Pregenerated sensors for COMMD8 (Homo sapiens)
Ensembl gene IDs: ENSG00000169019Ensembl transcript IDs: ENST00000381571.6
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAACGCAGTATTCACTCTaGCATATAAGTTGGAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: YCCFLSLVQQSRHHKVSETQYSL*HISWSN Trigger: ATTGCTCCAACTTATATGGCAGAGTGAATACTGCGT...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR GCA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAATTCCGGCTCCATCCCTaGGCGAAGCTGGGGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: YCCFLSLVQQSRHHKVSEFRLHP*AKLGLG Trigger: CCCAAGCCCCAGCTTCGCGCAGGGATGGAGCCGGAA...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR CCA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAATCCCTGCGCGAAGCTaGGGCTTGGGTCACGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: YCCFLSLVQQSRHHKVSEIPARS*GLGHVS Trigger: TGACACGTGACCCAAGCCCCAGCTTCGCGCAGGGAT...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR GCA 90 bp | ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCGGCCGGCAGCTTCTaGAGCCGCCACAAGGGCGTC | + |
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Preference number: 4 (lower is better) Translates to: IFIISILLLSQPGATVKTSAGSF*SRHKGV Trigger: GACGCCCTTGTGGCGGCTGCAGAAGCTGCCGGCCGA...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR CCA 90 bp | ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACACGCGAAGCTGGGGCTTaGGTCACGTGTCAAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IFIISILLLSQPGATVKTREAGA*VTCQGW Trigger: CCAGCCTTGACACGTGACCCAAGCCCCAGCTTCGCG...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR TCA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACCATCAATTATTTTGTaGAGAAGCTGCGGGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YCCFLSLVQQSRHHKVSEPSIIL*RSCGPS Trigger: GCTGGGCCCGCAGCTTCTTCACAAAATAATTGATGG...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR CCA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAGCTGCTTTCTCAGCCTaGTGCAACAGTCAAGACATC | + |
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Preference number: 4 (lower is better) Translates to: YCCFLSLVQQSRHHKVSEAAFSA*CNSQDI Trigger: GATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGC...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR GCA 90 bp | TCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACACGCAGTATTCATCCAGTTATTTCAACTaGAGGACCACCTTATTCGCT | + |
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Preference number: 4 (lower is better) Translates to: SAWCNSQDITRFLNTQYSSSYFN*RTTLFA Trigger: AGCGAATAAGGTGGTCCTGCAGTTGAAATAACTGGA...TGAATACTGCGTGTTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR GCA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAAGTGCAAGCTTTACCTaGCAATCAAAATCCTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: YCCFLSLVQQSRHHKVSESASFT*QSKSCS Trigger: GCTACAGGATTTTGATTGGCAGGTAAAGCTTGCACT...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR GCA 90 bp | TCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACACGCAGTATTCAGACTGTATTAGATTCTaGAGCTCCTCTCTACTCATT | + |
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Preference number: 4 (lower is better) Translates to: SAWCNSQDITRFLNTQYSDCIRF*SSSLLI Trigger: AATGAGTAGAGAGGAGCTGCAGAATCTAATACAGTC...TGAATACTGCGTGTTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR GCA 90 bp | ATCACAAGGTTTCTGAACACGCAGTATTCACTCTGCCATATAAGTTGGAGCAATGCTTTCTCAGCCTGGTaGAACAGTCAAGACATCACA | + |
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Preference number: 4 (lower is better) Translates to: ITRFLNTQYSLCHISWSNAFSAW*NSQDIT Trigger: TGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGC...ATTGCTCCAACTTATATGGCAGAGTGAATACTGCGTGTTCAGAAACCTTGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR TCA 90 bp | TCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACACGCAGTATTCAAGACATGGAATCTCCTaGGTTATATATGCAGCTTAT | + |
