RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for COLEC11 (Homo sapiens)

Ensembl gene IDs: ENSG00000118004

Ensembl transcript IDs: ENST00000236693.11, ENST00000349077.9, ENST00000382062.6, ENST00000402794.4, ENST00000402922.2, ENST00000403096.7, ENST00000404205.5, ENST00000416132.5, ENST00000418971.6, ENST00000419002.6, ENST00000438814.5, ENST00000460971.5, ENST00000487365.5

Found 428 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACGGGCCAGGCCGGCTTGCGCCAGGTATGCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCATGCTCAGCGTGCCCCCGCGGCCCT +
Preference number: 1 (lower is better)
Translates to: HGPGRLAPGMRPSGH*QPRPWACSACPRGP
Trigger: AGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 90 bp CCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTTGGGCATaGTCAGCGTGCCCCCGCGGCCCTGGCAGGACAGCTGGGCGTCCG +
Preference number: 1 (lower is better)
Translates to: PGMRPSGHWQPRPWA*SACPRGPGRTAGRP
Trigger: CGGACGCCCAGCTGTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CCA 90 bp CTTGCGCCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAGGACAGCTGGG +
Preference number: 1 (lower is better)
Translates to: LAPGMRPSGHWQPRP*ACSACPRGPGRTAG
Trigger: CCCAGCTGTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 90 bp GTTGATGCCGATGAAGACACGGGCCAGGCCGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGCAGCCTCGTCCTTGGGCATGCTCAG +
Preference number: 1 (lower is better)
Translates to: VDADEDTGQAGLRQV*GHQAIGSLVLGHAQ
Trigger: CTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTGTCTTCATCGGCATCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 90 bp CGCTGGTCAGCTGAGAGACCTGGTTGTCCATCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCACATGGGAGGCCTCCAGGTCCTTCTG +
Preference number: 1 (lower is better)
Translates to: RWSAERPGCPSPRWP*AAGCTHMGGLQVLL
Trigger: CAGAAGGACCTGGAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACAACCAGGTCTCTCAGCTGACCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 90 bp TTCTCCAGGTCGTTGATGCCGATGAAGACACGGGCCAGGCCGGCTTaGGCCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTTG +
Preference number: 1 (lower is better)
Translates to: FSRSLMPMKTRARPA*ARYAAIRPLAASSL
Trigger: CAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR TCA 90 bp CCTCCTCGTCGTAGGCATTGTTGGGCTCACCGCTGCGCCACTTGTTaGAGGTCCGCATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCT +
Preference number: 1 (lower is better)
Translates to: PPRRRHCWAHRCATC*RSAWGSGQSTRRRP
Trigger: AGGGCGCCTTCGTGTACTCTGACCACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CCA 90 bp TTGGGCTCACCGCTGCGCCACTTGTTGAAGGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGTTGATG +
Preference number: 1 (lower is better)
Translates to: LGSPLRHLLKVRMGE*SEYTKAPSFSRSLM
Trigger: CATCAACGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGAGCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR TCA 90 bp ACACCGGCGACAGCATTCTTGATGAACTTGAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATCTCCCCGATGGCCTTGCGCAGCTGG +
Preference number: 1 (lower is better)
Translates to: TPATAFLMNLSSLVS*ETWLSISPMALRSW
Trigger: CCAGCTGCGCAAGGCCATCGGGGAGATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR TCA 90 bp AGCCCCAGCCTGAGGCTCACATGTTCTCCTTGTCAAACTCACACATaGAGTACATGGTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCG +
Preference number: 1 (lower is better)
Translates to: SPSLRLTCSPCQTHT*STWWCGRPRRSSRP
Trigger: CGGGCGGCTGGAACGACGTGGCCTGCCACACCACCATGTACTTCATGTGTGAGTTTGACAAGGAGAACATGTGAGCCTCAGGCTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR TCA 90 bp AAGCATAGGCCATTTTCTCAGTTTAGACAACAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCA +
Preference number: 1 (lower is better)
Translates to: KHRPFSQFRQQPSTQ*ASTLHRGTAPWLAP
Trigger: TGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACTGAGAAAATGGCCTATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR CAA 90 bp ACACGGGCCAGGCCGGCTTGCGCCAGGTATGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGCATGCTCAGCGTGCCCCCGCGGCCC +
Preference number: 2 (lower is better)
Translates to: TRARPACARYAAIRP*AASSLGMLSVPPRP
Trigger: GGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR TCA 90 bp GCCCCCGCGGCCCTGGCAGGACAGCTGGGCGTCCGCGTAGCGCTTCTCCTCCTTTGCCTGGAGGTGCCCTaGGCGGATGCTGCTCGGCCA +
Preference number: 2 (lower is better)
Translates to: APAALAGQLGVRVALLLLCLEVP*ADAARP
Trigger: TGGCCGAGCAGCATCCGCTCAGGGCACCTCCAGGCA...AAGGAGGAGAAGCGCTACGCGGACGCCCAGCTGTCCTGCCAGGGCCGCGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CAA 90 bp GCTTGCGCCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAGGACAGCTGG +
Preference number: 2 (lower is better)
Translates to: ACARYAAIRPLAASS*GMLSVPPRPWQDSW
Trigger: CCAGCTGTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR GCA 90 bp GCCCCCGCGGCCCTGGCAGGACAGCTGGGCGTCCGCGTAGCGCTTCTCCTCCTTCCTTGCGCAGCTGGCTaGACTCACATGGGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: APAALAGQLGVRVALLLLPCAAG*THMGGL
Trigger: GAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGG...AAGGAGGAGAAGCGCTACGCGGACGCCCAGCTGTCCTGCCAGGGCCGCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CCA 90 bp TGGTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGG +
Preference number: 2 (lower is better)
Translates to: WWCGRPRRSSRPRPPSPRMALRS*LHSHGR
Trigger: CCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCAT...GCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CCA 90 bp GGTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCACGTCGTAGGCATTGTTaGGCTCACCGCTGCGCCACT +
Preference number: 2 (lower is better)
Translates to: GGVAGHVVPAARGHHLHARRRHC*AHRCAT
Trigger: AGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACG...TGCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR TCA 90 bp CACGGGCCAGGCCGGCTTGCGCCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: HGPGRLAPGMRPSGHWQPQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...AGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CAA 90 bp CTTCTCCAGGTCGTTGATGCCGATGAAGACACGGGCCAGGCCGGCTaGCGCCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTT +
Preference number: 2 (lower is better)
Translates to: LLQVVDADEDTGQAG*RQVCGHQAIGSLVL
Trigger: AAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CAA 90 bp GGGGAGTGGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGTaGATGCCGATGAAGACACGGGCCAGGCCGGCTTGCGCCAGGTAT +
Preference number: 2 (lower is better)
Translates to: GEWSEYTKAPSFSRS*MPMKTRARPACARY
Trigger: ATACCTGGCGCAAGCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATTGTCCCTGCCAACCCTaGAGGGACATGTGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHCPCQP*RDMWGP
Trigger: GGGGCCCCACATGTCCCTGCAGGGTTGGCAGGGACA...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR CCA 90 bp GTTGAAGGTCCGCATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCTCCTTCTCTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 2 (lower is better)
Translates to: VEGPHGGVVRVHEGALLLWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...GAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATGCGGACCTTCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR GCA 90 bp TACACGAAGGCGCCCTCCTTCTCCAGGTCGTTGATGCCGATGAAGACACGGGCCGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 2 (lower is better)
Translates to: YTKAPSFSRSLMPMKTRAGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...GGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCCTTCGTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR TCA 90 bp CGCCACTTGTTGAAGGTCCGCATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATC +
Preference number: 2 (lower is better)
Translates to: RHLLKVRMGEWSEYTKAPSSLVS*ETWLSI
Trigger: GATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCT...GGGCGCCTTCGTGTACTCTGACCACTCCCCCATGCGGACCTTCAACAAGTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 2 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp CTCACCGCTGCGCCACTTGTTGAAGGTCCGCATGGGGGAGTGGTCAGAGTACACTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 2 (lower is better)
Translates to: LTAAPLVEGPHGGVVRVHSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...GTGTACTCTGACCACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CCA 90 bp CATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGTTGATCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 2 (lower is better)
Translates to: HGGVVRVHEGALLLQVVDRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...ATCAACGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR GCA 90 bp TTGCTCTCCGTCTCGCGCACACCGGCGACAGCATTCTTGATGAACTTGAGCTCGTCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCAC +
Preference number: 2 (lower is better)
Translates to: LLSVSRTPATAFLMNLSSSPRWP*AAGCTH
Trigger: GTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGA...CGAGCTCAAGTTCATCAAGAATGCTGTCGCCGGTGTGCGCGAGACGGAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR GCA 90 bp GGCGCCCTCCTTCTCCAGGTCGTTGATGCCGATGAAGACACGGGCCAGGCCGGCCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 2 (lower is better)
Translates to: GALLLQVVDADEDTGQAGQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...GCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGAGAGGGACAGCTCCCTaGCTGGCACCATGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQRGTAP*LAPWSG
Trigger: CCCAGACCATGGTGCCAGCCAGGGAGCTGTCCCTCT...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGTGTCCCTGCCAACCCTaGAGGGACATGTGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRCPCQP*RDMWGP
Trigger: GGGGCCCCACATGTCCCTGCAGGGTTGGCAGGGACA...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 2 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR CCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR TCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 2 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCTGTCCCTGCCAACCCTaGAGGGACATGTGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFCPCQP*RDMWGP
Trigger: GGGGCCCCACATGTCCCTGCAGGGTTGGCAGGGACA...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 2 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCGGTTGGCTGAGTGCCTaGAGGTGCCCTGAGCGGATG +
Preference number: 2 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSGWLSA*RCPERM
Trigger: CATCCGCTCAGGGCACCTCCAGGCACTCAGCCAACC...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR GCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATATGTCCCTGCCAACCCTaGAGGGACATGTGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVICPCQP*RDMWGP
Trigger: GGGGCCCCACATGTCCCTGCAGGGTTGGCAGGGACA...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 2 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGTCCCTGCCAACCCTaGAGGGACATGTGGGGCCCC +
Preference number: 2 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFCPCQP*RDMWGP
Trigger: GGGGCCCCACATGTCCCTGCAGGGTTGGCAGGGACA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 2 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 2 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR TCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATATCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 2 (lower is better)
Translates to: LGQRHKLYGRAILGNNYISGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGAATTCAAGACCCCATTaGCACTATTTGGACTTAACT +
Preference number: 2 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQNSRPH*HYLDLT
Trigger: AGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATT...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
3UTR-3UTR TCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR TCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATACAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 2 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 2 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
