RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNTROB (Homo sapiens)

Ensembl gene IDs: ENSG00000170037

Ensembl transcript IDs: ENST00000380262.7, ENST00000563694.6, ENST00000565740.5, ENST00000570782.1, ENST00000570784.1, ENST00000571540.5, ENST00000571632.5, ENST00000573862.1, ENST00000575408.5, ENST00000576536.1, ENST00000576538.5, ENST00000576587.1, ENST00000576723.5, ENST00000576922.5

Found 474 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCCTTCCAGCCGCCGCACCTCAGACTGCACCAATGCCAACTGGTaGTGGGTCTCCCAGGCGGCCTGGGCTTCCCTCTGGCTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: SPSSRRTSDCTNANW*WVSQAAWASLWLFS
Trigger: GGAGAAGAGCCAGAGGGAAGCCCAGGCCGCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 90 bp CTCCGAGCTGTATCCAGCTCTCCTTCCAGCCGCCGCACCTCAGACTaGACCAATGCCAACTGGTGCTGGGTCTCCCAGGCGGCCTGGGCT +
Preference number: 1 (lower is better)
Translates to: LRAVSSSPSSRRTSD*TNANWCWVSQAAWA
Trigger: AGCCCAGGCCGCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGAGAGCTGGATACAGCTCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 90 bp AGCTCTCCTTCCAGCCGCCGCACCTCAGACTGCACCAATGCCAACTaGTGCTGGGTCTCCCAGGCGGCCTGGGCTTCCCTCTGGCTCTTC +
Preference number: 1 (lower is better)
Translates to: SSPSSRRTSDCTNAN*CWVSQAAWASLWLF
Trigger: GAAGAGCCAGAGGGAAGCCCAGGCCGCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGAGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 90 bp CCGAAGGCTGGTGTAGCGGGGAAACAGCTCCTCCAGGGCTTGGGCTaGGCTAGATGGAGACAAGTCTTGCAGGGGCCGGGTGCTGAGCAA +
Preference number: 1 (lower is better)
Translates to: PKAGVAGKQLLQGLG*ARWRQVLQGPGAEQ
Trigger: TTGCTCAGCACCCGGCCCCTGCAAGACTTGTCTCCATCTAGCTCAGCCCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACCAGCCTTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 90 bp AGAACAGGAGGCGCTCCAGGTAGCTCGTCCCTTGCTTCCCGGCTCTaGTGCAATACAGGCTTCAGGGCCACGGCCATGGGAGGCATAGTC +
Preference number: 1 (lower is better)
Translates to: RTGGAPGSSSLASRL*CNTGFRATAMGGIV
Trigger: GACTATGCCTCCCATGGCCGTGGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTGGAGCGCCTCCTGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 90 bp GCCCTCCCCGTCAGGTCCAGGATCTTCCTCAGGGAATGGCCTTTCTaGCCTATGATCGGGATGGAAGGCCCCAAGTGCAGAGAAGGCCCC +
Preference number: 1 (lower is better)
Translates to: ALPVRSRIFLREWPF*PMIGMEGPKCREGP
Trigger: GGGGCCTTCTCTGCACTTGGGGCCTTCCATCCCGATCATAGGGCAGAAAGGCCATTCCCTGAGGAAGATCCTGGACCTGACGGGGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 90 bp TCTGTCACCCGCTGCTCCAGCTGCACAGCCAGCTCCGACTCCAGCTaGATCCGCTGGCTTTCATACCGGGCCTGCACCAAGCTCATTTCC +
Preference number: 1 (lower is better)
Translates to: SVTRCSSCTASSDSS*IRWLSYRACTKLIS
Trigger: GGAAATGAGCTTGGTGCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGCAGCTGGAGCAGCGGGTGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 90 bp CCACCTCTCTCTGGGGAACCACTGCTGGGACCACTGCCTTGTGAATaGGAGGAGGGAGGCTCAGGGACCCGGAAAAGACTGGATGCCATG +
Preference number: 1 (lower is better)
Translates to: PPLSGEPLLGPLPCE*EEGGSGTRKRLDAM
Trigger: CATGGCATCCAGTCTTTTCCGGGTCCCTGAGCCTCCCTCCTCCCATTCACAAGGCAGTGGTCCCAGCAGTGGTTCCCCAGAGAGAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 90 bp CCGTCAGGTCCAGGATCTTCCTCAGGGAATGGCCTTTCTGCCCTATaGTCGGGATGGAAGGCCCCAAGTGCAGAGAAGGCCCCAGCTGTG +
Preference number: 1 (lower is better)
Translates to: PSGPGSSSGNGLSAL*SGWKAPSAEKAPAV
Trigger: CACAGCTGGGGCCTTCTCTGCACTTGGGGCCTTCCATCCCGATCATAGGGCAGAAAGGCCATTCCCTGAGGAAGATCCTGGACCTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 90 bp ATCTCCACCTCTCTCTGGGGAACCACTGCTGGGACCACTGCCTTGTaGATGGGAGGAGGGAGGCTCAGGGACCCGGAAAAGACTGGATGC +
Preference number: 1 (lower is better)
Translates to: ISTSLWGTTAGTTAL*MGGGRLRDPEKTGC
Trigger: GCATCCAGTCTTTTCCGGGTCCCTGAGCCTCCCTCCTCCCATTCACAAGGCAGTGGTCCCAGCAGTGGTTCCCCAGAGAGAGGTGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 90 bp TCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTCTTaGAGTCCCCTGAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTC +
Preference number: 1 (lower is better)
Translates to: SCCLLLVSSAAWCSS*SPLRTSVRSASCRF
Trigger: GAACCGGCATGAGGCTGAGCGGACAGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR TCA 90 bp CAGCCACCTGCTGTTGCCGTTCCTCTCGTTCTGCCATTTCCACCTTaGACTGAGCTAGCTGACTGGCCAGCTCCTGCTGGTGCTGTCCAC +
Preference number: 1 (lower is better)
Translates to: QPPAVAVPLVLPFPP*TELADWPAPAGAVH
Trigger: GTGGACAGCACCAGCAGGAGCTGGCCAGTCAGCTAGCTCAGTTCAAGGTGGAAATGGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 90 bp CAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTaGCTGGTGTTCCTCTTGAAGTCCCCTGAGAACCTCTGTCCGCTC +
Preference number: 1 (lower is better)
Translates to: QAGYCLLLLASGELC*LVFLLKSPENLCPL
Trigger: GAGCGGACAGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR TCA 90 bp GTGAGGTCTGGTTTGGGCTCCAGGGGCTGGAAAGAATGCTGGCTCTaGAAAGAGGGGCCCAACAGGAGGCTAAGATCTGAGGAGGAACTG +
Preference number: 1 (lower is better)
Translates to: VRSGLGSRGWKECWL*KEGPNRRLRSEEEL
Trigger: CAGTTCCTCCTCAGATCTTAGCCTCCTGTTGGGCCCCTCTTTTCAGAGCCAGCATTCTTTCCAGCCCCTGGAGCCCAAACCAGACCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 90 bp GTTGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATaGCCTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCT +
Preference number: 1 (lower is better)
Translates to: VAAVWHFPAHDSGPP*PQKGFVPGGLLSPA
Trigger: AGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR CCA 90 bp TGCCTTGTGAATGGGAGGAGGGAGGCTCAGGGACCCGGAAAAGACTaGATGCCATGGCTAAGGGAACTTTGGTTTTGTGGACAGGCGGTG +
Preference number: 1 (lower is better)
Translates to: CLVNGRREAQGPGKD*MPWLRELWFCGQAV
Trigger: CACCGCCTGTCCACAAAACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTTTCCGGGTCCCTGAGCCTCCCTCCTCCCATTCACAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTaGTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGCTTTGTTCC +
Preference number: 1 (lower is better)
Translates to: SSSVSLSRCCSLALS*SRFRASMASERLCS
Trigger: GGAACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR CCA 90 bp AATGGGAGGAGGGAGGCTCAGGGACCCGGAAAAGACTGGATGCCATaGCTAAGGGAACTTTGGTTTTGTGGACAGGCGGTGGAATACGTG +
Preference number: 1 (lower is better)
Translates to: NGRREAQGPGKDWMP*LRELWFCGQAVEYV
Trigger: CACGTATTCCACCGCCTGTCCACAAAACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTTTCCGGGTCCCTGAGCCTCCCTCCTCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 90 bp CCTCTTTCCGGGGGATCTCACCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCTGCTACACAAATCAA +
Preference number: 1 (lower is better)
Translates to: PLSGGSHPSGSLCSF*GHYPLGHQSCYTNQ
Trigger: TTGATTTGTGTAGCAGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAGATCCCCCGGAAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 90 bp AAGGGAACTTTGGTTTTGTGGACAGGCGGTGGAATACGTGGCACTTaGGGGGCTTCCTCCCAAGATGGGACAGTCAGAGGACCAGACTTA +
Preference number: 1 (lower is better)
Translates to: KGTLVLWTGGGIRGT*GASSQDGTVRGPDL
Trigger: TAAGTCTGGTCCTCTGACTGTCCCATCTTGGGAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAAACCAAAGTTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 90 bp CACGGGCCAGGGTCTTGTCCAGTTGTTCAATCATGGTATCTTTCTTaGGGTCGGCAGCCACAGCCACGGCTAATTGTTGCTGTAGCTCTA +
Preference number: 1 (lower is better)
Translates to: HGPGSCPVVQSWYLS*GRQPQPRLIVAVAL
Trigger: TAGAGCTACAGCAACAATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAGACCCTGGCCCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR GCA 90 bp CAGCGCCTGGTAGTGTTCCTTAAGCTGGTGCTCTTGCTGGGCCCAGGTCTGCCGTTGCCCAGCCCGAGCTaGATCCCGCTCTTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: QRLVVFLKLVLLLGPGLPLPSPS*IPLFLQ
Trigger: CTGCAGGAAGAGCGGGATGCAGCTCGGGCTGGGCAA...CGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACACTACCAGGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR TCA 90 bp GCACAGCCAGCTCCGACTCCAGCTGGATCCGCTGGCTTTCATACCGGGCCTGCAGCTGCTTGCTTCTGGTaGGCTCTGCTGCCTGGTGTT +
Preference number: 2 (lower is better)
Translates to: AQPAPTPAGSAGFHTGPAAACFW*ALLPGV
Trigger: AACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGC...TGCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CAA 90 bp AGGAGGAACTGCAAAGAACAGGAGGCGCTCCAGGTAGCTCGTCCCTaGCTTCCCGGCTCTGCTGCAATACAGGCTTCAGGGCCACGGCCA +
Preference number: 2 (lower is better)
Translates to: RRNCKEQEALQVARP*LPGSAAIQASGPRP
Trigger: TGGCCGTGGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTGGAGCGCCTCCTGTTCTTTGCAGTTCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR CCA 90 bp GGAGGCGCTCCAGGTAGCTCGTCCCTTGCTTCCCGGCTCTGCTGCAATACAGGCCCCGTTGCTGCAGTCTaGCACTTTCCTGCTCACGAT +
Preference number: 2 (lower is better)
Translates to: GGAPGSSSLASRLCCNTGPVAAV*HFPAHD
Trigger: ATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGG...GCCTGTATTGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTGGAGCGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR TCA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGGCCTGGTGTTCCTCTTaGAGTCCCCTGAGAACCTCT +
Preference number: 2 (lower is better)
Translates to: GQPEESPTLDAHSVAQPEAWCSS*SPLRTS
Trigger: AGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGC...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR-3UTR TCA 90 bp TCCTTCCAGCCGCCGCACCTCAGACTGCACCAATGCCAACTGGTGCTGGGTCTCGCCTGGTGTTCCTCTTaGAGTCCCCTGAGAACCTCT +
Preference number: 2 (lower is better)
Translates to: SFQPPHLRLHQCQLVLGLAWCSS*SPLRTS
Trigger: AGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGC...GAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CAA 90 bp CTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTCTaGAAGTCCCCTGAGAACCTCTGTCCGCTCAGCCTCATGCCGGTT +
Preference number: 2 (lower is better)
Translates to: LLLLASGELCCLVFL*KSPENLCPLSLMPV
Trigger: AACCGGCATGAGGCTGAGCGGACAGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR-3UTR GCA 90 bp CTCACCCAAGCGGGAGTCTGTGTTCCTTCTGGGGACATTATCCCCTCGGCCATCGCACCGCTGCTGTTCTaGCTCCAACCTCAGAGTCAG +
Preference number: 2 (lower is better)
Translates to: LTQAGVCVPSGDIIPSAIAPLLF*LQPQSQ
Trigger: CTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGC...GATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR CCA 90 bp GCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCAGCTCCTCCAGGGCTTaGGCTGAGCTAGATGGAGAC +
Preference number: 2 (lower is better)
Translates to: AGYCLLLLASGELCCLVFSSSRA*AELDGD
Trigger: GTCTCCATCTAGCTCAGCCCAAGCCCTGGAGGAGCT...GAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR TCA 90 bp CGTAGTCCTCAGCCACCTGCTGTTGCCGTTCCTCTCGTTCTGCCATTTCCACCTCTCCAGGGCTTGGGCTaGGCTAGATGGAGACAAGTC +
Preference number: 2 (lower is better)
Translates to: RSPQPPAVAVPLVLPFPPLQGLG*ARWRQV
Trigger: GACTTGTCTCCATCTAGCTCAGCCCAAGCCCTGGAG...AGGTGGAAATGGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTGAGGACTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR TCA 90 bp CCTCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACCGGGTCTGCAGGCTCTaGATATGGCGCTCACAATGC +
Preference number: 2 (lower is better)
Translates to: PPPVSLFPVAAVWHFPAHRVCRL*IWRSQC
Trigger: GCATTGTGAGCGCCATATTCAGAGCCTGCAGACCCG...GTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR TCA 90 bp TATGATCGGGATGGAAGGCCCCAAGTGCAGAGAAGGCCCCAGCTGTGGATGAAGCCTCTTGAAGTCCCCTaGGAACCTCTGTCCGCTCAG +
Preference number: 2 (lower is better)
Translates to: YDRDGRPQVQRRPQLWMKPLEVP*EPLSAQ
Trigger: CTGAGCGGACAGAGGTTCTCAGGGGACTTCAAGAGG...CTTCATCCACAGCTGGGGCCTTCTCTGCACTTGGGGCCTTCCATCCCGATCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR CCA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGAATCTGGGGGATTGAGTaGAGGCCCTGGCCGAAGGCT +
Preference number: 2 (lower is better)
Translates to: SSSVSLSRCCSLALSCSRIWGIE*RPWPKA
Trigger: AGCCTTCGGCCAGGGCCTCCACTCAATCCCCCAGAT...TCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR GCA 90 bp TTTGGTTTTGTGGACAGGCGGTGGAATACGTGGCACTTGAGGGGCTTCCTCCCATTAAGCTGGTGCTCTTaGTGGGCCCAGGTCTGCCGT +
Preference number: 2 (lower is better)
Translates to: FGFVDRRWNTWHLRGFLPLSWCS*WAQVCR
Trigger: ACGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAA...TGGGAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAAACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR GCA 90 bp CCGAGCCTGGTAGAGTCGCAACAGTTGAGACACCTCCATCAGCTGCCTTGGGAACTCAGACTGCACCAATaGCAACTGGTGCTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: PSLVESQQLRHLHQLPWELRLHQ*QLVLGL
Trigger: GAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAG...TTCCCAAGGCAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTACCAGGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR GCA 90 bp TTTGGTTTTGTGGACAGGCGGTGGAATACGTGGCACTTGAGGGGCTTCCTCCCATCAGCCACCTGCTGTTaGCGTTCCTCTCGTTCTGCC +
Preference number: 2 (lower is better)
Translates to: FGFVDRRWNTWHLRGFLPSATCC*RSSRSA
Trigger: GGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTGA...TGGGAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAAACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR GCA 90 bp CCGAGCCTGGTAGAGTCGCAACAGTTGAGACACCTCCATCAGCTGCCTTGGGAACTTGCTTCCCGGCTCTaGTGCAATACAGGCTTCAGG +
Preference number: 2 (lower is better)
Translates to: PSLVESQQLRHLHQLPWELASRL*CNTGFR
Trigger: CCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAG...TTCCCAAGGCAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTACCAGGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CAA 90 bp ACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGCTTaGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAG +
Preference number: 2 (lower is better)
Translates to: TFLLTIQGLHGLRKA*FQAGYCLLLLASGE
Trigger: CTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR-3UTR TCA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGAGCGGCGGGTATGCTCTaGATCCAATGCATCTCTCAG +
Preference number: 2 (lower is better)
Translates to: SSSVSLSRCCSLALSCSRAAGML*IQCISQ
Trigger: CTGAGAGATGCATTGGATTCAGAGCATACCCGCCGC...TCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR TCA 90 bp GCCATCAGTCCTGCTACACAAATCAAAGGTATGAGGATGGGGATCTCCGTCCCCTGCAGCTGCTTCCTGTaGTGTTCCCTGAGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: AISPATQIKGMRMGISVPCSCFL*CSLREA