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Preference number: 4 (lower is better) Translates to: SAWCNSQDITRFLNTQYSRHGIS*VIYAAY Trigger: ATAAGCTGCATATATAACTCAGGAGATTCCATGTCT...TGAATACTGCGTGTTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR TCA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACTTTCCTCTGAAATATaGGAAAGACATGGAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: YCCFLSLVQQSRHHKVSELSSEI*ERHGIS Trigger: GGAGATTCCATGTCTTTCTCATATTTCAGAGGAAAG...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR GCA 90 bp | ATCACAAGGTTTCTGAACACGCAGTATTCACTCTGCCATATAAGTTGGAGCAATCTTGTCACTGGAAAGTaGAAGCTTTACCTGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: ITRFLNTQYSLCHISWSNLVTGK*KLYLPI Trigger: GATTGGCAGGTAAAGCTTGCACTTTCCAGTGACAAG...ATTGCTCCAACTTATATGGCAGAGTGAATACTGCGTGTTCAGAAACCTTGTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR TCA 90 bp | ATCACAAGGTTTCTGAACACGCAGTATTCACTCTGCCATATAAGTTGGAGCAATAGCAACTATTTCTCTTaGCAGAGCCTGTTTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: ITRFLNTQYSLCHISWSNSNYFS*QSLFDF Trigger: GAAATCAAACAGGCTCTGTCAAGAGAAATAGTTGCT...ATTGCTCCAACTTATATGGCAGAGTGAATACTGCGTGTTCAGAAACCTTGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR GCA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAATATCTTCTAAAACGTaGATCCATTCTTCTGATTCC | + |
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Preference number: 4 (lower is better) Translates to: YCCFLSLVQQSRHHKVSEISSKT*IHSSDS Trigger: GGAATCAGAAGAATGGATGCACGTTTTAGAAGATAT...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR TCA 90 bp | ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACAGTGCATCCATTCTTCTaGTTCCCAAACAGTGTGATA | + |
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Preference number: 4 (lower is better) Translates to: IFIISILLLSQPGATVKTVHPFF*FPNSVI Trigger: TATCACACTGTTTGGGAATCAGAAGAATGGATGCAC...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR TCA 90 bp | ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACAACATCACAAGGTTTCTaGACACGCAGTATTCACTCT | + |
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Preference number: 4 (lower is better) Translates to: IFIISILLLSQPGATVKTTSQGF*TRSIHS Trigger: AGAGTGAATACTGCGTGTTCAGAAACCTTGTGATGT...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR CCA 90 bp | ATCTTTATAATATCAATATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACACAGCAATCTTGTCACTaGAAAGTGCAAGCTTTACCT | + |
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Preference number: 4 (lower is better) Translates to: IFIISILLLSQPGATVKTQQSCH*KVQALP Trigger: AGGTAAAGCTTGCACTTTCCAGTGACAAGATTGCTG...TGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATATTGATATTATAAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS GCA 90 bp | CTTCTGCAGCCGCCACAAGGGCGTCCCCTCTTCCGGCTCCATCCCTaGGCGAAGCTGGGGCTTGGGTCACGTGTCAAGGCTGGCCGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LLQPPQGRPLFRLHP*AKLGLGSRVKAGRL Trigger: CAAGCGGCCAGCCTTGACACGTGACCCAAGCCCCAGCTTCGCGCAGGGATGGAGCCGGAAGAGGGGACGCCCTTGTGGCGGCTGCAGAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR CAA 90 bp | TATTGCTGCTTTCTCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAAGCGCGAAGCTGGGGCTaGGGTCACGTGTCAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: YCCFLSLVQQSRHHKVSEARSWG*GHVSRL Trigger: CAGCCTTGACACGTGACCCAAGCCCCAGCTTCGCGC...TTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGAGAAAGCAGCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS-3UTR CAA 90 bp | TCAGCCTGGTGCAACAGTCAAGACATCACAAGGTTTCTGAACACGCAGTATTCATGCTCAGAATGCTTGTaGTTAAAGTTAACTGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: SAWCNSQDITRFLNTQYSCSECL*LKLTEV Trigger: AACCTCAGTTAACTTTAACAACAAGCATTCTGAGCA...TGAATACTGCGTGTTCAGAAACCTTGTGATGTCTTGACTGTTGCACCAGGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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| CDS GCA 72 bp | CCGCCACAAGGGCGTCCCCTCTTCCGGCTCCATCCCTaGGCGAAGCTGGGGCTTGGGTCACGTGTCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PPQGRPLFRLHP*AKLGLGSRVKA Trigger: AGCCTTGACACGTGACCCAAGCCCCAGCTTCGCGCAGGGATGGAGCCGGAAGAGGGGACGCCCTTGTGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381571.6 |
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