3UTR-3UTR GCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCAATTCAAGACCCCATTaGCACTATTTGGACTTAACT +
Preference number: 2 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFNSRPH*HYLDLT
Trigger: AGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATT...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
3UTR-3UTR GCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATACAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 2 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 2 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 2 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR GCA 72 bp CGGCCATCAGGCCATTGGCAGCCTCGTCCTTGGGCATaGTCAGCGTGCCCCCGCGGCCCTGGCAGGACAGCT +
Preference number: 3 (lower is better)
Translates to: RPSGHWQPRPWA*SACPRGPGRTA
Trigger: AGCTGTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CCA 72 bp GGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAGG +
Preference number: 3 (lower is better)
Translates to: GMRPSGHWQPRP*ACSACPRGPGR
Trigger: CCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CCA 72 bp GGCCGGCTTGCGCCAGGTATGCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCATGCTCAGCGTGCCCC +
Preference number: 3 (lower is better)
Translates to: GRLAPGMRPSGH*QPRPWACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 72 bp GATGAAGACACGGGCCAGGCCGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGCAGCCTCGTCCTTGGG +
Preference number: 3 (lower is better)
Translates to: DEDTGQAGLRQV*GHQAIGSLVLG
Trigger: CCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTGTCTTCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CAA 90 bp TTGGCAGCCTCGTCCTTGGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAGGACCCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 3 (lower is better)
Translates to: LAASSLGMLSVPPRPWQDPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...GTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 72 bp TCGTTGATGCCGATGAAGACACGGGCCAGGCCGGCTTaGGCCAGGTATGCGGCCATCAGGCCATTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: SLMPMKTRARPA*ARYAAIRPLAA
Trigger: GGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CAA 90 bp GTCCGCATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGTGTCTCCCAGAGGCTTaGTCCGGGCCCCTCAGGTTG +
Preference number: 3 (lower is better)
Translates to: VRMGEWSEYTKAPSFSRSCLPEA*SGPLRL
Trigger: CAACCTGAGGGGCCCGGACAAAGCCTCTGGGAGACA...CGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 72 bp GCTGAGAGACCTGGTTGTCCATCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCACATGGGAGGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: AERPGCPSPRWP*AAGCTHMGGLQ
Trigger: CTGGAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACAACCAGGTCTCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CCA 72 bp CCGCTGCGCCACTTGTTGAAGGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: PLRHLLKVRMGE*SEYTKAPSFSR
Trigger: CCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CAA 90 bp CATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGTTGATGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: HGGVVRVHEGALLLQVVDAAIRP*AASSLG
Trigger: GCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGC...ATCAACGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CAA 90 bp TACACGAAGGCGCCCTCCTTCTCCAGGTCGTTGATGCCGATGAAGACACGGGCCATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 3 (lower is better)
Translates to: YTKAPSFSRSLMPMKTRAISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...GGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCCTTCGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CCA 72 bp ACCTGGTTGTCCATCTCCCCGATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGGCCTCCAGGTCCTTCT +
Preference number: 3 (lower is better)
Translates to: TWLSISPMALRS*LHSHGRPPGPS
Trigger: AGAAGGACCTGGAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACAACCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR TCA 72 bp CGTAGGCATTGTTGGGCTCACCGCTGCGCCACTTGTTaGAGGTCCGCATGGGGGAGTGGTCAGAGTACACGA +
Preference number: 3 (lower is better)
Translates to: RRHCWAHRCATC*RSAWGSGQSTR
Trigger: TCGTGTACTCTGACCACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGAGCCCAACAATGCCTACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 72 bp CGTAGCGCTTCTCCTCCTTCACCAGCAGGTAGATCTTaGTCTCCGTCTCGCGCACACCGGCGACAGCATTCT +
Preference number: 3 (lower is better)
Translates to: RSASPPSPAGRS*SPSRAHRRQHS
Trigger: AGAATGCTGTCGCCGGTGTGCGCGAGACGGAGAGCAAGATCTACCTGCTGGTGAAGGAGGAGAAGCGCTACG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR-3UTR CAA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGACGGGCCAGGCCGGCTaGCGCCAGGTATGCGGCCAT +
Preference number: 3 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRTGQAG*RQVCGH
Trigger: ATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGT...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR TCA 72 bp CCATTTTCTCAGTTTAGACAACAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGAGGGACAGCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: PFSQFRQQPSTQ*ASTLHRGTAPW
Trigger: CCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACTGAGAAAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR TCA 72 bp ACAGCATTCTTGATGAACTTGAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATCTCCCCGATGGCCTTG +
Preference number: 3 (lower is better)
Translates to: TAFLMNLSSLVS*ETWLSISPMAL
Trigger: CAAGGCCATCGGGGAGATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCTCAAGTTCATCAAGAATGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR GCA 72 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACCCCAGGAACACTTTCA +
Preference number: 3 (lower is better)
Translates to: NDIGATIQVMKL*FFRDSTPGTLS
Trigger: TGAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp TTGGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAGGACAGCTGGGCGTCCGCGCGCTGCGCCACTTGTTaGAGGTCCGCATGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LGMLSVPPRPWQDSWASARCATC*RSAWGS
Trigger: ACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCG...CGCGGACGCCCAGCTGTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR GCA 90 bp TTGGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAGGACAGCTGGGCGTCCGCGCCTTGCGCAGCTGGCTaGACTCACATGGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGMLSVPPRPWQDSWASAPCAAG*THMGGL
Trigger: GAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGG...CGCGGACGCCCAGCTGTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp GCCCCCGCGGCCCTGGCAGGACAGCTGGGCGTCCGCGTAGCGCTTCTCCTCCTTCCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: APAALAGQLGVRVALLLLPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...AAGGAGGAGAAGCGCTACGCGGACGCCCAGCTGTCCTGCCAGGGCCGCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CAA 72 bp AGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RYAAIRPLAASS*GMLSVPPRPWQ
Trigger: CTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp CGCGGCCCTGGCAGGACAGCTGGGCGTCCGCGTAGCGCTTCTCCTCCTTCACCATCATCGCCAGCCGGCTaGGGATGTCCAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGPGRTAGRPRSASPPSPSSPAG*GCPDGS
Trigger: GCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGA...TGGTGAAGGAGGAGAAGCGCTACGCGGACGCCCAGCTGTCCTGCCAGGGCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR GCA 90 bp GGCGCCCTCCTTCTCCAGGTCGTTGATGCCGATGAAGACACGGGCCAGGCCGGCTGTCCCTGCCAACCCTaGAGGGACATGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GALLLQVVDADEDTGQAGCPCQP*RDMWGP
Trigger: GGGGCCCCACATGTCCCTGCAGGGTTGGCAGGGACA...GCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp TTGGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAGGACAGCTGGGCGTCCGCGAAGTACATGGTGGTGTaGCAGGCCACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LGMLSVPPRPWQDSWASAKYMVV*QATSFQ
Trigger: CTGGAACGACGTGGCCTGCCACACCACCATGTACTT...CGCGGACGCCCAGCTGTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
3UTR CAA 72 bp AGGCCGGCTTGCGCCAGGTATGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGCATGCTCAGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: RPACARYAAIRP*AASSLGMLSVP
Trigger: GGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATGGCCCGCGAGGACACTaGCCCCAGGCGCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHGPRGH*PQAPHG
Trigger: GCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCC...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236693.11
ENST00000382062.6
CDS-3UTR TCA 90 bp GGCGCCCTCCTTCTCCAGGTCGTTGATGCCGATGAAGACACGGGCCAGGCCGGCGATTCCCCCTCATCCTaGGCGCAGGCAGGACACCAA +
Preference number: 4 (lower is better)
Translates to: GALLLQVVDADEDTGQAGDSPSS*AQAGHQ
Trigger: TTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATC...GCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp GGTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCACAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: GGVAGHVVPAARGHHLHAQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...TGCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR GCA 90 bp TGGTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCCCAGCAGGTAGATCTTaGTCTCCGTCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: WWCGRPRRSSRPRPPSPRPAGRS*SPSRAH
Trigger: GTGTGCGCGAGACGGAGAGCAAGATCTACCTGCTGG...GCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCACCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR GCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCCTCGTCCTTGGGCATaGTCAGCGTGCCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGPRPWA*SACPRG
Trigger: GCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCCTCGTCCTTGGGCATaGTCAGCGTGCCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHPRPWA*SACPRG
Trigger: GCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCGGGCCAGGCCGGCTTaGGCCAGGTATGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGRARPA*ARYAAI
Trigger: GATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCGGGCCAGGCCGGCTTaGGCCAGGTATGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHRARPA*ARYAAI
Trigger: GATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR CAA 72 bp GTCGTTGATGCCGATGAAGACACGGGCCAGGCCGGCTaGCGCCAGGTATGCGGCCATCAGGCCATTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVDADEDTGQAG*RQVCGHQAIGS
Trigger: GCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp GTCCGCATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGCTCCCGCATCCCCTTTaGGGCCAGGGACGAGGATCT +
Preference number: 4 (lower is better)
Translates to: VRMGEWSEYTKAPSFSRSLPHPL*GQGRGS
Trigger: AGATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAG...CGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp GTCCGCATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VRMGEWSEYTKAPSFSRSRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...CGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp GCCTCGTCCTTGGGCATGCTCAGCGTGCCCCCGCGGCCCTGGCAGGACAGCTGGTGTCAAACTCACACATaGAGTACATGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ASSLGMLSVPPRPWQDSWCQTHT*STWWCG
Trigger: GCCACACCACCATGTACTTCATGTGTGAGTTTGACA...CCAGCTGTCCTGCCAGGGCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTCCTCGTCGTAGGCATTGTTGGGCTCACCGCTGCGCCACTTGTTGAAGGTCCGTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLVVGIVGLTAAPLVEGPWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...CGGACCTTCAACAAGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp TGCGCCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTTGGGCATGCTCGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: CARYAAIRPLAASSLGMLVRMGE*SEYTKA
