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Pregenerated sensors for COMMD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000169019

Ensembl transcript IDs: ENST00000381571.6

Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAACGCAGTATTCACTCTaGCATATAAGTTGGAGCAAT +
Preference number: 2 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSETQYSL*HISWSN
Trigger: ATTGCTCCAACTTATATGGCAGAGTGAATACTGCGT...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR GCA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAATTCCGGCTCCATCCCTaGGCGAAGCTGGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSEFRLHP*AKLGLG
Trigger: CCCAAGCCCCAGCTTCGCGCAGGGATGGAGCCGGAA...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR CCA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAATCCCTGCGCGAAGCTaGGGCTTGGGTCACGTGTCA +
Preference number: 4 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSEIPARS*GLGHVS
Trigger: TGACACGTGACCCAAGCCCCAGCTTCGCGCAGGGAT...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR GCA 90 bp ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCGGCCGGCAGCTTCTaGAGCCGCCACAAGGGCGTC +
Preference number: 4 (lower is better)
Translates to: IFIISILLLSQPGATVKTSAGSF*SRHKGV
Trigger: GACGCCCTTGTGGCGGCTGCAGAAGCTGCCGGCCGA...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR CCA 90 bp ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACACGCGAAGCTGGGGCTTaGGTCACGTGTCAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: IFIISILLLSQPGATVKTREAGA*VTCQGW
Trigger: CCAGCCTTGACACGTGACCCAAGCCCCAGCTTCGCG...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR TCA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACCATCAATTATTTTGTaGAGAAGCTGCGGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSEPSIIL*RSCGPS
Trigger: GCTGGGCCCGCAGCTTCTTCACAAAATAATTGATGG...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR CCA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAGCTGCTTTCTCAGCCTaGTGCAACAGTCAAGACATC +
Preference number: 4 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSEAAFSA*CNSQDI
Trigger: GATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGC...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR GCA 90 bp TCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACACGCAGTATTCATCCAGTTATTTCAACTaGAGGACCACCTTATTCGCT +
Preference number: 4 (lower is better)
Translates to: SAWCNSQDITRFLNTQYSSSYFN*RTTLFA
Trigger: AGCGAATAAGGTGGTCCTGCAGTTGAAATAACTGGA...TGAATACTGCGTGTTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR GCA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAAGTGCAAGCTTTACCTaGCAATCAAAATCCTGTAGC +
Preference number: 4 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSESASFT*QSKSCS
Trigger: GCTACAGGATTTTGATTGGCAGGTAAAGCTTGCACT...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR GCA 90 bp TCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACACGCAGTATTCAGACTGTATTAGATTCTaGAGCTCCTCTCTACTCATT +
Preference number: 4 (lower is better)
Translates to: SAWCNSQDITRFLNTQYSDCIRF*SSSLLI
Trigger: AATGAGTAGAGAGGAGCTGCAGAATCTAATACAGTC...TGAATACTGCGTGTTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR GCA 90 bp ATCACAAGGTTTCTGAACACGCAGTATTCACTCTGCCATATAAGTTGGAGCAATGCTTTCTCAGCCTGGTaGAACAGTCAAGACATCACA +
Preference number: 4 (lower is better)
Translates to: ITRFLNTQYSLCHISWSNAFSAW*NSQDIT
Trigger: TGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGC...ATTGCTCCAACTTATATGGCAGAGTGAATACTGCGTGTTCAGAAACCTTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR TCA 90 bp TCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACACGCAGTATTCAAGACATGGAATCTCCTaGGTTATATATGCAGCTTAT +
