCAACAG +
Preference number: 5 (lower is better)
Translates to: EPQQLRGYRQARQQDIKGFKFES*TMGEQQ
Trigger: CTGTTGCTCTCCCATTGTCAAACTTTCAAACTTGAA...CCCCTTGATGTCTTGCTGTCTGGCTTGCCTATATCCCCTCAGTTGCTGAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGGTTCTTAATGAGGCTTaGCACCTTCTCCTGGGTTAT +
Preference number: 5 (lower is better)
Translates to: LSEQGREATSSTMLGTCMVLNEA*HLLLGY
Trigger: ATAACCCAGGAGAAGGTGCAAAGCCTCATTAAGAAC...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGCTGCCATTAAAAGTCTaGCTTCCACTGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLLPLKV*LPLFFR
Trigger: CCTGAAGAACAGTGGAAGCAAGACTTTTAATGGCAG...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTACCAACACAGTGGCTTaGAAAGGGTGGCAGTTATCT +
Preference number: 5 (lower is better)
Translates to: DGIRQSWRNPGERSSKFCTNTVA*KGWQLS
Trigger: AGATAACTGCCACCCTTTCAAAGCCACTGTGTTGGT...ACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp ATAGGCAGAATCCAAGTGGAGTCGGGTGCAGTGAGGTCAGGAAACCACAGAATTGTTTCTGAATCTGACTaGGTCGATGGTATTCGGCAA +
Preference number: 5 (lower is better)
Translates to: IGRIQVESGAVRSGNHRIVSESD*VDGIRQ
Trigger: TTGCCGAATACCATCGACCAAGTCAGATTCAGAAAC...AATTCTGTGGTTTCCTGACCTCACTGCACCCGACTCCACTTGGATTCTGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGATACCATGTTAGGGACTaGTATGCATGGACTACTTTA +
Preference number: 5 (lower is better)
Translates to: EQGREATSSTMLGTCMHGYHVRD*YAWTTL
Trigger: TAAAGTAGTCCATGCATACAAGTCCCTAACATGGTA...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CAA 90 bp CCCAGGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTGGGTTATGGATAGATTaGAGCAAGGAGGCAAATTTA +
Preference number: 5 (lower is better)
Translates to: PRCACPPDTQSCKTAIKSGLWID*SKEANL
Trigger: TAAATTTGCCTCCTTGCTCAAATCTATCCATAACCC...ACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGAATAGCACGTTATTTTTaGCGTCTCAGCAAAAGTGAC +
Preference number: 5 (lower is better)
Translates to: EQGREATSSTMLGTCMHGIARYF*RLSKSD
Trigger: GTCACTTTTGCTGAGACGCAAAAAATAACGTGCTAT...TCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp ATGGTATTCGGCAAAGTTGGCGAAATCCAGGAGAACGCAGCAGCAAATTCTGTGTTGATGAGGGTACCGTaGCAGCAATTGGTATCATCA +
Preference number: 5 (lower is better)
Translates to: MVFGKVGEIQENAAANSVLMRVP*QQLVSS
Trigger: TGATGATACCAATTGCTGCAACGGTACCCTCATCAA...CACAGAATTTGCTGCTGCGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp GGTGTGCCTGCCCACCAGACACCCAATCTTGCAAGACTGCCATTAAAAGTCTTGAAATACCTGCCATACTaGATATCTCAACCAGAGCTA +
Preference number: 5 (lower is better)
Translates to: GVPAHQTPNLARLPLKVLKYLPY*ISQPEL
Trigger: TAGCTCTGGTTGAGATATCAAGTATGGCAGGTATTT...CAAGACTTTTAATGGCAGTCTTGCAAGATTGGGTGTCTGGTGGGCAGGCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp AGCACTGGCAGCCAGCCTTGGTATGTAACAAACCGCACTGCTCATGCACCTAGAAGGTTTCTGCAAGCTTaGTTTTTGTCAACAGAACAA +
Preference number: 5 (lower is better)
Translates to: STGSQPWYVTNRTAHAPRRFLQA*FLSTEQ
Trigger: TTGTTCTGTTGACAAAAACAAAGCTTGCAGAAACCT...TCTAGGTGCATGAGCAGTGCGGTTTGTTACATACCAAGGCTGGCTGCCAGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTAATTATTTTGAGATCTaGGAGGAAGGGCCTTGTATT +
Preference number: 5 (lower is better)
Translates to: AGPGGNIIYHVRDLYAWTNYFEI*EEGPCI