Trigger: CGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC...GAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTTGGGCATGCTCAGCGTGAGAGGGACAGCTCCCTaGCTGGCACCATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RYAAIRPLAASSLGMLSVRGTAP*LAPWSG
Trigger: CCCAGACCATGGTGCCAGCCAGGGAGCTGTCCCTCT...CACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCTCCCGCATCCCCTTTaGGGCCAGGGACGAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHLPHPL*GQGRGS
Trigger: AGATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp TGGTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCGGACCAATTTTTCCATaGCGACCCACACTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: WWCGRPRRSSRPRPPSPRGPIFP*RPTLPF
Trigger: GAAAGGCAGTGTGGGTCGTCATGGAAAAATTGGTCC...GCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCGCTGCGCCACTTGTTaGAGGTCCGCATGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGRCATC*RSAWGS
Trigger: ACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCCTTGCGCAGCTGGCTaGACTCACATGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHPCAAG*THMGGL
Trigger: CAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATTCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCAC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHSPRWP*AAGCTH
Trigger: GTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGA...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCAC +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGSPRWP*AAGCTH
Trigger: GTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGA...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATTGTCCATCTCCCCGATaGCCTTGCGCAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHCPSPR*PCAAGC
Trigger: GCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACA...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTTGGGCATGCTCAGCGTGCGTCGTAGGCATTGTTaGGCTCACCGCTGCGCCACT +
Preference number: 4 (lower is better)
Translates to: RYAAIRPLAASSLGMLSVRRRHC*AHRCAT
Trigger: AGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACG...CACGCTGAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCAGAGGGACAGCTCCCTaGCTGGCACCATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGRGTAP*LAPWSG
Trigger: CCCAGACCATGGTGCCAGCCAGGGAGCTGTCCCTCT...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
3UTR CAA 72 bp TCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGTaGATGCCGATGAAGACACGGGCCAGGCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: SEYTKAPSFSRS*MPMKTRARPAC
Trigger: GCAAGCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCCAGGGACGAGGATCTaGACAGAGCAGGCGTCATCG +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHPGTRI*TEQASS
Trigger: CGATGACGCCTGCTCTGTGCAGATCCTCGTCCCTGG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCCTCGTCCTTGGGCATaGTCAGCGTGCCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQPRPWA*SACPRG
Trigger: GCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp CATGGGGGAGTGGTCAGAGTACACGAAGGCGCCCTCCTTCTCCAGGTCGTTGATGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: HGGVVRVHEGALLLQVVDGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...ATCAACGACCTGGAGAAGGAGGGCGCCTTCGTGTACTCTGACCACTCCCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR GCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGMALRS*LHSHGR
Trigger: CCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCAT...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHMALRS*LHSHGR
Trigger: CCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCAT...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCTCCTTTTTCTCCCGTaGGGCCGACTCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGLLFLP*GRLFQA
Trigger: GGCCTGGAAGAGTCGGCCCCACGGGAGAAAAAGGAG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349077.9
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCTCCTTTTTCTCCCGTaGGGCCGACTCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHLLFLP*GRLFQA
Trigger: GGCCTGGAAGAGTCGGCCCCACGGGAGAAAAAGGAG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349077.9
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCATTGGGCAGGGACGTaGCCTCCACAGCCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHHWAGT*PPQPKV
Trigger: GACTTTTGGCTGTGGAGGTCACGTCCCTGCCCAATG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR GCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCCAGCAGGTAGATCTTaGTCTCCGTCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHPAGRS*SPSRAH
Trigger: GTGTGCGCGAGACGGAGAGCAAGATCTACCTGCTGG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCCAGCAGGTAGATCTTaGTCTCCGTCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGPAGRS*SPSRAH
Trigger: GTGTGCGCGAGACGGAGAGCAAGATCTACCTGCTGG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATAAGCACAAAGGCCACTaGGCTTGTCTGGGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHKHKGH*ACLGCR
Trigger: CCTGCAGCCCAGACAAGCCCAGTGGCCTTTGTGCTT...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR TCA 90 bp CTCACACTCAGCCAAGTCACACCGGCAAGCACACCTTCCAAGCAGCCGTTCCTCAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: LTLSQVTPASTPSKQPFLSSLVS*ETWLSI
Trigger: GATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCT...GAGGAACGGCTGCTTGGAAGGTGTGCTTGCCGGTGTGACTTGGCTGAGTGTGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATATCACCTTTGCCACCTaGTGTCCTGCTGCACGAGGA +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHITFAT*CPAARG
Trigger: TCCTCGTGCAGCAGGACATCAGGTGGCAAAGGTGAT...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR GCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCCTCGTCCTTGGGCATaGTCAGCGTGCCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRPRPWA*SACPRG
Trigger: GCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGTGTCCCTGCCAACCCTaGAGGGACATGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQCPCQP*RDMWGP
Trigger: GGGGCCCCACATGTCCCTGCAGGGTTGGCAGGGACA...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCTCACATGGGAGGCCTaGTTCTCCATTAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHLTWEA*FSIRTR
Trigger: CCTGGTCCTAATGGAGAACCAGGCCTCCCATGTGAG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCTGGCTGCACTCACATaGGAGGCCTGGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHLAALT*EAWFSI
Trigger: AATGGAGAACCAGGCCTCCCATGTGAGTGCAGCCAG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCAAGTACATGGTGGTGTaGCAGGCCACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGKYMVV*QATSFQ
Trigger: CTGGAACGACGTGGCCTGCCACACCACCATGTACTT...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGTCATCGCCAGCCGGCTaGGGATGTCCAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQSSPAG*GCPDGS
Trigger: GCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGA...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCGCTGCGCCACTTGTTaGAGGTCCGCATGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQRCATC*RSAWGS
Trigger: ACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCGGCCCGCGAGGACACTaGCCCCAGGCGCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTGPRGH*PQAPHG
Trigger: GCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCC...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000236693.11
ENST00000382062.6
CDS-3UTR GCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGHDDPH*LSVLCP
Trigger: GGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGTCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCAC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQSPRWP*AAGCTH
Trigger: GTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGA...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGTGTCCATCTCCCCGATaGCCTTGCGCAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQCPSPR*PCAAGC
Trigger: GCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACA...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGACAGGAAGGCCAGGCTaGTTAGAACGCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQTGRPG*LERPPG
Trigger: CCCTGGTGGGCGTTCTAATCAGCCTGGCCTTCCTGT...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCAGGCGCCTCATGGCTaGTATTTAGAGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQQAPHG*YLERRP
Trigger: CGGCCGCCTCTCTAAATAGCAGCCATGAGGCGCCTG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236693.11
ENST00000382062.6
CDS-3UTR GCA 90 bp TGCGCCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTTGGGCATGCTCCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 4 (lower is better)
Translates to: CARYAAIRPLAASSLGMLQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...GAGCATGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQVRMGE*SEYTKA
Trigger: CGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGTCATCGCCAGCCGGCTaGGGATGTCCAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRSSPAG*GCPDGS
Trigger: GCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGA...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCTCCCGCATCCCCTTTaGGGCCAGGGACGAGGATCT +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRLPHPL*GQGRGS
Trigger: AGATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATTGTCAAACTCACACATaGAGTACATGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHCQTHT*STWWCG
Trigger: GCCACACCACCATGTACTTCATGTGTGAGTTTGACA...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGACGACTGGCTGTGACTaGTTTTTCTCCCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQTTGCD*FFSRGA
Trigger: GGCCCCACGGGAGAAAAAGCAGTCACAGCCAGTCGT...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS-3UTR GCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCCTTGCGCAGCTGGCTaGACTCACATGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRPCAAG*THMGGL
Trigger: CAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCCAGCAGGTAGATCTTaGTCTCCGTCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQPAGRS*SPSRAH
Trigger: GTGTGCGCGAGACGGAGAGCAAGATCTACCTGCTGG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAGAGGGACAGCTCCCTaGCTGGCACCATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRRGTAP*LAPWSG
Trigger: CCCAGACCATGGTGCCAGCCAGGGAGCTGTCCCTCT...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCAGGCCGGCTTTGGGGTaGGGGGCAGGACCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFRPALG*GAGPSW
Trigger: CCAGGAGGGTCCTGCCCCCCACCCCAAAGCCGGCCT...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000382062.6
CDS-3UTR CCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGGTCCCCCATGTCTCCTaGCAGGGCGCAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRVPHVS*QGAGKT
Trigger: TGTCTTCCCTGCGCCCTGCCAGGAGACATGGGGGAC...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402794.4
CDS-3UTR GCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCCTCGTCCTTGGGCATaGTCAGCGTGCCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSPRPWA*SACPRG
Trigger: GCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCACATGGGAGGCCTaGTTCTCCATTAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQLTWEA*FSIRTR
Trigger: CCTGGTCCTAATGGAGAACCAGGCCTCCCATGTGAG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRVRMGE*SEYTKA
Trigger: CGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCGTCGTAGGCATTGTTaGGCTCACCGCTGCGCCACT +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRRRRHC*AHRCAT
Trigger: AGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGAAGTACATGGTGGTGTaGCAGGCCACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQKYMVV*QATSFQ
Trigger: CTGGAACGACGTGGCCTGCCACACCACCATGTACTT...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCTCCCGCATCCCCTTTaGGGCCAGGGACGAGGATCT +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTLPHPL*GQGRGS
Trigger: AGATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRSSLVS*ETWLSI
Trigger: GATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCT...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCGCTGCGCCACTTGTTaGAGGTCCGCATGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTRCATC*RSAWGS