Preference number: 4 (lower is better)
Translates to: SAWCNSQDITRFLNTQYSRHGIS*VIYAAY
Trigger: ATAAGCTGCATATATAACTCAGGAGATTCCATGTCT...TGAATACTGCGTGTTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR TCA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACTTTCCTCTGAAATATaGGAAAGACATGGAATCTCC +
Preference number: 4 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSELSSEI*ERHGIS
Trigger: GGAGATTCCATGTCTTTCTCATATTTCAGAGGAAAG...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR GCA 90 bp ATCACAAGGTTTCTGAACACGCAGTATTCACTCTGCCATATAAGTTGGAGCAATCTTGTCACTGGAAAGTaGAAGCTTTACCTGCCAATC +
Preference number: 4 (lower is better)
Translates to: ITRFLNTQYSLCHISWSNLVTGK*KLYLPI
Trigger: GATTGGCAGGTAAAGCTTGCACTTTCCAGTGACAAG...ATTGCTCCAACTTATATGGCAGAGTGAATACTGCGTGTTCAGAAACCTTGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR TCA 90 bp ATCACAAGGTTTCTGAACACGCAGTATTCACTCTGCCATATAAGTTGGAGCAATAGCAACTATTTCTCTTaGCAGAGCCTGTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: ITRFLNTQYSLCHISWSNSNYFS*QSLFDF
Trigger: GAAATCAAACAGGCTCTGTCAAGAGAAATAGTTGCT...ATTGCTCCAACTTATATGGCAGAGTGAATACTGCGTGTTCAGAAACCTTGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR GCA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAATATCTTCTAAAACGTaGATCCATTCTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSEISSKT*IHSSDS
Trigger: GGAATCAGAAGAATGGATGCACGTTTTAGAAGATAT...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR TCA 90 bp ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACAGTGCATCCATTCTTCTaGTTCCCAAACAGTGTGATA +
Preference number: 4 (lower is better)
Translates to: IFIISILLLSQPGATVKTVHPFF*FPNSVI
Trigger: TATCACACTGTTTGGGAATCAGAAGAATGGATGCAC...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR TCA 90 bp ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACAACATCACAAGGTTTCTaGACACGCAGTATTCACTCT +
Preference number: 4 (lower is better)
Translates to: IFIISILLLSQPGATVKTTSQGF*TRSIHS
Trigger: AGAGTGAATACTGCGTGTTCAGAAACCTTGTGATGT...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR CCA 90 bp ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACACAGCAATCTTGTCACTaGAAAGTGCAAGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: IFIISILLLSQPGATVKTQQSCH*KVQALP
Trigger: AGGTAAAGCTTGCACTTTCCAGTGACAAGATTGCTG...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS GCA 90 bp CTTCTGCAGCCGCCACAAGGGCGTCCCCTCTTCCGGCTCCATCCCTaGGCGAAGCTGGGGCTTGGGTCACGTGTCAAGGCTGGCCGCTTG +
Preference number: 5 (lower is better)
Translates to: LLQPPQGRPLFRLHP*AKLGLGSRVKAGRL
Trigger: CAAGCGGCCAGCCTTGACACGTGACCCAAGCCCCAGCTTCGCGCAGGGATGGAGCCGGAAGAGGGGACGCCCTTGTGGCGGCTGCAGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR CAA 90 bp TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAGCGCGAAGCTGGGGCTaGGGTCACGTGTCAAGGCTG +
Preference number: 5 (lower is better)
Translates to: YCCFLSLVQQSRHHKVSEARSWG*GHVSRL
Trigger: CAGCCTTGACACGTGACCCAAGCCCCAGCTTCGCGC...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS-3UTR CAA 90 bp TCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACACGCAGTATTCATGCTCAGAATGCTTGTaGTTAAAGTTAACTGAGGTT +
Preference number: 5 (lower is better)
Translates to: SAWCNSQDITRFLNTQYSCSECL*LKLTEV
Trigger: AACCTCAGTTAACTTTAACAACAAGCATTCTGAGCA...TGAATACTGCGTGTTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381571.6
CDS GCA 72 bp CCGCCACAAGGGCGTCCCCTCTTCCGGCTCCATCCCTaGGCGAAGCTGGGGCTTGGGTCACGTGTCAAGGCT +
Preference number: 6 (lower is better)
Translates to: PPQGRPLFRLHP*AKLGLGSRVKA
Trigger: AGCCTTGACACGTGACCCAAGCCCCAGCTTCGCGCAGGGATGGAGCCGGAAGAGGGGACGCCCTTGTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381571.6