Trigger: AGCCTCCCTCAGGGAACATCACAGGAAGCAGCTGCA...GGGGACGGAGATCCCCATCCTCATACCTTTGATTTGTGTAGCAGGACTGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR GCA 90 bp GGAGGCTCAGGGACCCGGAAAAGACTGGATGCCATGGCTAAGGGAACTTTGGTTTGTTCCTTAAGCTGGTaGTCTTGCTGGGCCCAGGTC +
Preference number: 2 (lower is better)
Translates to: GGSGTRKRLDAMAKGTLVCSLSW*SCWAQV
Trigger: GACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACA...AACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTTTCCGGGTCCCTGAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR CCA 90 bp CCGAGCCTGGTAGAGTCGCAACAGTTGAGACACCTCCATCAGCTGCCTTGGGAAGATTCAGGGCCTCCATaGCCTCAGAAAGGCTTTGTT +
Preference number: 2 (lower is better)
Translates to: PSLVESQQLRHLHQLPWEDSGPP*PQKGFV
Trigger: AACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATC...TTCCCAAGGCAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTACCAGGCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CAA 90 bp ACACGGGCCAGGGTCTTGTCCAGTTGTTCAATCATGGTATCTTTCTaGCGGTCGGCAGCCACAGCCACGGCTAATTGTTGCTGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: TRARVLSSCSIMVSF*RSAATATANCCCSS
Trigger: AGAGCTACAGCAACAATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAGACCCTGGCCCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR TCA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGGCATCTCTCAGCCCCTaGAAATCTGGGGGATTGAGT +
Preference number: 2 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVASLSP*KSGGLS
Trigger: ACTCAATCCCCCAGATTTTCAGGGGCTGAGAGATGC...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR GCA 90 bp GCCATCAGTCCTGCTACACAAATCAAAGGTATGAGGATGGGGATCTCCGTCCCCTCATGGTATCTTTCTTaGGGTCGGCAGCCACAGCCA +
Preference number: 2 (lower is better)
Translates to: AISPATQIKGMRMGISVPSWYLS*GRQPQP
Trigger: TGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGA...GGGGACGGAGATCCCCATCCTCATACCTTTGATTTGTGTAGCAGGACTGATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR GCA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGCCACGGCTAATTGTTaGTGTAGCTCTAACACTCGG +
Preference number: 2 (lower is better)
Translates to: LRKALFQAGYCLLLLASGATANC*CSSNTR
Trigger: CCGAGTGTTAGAGCTACAGCAACAATTAGCCGTGGC...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR TCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCATGAGCCAGAGACTCTaGTACAGACTAATGAGCATT +
Preference number: 2 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVMSQRL*YRLMSI
Trigger: AATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCAT...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
3UTR-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGTTTTCCAAATTCCTATaGGCCAGAGACTCTGATACA +
Preference number: 2 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKFSKFL*ARDSDT
Trigger: TGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAA...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
3UTR-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGGGTTTCTTTACGAAGTaGTTCCCTACAAAACCTCTA +
Preference number: 2 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKGFFTK*FPTKPL
Trigger: TAGAGGTTTTGTAGGGAATCACTTCGTAAAGAAACC...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
3UTR GCA 72 bp GCCTGCGCCAGCCGCTCTGTCACCCGCTGCTCCAGCTaGACAGCCAGCTCCGACTCCAGCTGGATCCGCTGG +
Preference number: 3 (lower is better)
Translates to: ACASRSVTRCSS*TASSDSSWIRW
Trigger: CCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGCAGCTGGAGCAGCGGGTGACAGAGCGGCTGGCGCAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 72 bp AGCCGCCGCACCTCAGACTGCACCAATGCCAACTGGTaGTGGGTCTCCCAGGCGGCCTGGGCTTCCCTCTGG +
Preference number: 3 (lower is better)
Translates to: SRRTSDCTNANW*WVSQAAWASLW
Trigger: CCAGAGGGAAGCCCAGGCCGCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 72 bp CTCTCCTTCCAGCCGCCGCACCTCAGACTGCACCAATaGCAACTGGTGCTGGGTCTCCCAGGCGGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LSFQPPHLRLHQ*QLVLGLPGGLG
Trigger: GCCCAGGCCGCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 72 bp GGCGCTCCAGGTAGCTCGTCCCTTGCTTCCCGGCTCTaGTGCAATACAGGCTTCAGGGCCACGGCCATGGGA +
Preference number: 3 (lower is better)
Translates to: GAPGSSSLASRL*CNTGFRATAMG
Trigger: TCCCATGGCCGTGGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTGGAGCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 72 bp GTATCCAGCTCTCCTTCCAGCCGCCGCACCTCAGACTaGACCAATGCCAACTGGTGCTGGGTCTCCCAGGCG +
Preference number: 3 (lower is better)
Translates to: VSSSPSSRRTSD*TNANWCWVSQA
Trigger: CGCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGAGAGCTGGATAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp GGTGTAGCGGGGAAACAGCTCCTCCAGGGCTTGGGCTaGGCTAGATGGAGACAAGTCTTGCAGGGGCCGGGT +
Preference number: 3 (lower is better)
Translates to: GVAGKQLLQGLG*ARWRQVLQGPG
Trigger: ACCCGGCCCCTGCAAGACTTGTCTCCATCTAGCTCAGCCCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 72 bp TCTTCTAGGGCAGCCCGAAGAGTCTCCAACTCTCGATaGTCACTCAGTTGCCCAGCCCGAGCTGCATCCCGC +
Preference number: 3 (lower is better)
Translates to: SSRAARRVSNSR*SLSCPARAASR
Trigger: GCGGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCCTAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR-3UTR CAA 90 bp GCACAGCCAGCTCCGACTCCAGCTGGATCCGCTGGCTTTCATACCGGGCCTGCAACACGGGCCAGGGTCTaGTCCAGTTGTTCAATCATG +
Preference number: 3 (lower is better)
Translates to: AQPAPTPAGSAGFHTGPATRARV*SSCSIM
Trigger: CATGATTGAACAACTGGACAAGACCCTGGCCCGTGT...TGCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 72 bp GGGGGATCTCACCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCTGCTAC +
Preference number: 3 (lower is better)
Translates to: GGSHPSGSLCSF*GHYPLGHQSCY
Trigger: GTAGCAGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAGATCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp CCAGGATCTTCCTCAGGGAATGGCCTTTCTGCCCTATaGTCGGGATGGAAGGCCCCAAGTGCAGAGAAGGCC +
Preference number: 3 (lower is better)
Translates to: PGSSSGNGLSAL*SGWKAPSAEKA
Trigger: GGCCTTCTCTGCACTTGGGGCCTTCCATCCCGATCATAGGGCAGAAAGGCCATTCCCTGAGGAAGATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 72 bp CCTCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTaGCACTTTCCTGCTCACGATTCAGGGCCTCCATGG +
Preference number: 3 (lower is better)
Translates to: PPPVSLFPVAAV*HFPAHDSGPPW
Trigger: CCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR TCA 72 bp CGGGTATGCTCTGAATCCAATGCATCTCTCAGCCCCTaGAAATCTGGGGGATTGAGTGGAGGCCCTGGCCGA +
Preference number: 3 (lower is better)
Translates to: RVCSESNASLSP*KSGGLSGGPGR
Trigger: TCGGCCAGGGCCTCCACTCAATCCCCCAGATTTTCAGGGGCTGAGAGATGCATTGGATTCAGAGCATACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp GCTGTTGCCGTTCCTCTCGTTCTGCCATTTCCACCTTaGACTGAGCTAGCTGACTGGCCAGCTCCTGCTGGT +
Preference number: 3 (lower is better)
Translates to: AVAVPLVLPFPP*TELADWPAPAG
Trigger: ACCAGCAGGAGCTGGCCAGTCAGCTAGCTCAGTTCAAGGTGGAAATGGCAGAACGAGAGGAACGGCAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp GCTCTGAAAAGAGGGGCCCAACAGGAGGCTAAGATCTaGGGAGGAACTGCAAAGAACAGGAGGCGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: ALKRGAQQEAKI*GGTAKNRRRSR
Trigger: CCTGGAGCGCCTCCTGTTCTTTGCAGTTCCTCCTCAGATCTTAGCCTCCTGTTGGGCCCCTCTTTTCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp GGTTTGGGCTCCAGGGGCTGGAAAGAATGCTGGCTCTaGAAAGAGGGGCCCAACAGGAGGCTAAGATCTGAG +
Preference number: 3 (lower is better)
Translates to: GLGSRGWKECWL*KEGPNRRLRSE
Trigger: CTCAGATCTTAGCCTCCTGTTGGGCCCCTCTTTTCAGAGCCAGCATTCTTTCCAGCCCCTGGAGCCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 72 bp GTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTaGTCACGATTCAGGGCCTCCATGGCCTCAGAAAGG +
Preference number: 3 (lower is better)
Translates to: VSLSRCCSLALS*SRFRASMASER
Trigger: CCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR GCA 72 bp TGCCTTTCCTCCTCCAGTGTCTCTCTTTCCCGTTGCTaGAGTCTGGCACTTTCCTGCTCACGATTCAGGGCC +
Preference number: 3 (lower is better)
Translates to: CLSSSSVSLSRC*SLALSCSRFRA
Trigger: GGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGGAAAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR GCA 72 bp GTCAGGTCCAGGATCTTCCTCAGGGAATGGCCTTTCTaGCCTATGATCGGGATGGAAGGCCCCAAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: VRSRIFLREWPF*PMIGMEGPKCR
Trigger: TCTGCACTTGGGGCCTTCCATCCCGATCATAGGGCAGAAAGGCCATTCCCTGAGGAAGATCCTGGACCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 72 bp GTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATaGCCTCAGAAAGGCTTTGTTCCAGGCGGGTTACTG +
Preference number: 3 (lower is better)
Translates to: VWHFPAHDSGPP*PQKGFVPGGLL
Trigger: CAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR CCA 72 bp TGGAATACGTGGCACTTGAGGGGCTTCCTCCCAAGATaGGACAGTCAGAGGACCAGACTTAGGGGGCAACAG +
Preference number: 3 (lower is better)
Translates to: WNTWHLRGFLPR*DSQRTRLRGQQ
Trigger: CTGTTGCCCCCTAAGTCTGGTCCTCTGACTGTCCCATCTTGGGAGGAAGCCCCTCAAGTGCCACGTATTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp TGTTGCTGTAGCTCTAACACTCGGGTCTGCAGGCTCTaGATATGGCGCTCACAATGCTTGCGGCGGGTATGC +
Preference number: 3 (lower is better)
Translates to: CCCSSNTRVCRL*IWRSQCLRRVC
Trigger: GCATACCCGCCGCAAGCATTGTGAGCGCCATATTCAGAGCCTGCAGACCCGAGTGTTAGAGCTACAGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp TTGGTTTTGTGGACAGGCGGTGGAATACGTGGCACTTaGGGGGCTTCCTCCCAAGATGGGACAGTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: LVLWTGGGIRGT*GASSQDGTVRG
Trigger: TCCTCTGACTGTCCCATCTTGGGAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 72 bp GCTTGCCTTTCCTCCTCCAGTGTCTCTCTTTCCCGTTaGTGCAGTCTGGCACTTTCCTGCTCACGATTCAGG +
Preference number: 3 (lower is better)
Translates to: ACLSSSSVSLSR*CSLALSCSRFR
Trigger: CCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGGAAAGGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR CCA 72 bp GGGAACTTTGGTTTTGTGGACAGGCGGTGGAATACGTaGCACTTGAGGGGCTTCCTCCCAAGATGGGACAGT +
Preference number: 3 (lower is better)
Translates to: GNFGFVDRRWNT*HLRGFLPRWDS
Trigger: ACTGTCCCATCTTGGGAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAAACCAAAGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR CAA 90 bp GCCATCAGTCCTGCTACACAAATCAAAGGTATGAGGATGGGGATCTCCGTCCCCACTGTCTCCTGCTGCTaGCTTCTGGTGAGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: AISPATQIKGMRMGISVPTVSCC*LLVSSA
Trigger: AGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGT...GGGGACGGAGATCCCCATCCTCATACCTTTGATTTGTGTAGCAGGACTGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp AAATCAGCGTCAGATCCTCTCAATTCCCCACCCCACTaGGGAAATGCACGTGGAGAGGGCCAGATGAGTCTG +
Preference number: 3 (lower is better)
Translates to: KSASDPLNSPPH*GNARGEGQMSL
Trigger: CAGACTCATCTGGCCCTCTCCACGTGCATTTCCTCAGTGGGGTGGGGAATTGAGAGGATCTGACGCTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CCA 72 bp AATGGGAGGAGGGAGGCTCAGGGACCCGGAAAAGACTaGATGCCATGGCTAAGGGAACTTTGGTTTTGTGGA +
Preference number: 3 (lower is better)
Translates to: NGRREAQGPGKD*MPWLRELWFCG
Trigger: TCCACAAAACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTTTCCGGGTCCCTGAGCCTCCCTCCTCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR CAA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTACACGGGCCAGGGTCTaGTCCAGTTGTTCAATCATG +
Preference number: 3 (lower is better)
Translates to: LRKALFQAGYCLLLLASGTRARV*SSCSIM
Trigger: CATGATTGAACAACTGGACAAGACCCTGGCCCGTGT...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR CCA 72 bp CCCGGAAAAGACTGGATGCCATGGCTAAGGGAACTTTaGTTTTGTGGACAGGCGGTGGAATACGTGGCACTT +
Preference number: 3 (lower is better)
Translates to: PGKDWMPWLREL*FCGQAVEYVAL
Trigger: AAGTGCCACGTATTCCACCGCCTGTCCACAAAACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTTTCCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR-3UTR CAA 90 bp GAGGAAGAAATCAGCGTCAGATCCTCTCAATTCCCCACCCCACTGAGGAAATGCGTAGAGTCGCAACAGTaGAGACACCTCCATCAGCTG +
Preference number: 3 (lower is better)
Translates to: EEEISVRSSQFPTPLRKCVESQQ*RHLHQL
Trigger: CAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTAC...GCATTTCCTCAGTGGGGTGGGGAATTGAGAGGATCTGACGCTGATTTCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR TCA 72 bp AATATGGCGCTCACAATGCTTGCGGCGGGTATGCTCTaGATCCAATGCATCTCTCAGCCCCTGAAAATCTGG +
Preference number: 3 (lower is better)
Translates to: NMALTMLAAGML*IQCISQPLKIW
Trigger: CCAGATTTTCAGGGGCTGAGAGATGCATTGGATTCAGAGCATACCCGCCGCAAGCATTGTGAGCGCCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR GCA 72 bp GGGTCTTGTCCAGTTGTTCAATCATGGTATCTTTCTTaGGGTCGGCAGCCACAGCCACGGCTAATTGTTGCT +
Preference number: 3 (lower is better)
Translates to: GSCPVVQSWYLS*GRQPQPRLIVA
Trigger: AGCAACAATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
3UTR TCA 72 bp AGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCACTaGATCTTAGCCGCCCCAACTTTCCAAATCTTGTCA +
Preference number: 3 (lower is better)
Translates to: RVHCSAGFSFVH*ILAAPTFQILS
Trigger: TGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAGCTAAAACCTGCAGAGCAATGAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
3UTR CCA 72 bp AGAATAAGATCAAACTCGATAGACCTGGGCATCAACTaGGAGGAGACATTAGTGGAAGTAAATAACGAGTTA +
Preference number: 3 (lower is better)
Translates to: RIRSNSIDLGIN*EETLVEVNNEL
Trigger: TAACTCGTTATTTACTTCCACTAATGTCTCCTCCCAGTTGATGCCCAGGTCTATCGAGTTTGATCTTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCACACGGGCGCAGGCGGCAGCCCTTaGTTTAGGAGGCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ENLCPLSLMPVPALHHTGAGGSP*FRRPSP
Trigger: CGGGGAGGGCCTCCTAAAGCAAGGGCTGCCGCCTGC...GCCCGTGTGGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GCGGGAGGTTTTTCAGTCTTGGGGGCTGTAGCAAGGCGGCGAGGGACAGCCTGGGTCCGCTCAGCCTCATaGCGGTTCCAGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: AGGFSVLGAVARRRGTAWVRSAS*RFQPST
Trigger: GGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGAC...CCAGGCTGTCCCTCGCCGCCTTGCTACAGCCCCCAAGACTGAAAAACCTCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCACACGGGCTTGCCCAGCCCGAGCTaGATCCCGCTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ENLCPLSLMPVPALHHTGLPSPS*IPLFLQ