Trigger: AATACAAGGCCCTTCCTCCAAGATCTCAAAATAATT...AGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATGTCTTCTCCCCAAGTTaGGCTTTTCCCTCGAGGTTC +
Preference number: 5 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHVFSPS*AFPSRF
Trigger: GAACCTCGAGGGAAAAGCCAAACTTGGGGAGAAGAC...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp CTTTCTGAGCAGGGCCGGGAGGCAACATCATCTACCATGTTAGGGACTTGTATGAATTATTTTGAGATCTaGGAGGAAGGGCCTTGTATT +
Preference number: 5 (lower is better)
Translates to: LSEQGREATSSTMLGTCMNYFEI*EEGPCI
Trigger: AATACAAGGCCCTTCCTCCAAGATCTCAAAATAATT...CATACAAGTCCCTAACATGGTAGATGATGTTGCCTCCCGGCCCTGCTCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATGTACCGTTGCAGCAATaGGTATCATCAACACCGACA +
Preference number: 5 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHVPLQQ*VSSTPT
Trigger: TGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp TGTAGAGCACAAATCTCCACTATTAACAAATTGATGACGCCAACAGAGATAGGCTGGTATTCGGCAAAGTaGGCGAAATCCAGGAGAACG +
Preference number: 5 (lower is better)
Translates to: CRAQISTINKLMTPTEIGWYSAK*AKSRRT
Trigger: CGTTCTCCTGGATTTCGCCAACTTTGCCGAATACCA...GCCTATCTCTGTTGGCGTCATCAATTTGTTAATAGTGGAGATTTGTGCTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp CAATTGATGAGGGTACCGTTGCAGCAATTGGTATCATCAACACCGACATTGCACTTAAGATTTTCCACTTaGGGTGCTAGCAGTACACAG +
Preference number: 5 (lower is better)
Translates to: QLMRVPLQQLVSSTPTLHLRFST*GASSTQ
Trigger: CTGTGTACTGCTAGCACCCAAAGTGGAAAATCTTAA...GTGCAATGTCGGTGTTGATGATACCAATTGCTGCAACGGTACCCTCATCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449739.6
CDS CCA 90 bp AACTGCAACTTCTTGGTTAAGATGCCTGGCAATAGTTTTTATTTCTaGCTGCAAATTTTCCACCTAGCTTGGCCAGGATGTAGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: NCNFLVKMPGNSFYF*LQIFHLAWPGCSAG
Trigger: ACCAGCACTACATCCTGGCCAAGCTAGGTGGAAAATTTGCAGCCAGAAATAAAAACTATTGCCAGGCATCTTAACCAAGAAGTTGCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR CAA 90 bp TGTAGAGCACAAATCTCCACTATTAACAAATTGATGACGCCAACAGAGATAGGCACCACCCCAACTGATTaGCACGAACTGCAACTTCTT +
Preference number: 5 (lower is better)
Translates to: CRAQISTINKLMTPTEIGTTPTD*HELQLL
Trigger: AAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGGT...GCCTATCTCTGTTGGCGTCATCAATTTGTTAATAGTGGAGATTTGTGCTCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510031.1
CDS-3UTR CAA 90 bp TGTAGAGCACAAATCTCCACTATTAACAAATTGATGACGCCAACAGAGATAGGCGTACCGTTGCAGCAATaGGTATCATCAACACCGACA +
Preference number: 5 (lower is better)
Translates to: CRAQISTINKLMTPTEIGVPLQQ*VSSTPT
Trigger: TGTCGGTGTTGATGATACCAATTGCTGCAACGGTAC...GCCTATCTCTGTTGGCGTCATCAATTTGTTAATAGTGGAGATTTGTGCTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449739.6
ENST00000510031.1
CDS-3UTR CAA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATGTTTCTGAATCTGACTaGGTCGATGGTATTCGGCAA +
Preference number: 5 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHVSESD*VDGIRQ
Trigger: TTGCCGAATACCATCGACCAAGTCAGATTCAGAAAC...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CAA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATCTGCCATTAAAAGTCTaGCTTCCACTGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHLPLKV*LPLFFR