Trigger: ACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTTTGTTTCTTCATCGTaGAGGGCGTTACAACTTGGA +
Preference number: 4 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGFVSSS*RALQLG
Trigger: TCCAAGTTGTAACGCCCTTCACGATGAAGAAACAAA...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR TCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCTGCCTGGAGGTGCCCTaGGCGGATGCTGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSCLEVP*ADAARP
Trigger: TGGCCGAGCAGCATCCGCTCAGGGCACCTCCAGGCA...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR GCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCCAGCAGGTAGATCTTaGTCTCCGTCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRPAGRS*SPSRAH
Trigger: GTGTGCGCGAGACGGAGAGCAAGATCTACCTGCTGG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGTCCTCATCTCTGCGGTaGCGAAGGAGCTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRSSSLR*RRSWFS
Trigger: GGAGAACCAGCTCCTTCGGCACCGCAGAGATGAGGA...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCAGAGGGACAGCTCCCTaGCTGGCACCATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTRGTAP*LAPWSG
Trigger: CCCAGACCATGGTGCCAGCCAGGGAGCTGTCCCTCT...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCGATTCCCCCTCATCCTaGGCGCAGGCAGGACACCAA +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTDSPSS*AQAGHQ
Trigger: TTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATC...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCTGTCCCTGCCAACCCTaGAGGGACATGTGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSCPCQP*RDMWGP
Trigger: GGGGCCCCACATGTCCCTGCAGGGTTGGCAGGGACA...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCGCTTCCTGTCTGCGCTaGGTCCACCGTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSASCLR*VHRPAW
Trigger: CCAGGCAGGACGGTGGACGCAGCGCAGACAGGAAGC...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382062.6
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCTGCTTTTTCTCCCGTaGGGCCGACTCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTLLFLP*GRLFQA
Trigger: GGCCTGGAAGAGTCGGCCCCACGGGAGAAAAAGCAG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS-3UTR CCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCTCACATGGGAGGCCTaGTTCTCCATTAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRLTWEA*FSIRTR
Trigger: CCTGGTCCTAATGGAGAACCAGGCCTCCCATGTGAG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTVRMGE*SEYTKA
Trigger: CGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCAGAGGGACAGCTCCCTaGCTGGCACCATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFRGTAP*LAPWSG
Trigger: CCCAGACCATGGTGCCAGCCAGGGAGCTGTCCCTCT...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCACCTTTTTCTCCCGTaGGGCCGACTCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTHLFLP*GRLFQA
Trigger: GGCCTGGAAGAGTCGGCCCCACGGGAGAAAAAGGTG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382062.6
ENST00000402922.2
CDS-3UTR TCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCGATTCCCCCTCATCCTaGGCGCAGGCAGGACACCAA +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFDSPSS*AQAGHQ
Trigger: TTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATC...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTSSLVS*ETWLSI
Trigger: GATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCT...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGTGTCAAACTCACACATaGAGTACATGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQCQTHT*STWWCG
Trigger: GCCACACCACCATGTACTTCATGTGTGAGTTTGACA...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCATTGGGCAGGGACGTaGCCTCCACAGCCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTHWAGT*PPQPKV
Trigger: GACTTTTGGCTGTGGAGGTCACGTCCCTGCCCAATG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR GCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRHDDPH*LSVLCP
Trigger: GGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCCTTGCGCAGCTGGCTaGACTCACATGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSPCAAG*THMGGL
Trigger: CAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR GCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGCAGGTAGATCTTaGTCTCCGTCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTPAGRS*SPSRAH
Trigger: GTGTGCGCGAGACGGAGAGCAAGATCTACCTGCTGG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCGGGCCAGGCCGGCTTaGGCCAGGTATGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWRARPA*ARYAAI
Trigger: GATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCTGAGTGCCTGGAGGTaGCCTGAGCGGATGCTGCTC +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSLSAWR*PERMLL
Trigger: GAGCAGCATCCGCTCAGGGCACCTCCAGGCACTCAG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCCCCCAGGCGCCTCATaGCTGCTATTTAGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFPPGAS*LLFREA
Trigger: CGCCTCTCTAAATAGCAGCCATGAGGCGCCTGGGGG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000236693.11
ENST00000382062.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCGTCCTGCCCGTCGCTaGCCCGCGAGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFRPARR*PARTLP
Trigger: GGGCAGTGTCCTCGCGGGCCAGCGACGGGCAGGACG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236693.11
ENST00000382062.6
CDS-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCGTCCTGCCCGTCGCTaGCCCGCGAGGACACTGCCC +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSRPARR*PARTLP
Trigger: GGGCAGTGTCCTCGCGGGCCAGCGACGGGCAGGACG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000236693.11
ENST00000382062.6
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFMALRS*LHSHGR
Trigger: CCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCAT...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFVRMGE*SEYTKA
Trigger: CGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCAGAGGGACAGCTCCCTaGCTGGCACCATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSRGTAP*LAPWSG
Trigger: CCCAGACCATGGTGCCAGCCAGGGAGCTGTCCCTCT...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCTCCTTTTTCTCCCGTaGGGCCGACTCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFLLFLP*GRLFQA
Trigger: GGCCTGGAAGAGTCGGCCCCACGGGAGAAAAAGGAG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349077.9
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCGCCACTGGGCTTGTCTaGGCTGCAGGACAGTCCACT +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFATGLV*AAGQST
Trigger: AGTGGACTGTCCTGCAGCCCAGACAAGCCCAGTGGC...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR TCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCGATTCCCCCTCATCCTaGGCGCAGGCAGGACACCAA +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSDSPSS*AQAGHQ
Trigger: TTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATC...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGGGACCAATTTTTCCATaGCGACCCACACTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRGPIFP*RPTLPF
Trigger: GAAAGGCAGTGTGGGTCGTCATGGAAAAATTGGTCC...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFSSLVS*ETWLSI
Trigger: GATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCT...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCATTGGGCAGGGACGTaGCCTCCACAGCCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFHWAGT*PPQPKV
Trigger: GACTTTTGGCTGTGGAGGTCACGTCCCTGCCCAATG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCCTCGTCCTTGGGCATaGTCAGCGTGCCCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFPRPWA*SACPRG
Trigger: GCCGCGGGGGCACGCTGAGCATGCCCAAGGACGAGG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR GCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCGGGCCAGGCCGGCTTaGGCCAGGTATGCGGCCATC +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSRARPA*ARYAAI
Trigger: GATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGCTGTCCGGACCCTGTaGCCCGGGAGAGGGCTGACC +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSAVRTL*PGRGLT
Trigger: GGTCAGCCCTCTCCCGGGGCACAGGGTCCGGACAGC...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCGCCCCCAGCCAGAGCTaGACAGCCTGGCAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFAPSQS*TAWQGG
Trigger: GCCACCCTGCCAGGCTGTGCAGCTCTGGCTGGGGGC...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR GCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCACCTGATGTCCTGCTaGACGAGGAGTTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTHLMSC*TRSSPR
Trigger: TCTGGGAGAACTCCTCGTGCAGCAGGACATCAGGTG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR GCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCTGGGCAGATCACCTTTaGCACCTGATGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTWADHL*HLMSCC
Trigger: GCAGCAGGACATCAGGTGGCAAAGGTGATCTGCCCA...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR GCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCGTTCCTCCTCATCTCTaGGGTGCCGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFVPPHL*GAEGAG
Trigger: ACCAGCTCCTTCGGCACCGCAGAGATGAGGAGGAAC...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCTCACATGGGAGGCCTaGTTCTCCATTAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTLTWEA*FSIRTR
Trigger: CCTGGTCCTAATGGAGAACCAGGCCTCCCATGTGAG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCTGGCTGCACTCACATaGGAGGCCTGGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTLAALT*EAWFSI
Trigger: AATGGAGAACCAGGCCTCCCATGTGAGTGCAGCCAG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSMALRS*LHSHGR
Trigger: CCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCAT...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTCGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCGTCGTAGGCATTGTTaGGCTCACCGCTGCGCCACT +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSRRRHC*AHRCAT
Trigger: AGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAGTCCACCGTCCTGCCTaGGGAGTGTGGGAACGCCTG +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIVHRPA*GVWERL
Trigger: CAGGCGTTCCCACACTCCCCAGGCAGGACGGTGGAC...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382062.6
CDS-3UTR TCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATATCATCGCCAGCCGGCTaGGGATGTCCAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVISSPAG*GCPDGS
Trigger: GCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGA...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCTGTCACGACTGGCTGTaGCTGCTTTTTCTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFCHDWL*LLFLPW
Trigger: CCACGGGAGAAAAAGCAGTCACAGCCAGTCGTGACA...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS-3UTR TCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSSSLVS*ETWLSI
Trigger: GATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCT...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTHDDPH*LSVLCP
Trigger: GGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATG...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACCTTGCGCAGCTGGCTaGACTCACATGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIPCAAG*THMGGL
Trigger: CAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR GCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATATCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCAC +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVISPRWP*AAGCTH
Trigger: GTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGA...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATACTGCGTCCACCGTCCTaGCTGGGGAGTGTGGGAACG +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYILRPPS*LGSVGT
Trigger: CGTTCCCACACTCCCCAGGCAGGACGGTGGACGCAG...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382062.6
CDS-3UTR CCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCTCACATGGGAGGCCTaGTTCTCCATTAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFLTWEA*FSIRTR
Trigger: CCTGGTCCTAATGGAGAACCAGGCCTCCCATGTGAG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATATGTCCATCTCCCCGATaGCCTTGCGCAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVICPSPR*PCAAGC