Trigger: CTGCAGGAAGAGCGGGATGCAGCTCGGGCTGGGCAA...GCCCGTGTGGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CCTTGCTTCCCGGCTCTGCTGCAATACAGGCTTCAGGGCCACGGCCATGGGAGGACCAATGCCAACTGGTaGTGGGTCTCCCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: PCFPALLQYRLQGHGHGRTNANW*WVSQAA
Trigger: GGCCGCCTGGGAGACCCAGCACCAGTTGGCATTGGT...CCTCCCATGGCCGTGGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp GAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCACACGGGCAGCTGGTGCTCTTGCTaGGCCCAGGTCTGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ENLCPLSLMPVPALHHTGSWCSC*AQVCRS
Trigger: AGAACGGCAGACCTGGGCCCAGCAAGAGCACCAGCT...GCCCGTGTGGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp GAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCACACGGGCAGTGGGGGAGTGGGCTaGAGCCAAGAAGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: ENLCPLSLMPVPALHHTGSGGVG*SQEAWV
Trigger: GACCCAAGCTTCTTGGCTCCAGCCCACTCCCCCACT...GCCCGTGTGGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCCGTCTAACCCTTCATaGGGCGGGGAGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GQPEESPTLDAHSVAQPEPSNPS*GGEVEG
Trigger: ACCCTCCACCTCCCCGCCTCATGAAGGGTTAGACGG...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp GAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCACACGGGCGCTGCTTGCTTCTGGTaGGCTCTGCTGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ENLCPLSLMPVPALHHTGAACFW*ALLPGV
Trigger: AACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGC...GCCCGTGTGGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCGCCGTGGCCTCCGCCTaGCGGCTGAGGCGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPAVASA*RLRRKE
Trigger: TTCTTTGCGCCTCAGCCGGCAGGCGGAGGCCACGGC...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR GCA 90 bp GAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCACACGGGCTTAAGCTGGTGCTCTTaGTGGGCCCAGGTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ENLCPLSLMPVPALHHTGLSWCS*WAQVCR
Trigger: ACGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAA...GCCCGTGTGGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CAGCGCCTGGTAGTGTTCCTTAAGCTGGTGCTCTTGCTGGGCCCAGGTCTGCCGCTGCTTGCCGTAGGCTaGTCTCCTGAGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: QRLVVFLKLVLLLGPGLPLLAVG*SPEPAP
Trigger: TGGCGCAGGCTCAGGAGAGCAGCCTACGGCAAGCAG...CGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACACTACCAGGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CAGCGCCTGGTAGTGTTCCTTAAGCTGGTGCTCTTGCTGGGCCCAGGTCTGCCGGCCAGCTCCTGCTGGTaGTGTCCACTCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: QRLVVFLKLVLLLGPGLPASSCW*CPLRSC
Trigger: GCAGGACCTGAGTGGACAGCACCAGCAGGAGCTGGC...CGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACACTACCAGGCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GCGGGAGGTTTTTCAGTCTTGGGGGCTGTAGCAAGGCGGCGAGGGACAGCCTGGCTACTCGGGGCAGGGTaGCCACTTTTCTTCCGTGCG +
Preference number: 4 (lower is better)
Translates to: AGGFSVLGAVARRRGTAWLLGAG*PLFFRA
Trigger: CGCACGGAAGAAAAGTGGGCACCCTGCCCCGAGTAG...CCAGGCTGTCCCTCGCCGCCTTGCTACAGCCCCCAAGACTGAAAAACCTCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp GAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCACACGGGCACTGAGCTAGCTGACTaGCCAGCTCCTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ENLCPLSLMPVPALHHTGTELAD*PAPAGA
Trigger: AGCACCAGCAGGAGCTGGCCAGTCAGCTAGCTCAGT...GCCCGTGTGGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp TATGATCGGGATGGAAGGCCCCAAGTGCAGAGAAGGCCCCAGCTGTGGATGAAGCCTGAGGCCCGGGGCTaGAGGGTCCAGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YDRDGRPQVQRRPQLWMKPEARG*RVQQEE
Trigger: CTCCTCCTGCTGGACCCTCCAGCCCCGGGCCTCAGG...CTTCATCCACAGCTGGGGCCTTCTCTGCACTTGGGGCCTTCCATCCCGATCATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp GGAGGCGCTCCAGGTAGCTCGTCCCTTGCTTCCCGGCTCTGCTGCAATACAGGCCTCCAGGGCTTGGGCTaGGCTAGATGGAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: GGAPGSSSLASRLCCNTGLQGLG*ARWRQV
Trigger: GACTTGTCTCCATCTAGCTCAGCCCAAGCCCTGGAG...GCCTGTATTGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTGGAGCGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp GCACAGCCAGCTCCGACTCCAGCTGGATCCGCTGGCTTTCATACCGGGCCTGCATGCAGCTGCTTCCTGTaGTGTTCCCTGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AQPAPTPAGSAGFHTGPACSCFL*CSLREA
Trigger: AGCCTCCCTCAGGGAACATCACAGGAAGCAGCTGCA...TGCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp TTTGGTTTTGTGGACAGGCGGTGGAATACGTGGCACTTGAGGGGCTTCCTCCCATCCTTCTCGGGCTCCTaGGGCCCGGGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: FGFVDRRWNTWHLRGFLPSFSGS*GPGLEG
Trigger: ACCCTCCAGCCCCGGGCCTCAGGAGCCCGAGAAGGA...TGGGAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAAACCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp CCTCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACTTGAGGCCCTCCAGCTaGGCAGGCGGCAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PPPVSLFPVAAVWHFPAHLRPSS*AGGSPC
Trigger: GCAAGGGCTGCCGCCTGCTCAGCTGGAGGGCCTCAA...GTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp CCTTGCTTCCCGGCTCTGCTGCAATACAGGCTTCAGGGCCACGGCCATGGGAGGGCAGGGGCCGGGTGCTaGGCAAATCAGGTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: PCFPALLQYRLQGHGHGRAGAGC*ANQVEN
Trigger: ATTCTCTACCTGATTTGCTCAGCACCCGGCCCCTGC...CCTCCCATGGCCGTGGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp TCCTTCCAGCCGCCGCACCTCAGACTGCACCAATGCCAACTGGTGCTGGGTCTCGCTTCCCGGCTCTGCTaGAATACAGGCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SFQPPHLRLHQCQLVLGLASRLC*NTGFRA
Trigger: GGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGC...GAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GCACAGCCAGCTCCGACTCCAGCTGGATCCGCTGGCTTTCATACCGGGCCTGCACACTGCTGGGACCACTaGCTTGTGAATGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AQPAPTPAGSAGFHTGPAHCWDH*LVNGRR
Trigger: CCTCCTCCCATTCACAAGGCAGTGGTCCCAGCAGTG...TGCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp TCCTTCCAGCCGCCGCACCTCAGACTGCACCAATGCCAACTGGTGCTGGGTCTCGGCCAGCCAGGAGTGTaGAGAGGTGAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SFQPPHLRLHQCQLVLGLGQPGV*RGEGAG
Trigger: ACCAGCTCCTTCACCTCTGCACACTCCTGGCTGGCC...GAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTGGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGATTGAGTGGAGGCCCTaGCCGAAGGCTGGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: GQPEESPTLDAHSVAQPEIEWRP*PKAGVA
Trigger: CGCTACACCAGCCTTCGGCCAGGGCCTCCACTCAAT...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp AGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCGCTCAGCCAGCGCCAGGAATaGGAGGATCCCGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: SLQLSMLTQLPSPSCIPLSQRQE*EDPDRL
Trigger: CAGCCTATCGGGATCCTCTCATTCCTGGCGCTGGCT...GAGCGGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCGGGTCTGCAGGCTCTaGATATGGCGCTCACAATGC +
Preference number: 4 (lower is better)
Translates to: GQPEESPTLDAHSVAQPERVCRL*IWRSQC
Trigger: GCATTGTGAGCGCCATATTCAGAGCCTGCAGACCCG...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp GCGGGAGGTTTTTCAGTCTTGGGGGCTGTAGCAAGGCGGCGAGGGACAGCCTGGGCCTGGTGTTCCTCTTaGAGTCCCCTGAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: AGGFSVLGAVARRRGTAWAWCSS*SPLRTS
Trigger: AGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGC...CCAGGCTGTCCCTCGCCGCCTTGCTACAGCCCCCAAGACTGAAAAACCTCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAGTCCGCTCAGCCTCATaGCGGTTCCAGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASEVRSAS*RFQPST
Trigger: GGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGAC...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCACACGGGCTCTGGTGAGCTCTGCTaGCTGGTGTTCCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: ENLCPLSLMPVPALHHTGSGELC*LVFLLK
Trigger: CTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGA...GCCCGTGTGGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp AGTCCCCTGAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCAGTCTGGCACTTTCCTaGTCACGATTCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SPLRTSVRSASCRFQPSTSLALS*SRFRAS
Trigger: GGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACT...GGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTCAGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATGCATCCCGCTCTTCCTaGAGGACACAGCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: PEESPTLDAHSVAQPELHASRSS*RTQHRC
Trigger: GCAGCGGTGCTGTGTCCTGCAGGAAGAGCGGGATGC...ATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GGAGGCGCTCCAGGTAGCTCGTCCCTTGCTTCCCGGCTCTGCTGCAATACAGGCACCCCACTGAGGAAATaGACGTGGAGAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GGAPGSSSLASRLCCNTGTPLRK*TWRGPD
Trigger: ATCTGGCCCTCTCCACGTGCATTTCCTCAGTGGGGT...GCCTGTATTGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTGGAGCGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp CTTCCTGCAGGACACAGCACCGCTGCTGTTCTGCCTCCAACCTCAGAGTCAGAGGAGGGTAAATACAGCTaGGCTCGGGCCGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LPAGHSTAAVLPPTSESEEGKYS*ARAVAS
Trigger: GGAGGCCACGGCCCGAGCCCAGCTGTATTTACCCTC...CTCTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGCTGTGTCCTGCAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp AGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTCTCTTCCCGTCTCTCTaGGCCAGCGCCAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: RRVTVSCCLLLVSSAAWCLFPSL*ASARNE
Trigger: CTCATTCCTGGCGCTGGCTCAGAGAGACGGGAAGAG...ACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp AGTCCCCTGAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCGCATCTCTCAGCCCCTaGAAATCTGGGGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: SPLRTSVRSASCRFQPSTASLSP*KSGGLS
Trigger: ACTCAATCCCCCAGATTTTCAGGGGCTGAGAGATGC...GGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTCAGGGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp CAGCCGCCGCACCTCAGACTGCACCAATGCCAACTGGTGCTGGGTCTCCCAGGCCACAAATCAAAGGTATaGGGATGGGGATCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: QPPHLRLHQCQLVLGLPGHKSKV*GWGSPS
Trigger: GGACGGAGATCCCCATCCTCATACCTTTGATTTGTG...GCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp AGTCCCCTGAGAACCTCTGTCCGCTCAGCCTCATGCCGGTTCCAGCCCTCCACCTCATGGTATCTTTCTTaGGGTCGGCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SPLRTSVRSASCRFQPSTSWYLS*GRQPQP
Trigger: TGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGA...GGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGACAGAGGTTCTCAGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAATTGCCCAGCCCGAGCTaGATCCCGCTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASELPSPS*IPLFLQ
Trigger: CTGCAGGAAGAGCGGGATGCAGCTCGGGCTGGGCAA...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CTCACCCAAGCGGGAGTCTGTGTTCCTTCTGGGGACATTATCCCCTCGGCCATCCGCCGCACCTCAGACTaGACCAATGCCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LTQAGVCVPSGDIIPSAIRRTSD*TNANWC
Trigger: GCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCG...GATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CAGCCGCCGCACCTCAGACTGCACCAATGCCAACTGGTGCTGGGTCTCCCAGGCAAGCTCATTTCCAGCTaGAGGGCATCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QPPHLRLHQCQLVLGLPGKLISS*RASLSL
Trigger: GAGAGAGAGAGATGCCCTGCAGCTGGAAATGAGCTT...GCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCATCTGGGGGATTGAGTaGAGGCCCTGGCCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPIWGIE*RPWPKA
Trigger: AGCCTTCGGCCAGGGCCTCCACTCAATCCCCCAGAT...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCCCGTTGCTGCAGTCTaGCACTTTCCTGCTCACGAT +
Preference number: 4 (lower is better)
Translates to: GQPEESPTLDAHSVAQPEPVAAV*HFPAHD
Trigger: ATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGG...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp CTTCCTGCAGGACACAGCACCGCTGCTGTTCTGCCTCCAACCTCAGAGTCAGAGAGCTGGTGCTCTTGCTaGGCCCAGGTCTGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LPAGHSTAAVLPPTSESESWCSC*AQVCRS
Trigger: AGAACGGCAGACCTGGGCCCAGCAAGAGCACCAGCT...CTCTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGCTGTGTCCTGCAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp CTTCCTGCAGGACACAGCACCGCTGCTGTTCTGCCTCCAACCTCAGAGTCAGAGTCCAGCTGGATCCGCTaGCTTTCATACCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPAGHSTAAVLPPTSESESSWIR*LSYRAC
Trigger: GCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGA...CTCTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGCTGTGTCCTGCAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp GCACAGCCAGCTCCGACTCCAGCTGGATCCGCTGGCTTTCATACCGGGCCTGCAAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AQPAPTPAGSAGFHTGPASLCSF*GHYPLG
Trigger: GCCGAGGGGATAATGTCCCCAGAAGGAACACAGACT...TGCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CAA 72 bp TGCAAAGAACAGGAGGCGCTCCAGGTAGCTCGTCCCTaGCTTCCCGGCTCTGCTGCAATACAGGCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: CKEQEALQVARP*LPGSAAIQASG
Trigger: CCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTGGAGCGCCTCCTGTTCTTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp CTCACCCAAGCGGGAGTCTGTGTTCCTTCTGGGGACATTATCCCCTCGGCCATCCGGGTCTGCAGGCTCTaGATATGGCGCTCACAATGC +
Preference number: 4 (lower is better)
Translates to: LTQAGVCVPSGDIIPSAIRVCRL*IWRSQC
Trigger: GCATTGTGAGCGCCATATTCAGAGCCTGCAGACCCG...GATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCCCTCTTGAAGTCCCCTaGGAACCTCTGTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPPLEVP*EPLSAQ
Trigger: CTGAGCGGACAGAGGTTCTCAGGGGACTTCAAGAGG...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp AGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTGAAGGAGCTGGTCAGTaGGAGCCCTTTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: RRVTVSCCLLLVSSAAWCEGAGQ*EPFSPL
Trigger: CAGGGGAGAAAAGGGCTCTCACTGACCAGCTCCTTC...ACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp CCTCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACTGCTGGGGAAAAGGGTaGGGAGTCTGGGTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: PPPVSLFPVAAVWHFPAHCWGKG*GVWVLP
Trigger: GGGCAACACCCAGACTCCTCACCCTTTTCCCCAGCA...GTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR GCA 90 bp CTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTCTTGAAGTCCCCTCGATGCTCACTCAGTTaGCCAGCCCGAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: LLLASGELCCLVFLLKSPRCSLS*PARAAS