Trigger: CCTGAAGAACAGTGGAAGCAAGACTTTTAATGGCAG...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGATTAAGATTTTCCACTTaGGGTGCTAGCAGTACACAG +
Preference number: 5 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRLRFST*GASSTQ
Trigger: CTGTGTACTGCTAGCACCCAAAGTGGAAAATCTTAA...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp GGCAACATCATCTACCATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATAAATACCTGCCATACTaGATATCTCAACCAGAGCTA +
Preference number: 5 (lower is better)
Translates to: GNIIYHVRDLYAWTTLLHKYLPY*ISQPEL
Trigger: TAGCTCTGGTTGAGATATCAAGTATGGCAGGTATTT...ATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACATGGTAGATGATGTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000449739.6
ENST00000507544.3
CDS-3UTR CAA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCAAGGCAGAGTACCATTaGTTTCACTTCTGTTGGGAG +
Preference number: 5 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPKAEYH*FHFCWE
Trigger: CTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTT...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp AAACTAGAAGGCAGAGTACCATTTGTTTCACTTCTGTTGGGAGGTGACTCACATATAGCACGTTATTTTTaGCGTCTCAGCAAAAGTGAC +
Preference number: 5 (lower is better)
Translates to: KLEGRVPFVSLLLGGDSHIARYF*RLSKSD
Trigger: GTCACTTTTGCTGAGACGCAAAAAATAACGTGCTAT...ATGTGAGTCACCTCCCAACAGAAGTGAAACAAATGGTACTCTGCCTTCTAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGACCAGGGAAAAGTAATTaGGGATCATTTCAGATACGC +
Preference number: 5 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRPGKSN*GSFQIR
Trigger: GCGTATCTGAAATGATCCCAAATTACTTTTCCCTGG...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp CTTCATTCAGGTTCTGGAACTGCTCCAGGCTATGACAAACTGTTAGAAATAAGAGGGTTATGGATAGATTaGAGCAAGGAGGCAAATTTA +
Preference number: 5 (lower is better)
Translates to: LHSGSGTAPGYDKLLEIRGLWID*SKEANL
Trigger: TAAATTTGCCTCCTTGCTCAAATCTATCCATAACCC...TCTTATTTCTAACAGTTTGTCATAGCCTGGAGCAGTTCCAGAACCTGAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS-3UTR CAA 90 bp ATGTTAGGGACTTGTATGCATGGACTACTTTACTGCATATATTTCAAGTTGCCCAGGTTTCTGCAAGCTTaGTTTTTGTCAACAGAACAA +
Preference number: 5 (lower is better)
Translates to: MLGTCMHGLLYCIYFKLPRFLQA*FLSTEQ
Trigger: TTGTTCTGTTGACAAAAACAAAGCTTGCAGAAACCT...GGGCAACTTGAAATATATGCAGTAAAGTAGTCCATGCATACAAGTCCCTAACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295890.8
ENST00000507544.3
CDS GCA 72 bp CAGCACCCCGTAAGGCCACGGTGGAGAGCAGAATGCTaGCCCACCAGGGCAGGCCCGTGGCGGCGTGCACGC +
Preference number: 6 (lower is better)
Translates to: QHPVRPRWRAEC*PTRAGPWRRAR
Trigger: GCGTGCACGCCGCCACGGGCCTGCCCTGGTGGGGCAGCATTCTGCTCTCCACCGTGGCCTTACGGGGTGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS CAA 90 bp ACTGCAGAGACTGGTGCCACTGCCCACACTGGGAGAGTGGGGCGCTaGGCGCCGCTCGTAGGAACCGGCGCAAGCGGCAGGTCCCTAGCC +
Preference number: 6 (lower is better)
Translates to: TAETGATAHTGRVGR*APLVGTGASGRSLA
Trigger: GGCTAGGGACCTGCCGCTTGCGCCGGTTCCTACGAGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS CCA 72 bp TGGAGAGCAGAATGCTGCCCCACCAGGGCAGGCCCGTaGCGGCGTGCACGCCGAGCAGTACTTCCTCCGCAA +
Preference number: 6 (lower is better)