Trigger: GCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACA...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTCGTCGTAGGCATTGTTaGGCTCACCGCTGCGCCACT +
Preference number: 4 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLRRRHC*AHRCAT
Trigger: AGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACG...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR CCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATACCCTGGCTGGCACCATaGTCTGGGCTCTGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIPWLAP*SGLCPC
Trigger: GCAGGGACAGAGCCCAGACCATGGTGCCAGCCAGGG...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAAGAGGGACAGCTCCCTaGCTGGCACCATGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIRGTAP*LAPWSG
Trigger: CCCAGACCATGGTGCCAGCCAGGGAGCTGTCCCTCT...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCTCTCCCGCATCCCCTaGCAGGGCGCAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWLSRIP*QGAGKT
Trigger: TGTCTTCCCTGCGCCCTGCCAGGGGATGCGGGAGAG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402922.2
ENST00000403096.7
CDS-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCGGTGCCGAAGGAGCTaGTTCTCCATTAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSRCRRS*FSIRTR
Trigger: CCTGGTCCTAATGGAGAACCAGCTCCTTCGGCACCG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATATCATCGCCAGCCGGCTaGGGATGTCCAGATGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYISSPAG*GCPDGS
Trigger: GCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGA...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACAGGCGCCTCATGGCTaGTATTTAGAGAGGCGGCCG +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIQAPHG*YLERRP
Trigger: CGGCCGCCTCTCTAAATAGCAGCCATGAGGCGCCTG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000236693.11
ENST00000382062.6
CDS-3UTR GCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCCTTGCGCAGCTGGCTaGACTCACATGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWPCAAG*THMGGL
Trigger: CAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR GCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGTCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCAC +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWSPRWP*AAGCTH
Trigger: GTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGA...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATATCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCAC +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYISPRWP*AAGCTH
Trigger: GTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGA...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATATCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVISGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCGGGGAGCTTCCTGTCTaGGCTGCGTCCACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFGELPV*AASTVL
Trigger: CAGGACGGTGGACGCAGCGCAGACAGGAAGCTCCCC...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382062.6
CDS-3UTR GCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCTGGGCTTGTCTGGGCTaGAGGACAGTCCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSWACLG*RTVHLV
Trigger: AACCAAGTGGACTGTCCTGCAGCCCAGACAAGCCCA...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCTGGCTGCACTCACATaGGAGGCCTGGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSLAALT*EAWFSI
Trigger: AATGGAGAACCAGGCCTCCCATGTGAGTGCAGCCAG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIMALRS*LHSHGR
Trigger: CCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCAT...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGTGTCCATCTCCCCGATaGCCTTGCGCAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWCPSPR*PCAAGC
Trigger: GCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACA...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCAGCCTCGTCCTTaGGCATGCTCAGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFWQPRP*ACSACP
Trigger: GGGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATACGGCCATCAGGCCATTaGCAGCCTCGTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIRPSGH*QPRPWA
Trigger: TGCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCG...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACGTCGTAGGCATTGTTaGGCTCACCGCTGCGCCACT +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIRRRHC*AHRCAT
Trigger: AGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCAAGTACATGGTGGTGTaGCAGGCCACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSKYMVV*QATSFQ
Trigger: CTGGAACGACGTGGCCTGCCACACCACCATGTACTT...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACACCTTTTTCTCCCGTaGGGCCGACTCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIHLFLP*GRLFQA
Trigger: GGCCTGGAAGAGTCGGCCCCACGGGAGAAAAAGGTG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382062.6
ENST00000402922.2
CDS-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCTCTCCCGCATCCCCTaGCAGGGCGCAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSLSRIP*QGAGKT
Trigger: TGTCTTCCCTGCGCCCTGCCAGGGGATGCGGGAGAG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402922.2
ENST00000403096.7
CDS-3UTR TCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCCCCATGTCTCCCTGTaGTCCCATTTCTACAAAGGA +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFPHVSL*SHFYKG
Trigger: TCCTTTGTAGAAATGGGATCACAGGGAGACATGGGG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS-3UTR TCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVISSLVS*ETWLSI
Trigger: GATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCT...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCGCTGCGCCACTTGTTaGAGGTCCGCATGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSRCATC*RSAWGS
Trigger: ACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCGCTGCGCCACTTGTTaGAGGTCCGCATGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFRCATC*RSAWGS
Trigger: ACTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSHDDPH*LSVLCP
Trigger: GGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCCTTGCGCAGCTGGCTaGACTCACATGGGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSPCAAG*THMGGL
Trigger: CAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR GCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACCAGCAGGTAGATCTTaGTCTCCGTCTCGCGCACAC +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIPAGRS*SPSRAH
Trigger: GTGTGCGCGAGACGGAGAGCAAGATCTACCTGCTGG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCGGCTTGCGCCAGGTATaGGGCCATCAGGCCATTGGC +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFGLRQV*GHQAIG
Trigger: GCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCC...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCCCCCAGGCGCCTCATaGCTGCTATTTAGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWPPGAS*LLFREA
Trigger: CGCCTCTCTAAATAGCAGCCATGAGGCGCCTGGGGG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000236693.11
ENST00000382062.6
CDS-3UTR CCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTCTGGCTGCACTCACATaGGAGGCCTGGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLLAALT*EAWFSI
Trigger: AATGGAGAACCAGGCCTCCCATGTGAGTGCAGCCAG...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWMALRS*LHSHGR
Trigger: CCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCAT...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTTGTCCATCTCCCCGATaGCCTTGCGCAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSCPSPR*PCAAGC
Trigger: GCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACA...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGTCCATCTCCCCGATaGCCTTGCGCAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFCPSPR*PCAAGC
Trigger: GCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIVRMGE*SEYTKA
Trigger: CGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWVRMGE*SEYTKA
Trigger: CGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCGAGTGTGGGAACGCCTaGAACTCCCTGAGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFECGNA*NSLRPA
Trigger: AGCCGGCCTCAGGGAGTTCCAGGCGTTCCCACACTC...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382062.6
CDS-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGTTGGCTGAGTGCCTaGAGGTGCCCTGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSGWLSA*RCPERM
Trigger: CATCCGCTCAGGGCACCTCCAGGCACTCAGCCAACC...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR TCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCGGACCAATTTTTCCATaGCGACCCACACTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSGPIFP*RPTLPF
Trigger: GAAAGGCAGTGTGGGTCGTCATGGAAAAATTGGTCC...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGAGCTCGCTGGTCAGCTaGGAGACCTGGTTGTCCATC +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWSSLVS*ETWLSI
Trigger: GATGGACAACCAGGTCTCTCAGCTGACCAGCGAGCT...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATACATTGGGCAGGGACGTaGCCTCCACAGCCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIHWAGT*PPQPKV
Trigger: GACTTTTGGCTGTGGAGGTCACGTCCCTGCCCAATG...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR TCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCTTGTACAACACGGGCTaGGCAGGGTTTGTCTTTCGT +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSLYNTG*AGFVFR
Trigger: ACGAAAGACAAACCCTGCTCAGCCCGTGTTGTACAA...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCTGGGCTCTGTCCCTaGCAACCCTGCAGGGACATG +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFSGLCP*QPCRDM
Trigger: CATGTCCCTGCAGGGTTGGCAGGGACAGAGCCCAGA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGG +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSMALRS*LHSHGR
Trigger: CCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCAT...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCGTCCGCATGGGGGAGTaGTCAGAGTACACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFVRMGE*SEYTKA
Trigger: CGCCTTCGTGTACTCTGACCACTCCCCCATGCGGAC...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCGTCGTAGGCATTGTTaGGCTCACCGCTGCGCCACT +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSRRRHC*AHRCAT
Trigger: AGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCGTCGTAGGCATTGTTaGGCTCACCGCTGCGCCACT +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFRRRHC*AHRCAT
Trigger: AGTGGCGCAGCGGTGAGCCCAACAATGCCTACGACG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTGGACCAATTTTTCCATaGCGACCCACACTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLGPIFP*RPTLPF
Trigger: GAAAGGCAGTGTGGGTCGTCATGGAAAAATTGGTCC...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349077.9
ENST00000418971.6
CDS-3UTR TCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCAGCCCTCTACTCAGTaGGCCTCCACCCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSQPSTQ*ASTLHR
Trigger: TCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 4 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGCCACCTGATGTCCTaGTGCACGAGGAGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFCHLMS*CTRSSP
Trigger: GGGAGAACTCCTCGTGCAGCAGGACATCAGGTGGCA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCTGGCTGCACTCACATaGGAGGCCTGGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWLAALT*EAWFSI
Trigger: AATGGAGAACCAGGCCTCCCATGTGAGTGCAGCCAG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAAAGTACATGGTGGTGTaGCAGGCCACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIKYMVV*QATSFQ
Trigger: CTGGAACGACGTGGCCTGCCACACCACCATGTACTT...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGAAGTACATGGTGGTGTaGCAGGCCACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWKYMVV*QATSFQ
Trigger: CTGGAACGACGTGGCCTGCCACACCACCATGTACTT...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAATCTCCTTTCTCACCTaGCAGGGCGCAGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIISFLT*QGAGKT