Trigger: GGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCG...AGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCTGCTGGGCCCAGGTCTaGCGTTCTTCTTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPCWAQV*RSSSRA
Trigger: TGCCCTAGAAGAAGAACGGCAGACCTGGGCCCAGCA...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCTTAAGCTGGTGCTCTTaGTGGGCCCAGGTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPLSWCS*WAQVCR
Trigger: ACGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAA...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGGACACCTCCATCAGCTaGCTTGGGAATGTAAGCCCA +
Preference number: 4 (lower is better)
Translates to: GQPEESPTLDAHSVAQPEDTSIS*LGNVSP
Trigger: TGGGCTTACATTCCCAAGGCAGCTGATGGAGGTGTC...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp AGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTCATGAGGCGGGGAGGTaGAGGGTAAATACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RRVTVSCCLLLVSSAAWCHEAGR*RVNTAG
Trigger: CCCAGCTGTATTTACCCTCCACCTCCCCGCCTCATG...ACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR CCA 90 bp AGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTAGCTCCTCCAGGGCTTaGGCTGAGCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: RRVTVSCCLLLVSSAAWCSSSRA*AELDGD
Trigger: GTCTCCATCTAGCTCAGCCCAAGCCCTGGAGGAGCT...ACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp CCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATAGGCGGTGGAATACGTaGCACTTGAGGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PEESPTLDAHSVAQPELHRRWNT*HLRGFL
Trigger: GAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCT...ATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp CCTTGCTTCCCGGCTCTGCTGCAATACAGGCTTCAGGGCCACGGCCATGGGAGGGACCTGGGCATCAACTaGGAGGAGACATTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: PCFPALLQYRLQGHGHGRDLGIN*EETLVE
Trigger: TTCCACTAATGTCTCCTCCCAGTTGATGCCCAGGTC...CCTCCCATGGCCGTGGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp TGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGCAGACGACACTTGGTTaGGCCCAGGGGGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: CSLALSCSRFRASMASERQTTLG*AQGVLM
Trigger: CATCAGAACCCCCTGGGCTCAACCAAGTGTCGTCTG...CCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp CTTCCTGCAGGACACAGCACCGCTGCTGTTCTGCCTCCAACCTCAGAGTCAGAGGCGGCGGGTATGCTCTaGATCCAATGCATCTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPAGHSTAAVLPPTSESEAAGML*IQCISQ
Trigger: CTGAGAGATGCATTGGATTCAGAGCATACCCGCCGC...CTCTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGCTGTGTCCTGCAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp CTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTCTTGAAGTCCCCTCCTCTTGAAGTCCCCTaGGAACCTCTGTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LLLASGELCCLVFLLKSPPLEVP*EPLSAQ
Trigger: CTGAGCGGACAGAGGTTCTCAGGGGACTTCAAGAGG...AGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp TTTGGTTTTGTGGACAGGCGGTGGAATACGTGGCACTTGAGGGGCTTCCTCCCAGGCCTTTCTGCCCTATaGTCGGGATGGAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FGFVDRRWNTWHLRGFLPGLSAL*SGWKAP
Trigger: TGGGGCCTTCCATCCCGATCATAGGGCAGAAAGGCC...TGGGAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAAACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp GCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCGGAATACGTGGCACTTaGGGGGCTTCCTCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: AGYCLLLLASGELCCLVFGIRGT*GASSQD
Trigger: ATCTTGGGAGGAAGCCCCTCAAGTGCCACGTATTCC...GAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGGCCACGGCTAATTGTTaGTGTAGCTCTAACACTCGG +
Preference number: 4 (lower is better)
Translates to: GQPEESPTLDAHSVAQPEATANC*CSSNTR
Trigger: CCGAGTGTTAGAGCTACAGCAACAATTAGCCGTGGC...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CAGCGCCTGGTAGTGTTCCTTAAGCTGGTGCTCTTGCTGGGCCCAGGTCTGCCGGCCACGGCTAATTGTTaGTGTAGCTCTAACACTCGG +
Preference number: 4 (lower is better)
Translates to: QRLVVFLKLVLLLGPGLPATANC*CSSNTR
Trigger: CCGAGTGTTAGAGCTACAGCAACAATTAGCCGTGGC...CGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACACTACCAGGCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CCTCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGCACCGCTGCTGTTCTaGCTCCAACCTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PPPVSLFPVAAVWHFPAHAPLLF*LQPQSQ
Trigger: CTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGC...GTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGCATCCCGCTCTTCCTaGAGGACACAGCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: LRKALFQAGYCLLLLASGASRSS*RTQHRC
Trigger: GCAGCGGTGCTGTGTCCTGCAGGAAGAGCGGGATGC...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp TGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGATGGAAGGCCCCAAGTaGAGAGAAGGCCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: CSLALSCSRFRASMASERMEGPK*REGPSC
Trigger: ACAGCTGGGGCCTTCTCTGCACTTGGGGCCTTCCAT...CCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CCGAGCCTGGTAGAGTCGCAACAGTTGAGACACCTCCATCAGCTGCCTTGGGAATCTCTGGGGAACCACTaGTGGGACCACTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: PSLVESQQLRHLHQLPWESLGNH*WDHCLV
Trigger: CACAAGGCAGTGGTCCCAGCAGTGGTTCCCCAGAGA...TTCCCAAGGCAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTACCAGGCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGCTCCTCCAGGGCTTaGGCTGAGCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASESSSRA*AELDGD
Trigger: GTCTCCATCTAGCTCAGCCCAAGCCCTGGAGGAGCT...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGGCCCTGGCCGAAGGCTaGTGTAGCGGGGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVALAEG*CSGETA
Trigger: AGCTGTTTCCCCGCTACACCAGCCTTCGGCCAGGGC...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp TGGCCTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCATCTGGGGGATTGAGTaGAGGCCCTGGCCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: WPQKGFVPGGLLSPAACFIWGIE*RPWPKA
Trigger: AGCCTTCGGCCAGGGCCTCCACTCAATCCCCCAGAT...GAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCGGCTTCCTCCCAAGATaGGACAGTCAGAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPGFLPR*DSQRTR
Trigger: TCTGGTCCTCTGACTGTCCCATCTTGGGAGGAAGCC...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp GCACAGCCAGCTCCGACTCCAGCTGGATCCGCTGGCTTTCATACCGGGCCTGCAGGCTGGGAAAGCTTTTaGAATCCACTTGTCCAACTG +
Preference number: 4 (lower is better)
Translates to: AQPAPTPAGSAGFHTGPAGWESF*NPLVQL
Trigger: CAGTTGGACAAGTGGATTCCAAAAGCTTTCCCAGCC...TGCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CAA 72 bp CTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTCTaGAAGTCCCCTGAGAACCTCTGTCCGCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LASGELCCLVFL*KSPENLCPLSL
Trigger: GAGGCTGAGCGGACAGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp CTTGTCCAGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACCCTCCGCCTGCCGGCTaGGGCGCAAAGAAGCATAGA +
Preference number: 4 (lower is better)
Translates to: LVQLFNHGIFLAVGSHSHPPPAG*GAKKHR
Trigger: TCTATGCTTCTTTGCGCCTCAGCCGGCAGGCGGAGG...GTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGTCCTTCTCGGGCTCCTaGGGCCCGGGGCTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKSFSGS*GPGLEG
Trigger: ACCCTCCAGCCCCGGGCCTCAGGAGCCCGAGAAGGA...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTCACCCAAGCGGGAGTCTGTGTTCCTTCTGGGGACATTATCCCCTCGGCCATCAAAGAATGCTGGCTCTaGAAAGAGGGGCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LTQAGVCVPSGDIIPSAIKECWL*KEGPNR
Trigger: CCTGTTGGGCCCCTCTTTTCAGAGCCAGCATTCTTT...GATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAATTCCCCACCCCACTaGGGAAATGCACGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASENSPPH*GNARGE
Trigger: CTCTCCACGTGCATTTCCTCAGTGGGGTGGGGAATT...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCTCATGGTATCTTTCTTaGGGTCGGCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: AGYCLLLLASGELCCLVFSWYLS*GRQPQP
Trigger: TGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGA...GAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTCTTGAAGTCCCCTCGGGTTACTGTCTCCTaGTGCTTGCTTCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLLASGELCCLVFLLKSPRVTVS*CLLLVS
Trigger: GCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCG...AGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CCGAGCCTGGTAGAGTCGCAACAGTTGAGACACCTCCATCAGCTGCCTTGGGAAAGTCTGGCACTTTCCTaGTCACGATTCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSLVESQQLRHLHQLPWESLALS*SRFRAS
Trigger: GGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACT...TTCCCAAGGCAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTACCAGGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CTTCCTGCAGGACACAGCACCGCTGCTGTTCTGCCTCCAACCTCAGAGTCAGAGTCTCTTTCCCGTTGCTaGAGTCTGGCACTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LPAGHSTAAVLPPTSESESLSRC*SLALSC
Trigger: GCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGA...CTCTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGCTGTGTCCTGCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAGTCTCCAACTCTCGATaGTCACTCAGTTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASEVSNSR*SLSCPA
Trigger: GGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGAC...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGCTTTGTTCCTGCTGGGCCCAGGTCTaGCGTTCTTCTTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: ALSCSRFRASMASERLCSCWAQV*RSSSRA
Trigger: TGCCCTAGAAGAAGAACGGCAGACCTGGGCCCAGCA...GGAACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CCGAGCCTGGTAGAGTCGCAACAGTTGAGACACCTCCATCAGCTGCCTTGGGAATGTTCCTTAAGCTGGTaGTCTTGCTGGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSLVESQQLRHLHQLPWECSLSW*SCWAQV
Trigger: GACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACA...TTCCCAAGGCAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTACCAGGCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGCTTTGTTCCTTCTCCCCTGGTCCCTaGCTGACTTTCCCTCACCTC +
Preference number: 4 (lower is better)
Translates to: ALSCSRFRASMASERLCSFSPGP*LTFPHL
Trigger: GAGGTGAGGGAAAGTCAGGCAGGGACCAGGGGAGAA...GGAACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp AGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGATTGAGTGGAGGCCCTaGCCGAAGGCTGGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: SVSLSRCCSLALSCSRFRIEWRP*PKAGVA
Trigger: CGCTACACCAGCCTTCGGCCAGGGCCTCCACTCAAT...CCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGTGCACCAATGCCAACTaGTGCTGGGTCTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVCTNAN*CWVSQA
Trigger: CGCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCA...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp CTCACCCAAGCGGGAGTCTGTGTTCCTTCTGGGGACATTATCCCCTCGGCCATCTTTGTGGACAGGCGGTaGAATACGTGGCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LTQAGVCVPSGDIIPSAIFVDRR*NTWHLR
Trigger: CCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAA...GATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp CCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATGGACCCGGAAAAGACTaGATGCCATGGCTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PEESPTLDAHSVAQPELHGPGKD*MPWLRE
Trigger: TTCCCTTAGCCATGGCATCCAGTCTTTTCCGGGTCC...ATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp CTCACCCAAGCGGGAGTCTGTGTTCCTTCTGGGGACATTATCCCCTCGGCCATCCTGAGGAAATGCACGTaGAGAGGGCCAGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: LTQAGVCVPSGDIIPSAILRKCT*RGPDES
Trigger: AGACTCATCTGGCCCTCTCCACGTGCATTTCCTCAG...GATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp TGGCCTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCCCTCTAGTGGGGGAGTaGGCTGGAGCCAAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: WPQKGFVPGGLLSPAACFPLVGE*AGAKKL
Trigger: AAGCTTCTTGGCTCCAGCCCACTCCCCCACTAGAGG...GAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571540.5
3UTR CAA 72 bp GAGGAGCCTGAGCTCGTAGTCCTCAGCCACCTGCTGTaGCCGTTCCTCTCGTTCTGCCATTTCCACCTTGAA +
Preference number: 4 (lower is better)
Translates to: EEPELVVLSHLL*PFLSFCHFHLE
Trigger: TTCAAGGTGGAAATGGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTGAGGACTACGAGCTCAGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTCTCCAGGGCTTGGGCTaGGCTAGATGGAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: LRKALFQAGYCLLLLASGLQGLG*ARWRQV
Trigger: GACTTGTCTCCATCTAGCTCAGCCCAAGCCCTGGAG...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp TATGATCGGGATGGAAGGCCCCAAGTGCAGAGAAGGCCCCAGCTGTGGATGAAGGCATCTCTCAGCCCCTaGAAATCTGGGGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: YDRDGRPQVQRRPQLWMKASLSP*KSGGLS
Trigger: ACTCAATCCCCCAGATTTTCAGGGGCTGAGAGATGC...CTTCATCCACAGCTGGGGCCTTCTCTGCACTTGGGGCCTTCCATCCCGATCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGTCCTGTGATGTTCCCTaGGGGAGGCTGCTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVSCDVP*GRLLAV
Trigger: TACGGCAAGCAGCCTCCCTCAGGGAACATCACAGGA...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp TATGATCGGGATGGAAGGCCCCAAGTGCAGAGAAGGCCCCAGCTGTGGATGAAGCTGCCATTTCCACCTTaGACTGAGCTAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: YDRDGRPQVQRRPQLWMKLPFPP*TELADW
Trigger: CCAGTCAGCTAGCTCAGTTCAAGGTGGAAATGGCAG...CTTCATCCACAGCTGGGGCCTTCTCTGCACTTGGGGCCTTCCATCCCGATCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp GAGGAAGAAATCAGCGTCAGATCCTCTCAATTCCCCACCCCACTGAGGAAATGCGGCCCCAGCTGTGGATaGAGTGAGGTCTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EEEISVRSSQFPTPLRKCGPSCG*SEVWFG
Trigger: CCCAAACCAGACCTCACTTCATCCACAGCTGGGGCC...GCATTTCCTCAGTGGGGTGGGGAATTGAGAGGATCTGACGCTGATTTCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCTTGAGGCCCTCCAGCTaGGCAGGCGGCAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVLRPSS*AGGSPC
Trigger: GCAAGGGCTGCCGCCTGCTCAGCTGGAGGGCCTCAA...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp GAGGAAGAAATCAGCGTCAGATCCTCTCAATTCCCCACCCCACTGAGGAAATGCCCCCTGGTCCCTGCCTaGCTTTCCCTCACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: EEEISVRSSQFPTPLRKCPLVPA*LSLTSF
Trigger: GAAAGAGGTGAGGGAAAGTCAGGCAGGGACCAGGGG...GCATTTCCTCAGTGGGGTGGGGAATTGAGAGGATCTGACGCTGATTTCTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGCCGTGGCCTCCGCCTaGCGGCTGAGGCGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRAVASA*RLRRKE