Translates to: WRAECCPTRAGP*RRARRAVLPPQ
Trigger: TTGCGGAGGAAGTACTGCTCGGCGTGCACGCCGCCACGGGCCTGCCCTGGTGGGGCAGCATTCTGCTCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS GCA 72 bp CGCGGCCAGGGCCTCGTACCAGCCGTTCGCATGTACTaGAGAGACTGGTGCCACTGCCCACACTGGGAGAGT +
Preference number: 6 (lower is better)
Translates to: RGQGLVPAVRMY*RDWCHCPHWES
Trigger: ACTCTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGCTGGTACGAGGCCCTGGCCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS CCA 72 bp CGCATGTACTGCAGAGACTGGTGCCACTGCCCACACTaGGAGAGTGGGGCGCTTGGCGCCGCTCGTAGGAAC +
Preference number: 6 (lower is better)
Translates to: RMYCRDWCHCPH*ESGALGAARRN
Trigger: GTTCCTACGAGCGGCGCCAAGCGCCCCACTCTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACATGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS CCA 72 bp GGCCTCGTACCAGCCGTTCGCATGTACTGCAGAGACTaGTGCCACTGCCCACACTGGGAGAGTGGGGCGCTT +
Preference number: 6 (lower is better)
Translates to: GLVPAVRMYCRD*CHCPHWESGAL
Trigger: AAGCGCCCCACTCTCCCAGTGTGGGCAGTGGCACCAGTCTCTGCAGTACATGCGAACGGCTGGTACGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS TCA 72 bp CCAGGATGTAGTGCTGGTAGGCTGCCAAAGGCAGCGTaGCAGCACCCCGTAAGGCCACGGTGGAGAGCAGAA +
Preference number: 6 (lower is better)
Translates to: PGCSAGRLPKAA*QHPVRPRWRAE
Trigger: TTCTGCTCTCCACCGTGGCCTTACGGGGTGCTGTCACGCTGCCTTTGGCAGCCTACCAGCACTACATCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295890.8
ENST00000421792.2
ENST00000449739.6
ENST00000507544.3
ENST00000510031.1
CDS TCA 72 bp TCACAATCCAGCGGACATACACCGGCCAGCCAAGGCTaGTACGCGCACGCGCCAGCAACAGCGGGCATAAAG +
Preference number: 6 (lower is better)
Translates to: SQSSGHTPASQG*YAHAPATAGIK
Trigger: CTTTATGCCCGCTGTTGCTGGCGCGTGCGCGTATCAGCCTTGGCTGGCCGGTGTATGTCCGCTGGATTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421792.2
CDS GCA 72 bp GAGCCTGGCATCTCTTTTGGACCACCCCAACTGATTTaGACGAACTGCAACTTCTTGGTTAAGATGCCTGGC +
Preference number: 6 (lower is better)
Translates to: EPGISFGPPQLI*TNCNFLVKMPG
Trigger: GCCAGGCATCTTAACCAAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGGTCCAAAAGAGATGCCAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000507544.3
ENST00000510031.1
CDS TCA 72 bp GGAAACCACAGAATTCCACCAGTAGCTAACTGTTCCTaGACAGAAAAACCTGCTTCTGAATGTGCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: GNHRIPPVANCS*TEKPASECAAP
Trigger: GGGGGCAGCACATTCAGAAGCAGGTTTTTCTGTTCAGGAACAGTTAGCTACTGGTGGAATTCTGTGGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507544.3
CDS CAA 72 bp GGACCACCCCAACTGATTTGCACGAACTGCAACTTCTaGGTTAAGATGCCTGGCAATAGTTTTTATTTCTGG +
Preference number: 6 (lower is better)
Translates to: GPPQLICTNCNF*VKMPGNSFYFW
Trigger: CCAGAAATAAAAACTATTGCCAGGCATCTTAACCAAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000507544.3
ENST00000510031.1
CDS GCA 72 bp ATCTCTTTTGGACCACCCCAACTGATTTGCACGAACTaGAACTTCTTGGTTAAGATGCCTGGCAATAGTTTT +
Preference number: 6 (lower is better)
Translates to: ISFGPPQLICTN*NFLVKMPGNSF
Trigger: AAAACTATTGCCAGGCATCTTAACCAAGAAGTTGCAGTTCGTGCAAATCAGTTGGGGTGGTCCAAAAGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295890.8
ENST00000507544.3
ENST00000510031.1