Trigger: TGTCTTCCCTGCGCCCTGCCAGGTGAGAAAGGAGAT...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404205.5
CDS-3UTR CCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGTTTGGGAGGCTGAGGTaGGCAGATCACCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWFGRLR*ADHLCH
Trigger: GTGGCAAAGGTGATCTGCCCACCTCAGCCTCCCAAA...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR TCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTTGTCAAACTCACACATaGAGTACATGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLCQTHT*STWWCG
Trigger: GCCACACCACCATGTACTTCATGTGTGAGTTTGACA...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR GCA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWHDDPH*LSVLCP
Trigger: GGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCTCACATGGGAGGCCTaGTTCTCCATTAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFLTWEA*FSIRTR
Trigger: CCTGGTCCTAATGGAGAACCAGGCCTCCCATGTGAG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCTGGCTGCACTCACATaGGAGGCCTGGTTCTCCATT +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFLAALT*EAWFSI
Trigger: AATGGAGAACCAGGCCTCCCATGTGAGTGCAGCCAG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTAAGTACATGGTGGTGTaGCAGGCCACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSKYMVV*QATSFQ
Trigger: CTGGAACGACGTGGCCTGCCACACCACCATGTACTT...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCAAGTACATGGTGGTGTaGCAGGCCACGTCGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFKYMVV*QATSFQ
Trigger: CTGGAACGACGTGGCCTGCCACACCACCATGTACTT...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAGCAGGACAGTCCACTTaGTTTCCAACAGCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIAGQST*FPTAGL
Trigger: TAGCCCTGCTGTTGGAAACCAAGTGGACTGTCCTGC...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR CCA 90 bp GGTAGTAATTCAAGACCCCATTGCCACTATTTGGACTTAACTACTGCACTACTTAAGGGCGTTACAACTTaGAAAACAAGACCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: GSNSRPHCHYLDLTTALLKGVTT*KTRPGA
Trigger: TGCGCCTGGTCTTGTTTTCCAAGTTGTAACGCCCTT...AAGTAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATTACTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR TCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATATGTCAAACTCACACATaGAGTACATGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVICQTHT*STWWCG
Trigger: GCCACACCACCATGTACTTCATGTGTGAGTTTGACA...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCGAAGGGAAGTCATTTaGAATCCTTCTCCCAAATCT +
Preference number: 4 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSRREVI*NPSPKS
Trigger: AGATTTGGGAGAAGGATTTCAAATGACTTCCCTTCG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR GCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSHDDPH*LSVLCP
Trigger: GGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR GCA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCAATTCAAGACCCCATTaGCACTATTTGGACTTAACT +
Preference number: 4 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTNSRPH*HYLDLT
Trigger: AGTTAAGTCCAAATAGTGGCAATGGGGTCTTGAATT...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR TCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGACCAATTTTTCCATaGCGACCCACACTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSGPIFP*RPTLPF
Trigger: GAAAGGCAGTGTGGGTCGTCATGGAAAAATTGGTCC...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000402794.4
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATATGTCAAACTCACACATaGAGTACATGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYICQTHT*STWWCG
Trigger: GCCACACCACCATGTACTTCATGTGTGAGTTTGACA...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATATTTCACCAAAACTTCTaGGAGAGCCGTAGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIFHQNF*ESRRHP
Trigger: TGGATGCCTACGGCTCTCTCAGAAGTTTTGGTGAAA...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR GCA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 4 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR TCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGTCAAACTCACACATaGAGTACATGGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFCQTHT*STWWCG
Trigger: GCCACACCACCATGTACTTCATGTGTGAGTTTGACA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTTCTCCCAGAAATGTGTaGAGGTCAAGATGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSSPRNV*RSRCPR
Trigger: TCTTGGGCATCTTGACCTCCACACATTTCTGGGAGA...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR GCA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCTACAAAGGACGAGGTaGACTTCCTTTTGGAGATGT +
Preference number: 4 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFLQRTR*TSFWRC
Trigger: ACATCTCCAAAAGGAAGTGCACCTCGTCCTTTGTAG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS-3UTR GCA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCAGGTAATGAAACTCTaGTTCTTCAGAGACAGCACC +
Preference number: 4 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSQVMKL*FFRDST
Trigger: GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS GCA 90 bp CTAGGCGAACGGGGCGTCCTGCCCGTCGCTGGCCCGCGAGGACACTaGCCCCAGGCGCCTCATGGCTGCTATTTAGAGAGGCGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: LGERGVLPVAGPRGH*PQAPHGCYLERRPQ
Trigger: CTGCGGCCGCCTCTCTAAATAGCAGCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCCAGCGACGGGCAGGACGCCCCGTTCGCCTAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000382062.6
ENST00000419002.6
ENST00000460971.5
ENST00000487365.5
CDS GCA 90 bp CCCGTCGCTGGCCCGCGAGGACACTGCCCCCAGGCGCCTCATGGCTaGTATTTAGAGAGGCGGCCGCAGTCCCAGGCGCAGGGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: PVAGPRGHCPQAPHG*YLERRPQSQAQGEA
Trigger: GGCTTCTCCCTGCGCCTGGGACTGCGGCCGCCTCTCTAAATAGCAGCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCCAGCGACGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382062.6
ENST00000419002.6
ENST00000460971.5
ENST00000487365.5
CDS GCA 90 bp GGCCGCCCGGCCGCAGCGTTATCTCGGGGAGCTTCCTGTCTGCGCTaGGTCCACCGTCCTGCCTGGGGAGTGTGGGAACGCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: GRPAAALSRGASCLR*VHRPAWGVWERLEL
Trigger: GAGTTCCAGGCGTTCCCACACTCCCCAGGCAGGACGGTGGACGCAGCGCAGACAGGAAGCTCCCCGAGATAACGCTGCGGCCGGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382062.6
ENST00000419002.6
CDS GCA 90 bp AATCAGGCCGCCCGGCCGCAGCGTTATCTCGGGGAGCTTCCTGTCTaGGCTGCGTCCACCGTCCTGCCTGGGGAGTGTGGGAACGCCTGG +
Preference number: 5 (lower is better)
Translates to: NQAARPQRYLGELPV*AASTVLPGECGNAW
Trigger: CCAGGCGTTCCCACACTCCCCAGGCAGGACGGTGGACGCAGCGCAGACAGGAAGCTCCCCGAGATAACGCTGCGGCCGGGCGGCCTGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382062.6
ENST00000419002.6
CDS-3UTR CAA 90 bp GGTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCATTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: GGVAGHVVPAARGHHLHALAASS*GMLSVP
Trigger: GGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAA...TGCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CAA 90 bp GGCGCCCTCCTTCTCCAGGTCGTTGATGCCGATGAAGACACGGGCCAGGCCGGCGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GALLLQVVDADEDTGQAGAAIRP*AASSLG
Trigger: GCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGC...GCCGGCCTGGCCCGTGTCTTCATCGGCATCAACGACCTGGAGAAGGAGGGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CAA 90 bp GTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCAGATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 5 (lower is better)
Translates to: VVWQATSFQPPEATISTQISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...CTGCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS CCA 90 bp TTATCTCGGGGAGCTTCCTGTCTGCGCTGCGTCCACCGTCCTGCCTaGGGAGTGTGGGAACGCCTGGAACTCCCTGAGGCCGGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: LSRGASCLRCVHRPA*GVWERLELPEAGFG
Trigger: CCCAAAGCCGGCCTCAGGGAGTTCCAGGCGTTCCCACACTCCCCAGGCAGGACGGTGGACGCAGCGCAGACAGGAAGCTCCCCGAGATAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382062.6
ENST00000419002.6
CDS-3UTR CAA 90 bp GTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCAGCCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: VVWQATSFQPPEATISTQPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...CTGCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CAA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGAAIRP*AASSLG
Trigger: GCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGC...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHAAIRP*AASSLG
Trigger: GCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGC...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATTTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHLAASS*GMLSVP
Trigger: GGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAA...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCCGCTGCGCCACTTGTaGAAGGTCCGCATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHPLRHL*KVRMGE
Trigger: CTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATGAGGCACCCACCACATaGGGCAGGGACGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHEAPTT*GRDVTS
Trigger: GGAGGTCACGTCCCTGCCCAATGTGGTGGGTGCCTC...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR CAA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTCTCCCGCATCCCCTTaGAGGCCAGGGACGAGGATC +
Preference number: 5 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGSPASP*RPGTRI
Trigger: GATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAGA...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATTCTCCCGCATCCCCTTaGAGGCCAGGGACGAGGATC +
Preference number: 5 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHSPASP*RPGTRI
Trigger: GATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAGA...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 5 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 5 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTCACCGCTGCGCCACTaGTTGAAGGTCCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGSPLRH*LKVRMG
Trigger: CCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGA...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp GGCCAGGCCGGCTTGCGCCAGGTATGCGGCCATCAGGCCATTGGCAGCCTCGTCCTGCCTTTCTGTCCTTaGTCCCCCATGTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: GQAGLRQVCGHQAIGSLVLPFCP*SPMSPF
Trigger: AAAAGGAGACATGGGGGACAAAGGACAGAAAGGCAG...GACGAGGCTGCCAATGGCCTGATGGCCGCATACCTGGCGCAAGCCGGCCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS TCA 90 bp ACAACCGTAGGGACTCGGAGGCACCCACCACATTGGGCAGGGACGTaGCCTCCACAGCCAAAAGTCCAGCTCTCCACAGCCACCGTTTCC +
Preference number: 5 (lower is better)
Translates to: TTVGTRRHPPHWAGT*PPQPKVQLSTATVS
Trigger: GGAAACGGTGGCTGTGGAGAGCTGGACTTTTGGCTGTGGAGGTCACGTCCCTGCCCAATGTGGTGGGTGCCTCCGAGTCCCTACGGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR CAA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGACGGGCCAGGCCGGCTaGCGCCAGGTATGCGGCCAT +
Preference number: 5 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQTGQAG*RQVCGH
Trigger: ATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGT...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQAAIRP*AASSLG
Trigger: GCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGC...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp TTGCTCTCCGTCTCGCGCACACCGGCGACAGCATTCTTGATGAACTTGAGCTCGTCACCGCTGCGCCACTaGTTGAAGGTCCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: LLSVSRTPATAFLMNLSSSPLRH*LKVRMG
Trigger: CCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGA...CGAGCTCAAGTTCATCAAGAATGCTGTCGCCGGTGTGCGCGAGACGGAGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CAA 90 bp GTGGTGTGGCAGGCCACGTCGTTCCAGCCGCCCGAGGCCACCATCTCCACGCAGGCTCACATGTTCTCCTaGTCAAACTCACACATGAAG +
Preference number: 5 (lower is better)
Translates to: VVWQATSFQPPEATISTQAHMFS*SNSHMK
Trigger: CTTCATGTGTGAGTTTGACAAGGAGAACATGTGAGC...CTGCGTGGAGATGGTGGCCTCGGGCGGCTGGAACGACGTGGCCTGCCACACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CAA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCCGCTGCGCCACTTGTaGAAGGTCCGCATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQPLRHL*KVRMGE