Trigger: TTCTTTGCGCCTCAGCCGGCAGGCGGAGGCCACGGC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTGTTACTGTCTCCTGCTaGTTGCTTCTGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRVTVSCCLLLVSSAAWCVTVSC*LLLVSS
Trigger: AGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAAC...ACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGACGGGTTACTGTCTCCTaGTGCTTGCTTCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SSSVSLSRCCSLALSCSRRVTVS*CLLLVS
Trigger: GCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCG...TCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAGTCTCTCTTTCCCGTTaGTGCAGTCTGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASEVSLSR*CSLALS
Trigger: GGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGAC...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGCTTTGTTCCGTCTCCAACTCTCGATaGTCACTCAGTTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: ALSCSRFRASMASERLCSVSNSR*SLSCPA
Trigger: GGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGAC...GGAACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp TGGCCTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCCTCAGACTGCACCAATaGCAACTGGTGCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: WPQKGFVPGGLLSPAACFLRLHQ*QLVLGL
Trigger: GAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAG...GAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTTCAGCCACCTGCTGTTaGCGTTCCTCTCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LRKALFQAGYCLLLLASGSATCC*RSSRSA
Trigger: GGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTGA...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGCAGGCGGCAGCCCTTaGTTTAGGAGGCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRAGGSP*FRRPSP
Trigger: CGGGGAGGGCCTCCTAAAGCAAGGGCTGCCGCCTGC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAACTTCAGACGACACTTaGTTGAGCCCAGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASETSDDT*LSPGGS
Trigger: AGAACCCCCTGGGCTCAACCAAGTGTCGTCTGAAGT...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR CCA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGAGTGAGGTTTGGAGCATaGTCTGGAGCTGACCCCGAA +
Preference number: 4 (lower is better)
Translates to: SSSVSLSRCCSLALSCSRVRFGA*SGADPE
Trigger: TTCGGGGTCAGCTCCAGACCATGCTCCAAACCTCAC...TCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR CCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCGATTCAGGGCCTCCATaGCCTCAGAAAGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPDSGPP*PQKGFV
Trigger: AACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATC...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp TCTTGTCCAGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCAAATGCCAACTGGTGCTaGGTCTCCCAGGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SCPVVQSWYLSCGRQPQPNANWC*VSQAAW
Trigger: CCAGGCCGCCTGGGAGACCCAGCACCAGTTGGCATT...TGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTCCAGCAGGAGGAGCTaGAGGGTTGGGCGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSSSRRS*RVGRRE
Trigger: CTCCCGCCGCCCAACCCTCCAGCTCCTCCTGCTGGA...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGGTTAGAGAAGATCTGTaGATCCACCTCTCATCCTTC +
Preference number: 4 (lower is better)
Translates to: GQPEESPTLDAHSVAQPEVREDL*IHLSSF
Trigger: GAAGGATGAGAGGTGGATCCACAGATCTTCTCTAAC...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCATGGTCTGGAGCTaGCCCCGAACACTTTCCATC +
Preference number: 4 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVSMVWS*PRTLSI
Trigger: GATGGAAAGTGTTCGGGGTCAGCTCCAGACCATGCT...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp TGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGATAGGCTGTATCACGTaGGGTTTGGAGCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSLALSCSRFRASMASERIGCIT*GLEHGL
Trigger: CAGACCATGCTCCAAACCTCACGTGATACAGCCTAT...CCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp TATGATCGGGATGGAAGGCCCCAAGTGCAGAGAAGGCCCCAGCTGTGGATGAAGCAGGAGGCTAAGATCTaGGGAGGAACTGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: YDRDGRPQVQRRPQLWMKQEAKI*GGTAKN
Trigger: GTTCTTTGCAGTTCCTCCTCAGATCTTAGCCTCCTG...CTTCATCCACAGCTGGGGCCTTCTCTGCACTTGGGGCCTTCCATCCCGATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAATGCTTGCGGCGGGTATaGTCTGAATCCAATGCATCT +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASECLRRV*SESNAS
Trigger: AGATGCATTGGATTCAGAGCATACCCGCCGCAAGCA...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGATCTGGTGAGCTCTGCTaGCTGGTGTTCCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSSVSLSRCCSLALSCSRSGELC*LVFLLK
Trigger: CTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGA...TCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CCTCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGTTACTGTCTCCTGCTaGTTGCTTCTGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PPPVSLFPVAAVWHFPAHVTVSC*LLLVSS
Trigger: AGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAAC...GTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp GGAGGCTCAGGGACCCGGAAAAGACTGGATGCCATGGCTAAGGGAACTTTGGTTTCTCTTTCCCGTTGCTaGAGTCTGGCACTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GGSGTRKRLDAMAKGTLVSLSRC*SLALSC
Trigger: GCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGA...AACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTTTCCGGGTCCCTGAGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CTTGTCCAGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACGCACCGCTGCTGTTCTaGCTCCAACCTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LVQLFNHGIFLAVGSHSHAPLLF*LQPQSQ
Trigger: CTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGC...GTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp AGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACGGCTAATCGATGCTCACTCAGTTaGCCAGCCCGAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: SCSIMVSFLRSAATATANRCSLS*PARAAS
Trigger: GGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCG...ATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTTGTTCCTTAAGCTGGTaGTCTTGCTGGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LRKALFQAGYCLLLLASGCSLSW*SCWAQV
Trigger: GACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACA...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAACCGTTCCTCTCGTTCTaGCATTTCCACCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASEPFLSF*HFHLEL
Trigger: CAGTTCAAGGTGGAAATGGCAGAACGAGAGGAACGG...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CCGAGCCTGGTAGAGTCGCAACAGTTGAGACACCTCCATCAGCTGCCTTGGGAAAGGGAATGGCCTTTCTaGCCTATGATCGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: PSLVESQQLRHLHQLPWEREWPF*PMIGME
Trigger: TTCCATCCCGATCATAGGGCAGAAAGGCCATTCCCT...TTCCCAAGGCAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTACCAGGCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCGCCCCGACGACCACCTaGTTCCGCCTACTCTCCACC +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVAPTTT*FRLLST
Trigger: GGTGGAGAGTAGGCGGAACCAGGTGGTCGTCGGGGC...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAACTTCGACTCAATTCTTaGGCGAAGCCGTCTAACCCT +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASELRLNS*AKPSNP
Trigger: AGGGTTAGACGGCTTCGCCCAAGAATTGAGTCGAAG...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR CCA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTCCCGTTGCTGCAGTCTaGCACTTTCCTGCTCACGAT +
Preference number: 4 (lower is better)
Translates to: LRKALFQAGYCLLLLASGPVAAV*HFPAHD
Trigger: ATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGG...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp CTCACCCAAGCGGGAGTCTGTGTTCCTTCTGGGGACATTATCCCCTCGGCCATCGGAACTTTGGTTTTGTaGACAGGCGGTGGAATACGT +
Preference number: 4 (lower is better)
Translates to: LTQAGVCVPSGDIIPSAIGTLVL*TGGGIR
Trigger: ACGTATTCCACCGCCTGTCCACAAAACCAAAGTTCC...GATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp CTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTCTTGAAGTCCCCTTGGCTAAGGGAACTTTaGTTTTGTGGACAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: LLLASGELCCLVFLLKSPWLREL*FCGQAV
Trigger: CACCGCCTGTCCACAAAACCAAAGTTCCCTTAGCCA...AGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp CGTAGTCCTCAGCCACCTGCTGTTGCCGTTCCTCTCGTTCTGCCATTTCCACCTCCGGTTACCCAATACTaGATGGAAGAACTACTCCCC +
Preference number: 4 (lower is better)
Translates to: RSPQPPAVAVPLVLPFPPPVTQY*MEELLP
Trigger: GGGGAGTAGTTCTTCCATCCAGTATTGGGTAACCGG...AGGTGGAAATGGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTGAGGACTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCGCATCCCGCTCTTCCTaGAGGACACAGCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSASRSS*RTQHRC
Trigger: GCAGCGGTGCTGTGTCCTGCAGGAAGAGCGGGATGC...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGTTGCCCAGCCCGAGCTaGATCCCGCTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKLPSPS*IPLFLQ
Trigger: CTGCAGGAAGAGCGGGATGCAGCTCGGGCTGGGCAA...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCACCAATGCCAACTGGTaGTGGGTCTCCCAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSTNANW*WVSQAA
Trigger: GGCCGCCTGGGAGACCCAGCACCAGTTGGCATTGGT...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGCTTTCATACCGGGCCTaGACCAAGCTCATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SVSLSRCCSLALSCSRFRLSYRA*TKLISS
Trigger: GCTGGAAATGAGCTTGGTGCAGGCCCGGTATGAAAG...CCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTGCTTGCCGTAGGCTaGTCTCCTGAGCCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRLLAVG*SPEPAP
Trigger: TGGCGCAGGCTCAGGAGAGCAGCCTACGGCAAGCAG...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp GAGGAAGAAATCAGCGTCAGATCCTCTCAATTCCCCACCCCACTGAGGAAATGCCTTGCTTCCCGGCTCTaGTGCAATACAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EEEISVRSSQFPTPLRKCLASRL*CNTGFR
Trigger: CCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAG...GCATTTCCTCAGTGGGGTGGGGAATTGAGAGGATCTGACGCTGATTTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR GCA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGAGTCTTGCGGCGGGTATaGTCTGAATCCAATGCATCT +
Preference number: 4 (lower is better)
Translates to: SSSVSLSRCCSLALSCSRVLRRV*SESNAS
Trigger: AGATGCATTGGATTCAGAGCATACCCGCCGCAAGAC...TCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR CCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGCCCTGGCCGAAGGCTaGTGTAGCGGGGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRALAEG*CSGETA
Trigger: AGCTGTTTCCCCGCTACACCAGCCTTCGGCCAGGGC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTCCAGTTGTTCAATCATaGTATCTTTCTTGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: RRVTVSCCLLLVSSAAWCPVVQS*YLSCGR
Trigger: CCGACCGCAAGAAAGATACCATGATTGAACAACTGG...ACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTAATGCCAACTGGTGCTaGGTCTCCCAGGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRNANWC*VSQAAW
Trigger: CCAGGCCGCCTGGGAGACCCAGCACCAGTTGGCATT...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTTGTCCAGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACAGCTCCGACTCCAGCTaGATCCGCTGGCTTTCATAC +
Preference number: 4 (lower is better)
Translates to: LVQLFNHGIFLAVGSHSHSSDSS*IRWLSY
Trigger: GTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCT...GTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGGGGTTCTCATTGTTCTaGGGCACTGTCTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVGFSLF*GTVSSN
Trigger: GTTGCTGGAGACAGTGCCCCAGAACAATGAGAACCC...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAGGTGTTGCCCATCTTTaGTATGACCACAGCACCAAA +
Preference number: 4 (lower is better)
Translates to: CCSLALSCSRFRASMASEGVAHL*YDHSTK
Trigger: TTTGGTGCTGTGGTCATACCAAAGATGGGCAACACC...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
3UTR CAA 72 bp ACCCGGAAAAGACTGGATGCCATGGCTAAGGGAACTTaGGTTTTGTGGACAGGCGGTGGAATACGTGGCACT +
Preference number: 4 (lower is better)
Translates to: TRKRLDAMAKGT*VLWTGGGIRGT
Trigger: AGTGCCACGTATTCCACCGCCTGTCCACAAAACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTTTCCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp CCTCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACCTTTTCCAATCCGACTaGCAAGCTTCGACTCAATTC +
Preference number: 4 (lower is better)
Translates to: PPPVSLFPVAAVWHFPAHLFQSD*QASTQF
Trigger: GAATTGAGTCGAAGCTTGTCAGTCGGATTGGAAAAG...GTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGAGCCAGCGCCAGGAATaGGAGGATCCCGATAGGCTG +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKSQRQE*EDPDRL
Trigger: CAGCCTATCGGGATCCTCTCATTCCTGGCGCTGGCT...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp AGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACGGCTAATGCGGCGGGTATGCTCTaGATCCAATGCATCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SCSIMVSFLRSAATATANAAGML*IQCISQ
Trigger: CTGAGAGATGCATTGGATTCAGAGCATACCCGCCGC...ATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp AGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACGGCTAATGCCTGGTGTTCCTCTTaGAGTCCCCTGAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: SCSIMVSFLRSAATATANAWCSS*SPLRTS
Trigger: AGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGC...ATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGGCCTTTCTGCCCTATaGTCGGGATGGAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRGLSAL*SGWKAP
Trigger: TGGGGCCTTCCATCCCGATCATAGGGCAGAAAGGCC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGCAGCGCAGAGCGGGTaGGGACAGAAGACCTACTGT +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRAAQSG*GQKTYC
Trigger: ACAGTAGGTCTTCTGTCCGCACCCGCTCTGCGCTGC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTACAGCGTTAAGAGGGTaGAGCGCAGAGCGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFTALRG*SAERVR
Trigger: CCGCACCCGCTCTGCGCTGCACCCTCTTAACGCTGT...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTTGTCCAGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACGTCTCTCTTTCCCGTTaGTGCAGTCTGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: LVQLFNHGIFLAVGSHSHVSLSR*CSLALS
Trigger: GGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGAC...GTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR GCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCGATGCTCACTCAGTTaGCCAGCCCGAGCTGCATCC +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVRCSLS*PARAAS
Trigger: GGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCGCCGCACCTCAGACTaGACCAATGCCAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRRRTSD*TNANWC
Trigger: GCACCAGTTGGCATTGGTGCAGTCTGAGGTGCGGCG...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCGCTTCCCGGCTCTGCTaGAATACAGGCTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSASRLC*NTGFRA
Trigger: GGCCCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGC...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCTACTCGGGGCAGGGTaGCCACTTTTCTTCCGTGCG +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVLLGAG*PLFFRA
Trigger: CGCACGGAAGAAAAGTGGGCACCCTGCCCCGAGTAG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTATCTGGGGGATTGAGTaGAGGCCCTGGCCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRIWGIE*RPWPKA
Trigger: AGCCTTCGGCCAGGGCCTCCACTCAATCCCCCAGAT...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGGATTCAGGGCCTCCATaGCCTCAGAAAGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVDSGPP*PQKGFV
Trigger: AACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATC...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCAGCTGGTGCTCTTGCTaGGCCCAGGTCTGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSSWCSC*AQVCRS
Trigger: AGAACGGCAGACCTGGGCCCAGCAAGAGCACCAGCT...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGTGCACCAATGCCAACTaGTGCTGGGTCTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKCTNAN*CWVSQA
Trigger: CGCCTGGGAGACCCAGCACCAGTTGGCATTGGTGCA...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCAAAGACTGGATGCCATaGCTAAGGGAACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPKDWMP*LRELWF
Trigger: AAACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTT...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR TCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCTCCAGGGCTTGGGCTaGGCTAGATGGAGACAAGTC +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVLQGLG*ARWRQV
Trigger: GACTTGTCTCCATCTAGCTCAGCCCAAGCCCTGGAG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCGGGTCTGCAGGCTCTaGATATGGCGCTCACAATGC +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVRVCRL*IWRSQC
Trigger: GCATTGTGAGCGCCATATTCAGAGCCTGCAGACCCG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGCCTCTTGAAGTCCCCTaGGAACCTCTGTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKPLEVP*EPLSAQ
Trigger: CTGAGCGGACAGAGGTTCTCAGGGGACTTCAAGAGG...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCGCTGCTTGCTTCTGGTaGGCTCTGCTGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSAACFW*ALLPGV
Trigger: AACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGC...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTGGCCCCAGCTGTGGATaGAGTGAGGTCTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFGPSCG*SEVWFG
Trigger: CCCAAACCAGACCTCACTTCATCCACAGCTGGGGCC...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGGCACCGCTGCTGTTCTaGCTCCAACCTCAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKAPLLF*LQPQSQ
Trigger: CTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGC...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTTCAGCCACCTGCTGTTaGCGTTCCTCTCGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRSATCC*RSSRSA
Trigger: GGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTGA...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCTGCTGGTTCCCACTCTaGAGTTCGCACACTCGCGCT +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVCWFPL*SSHTRA
Trigger: AGCGCGAGTGTGCGAACTGCAGAGTGGGAACCAGCA...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGATGGAAGGCCCCAAGTaGAGAGAAGGCCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKMEGPK*REGPSC
Trigger: ACAGCTGGGGCCTTCTCTGCACTTGGGGCCTTCCAT...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCACTGCTGGGACCACTaGCTTGTGAATGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVHCWDH*LVNGRR
Trigger: CCTCCTCCCATTCACAAGGCAGTGGTCCCAGCAGTG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTCTCTGGGGAACCACTaGTGGGACCACTGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSSLGNH*WDHCLV
Trigger: CACAAGGCAGTGGTCCCAGCAGTGGTTCCCCAGAGA...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGTACGCTCAAAACCGTTaGCAGCCTCCCGCCCACTGT +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKYAQNR*QPPAHC
Trigger: ACAGTGGGCGGGAGGCTGCCAACGGTTTTGAGCGTA...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTACTGAGCTAGCTGACTaGCCAGCTCCTGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRTELAD*PAPAGA
Trigger: AGCACCAGCAGGAGCTGGCCAGTCAGCTAGCTCAGT...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCAGTGGGCCTGCAGCATaGCCTGCAGTCTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSSGPAA*PAVFPP
Trigger: TGGTGGAAAGACTGCAGGCCATGCTGCAGGCCCACT...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCTTACCCAATACTGGATaGAAGAACTACTCCCCAATT +
Preference number: 4 (lower is better)
Translates to: EESPTLDAHSVAQPELHPLPNTG*KNYSPI
Trigger: AATTGGGGAGTAGTTCTTCCATCCAGTATTGGGTAA...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
3UTR CAA 72 bp AGGGTCTTGTCCAGTTGTTCAATCATGGTATCTTTCTaGCGGTCGGCAGCCACAGCCACGGCTAATTGTTGC +
Preference number: 4 (lower is better)
Translates to: RVLSSCSIMVSF*RSAATATANCC
Trigger: GCAACAATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR TCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCAGCATGGTCTGGAGCTaGCCCCGAACACTTTCCATC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSSMVWS*PRTLSI
Trigger: GATGGAAAGTGTTCGGGGTCAGCTCCAGACCATGCT...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCGCGGCGGGTATGCTCTaGATCCAATGCATCTCTCAG +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSAAGML*IQCISQ
Trigger: CTGAGAGATGCATTGGATTCAGAGCATACCCGCCGC...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTCCTGTGATGTTCCCTaGGGGAGGCTGCTTGCCGTA +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFSCDVP*GRLLAV
Trigger: TACGGCAAGCAGCCTCCCTCAGGGAACATCACAGGA...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCGGAATACGTGGCACTTaGGGGGCTTCCTCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVGIRGT*GASSQD
Trigger: ATCTTGGGAGGAAGCCCCTCAAGTGCCACGTATTCC...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCCGGGTTACTGTCTCCTaGTGCTTGCTTCTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSRVTVS*CLLLVS
Trigger: GCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCG...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTAGTCTGGCACTTTCCTaGTCACGATTCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRSLALS*SRFRAS
Trigger: GGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACT...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGGTCTCCAACTCTCGATaGTCACTCAGTTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKVSNSR*SLSCPA
Trigger: GGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGAC...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGTGTTCCTTAAGCTGGTaGTCTTGCTGGGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKCSLSW*SCWAQV
Trigger: GACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACA...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCCTCAGACTGCACCAATaGCAACTGGTGCTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSLRLHQ*QLVLGL
Trigger: GAGACCCAGCACCAGTTGGCATTGGTGCAGTCTGAG...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGTCGCACACTCGCGCTTaGTCCCGGGCCAGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNESHTRA*SRASLS
Trigger: GCTCAGACTGGCCCGGGAGCAAGCGCGAGTGTGCGA...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGCCCGACTACGAGTGCTaGAAGCTGCAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKPDYEC*KLQINS
Trigger: GGAGTTGATCTGCAGCTTCCAGCACTCGTAGTCGGG...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTCAGGGGCCATGGGAGTaGGCAAAAGCATCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFQGPWE*AKASLS
Trigger: GGAAAGGGATGCTTTTGCCCACTCCCATGGCCCCTG...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCGTGAGGTTTGGAGCATaGTCTGGAGCTGACCCCGAA +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSVRFGA*SGADPE
Trigger: TTCGGGGTCAGCTCCAGACCATGCTCCAAACCTCAC...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCAGCTCCGACTCCAGCTaGATCCGCTGGCTTTCATAC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSSSDSS*IRWLSY
Trigger: GTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCT...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTACCTGAGGCCCGGGGCTaGAGGGTCCAGCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLPEARG*RVQQEE
Trigger: CTCCTCCTGCTGGACCCTCCAGCCCCGGGCCTCAGG...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGGGCTTCCTCCCAAGATaGGACAGTCAGAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKGFLPR*DSQRTR
Trigger: TCTGGTCCTCTGACTGTCCCATCTTGGGAGGAAGCC...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGACTGGGGCTGTCAGCTaGTGTTGCCATGAATACAGG +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKTGAVS*CCHEYR
Trigger: CCTGTATTCATGGCAACATCAGCTGACAGCCCCAGT...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCCGTCTAACCCTTCATaGGGCGGGGAGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEPSNPS*GGEVEG
Trigger: ACCCTCCACCTCCCCGCCTCATGAAGGGTTAGACGG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGCATCTCTCAGCCCCTaGAAATCTGGGGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRASLSP*KSGGLS
Trigger: ACTCAATCCCCCAGATTTTCAGGGGCTGAGAGATGC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGCTGCCATTTCCACCTTaGACTGAGCTAGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKLPFPP*TELADW
Trigger: CCAGTCAGCTAGCTCAGTTCAAGGTGGAAATGGCAG...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp AGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACGGCTAATTGCCCATCTTTGGTATaGCCACAGCACCAAACTTTC +
Preference number: 4 (lower is better)
Translates to: SCSIMVSFLRSAATATANCPSLV*PQHQTF
Trigger: GAAAGTTTGGTGCTGTGGTCATACCAAAGATGGGCA...ATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGCTTCCCGACTACGAGTaGTGGAAGCTGCAGATCAAC +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKLPDYE*WKLQIN
Trigger: GTTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAG...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCGTCTCTCTTTCCCGTTaGTGCAGTCTGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSVSLSR*CSLALS
Trigger: GGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGAC...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTCTTGCTTCCCGGCTCTaGTGCAATACAGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFLASRL*CNTGFR
Trigger: CCTGAAGCCTGTATTGCAGCAGAGCCGGGAAGCAAG...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGGAGGGTAAATACAGCTaGGCTCGGGCCGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEEGKYS*ARAVAS
Trigger: GGAGGCCACGGCCCGAGCCCAGCTGTATTTACCCTC...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTTGTCCAGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACCCAGTTGTTCAATCATaGTATCTTTCTTGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: LVQLFNHGIFLAVGSHSHPVVQS*YLSCGR
Trigger: CCGACCGCAAGAAAGATACCATGATTGAACAACTGG...GTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCTTTGTGGACAGGCGGTaGAATACGTGGCACTTGAGG +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVFVDRR*NTWHLR
Trigger: CCTCAAGTGCCACGTATTCCACCGCCTGTCCACAAA...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCGGCGAGGGACAGCCTaGGAGGGAATCTCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNERRGTA*EGISFR
Trigger: CCGGAAAGAGATTCCCTCCCAGGCTGTCCCTCGCCG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGCCAAAAGAAACCTTGTaGACCCTCAGTCACGCCCTA +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKPKETL*TLSHAL
Trigger: TAGGGCGTGACTGAGGGTTCACAAGGTTTCTTTTGG...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCTATCCCCGGTCAACTaGGCTCTTAAGTTCTCACAC +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVLSPVN*ALKFSH
Trigger: GTGTGAGAACTTAAGAGCTCAGTTGACCGGGGATAG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGATAGGCTGTATCACGTaGGGTTTGGAGCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKIGCIT*GLEHGL
Trigger: CAGACCATGCTCCAAACCTCACGTGATACAGCCTAT...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCTCTTCCCGTCTCTCTaGGCCAGCGCCAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNELFPSL*ASARNE
Trigger: CTCATTCCTGGCGCTGGCTCAGAGAGACGGGAAGAG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGCAGGAGGCTAAGATCTaGGGAGGAACTGCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKQEAKI*GGTAKN
Trigger: GTTCTTTGCAGTTCCTCCTCAGATCTTAGCCTCCTG...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTAAAGAATGCTGGCTCTaGAAAGAGGGGCCCAACAGG +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFKECWL*KEGPNR
Trigger: CCTGTTGGGCCCCTCTTTTCAGAGCCAGCATTCTTT...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGTGCTTGCGGCGGGTATaGTCTGAATCCAATGCATCT +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKCLRRV*SESNAS
Trigger: AGATGCATTGGATTCAGAGCATACCCGCCGCAAGCA...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTAGTCCGCTCAGCCTCATaGCGGTTCCAGCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLVRSAS*RFQPST
Trigger: GGTGGAGGGCTGGAACCGGCATGAGGCTGAGCGGAC...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGGTTACTGTCTCCTGCTaGTTGCTTCTGGTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKVTVSC*LLLVSS
Trigger: AGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAAC...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCAAGCTCATTTCCAGCTaGAGGGCATCTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVKLISS*RASLSL
Trigger: GAGAGAGAGAGATGCCCTGCAGCTGGAAATGAGCTT...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGGCCTGCAGCATGGCCTaGAGTCTTTCCACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEACSMA*SLSTSS
Trigger: GGAGCTGGTGGAAAGACTGCAGGCCATGCTGCAGGC...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGAGGGAATGGCCTTTCTaGCCTATGATCGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKREWPF*PMIGME
Trigger: TTCCATCCCGATCATAGGGCAGAAAGGCCATTCCCT...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTGACACCTCCATCAGCTaGCTTGGGAATGTAAGCCCA +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFDTSIS*LGNVSP