Trigger: CTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS GCA 90 bp GGGAGGCTGAGGTGGGCAGATCACCTTTGCCACCTGATGTCCTGCTaGACGAGGAGTTCTCCCAGAAATGTGTGGAGGTCAAGATGCCCA +
Preference number: 5 (lower is better)
Translates to: GRLRWADHLCHLMSC*TRSSPRNVWRSRCP
Trigger: TGGGCATCTTGACCTCCACACATTTCTGGGAGAACTCCTCGTGCAGCAGGACATCAGGTGGCAAAGGTGATCTGCCCACCTCAGCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418971.6
ENST00000438814.5
CDS-3UTR CAA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGTCTCCCGCATCCCCTTaGAGGCCAGGGACGAGGATC +
Preference number: 5 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQSPASP*RPGTRI
Trigger: GATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAGA...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 5 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCACGGGCCAGGCCGGCTaGCGCCAGGTATGCGGCCAT +
Preference number: 5 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTTGQAG*RQVCGH
Trigger: ATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGT...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCTGCCTTTCTGTCCTTaGTCCCCCATGTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGLPFCP*SPMSPF
Trigger: AAAAGGAGACATGGGGGACAAAGGACAGAAAGGCAG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349077.9
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCAAAGGCCACTGGGCTaGTCTGGGCTGCAGGACAGT +
Preference number: 5 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQQRPLG*SGLQDS
Trigger: ACTGTCCTGCAGCCCAGACAAGCCCAGTGGCCTTTG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR CAA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 5 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTAAIRP*AASSLG
Trigger: GCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGC...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCACGGGCCAGGCCGGCTaGCGCCAGGTATGCGGCCAT +
Preference number: 5 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFTGQAG*RQVCGH
Trigger: ATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGT...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCTTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTLAASS*GMLSVP
Trigger: GGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAA...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCGCTCACATGTTCTCCTaGTCAAACTCACACATGAAG +
Preference number: 5 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGAHMFS*SNSHMK
Trigger: CTTCATGTGTGAGTTTGACAAGGAGAACATGTGAGC...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCTGGCACCATCCCCATTGCCACTATTaGGACTTAACTACTGCACTA +
Preference number: 5 (lower is better)
Translates to: LLSEPPPFTEGQLPGWHHPHCHY*DLTTAL
Trigger: TAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGG...ATGGTGCCAGCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR CAA 90 bp AACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGCTCCCTGGCCCCCATTGCCACTATTaGGACTTAACTACTGCACTA +
Preference number: 5 (lower is better)
Translates to: NSPLLSEPPPFTEGQLPGPHCHY*DLTTAL
Trigger: TAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGG...GCCAGGGAGCTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR CAA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCTCTCCCGCATCCCCTTaGAGGCCAGGGACGAGGATC +
Preference number: 5 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTSPASP*RPGTRI
Trigger: GATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAGA...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 5 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCCGCTGCGCCACTTGTaGAAGGTCCGCATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFPLRHL*KVRMGE
Trigger: CTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCTCACCGCTGCGCCACTaGTTGAAGGTCCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTSPLRH*LKVRMG
Trigger: CCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGA...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS GCA 90 bp TGTCCCCCATGTCTCCCTGTGATCCCATTTCTACAAAGGACGAGGTaGACTTCCTTTTGGAGATGTCAGAAGCTGTCACGACTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: CPPCLPVIPFLQRTR*TSFWRCQKLSRLAV
Trigger: CACAGCCAGTCGTGACAGCTTCTGACATCTCCAAAAGGAAGTGCACCTCGTCCTTTGTAGAAATGGGATCACAGGGAGACATGGGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS-3UTR CAA 90 bp AGTTTAGACAACAGCCCTCTACTCAGTGAGCCTCCACCCTTCACAGAGGGACAGGAGGTGCACTTCCTTTaGGAGATGTCAGAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SLDNSPLLSEPPPFTEGQEVHFL*EMSEAV
Trigger: GACAGCTTCTGACATCTCCAAAAGGAAGTGCACCTC...CTGTCCCTCTGTGAAGGGTGGAGGCTCACTGAGTAGAGGGCTGTTGTCTAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS-3UTR CAA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGCCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCTTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSLAASS*GMLSVP
Trigger: GGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAA...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAACGGGCCAGGCCGGCTaGCGCCAGGTATGCGGCCAT +
Preference number: 5 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVITGQAG*RQVCGH
Trigger: ATGGCCGCATACCTGGCGCAAGCCGGCCTGGCCCGT...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCCGCTGCGCCACTTGTaGAAGGTCCGCATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSPLRHL*KVRMGE
Trigger: CTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCTCACCGCTGCGCCACTaGTTGAAGGTCCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFSPLRH*LKVRMG
Trigger: CCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGA...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIAAIRP*AASSLG
Trigger: GCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGC...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAGCGGCCATCAGGCCATaGGCAGCCTCGTCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIAAIRP*AASSLG
Trigger: GCCCAAGGACGAGGCTGCCAATGGCCTGATGGCCGC...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACCGCTGCGCCACTTGTaGAAGGTCCGCATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIPLRHL*KVRMGE
Trigger: CTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAGAGGCACCCACCACATaGGGCAGGGACGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIEAPTT*GRDVTS
Trigger: GGAGGTCACGTCCCTGCCCAATGTGGTGGGTGCCTC...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR CAA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCGTCCGGGGGCGCCTTaGTCTCCCTTCTCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSRPGAP*SPFSPA
Trigger: TGCGGGAGAGAAGGGAGACAAAGGCGCCCCCGGACG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402922.2
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCTGCCTTTCTGTCCTTaGTCCCCCATGTCTCCCTGT +
Preference number: 5 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFLPFCP*SPMSPC
Trigger: ACAGGGAGACATGGGGGACAAAGGACAGAAAGGCAG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS-3UTR CAA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATATTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYILAASS*GMLSVP
Trigger: GGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAA...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGTTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWLAASS*GMLSVP
Trigger: GGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAA...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCCGCTGCGCCACTTGTaGAAGGTCCGCATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWPLRHL*KVRMGE
Trigger: CTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATACCGCTGCGCCACTTGTaGAAGGTCCGCATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIPLRHL*KVRMGE
Trigger: CTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AATGACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCCCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: NDIGATIQVMKLCFFRDSPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...GCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTTGGCAGCCTCGTCCTaGGGCATGCTCAGCGTGCCC +
Preference number: 5 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFLAASS*GMLSVP
Trigger: GGGCACGCTGAGCATGCCCAAGGACGAGGCTGCCAA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCCGCTGCGCCACTTGTaGAAGGTCCGCATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFPLRHL*KVRMGE
Trigger: CTCCCCCATGCGGACCTTCAACAAGTGGCGCAGCGG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATATCACCGCTGCGCCACTaGTTGAAGGTCCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYISPLRH*LKVRMG
Trigger: CCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGA...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp TGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGGCTCACATGTTCTCCTaGTCAAACTCACACATGAAG +
Preference number: 5 (lower is better)
Translates to: WGYNTGNETLLLQRQHPRAHMFS*SNSHMK
Trigger: CTTCATGTGTGAGTTTGACAAGGAGAACATGTGAGC...CCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCGAGGCACCCACCACATaGGGCAGGGACGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFEAPTT*GRDVTS
Trigger: GGAGGTCACGTCCCTGCCCAATGTGGTGGGTGCCTC...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR CAA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGAGGCACCCACCACATaGGGCAGGGACGTGACCTCC +
Preference number: 5 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSEAPTT*GRDVTS
Trigger: GGAGGTCACGTCCCTGCCCAATGTGGTGGGTGCCTC...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS-3UTR CAA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTATCTCCCCGATGGCCTaGCGCAGCTGGCTGCACTCA +
Preference number: 5 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSISPMA*RSWLHS
Trigger: TGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGAT...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTTCACCGCTGCGCCACTaGTTGAAGGTCCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSSPLRH*LKVRMG
Trigger: CCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGA...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCACCGCTGCGCCACTaGTTGAAGGTCCGCATGGGG +
Preference number: 5 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFSPLRH*LKVRMG
Trigger: CCCCATGCGGACCTTCAACAAGTGGCGCAGCGGTGA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCCCAGGAACACTTTCCTGCCTTTCTGTCCTTaGTCCCCCATGTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: NTGNETLLLQRQHPRNTFLPFCP*SPMSPF
Trigger: AAAAGGAGACATGGGGGACAAAGGACAGAAAGGCAG...GAAAGTGTTCCTGGGGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349077.9
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGTCTCCCAGAGGCTTaGTCCGGGCCCCTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFCLPEA*SGPLRL
Trigger: CAACCTGAGGGGCCCGGACAAAGCCTCTGGGAGACA...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS-3UTR CAA 90 bp TTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATACCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LYSLDKGTSFMEEQFWVIPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...TATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCGCTCACATGTTCTCCTaGTCAAACTCACACATGAAG +
Preference number: 5 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTAHMFS*SNSHMK
Trigger: CTTCATGTGTGAGTTTGACAAGGAGAACATGTGAGC...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAGTGGGCAGATCACCTTaGCCACCTGATGTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIVGRSP*PPDVLL
Trigger: CAGCAGGACATCAGGTGGCAAAGGTGATCTGCCCAC...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATACCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGCGGGCTGAGCAGGGTTaGTCTTTCGTGGTGACTGTT +
Preference number: 5 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWRAEQG*SFVVTV
Trigger: AACAGTCACCACGAAAGACAAACCCTGCTCAGCCCG...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATATGCAGGACAGTCCACTaGGTTTCCAACAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYICRTVH*VSNSRA
Trigger: AGCCCTGCTGTTGGAAACCAAGTGGACTGTCCTGCA...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR CAA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCCCGGCGACAGCATTCTaGATGAACTTGAGCTCGCTG +
Preference number: 5 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFPATAF*MNLSSL
Trigger: CAGCGAGCTCAAGTTCATCAAGAATGCTGTCGCCGG...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp GACATTGGGGCTACAATACAGGTAATGAAACTCTGCTTCTTCAGAGACAGCACCTTCGTGGTGACTGTTTaGATCATGGGTTTGAATCTA +
Preference number: 5 (lower is better)
Translates to: DIGATIQVMKLCFFRDSTFVVTV*IMGLNL
Trigger: TAGATTCAAACCCATGATCAAAACAGTCACCACGAA...GGTGCTGTCTCTGAAGAAGCAGAGTTTCATTACCTGTATTGTAGCCCCAATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS-3UTR CAA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGACACCAACTCCTCTTaGTTTCTTCATCGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWDTNSS*FLHREG
Trigger: CCCTTCACGATGAAGAAACAAAGAGGAGTTGGTGTC...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS-3UTR CAA 90 bp CTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGGTAATAATTACATAGCTCACATGTTCTCCTaGTCAAACTCACACATGAAG +
Preference number: 5 (lower is better)
Translates to: LGQRHKLYGRAILGNNYIAHMFS*SNSHMK
Trigger: CTTCATGTGTGAGTTTGACAAGGAGAACATGTGAGC...TATGTAATTATTACCCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AAGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCGCTCACATGTTCTCCTaGTCAAACTCACACATGAAG +
Preference number: 5 (lower is better)
Translates to: KILLYSLDKGTSFMEEQFAHMFS*SNSHMK
Trigger: CTTCATGTGTGAGTTTGACAAGGAGAACATGTGAGC...GAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGCTCACATGTTCTCCTaGTCAAACTCACACATGAAG +
Preference number: 5 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSAHMFS*SNSHMK
Trigger: CTTCATGTGTGAGTTTGACAAGGAGAACATGTGAGC...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000416132.5
ENST00000418971.6
CDS-3UTR CAA 90 bp AGATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTCCCCATTGCCACTATTaGGACTTAACTACTGCACTA +
Preference number: 5 (lower is better)
Translates to: RFYCIAWTKAQALWKSNSPHCHY*DLTTAL
Trigger: TAGTGCAGTAGTTAAGTCCAAATAGTGGCAATGGGG...AGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349077.9
ENST00000382062.6
ENST00000418971.6
CDS-3UTR CAA 90 bp ATTTTATTGTATAGCTTGGACAAAGGCACAAGCTTTATGGAAGAGCAATTCTGGTCGAAGGGAAGTCATTaGAAATCCTTCTCCCAAATC +
Preference number: 5 (lower is better)
Translates to: ILLYSLDKGTSFMEEQFWSKGSH*KSFSQI
Trigger: GATTTGGGAGAAGGATTTCAAATGACTTCCCTTCGA...CCAGAATTGCTCTTCCATAAAGCTTGTGCCTTTGTCCAAGCTATACAATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418971.6
CDS CCA 72 bp GCACGCGCTAGGCGAACGGGGCGTCCTGCCCGTCGCTaGCCCGCGAGGACACTGCCCCCAGGCGCCTCATGG +
Preference number: 6 (lower is better)
Translates to: ARARRTGRPARR*PARTLPPGASW
Trigger: CCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCCAGCGACGGGCAGGACGCCCCGTTCGCCTAGCGCGTGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000382062.6
ENST00000419002.6
ENST00000460971.5
ENST00000487365.5
CDS GCA 72 bp GGCCCGCGAGGACACTGCCCCCAGGCGCCTCATGGCTaGTATTTAGAGAGGCGGCCGCAGTCCCAGGCGCAG +
Preference number: 6 (lower is better)
Translates to: GPRGHCPQAPHG*YLERRPQSQAQ
Trigger: CTGCGCCTGGGACTGCGGCCGCCTCTCTAAATAGCAGCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000382062.6
ENST00000419002.6
ENST00000460971.5
ENST00000487365.5
CDS GCA 72 bp CGGGGCGTCCTGCCCGTCGCTGGCCCGCGAGGACACTaGCCCCAGGCGCCTCATGGCTGCTATTTAGAGAGG +
Preference number: 6 (lower is better)
Translates to: RGVLPVAGPRGH*PQAPHGCYLER
Trigger: CCTCTCTAAATAGCAGCCATGAGGCGCCTGGGGGCAGTGTCCTCGCGGGCCAGCGACGGGCAGGACGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000236693.11
ENST00000382062.6
ENST00000419002.6
ENST00000460971.5
ENST00000487365.5
CDS GCA 72 bp GCCCGGCCGCAGCGTTATCTCGGGGAGCTTCCTGTCTaGGCTGCGTCCACCGTCCTGCCTGGGGAGTGTGGG +
Preference number: 6 (lower is better)
Translates to: ARPQRYLGELPV*AASTVLPGECG
Trigger: CCCACACTCCCCAGGCAGGACGGTGGACGCAGCGCAGACAGGAAGCTCCCCGAGATAACGCTGCGGCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382062.6
ENST00000419002.6
CDS CCA 72 bp GGAGCTTCCTGTCTGCGCTGCGTCCACCGTCCTGCCTaGGGAGTGTGGGAACGCCTGGAACTCCCTGAGGCC +
Preference number: 6 (lower is better)
Translates to: GASCLRCVHRPA*GVWERLELPEA
Trigger: GGCCTCAGGGAGTTCCAGGCGTTCCCACACTCCCCAGGCAGGACGGTGGACGCAGCGCAGACAGGAAGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382062.6
ENST00000419002.6
CDS CAA 90 bp GGCCGTCCGGGGGCGCCTTTGTCTCCCTTCTCTCCCGCATCCCCTTaGAGGCCAGGGACGAGGATCTGCACAGAGCAGGCGTCATCGCCA +
Preference number: 6 (lower is better)
Translates to: GRPGAPLSPFSPASP*RPGTRICTEQASSP
Trigger: TGGCGATGACGCCTGCTCTGTGCAGATCCTCGTCCCTGGCCTCAAAGGGGATGCGGGAGAGAAGGGAGACAAAGGCGCCCCCGGACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
ENST00000438814.5
CDS TCA 72 bp TTAGAACGCCCACCAGGGCCAGATTCCCCCTCATCCTaGGCGCAGGCAGGACACCAACTCCTGAGCACGCGC +
Preference number: 6 (lower is better)
Translates to: LERPPGPDSPSS*AQAGHQLLSTR
Trigger: GCGCGTGCTCAGGAGTTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000419002.6
ENST00000460971.5
ENST00000487365.5
CDS TCA 72 bp GGGACTCGGAGGCACCCACCACATTGGGCAGGGACGTaGCCTCCACAGCCAAAAGTCCAGCTCTCCACAGCC +
Preference number: 6 (lower is better)
Translates to: GTRRHPPHWAGT*PPQPKVQLSTA
Trigger: GGCTGTGGAGAGCTGGACTTTTGGCTGTGGAGGTCACGTCCCTGCCCAATGTGGTGGGTGCCTCCGAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS CAA 90 bp GGGCGCAGGGAAGACAACCGTAGGGACTCGGAGGCACCCACCACATaGGGCAGGGACGTGACCTCCACAGCCAAAAGTCCAGCTCTCCAC +
Preference number: 6 (lower is better)
Translates to: GRREDNRRDSEAPTT*GRDVTSTAKSPALH
Trigger: GTGGAGAGCTGGACTTTTGGCTGTGGAGGTCACGTCCCTGCCCAATGTGGTGGGTGCCTCCGAGTCCCTACGGTTGTCTTCCCTGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS TCA 72 bp AGGATCTGCACAGAGCAGGCGTCATCGCCAGCCGGCTaGGGATGTCCAGATGGCAGCAGTGACAGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: RICTEQASSPAG*GCPDGSSDRKA
Trigger: GGCCTTCCTGTCACTGCTGCCATCTGGACATCCTCAGCCGGCTGGCGATGACGCCTGCTCTGTGCAGATCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000416132.5
ENST00000418971.6
ENST00000419002.6
ENST00000438814.5
ENST00000460971.5
ENST00000487365.5
CDS GCA 72 bp GCTGAGAGACCTGGTTGTCCATCTCCCCGATGGCCTTaGGCAGCTGGCTGCACTCACATGGGAGGCCTGGTT +
Preference number: 6 (lower is better)
Translates to: AERPGCPSPRWP*AAGCTHMGGLV
Trigger: AACCAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACAACCAGGTCTCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
ENST00000460971.5
ENST00000487365.5
CDS CCA 72 bp ACCTGGTTGTCCATCTCCCCGATGGCCTTGCGCAGCTaGCTGCACTCACATGGGAGGCCTGGTTCTCCATTA +
Preference number: 6 (lower is better)
Translates to: TWLSISPMALRS*LHSHGRPGSPL
Trigger: TAATGGAGAACCAGGCCTCCCATGTGAGTGCAGCCAGCTGCGCAAGGCCATCGGGGAGATGGACAACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000236693.11
ENST00000349077.9
ENST00000382062.6
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
ENST00000418971.6
ENST00000460971.5
ENST00000487365.5
CDS CAA 72 bp GAAGACAACCGTAGGGACTCGGAGGCACCCACCACATaGGGCAGGGACGTGACCTCCACAGCCAAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: EDNRRDSEAPTT*GRDVTSTAKSP
Trigger: TGGACTTTTGGCTGTGGAGGTCACGTCCCTGCCCAATGTGGTGGGTGCCTCCGAGTCCCTACGGTTGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402794.4
ENST00000402922.2
ENST00000403096.7
ENST00000404205.5
CDS CAA 72 bp GGCCACTGGGCTTGTCTGGGCTGCAGGACAGTCCACTaGGTTTCCAACAGCAGGGCTAACACAGCCGGAAAA +
Preference number: 6 (lower is better)
Translates to: GHWACLGCRTVH*VSNSRANTAGK
Trigger: TTTTCCGGCTGTGTTAGCCCTGCTGTTGGAAACCAAGTGGACTGTCCTGCAGCCCAGACAAGCCCAGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS TCA 72 bp TTAGAACGCCCACCAGGGCCAGATTCCCCCTCATCCTaGGCGCAGGCAGGACACCAACTCCTCTTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: LERPPGPDSPSS*AQAGHQLLFVS
Trigger: AGAAACAAAGAGGAGTTGGTGTCCTGCCTGCGCTCAGGATGAGGGGGAATCTGGCCCTGGTGGGCGTTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418971.6
ENST00000438814.5
CDS GCA 72 bp CTGAGGTGGGCAGATCACCTTTGCCACCTGATGTCCTaGTGCACGAGGAGTTCTCCCAGAAATGTGTGGAGG +
Preference number: 6 (lower is better)
Translates to: LRWADHLCHLMS*CTRSSPRNVWR
Trigger: CCTCCACACATTTCTGGGAGAACTCCTCGTGCAGCAGGACATCAGGTGGCAAAGGTGATCTGCCCACCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418971.6
ENST00000438814.5
CDS GCA 72 bp AAGCACACCTTCCAAGCAGCCGTTCCTCCTCATCTCTaGGGTGCCGAAGGAGCTGGTTCTCCATTAGGACCA +
Preference number: 6 (lower is better)
Translates to: KHTFQAAVPPHL*GAEGAGSPLGP
Trigger: TGGTCCTAATGGAGAACCAGCTCCTTCGGCACCGCAGAGATGAGGAGGAACGGCTGCTTGGAAGGTGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416132.5
CDS CCA 72 bp GCCACTGGGCTTGTCTGGGCTGCAGGACAGTCCACTTaGTTTCCAACAGCAGGGCTAACACAGCCGGAAAAA +
Preference number: 6 (lower is better)
Translates to: ATGLVWAAGQST*FPTAGLTQPEK
Trigger: TTTTTCCGGCTGTGTTAGCCCTGCTGTTGGAAACCAAGTGGACTGTCCTGCAGCCCAGACAAGCCCAGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS GCA 72 bp AGGTGGGCAGATCACCTTTGCCACCTGATGTCCTGCTaGACGAGGAGTTCTCCCAGAAATGTGTGGAGGTCA +
Preference number: 6 (lower is better)
Translates to: RWADHLCHLMSC*TRSSPRNVWRS
Trigger: TGACCTCCACACATTTCTGGGAGAACTCCTCGTGCAGCAGGACATCAGGTGGCAAAGGTGATCTGCCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418971.6
ENST00000438814.5
CDS GCA 72 bp AGCCAATGGGACCAATTTTTCCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCCCCATGTCTCCCTGTG +
Preference number: 6 (lower is better)
Translates to: SQWDQFFHDDPH*LSVLCPPCLPV
Trigger: CACAGGGAGACATGGGGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATGGAAAAATTGGTCCCATTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS GCA 72 bp AGCCAATGGGACCAATTTTTCCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCCCCATGTCTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: SQWDQFFHDDPH*LSVLCPPCLLA
Trigger: TGCCAGGAGACATGGGGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATGGAAAAATTGGTCCCATTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402794.4
CDS TCA 72 bp CAGGCAGGACACCAACTCCTCTTTGTTTCTTCATCGTaGAGGGCGTTACAACTTGGAAAACAAGACCAGGCG +
Preference number: 6 (lower is better)
Translates to: QAGHQLLFVSSS*RALQLGKQDQA
Trigger: CGCCTGGTCTTGTTTTCCAAGTTGTAACGCCCTTCACGATGAAGAAACAAAGAGGAGTTGGTGTCCTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418971.6
ENST00000438814.5
CDS CCA 72 bp ATCACAATTAAAAGCACAAAGGCCACTGGGCTTGTCTaGGCTGCAGGACAGTCCACTTGGTTTCCAACAGCA +
Preference number: 6 (lower is better)
Translates to: ITIKSTKATGLV*AAGQSTWFPTA
Trigger: TGCTGTTGGAAACCAAGTGGACTGTCCTGCAGCCCAGACAAGCCCAGTGGCCTTTGTGCTTTTAATTGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7
CDS GCA 72 bp TGTCTCCCTGTGATCCCATTTCTACAAAGGACGAGGTaGACTTCCTTTTGGAGATGTCAGAAGCTGTCACGA +
Preference number: 6 (lower is better)
Translates to: CLPVIPFLQRTR*TSFWRCQKLSR
Trigger: TCGTGACAGCTTCTGACATCTCCAAAAGGAAGTGCACCTCGTCCTTTGTAGAAATGGGATCACAGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000236693.11
CDS GCA 72 bp AGCCAATGGGACCAATTTTTCCATGACGACCCACACTaGCTTTCTGTCCTTTGTCCCCCATGTCTCCTTTTT +
Preference number: 6 (lower is better)
Translates to: SQWDQFFHDDPH*LSVLCPPCLLF
Trigger: AAAAAGGAGACATGGGGGACAAAGGACAGAAAGGCAGTGTGGGTCGTCATGGAAAAATTGGTCCCATTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000349077.9
ENST00000403096.7
ENST00000416132.5
ENST00000418971.6
ENST00000438814.5
CDS CAA 72 bp CATTTATCACAATTAAAAGCACAAAGGCCACTGGGCTaGTCTGGGCTGCAGGACAGTCCACTTGGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: HLSQLKAQRPLG*SGLQDSPLGFQ
Trigger: TTGGAAACCAAGTGGACTGTCCTGCAGCCCAGACAAGCCCAGTGGCCTTTGTGCTTTTAATTGTGATAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403096.7