Trigger: TGGGCTTACATTCCCAAGGCAGCTGATGGAGGTGTC...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACGGCTAATCTCGGCCATCAGTCCTaGTACACAAATCAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: SCSIMVSFLRSAATATANLGHQS*YTNQRY
Trigger: ATACCTTTGATTTGTGTAGCAGGACTGATGGCCGAG...ATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTCACGGAGAAAGACTTaGGAGAAGGGAGGAAGACTC +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSSRRKT*EKGGRL
Trigger: GAGTCTTCCTCCCTTCTCCCAAGTCTTTCTCCGTGA...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCCTTCGACTCAATTCTTaGGCGAAGCCGTCTAACCCT +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSLRLNS*AKPSNP
Trigger: AGGGTTAGACGGCTTCGCCCAAGAATTGAGTCGAAG...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGATTGAGTGGAGGCCCTaGCCGAAGGCTGGTGTAGCG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEIEWRP*PKAGVA
Trigger: CGCTACACCAGCCTTCGGCCAGGGCCTCCACTCAAT...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGATTCAGGGCCTCCATaGCCTCAGAAAGGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRDSGPP*PQKGFV
Trigger: AACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGTCCAGCTGGATCCGCTaGCTTTCATACCGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNESSWIR*LSYRAC
Trigger: GCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGA...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGGTGGTGCTGAGCAGCTaGTTGGCCTCATCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEVVLSS*LASSQW
Trigger: CCACTGGGATGAGGCCAACCAGCTGCTCAGCACCAC...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTGGACCCGGAAAAGACTaGATGCCATGGCTAAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFGPGKD*MPWLRE
Trigger: TTCCCTTAGCCATGGCATCCAGTCTTTTCCGGGTCC...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGGGACAACAGCGCTGCTaGAGCTCCTCTTCCCGACTA +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEGQQRC*SSSSRL
Trigger: TAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCC...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCAGACGACACTTGGTTaGGCCCAGGGGGTTCTGATG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEQTTLG*AQGVLM
Trigger: CATCAGAACCCCCTGGGCTCAACCAAGTGTCGTCTG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTACCTCCGCCTGCCGGCTaGGGCGCAAAGAAGCATAGA +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLPPPAG*GAKKHR
Trigger: TCTATGCTTCTTTGCGCCTCAGCCGGCAGGCGGAGG...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTTTTAGCTTTGTCCACTaGATCTTAGCCGCCCCAACT +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRFSFVH*ILAAPT
Trigger: AGTTGGGGCGGCTAAGATTCAGTGGACAAAGCTAAA...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGATCCATCTCAAAGATATaGTTAGAACCATCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SSSVSLSRCCSLALSCSRSISKI*LEPSFF
Trigger: GAAAAAGGATGGTTCTAAGCATATCTTTGAGATGGA...TCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR GCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTGCCACGGCTAATTGTTaGTGTAGCTCTAACACTCGG +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFATANC*CSSNTR
Trigger: CCGAGTGTTAGAGCTACAGCAACAATTAGCCGTGGC...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGTGCTGGGCCCAGGTCTaGCGTTCTTCTTCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNECWAQV*RSSSRA
Trigger: TGCCCTAGAAGAAGAACGGCAGACCTGGGCCCAGCA...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGTTAAGCTGGTGCTCTTaGTGGGCCCAGGTCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNELSWCS*WAQVCR
Trigger: ACGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAA...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTAGCCAGCTCCTGCTGGTaGTGTCCACTCAGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLASSCW*CPLRSC
Trigger: GCAGGACCTGAGTGGACAGCACCAGCAGGAGCTGGC...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCCCTTCGACCCCTCCTaGCAAGAAAGCCATAGCGAG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEPFDPS*QESHSE
Trigger: CTCGCTATGGCTTTCTTGCCAGGAGGGGTCGAAGGG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTACAGAAGACCTACTGTaGGACAACAGCGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFTEDLL*DNSAAE
Trigger: TTCAGCAGCGCTGTTGTCCCACAGTAGGTCTTCTGT...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCAGTTCCAGGGGCCATaGGAGTGGGCAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEQFQGP*EWAKAS
Trigger: GGATGCTTTTGCCCACTCCCATGGCCCCTGGAACTG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATGAGGCGGGGAGGTaGAGGGTAAATACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEHEAGR*RVNTAG
Trigger: CCCAGCTGTATTTACCCTCCACCTCCCCGCCTCATG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGAGCTCCTCCAGGGCTTaGGCTGAGCTAGATGGAGAC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNESSSRA*AELDGD
Trigger: GTCTCCATCTAGCTCAGCCCAAGCCCTGGAGGAGCT...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGAGGCGGTGGAATACGTaGCACTTGAGGGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNERRWNT*HLRGFL
Trigger: GAGGAAGCCCCTCAAGTGCCACGTATTCCACCGCCT...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGGGAACTTTGGTTTTGTaGACAGGCGGTGGAATACGT +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKGTLVL*TGGGIR
Trigger: ACGTATTCCACCGCCTGTCCACAAAACCAAAGTTCC...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTGCCAAGGATCCTTGGTaGATTAAGGATATCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFAKDPW*IKDIEA
Trigger: AGCCTCGATATCCTTAATTCACCAAGGATCCTTGGC...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCTTTTCCAATCCGACTaGCAAGCTTCGACTCAATTC +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVLFQSD*QASTQF
Trigger: GAATTGAGTCGAAGCTTGTCAGTCGGATTGGAAAAG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTCAATTTCTGTCCCCCTaGCCTACTAGTCCCTCAATT +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFQFLSP*PTSPSI
Trigger: AATTGAGGGACTAGTAGGGCAGGGGGACAGAAATTG...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGACGAGTGCTGGAAGCTaGAGATCAACTCCGGCACAG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNETSAGS*RSTPAQ
Trigger: CTGTGCCGGAGTTGATCTGCAGCTTCCAGCACTCGT...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCCAGTTGTTCAATCATaGTATCTTTCTTGCGGTCGG +
Preference number: 4 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVPVVQS*YLSCGR
Trigger: CCGACCGCAAGAAAGATACCATGATTGAACAACTGG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCCCGTTGCTGCAGTCTaGCACTTTCCTGCTCACGAT +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEPVAAV*HFPAHD
Trigger: ATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTATGCAGCTGCTTCCTGTaGTGTTCCCTGAGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLCSCFL*CSLREA
Trigger: AGCCTCCCTCAGGGAACATCACAGGAAGCAGCTGCA...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGTCTCTTTCCCGTTGCTaGAGTCTGGCACTTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNESLSRC*SLALSC
Trigger: GCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGA...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGATATCGAGGCTTTCTaGTTAGAGGAAAGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRDIEAF*LEERFP
Trigger: TGGAAACCTTTCCTCTAACCAGAAAGCCTCGATATC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGACTTCAGACGACACTTaGTTGAGCCCAGGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNETSDDT*LSPGGS
Trigger: AGAACCCCCTGGGCTCAACCAAGTGTCGTCTGAAGT...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGGGGTTCTCATTGTTCTaGGGCACTGTCTCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEGFSLF*GTVSSN
Trigger: GTTGCTGGAGACAGTGCCCCAGAACAATGAGAACCC...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGAAAGACTGGATGCCATaGCTAAGGGAACTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKKDWMP*LRELWF
Trigger: AAACCAAAGTTCCCTTAGCCATGGCATCCAGTCTTT...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNESLCSF*GHYPLG
Trigger: GCCGAGGGGATAATGTCCCCAGAAGGAACACAGACT...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTAGCCTGGTGTTCCTCTTaGAGTCCCCTGAGAACCTCT +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLAWCSS*SPLRTS
Trigger: AGAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGC...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTATGAGCCAGAGACTCTaGTACAGACTAATGAGCATT +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFMSQRL*YRLMSI
Trigger: AATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCAT...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTTCCAAATTCCTATaGGCCAGAGACTCTGATACA +
Preference number: 4 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSFSKFL*ARDSDT
Trigger: TGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAA...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGAGAGCTGGGAGGTTCTaGTTTAGCAAAGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNERAGRF*FSKVQE
Trigger: CTCCTGGACTTTGCTAAAGCAGAACCTCCCAGCTCT...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTATCATGGTATCTTTCTTaGGGTCGGCAGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLSWYLS*GRQPQP
Trigger: TGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGA...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTATCTGGTGAGCTCTGCTaGCTGGTGTTCCTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLSGELC*LVFLLK
Trigger: CTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGA...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTACTTTCATACCGGGCCTaGACCAAGCTCATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLLSYRA*TKLISS
Trigger: GCTGGAAATGAGCTTGGTGCAGGCCCGGTATGAAAG...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTACCGTTCCTCTCGTTCTaGCATTTCCACCTTGAACTG +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLPFLSF*HFHLEL
Trigger: CAGTTCAAGGTGGAAATGGCAGAACGAGAGGAACGG...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCCACCCAGAGTTCATTaGTCTGCAGGTTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEPPRVH*SAGFSF
Trigger: AAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTATGGCTAAGGGAACTTTaGTTTTGTGGACAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLWLREL*FCGQAV
Trigger: CACCGCCTGTCCACAAAACCAAAGTTCCCTTAGCCA...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR GCA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTCCATCTCAAAGATATaGTTAGAACCATCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFSISKI*LEPSFF
Trigger: GAAAAAGGATGGTTCTAAGCATATCTTTGAGATGGA...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR TCA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTAGGTTTCTTTACGAAGTaGTTCCCTACAAAACCTCTA +
Preference number: 4 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLGFFTK*FPTKPL
Trigger: TAGAGGTTTTGTAGGGAATCACTTCGTAAAGAAACC...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS CCA 90 bp GCCTGCAGTCTTTCCACCAGCTCCACCCGCTGCTCCTCCAGCTGCTaGTTCCCACTCTGCAGTTCGCACACTCGCGCTTGCTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: ACSLSTSSTRCSSSC*FPLCSSHTRACSRA
Trigger: GGCCCGGGAGCAAGCGCGAGTGTGCGAACTGCAGAGTGGGAACCAGCAGCTGGAGGAGCAGCGGGTGGAGCTGGTGGAAAGACTGCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000576723.5
ENST00000576922.5
CDS GCA 90 bp CTGAGCAGCTGGTTGGCCTCATCCCAGTGGGCCTGCAGCATGGCCTaGAGTCTTTCCACCAGCTCCACCCGCTGCTCCTCCAGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LSSWLASSQWACSMA*SLSTSSTRCSSSCW
Trigger: CCAGCAGCTGGAGGAGCAGCGGGTGGAGCTGGTGGAAAGACTGCAGGCCATGCTGCAGGCCCACTGGGATGAGGCCAACCAGCTGCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000576723.5
ENST00000576922.5
CDS GCA 90 bp TGGGCCTGCAGCATGGCCTGCAGTCTTTCCACCAGCTCCACCCGCTaGTCCTCCAGCTGCTGGTTCCCACTCTGCAGTTCGCACACTCGC +
Preference number: 5 (lower is better)
Translates to: WACSMACSLSTSSTR*SSSCWFPLCSSHTR
Trigger: GCGAGTGTGCGAACTGCAGAGTGGGAACCAGCAGCTGGAGGAGCAGCGGGTGGAGCTGGTGGAAAGACTGCAGGCCATGCTGCAGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000576723.5
ENST00000576922.5
CDS TCA 90 bp CCGAAGGCTGGTGTAGCGGGGAAACAGCTCCTCCAGGGCTTGGGCTaGGCTAGATGGAGACAAGTCTTGCAGGGGCCGGGTGTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: PKAGVAGKQLLQGLG*ARWRQVLQGPGVEQ
Trigger: TTGCTCAACACCCGGCCCCTGCAAGACTTGTCTCCATCTAGCTCAGCCCAAGCCCTGGAGGAGCTGTTTCCCCGCTACACCAGCCTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS CCA 90 bp AGGGACAGCCTGGGAGGGAATCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCCGCTGTGTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: RDSLGGNPSGSLCSF*GHYPLGHQSRCVPA
Trigger: GGCTGGAACACAGCGGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGATTCCCTCCCAGGCTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576536.1
CDS-3UTR CAA 90 bp AGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCGCTCTCGATGCTCACTCAGTaGCCCAGCCCGAGCTGCATC +
Preference number: 5 (lower is better)
Translates to: SLQLSMLTQLPSPSCIPLSMLTQ*PSPSCI
Trigger: GATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGA...GAGCGGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp AGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTCTTAAGCTGGTGCTCTaGCTGGGCCCAGGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: RRVTVSCCLLLVSSAAWCLKLVL*LGPGLP
Trigger: CGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAAG...ACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp CTCACCCAAGCGGGAGTCTGTGTTCCTTCTGGGGACATTATCCCCTCGGCCATCCTTAAGCTGGTGCTCTaGCTGGGCCCAGGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: LTQAGVCVPSGDIIPSAILKLVL*LGPGLP
Trigger: CGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAAG...GATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp AGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCGCTCTCCTTCCTCCCAGGCTaGTACCCGCTGTGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLQLSMLTQLPSPSCIPLSFLPG*YPLCSS
Trigger: GCTGGAACACAGCGGGTACAAGCCTGGGAGGAAGGA...GAGCGGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS GCA 90 bp CTGTGGGACAACAGCGCTGCTGAAGCTCCTCTTCCCGACTACGAGTaGTGGAAGCTGCAGATCAACTCCGGCACAGGCTATCCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: LWDNSAAEAPLPDYE*WKLQINSGTGYPRS
Trigger: TGACCGGGGATAGCCTGTGCCGGAGTTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570784.1
CDS CCA 90 bp TCTCTTTCCGGGGGATCTCACCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCCGCTGTGTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SLSGGSHPSGSLCSF*GHYPLGHQSRCVPA
Trigger: GGCTGGAACACAGCGGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAGATCCCCCGGAAAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp GGGCAGCCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGGGCCTCAGAAAGGCTTaGTTCCAGGCGGGTTACTGT +
Preference number: 5 (lower is better)
Translates to: GQPEESPTLDAHSVAQPEGLRKA*FQAGYC
Trigger: ACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCC...CTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGGCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp CAGCGCCTGGTAGTGTTCCTTAAGCTGGTGCTCTTGCTGGGCCCAGGTCTGCCGGGCCTCAGAAAGGCTTaGTTCCAGGCGGGTTACTGT +
Preference number: 5 (lower is better)
Translates to: QRLVVFLKLVLLLGPGLPGLRKA*FQAGYC
Trigger: ACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCC...CGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAAGGAACACTACCAGGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS TCA 90 bp GACAAGCTTCGACTCAATTCTTGGGCGAAGCCGTCTAACCCTTCATaGGGCGGGGAGGTGGAGGGTAAATACAGCTGGGCTCGGGCCGTG +
Preference number: 5 (lower is better)
Translates to: DKLRLNSWAKPSNPS*GGEVEGKYSWARAV
Trigger: CACGGCCCGAGCCCAGCTGTATTTACCCTCCACCTCCCCGCCTCATGAAGGGTTAGACGGCTTCGCCCAAGAATTGAGTCGAAGCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS GCA 90 bp ACAGCGCTGCTGAAGCTCCTCTTCCCGACTACGAGTGCTGGAAGCTaGAGATCAACTCCGGCACAGGCTATCCCCGGTCAACTGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TALLKLLFPTTSAGS*RSTPAQAIPGQLSS
Trigger: AGAGCTCAGTTGACCGGGGATAGCCTGTGCCGGAGTTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS GCA 90 bp CAAAAGCATCCCTTTCCCCAGCTCCTGGGAACAGCGTTAAGAGGGTaGAGCGCAGAGCGGGTGCGGACAGAAGACCTACTGTGGGACAAC +
Preference number: 5 (lower is better)
Translates to: QKHPFPQLLGTALRG*SAERVRTEDLLWDN
Trigger: GTTGTCCCACAGTAGGTCTTCTGTCCGCACCCGCTCTGCGCTGCACCCTCTTAACGCTGTTCCCAGGAGCTGGGGAAAGGGATGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380262.7
ENST00000563694.6
CDS GCA 90 bp TTGTGGGACAACAGCGCTGCTGAAGCTCCTCTTCCCGACTACGAGTaGTGGAAGCTGCAGATCAACTCCGGCACAGGCTATCCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: LWDNSAAEAPLPDYE*WKLQINSGTGYPRS
Trigger: TGACCGGGGATAGCCTGTGCCGGAGTTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570782.1
CDS CCA 90 bp TGGGACAACAGCGCTGCTGAAGCTCCTCTTCCCGACTACGAGTGCTaGAAGCTGCAGATCAACTCCGGCACAGGCTATCCCCGGTCAACT +
Preference number: 5 (lower is better)
Translates to: WDNSAAEAPLPDYEC*KLQINSGTGYPRST
Trigger: AGTTGACCGGGGATAGCCTGTGCCGGAGTTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS CCA 90 bp TCTCTTTCCGGGGGATCTCACCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCTGCCGCTGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SLSGGSHPSGSLCSF*GHYPLGHQSCRCVP
Trigger: TGGAACACAGCGGCAGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAGATCCCCCGGAAAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565740.5
CDS-3UTR CAA 90 bp TGGCCTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGCAGGGGCCGGGTGTaGAGCAAGGTGGCTGTGCTA +
Preference number: 5 (lower is better)
Translates to: WPQKGFVPGGLLSPAACFCRGRV*SKVAVL
Trigger: TAGCACAGCCACCTTGCTCAACACCCGGCCCCTGCA...GAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR CAA 90 bp GCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCTGGCGCTCACAATGCTaGCGGCGGGTATGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: AGYCLLLLASGELCCLVFWRSQC*RRVCSE
Trigger: TTCAGAGCATACCCGCCGCAAGCATTGTGAGCGCCA...GAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCGAAGTGAGGTCTGGTTaGGGCTCCAGGGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: EESPTLDAHSVAQPELHPEVRSG*GSRGWK
Trigger: TTTCCAGCCCCTGGAGCCCAAACCAGACCTCACTTC...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS TCA 90 bp AGAGCGGGTGCGGACAGAAGACCTACTGTGGGACAACAGCGCTGCTaGAGCTCCTCTTCCCGACTACGAGTGCTGGAAGCTGCAGATCAA +
Preference number: 5 (lower is better)
Translates to: RAGADRRPTVGQQRC*SSSSRLRVLEAADQ
Trigger: TTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCCCACAGTAGGTCTTCTGTCCGCACCCGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380262.7
ENST00000563694.6
CDS-3UTR CAA 90 bp CCTCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACCACTTCAGACGACACTaGGTTGAGCCCAGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: PPPVSLFPVAAVWHFPAHHFRRH*VEPRGF
Trigger: GAACCCCCTGGGCTCAACCAAGTGTCGTCTGAAGTG...GTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR CAA 90 bp GAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCCATCATGGTATCTTTCTaGCGGTCGGCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: EESPTLDAHSVAQPELHPIMVSF*RSAATA
Trigger: GGCTGTGGCTGCCGACCGCAAGAAAGATACCATGAT...GGGATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp GCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCTGCCTGGTGTTCCTCTaGAAGTCCCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: AGYCLLLLASGELCCLVFCLVFL*KSPENL
Trigger: GAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGCA...GAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp CTTCCTGCAGGACACAGCACCGCTGCTGTTCTGCCTCCAACCTCAGAGTCAGAGACTGTCTCCTGCTGCTaGCTTCTGGTGAGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LPAGHSTAAVLPPTSESETVSCC*LLVSSA
Trigger: AGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGT...CTCTGACTCTGAGGTTGGAGGCAGAACAGCAGCGGTGCTGTGTCCTGCAGGAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp CCCGAAGAGTCTCCAACTCTCGATGCTCACTCAGTTGCCCAGCCCGAGCTGCATCCTCAGAGTCAGAGCTaGCCTTTCCTCCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: PEESPTLDAHSVAQPELHPQSQS*PFLLQC
Trigger: ACACTGGAGGAGGAAAGGCAAGCTCTGACTCTGAGG...ATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGAGAGTTGGAGACTCTTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS TCA 90 bp GGTGGCTGTGCTATCACTGTCAAAGGAGTCCTCTTCCCGTCTCTCTaGGCCAGCGCCAGGAATGAGAGGATCCCGATAGGCTGTATCACG +
Preference number: 5 (lower is better)
Translates to: GGCAITVKGVLFPSL*ASARNERIPIGCIT
Trigger: CGTGATACAGCCTATCGGGATCCTCTCATTCCTGGCGCTGGCTCAGAGAGACGGGAAGAGGACTCCTTTGACAGTGATAGCACAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS TCA 90 bp TCCCACTCTGCAGTTCGCACACTCGCGCTTGCTCCCGGGCCAGTCTaGAGCAAAGAGAGAAGAAGTGACTCAGGGCCTTTAAGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SHSAVRTLALAPGPV*SKERRSDSGPLRKQ
Trigger: CTGCTTCCTTAAAGGCCCTGAGTCACTTCTTCTCTCTTTGCTTCAGACTGGCCCGGGAGCAAGCGCGAGTGTGCGAACTGCAGAGTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576922.5
CDS-3UTR CAA 90 bp GCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCACACGGGCCAGGGTCTaGTCCAGTTGTTCAATCATG +
Preference number: 5 (lower is better)
Translates to: AGYCLLLLASGELCCLVFTRARV*SSCSIM
Trigger: CATGATTGAACAACTGGACAAGACCCTGGCCCGTGT...GAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp TGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGTGCCTGGTGTTCCTCTaGAAGTCCCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: CSLALSCSRFRASMASERCLVFL*KSPENL
Trigger: GAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGCA...CCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp AGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGTCGATGCTCACTCAGTaGCCCAGCCCGAGCTGCATC +
Preference number: 5 (lower is better)
Translates to: SVSLSRCCSLALSCSRFRSMLTQ*PSPSCI
Trigger: GATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGA...CCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS TCA 90 bp GCAAAGAAGCATAGAGCTGGGAGGTCACTTCAGACGACACTTGGTTaGGCCCAGGGGGTTCTGATGAATCACTCAGGAGATCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: AKKHRAGRSLQTTLG*AQGVLMNHSGDPPP
Trigger: GGGCGGAGGATCTCCTGAGTGATTCATCAGAACCCCCTGGGCTCAACCAAGTGTCGTCTGAAGTGACCTCCCAGCTCTATGCTTCTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000570784.1
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS GCA 90 bp ACGGAAACGGACCCAAATCCACTAGGAGCCCAATTTCTGTCCCCCTaGCCTACTAGTCCCTCAATTGGTTCCAGTCTCAAGAGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: TETDPNPLGAQFLSP*PTSPSIGSSLKRGR
Trigger: CCGCCCTCTCTTGAGACTGGAACCAATTGAGGGACTAGTAGGGCAGGGGGACAGAAATTGGGCTCCTAGTGGATTTGGGTCCGTTTCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS CCA 90 bp AGGGACAGCCTGGGAGGGAATCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCTGCTACACAAATCAA +
Preference number: 5 (lower is better)
Translates to: RDSLGGNPSGSLCSF*GHYPLGHQSCYTNQ
Trigger: TTGATTTGTGTAGCAGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGATTCCCTCCCAGGCTGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576723.5
CDS-3UTR CAA 90 bp GCACAGCCAGCTCCGACTCCAGCTGGATCCGCTGGCTTTCATACCGGGCCTGCACAGGGTCTTGTCCAGTaGTTCAATCATGGTATCTTT +
Preference number: 5 (lower is better)
Translates to: AQPAPTPAGSAGFHTGPAQGLVQ*FNHGIF
Trigger: AAAGATACCATGATTGAACAACTGGACAAGACCCTG...TGCAGGCCCGGTATGAAAGCCAGCGGATCCAGCTGGAGTCGGAGCTGGCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp TGGCCTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCACTGTCTCCTGCTGCTaGCTTCTGGTGAGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: WPQKGFVPGGLLSPAACFTVSCC*LLVSSA
Trigger: AGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGT...GAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAATGTCTCTCTTTCCCGTaGCTGCAGTCTGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: CCSLALSCSRFRASMASECLSFP*LQSGTF
Trigger: GAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACA...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp TCTTGTCCAGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACAGGTAGCTCGTCCCTaGCTTCCCGGCTCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: SCPVVQSWYLSCGRQPQPQVARP*LPGSAA
Trigger: TGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTG...TGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGGGAGGTTTTTCAGTCTaGGGGGCTGTAGCAAGGCGG +
Preference number: 5 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVGGFSV*GAVARR
Trigger: CCGCCTTGCTACAGCCCCCAAGACTGAAAAACCTCC...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp GCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTGGAGCCAAGAAGCTaGGGTCCCAAGAACAGAATA +
Preference number: 5 (lower is better)
Translates to: AGYCLLLLASGELCCLVFLEPRS*GPKNRI
Trigger: TATTCTGTTCTTGGGACCCAAGCTTCTTGGCTCCAG...GAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGTAACCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS TCA 90 bp CTGGAAGCTGCAGATCAACTCCGGCACAGGCTATCCCCGGTCAACTaGGCTCTTAAGTTCTCACACCCAAAACGTCCCAACGGAAACGGA +
Preference number: 5 (lower is better)
Translates to: LEAADQLRHRLSPVN*ALKFSHPKRPNGNG
Trigger: TCCGTTTCCGTTGGGACGTTTTGGGTGTGAGAACTTAAGAGCTCAGTTGACCGGGGATAGCCTGTGCCGGAGTTGATCTGCAGCTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS-3UTR CAA 90 bp GCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAAGGCTTTGTTCCACACGGGCCAGGGTCTaGTCCAGTTGTTCAATCATG +
Preference number: 5 (lower is better)
Translates to: ALSCSRFRASMASERLCSTRARV*SSCSIM
Trigger: CATGATTGAACAACTGGACAAGACCCTGGCCCGTGT...GGAACAAAGCCTTTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTCCTCAGAGTCAGAGCTaGCCTTTCCTCCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: LRKALFQAGYCLLLLASGPQSQS*PFLLQC
Trigger: ACACTGGAGGAGGAAAGGCAAGCTCTGACTCTGAGG...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCTTCGCACACTCGCGCTaGCTCCCGGGCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVFAHSR*LPGQSE
Trigger: CTCAGACTGGCCCGGGAGCAAGCGCGAGTGTGCGAA...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCGTGCTGAGCAGCTGGTaGGCCTCATCCCAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVVLSSW*ASSQWA
Trigger: GGCCCACTGGGATGAGGCCAACCAGCTGCTCAGCAC...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp TGCTGCAGTCTGGCACTTTCCTGCTCACGATTCAGGGCCTCCATGGCCTCAGAAATGGCTAAGGGAACTTaGGTTTTGTGGACAGGCGGT +
Preference number: 5 (lower is better)
Translates to: CCSLALSCSRFRASMASEMAKGT*VLWTGG
Trigger: ACCGCCTGTCCACAAAACCAAAGTTCCCTTAGCCAT...TTCTGAGGCCATGGAGGCCCTGAATCGTGAGCAGGAAAGTGCCAGACTGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp TCCTCCAGTGTCTCTCTTTCCCGTTGCTGCAGTCTGGCACTTTCCTGCTCACGAGTAGAGTCGCAACAGTaGAGACACCTCCATCAGCTG +
Preference number: 5 (lower is better)
Translates to: SSSVSLSRCCSLALSCSRVESQQ*RHLHQL
Trigger: CAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTAC...TCGTGAGCAGGAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACACTGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp CTGCTGCTTGCTTCTGGTGAGCTCTGCTGCCTGGTGTTCCTCTTGAAGTCCCCTGGGCTGGGAAAGCTTTaGGAATCCACTTGTCCAACT +
Preference number: 5 (lower is better)
Translates to: LLLASGELCCLVFLLKSPGLGKL*ESTCPT
Trigger: AGTTGGACAAGTGGATTCCAAAAGCTTTCCCAGCCC...AGGGGACTTCAAGAGGAACACCAGGCAGCAGAGCTCACCAGAAGCAAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTACGCTCAAAACCGTaGGCAGCCTCCCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRLRSKP*AASRPL
Trigger: CAGTGGGCGGGAGGCTGCCAACGGTTTTGAGCGTAG...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp TCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTGTGTCTCTCTTTCCCGTaGCTGCAGTCTGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: SERLCSRRVTVSCCLLLVCLSFP*LQSGTF
Trigger: GAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACA...CACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp AGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACGGCTAATTCAGACGACACTTGGTaGAGCCCAGGGGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: SCSIMVSFLRSAATATANSDDTW*SPGGSD
Trigger: ATCAGAACCCCCTGGGCTCAACCAAGTGTCGTCTGA...ATTAGCCGTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS-3UTR CAA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTCAGGTAGCTCGTCCCTaGCTTCCCGGCTCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFQVARP*LPGSAA
Trigger: TGCAGCAGAGCCGGGAAGCAAGGGACGAGCTACCTG...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCACTTCAGACGACACTaGGTTGAGCCCAGGGGGTTC +
Preference number: 5 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVHFRRH*VEPRGF
Trigger: GAACCCCCTGGGCTCAACCAAGTGTCGTCTGAAGTG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCGAAGTGAGGTCTGGTTaGGGCTCCAGGGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSEVRSG*GSRGWK
Trigger: TTTCCAGCCCCTGGAGCCCAAACCAGACCTCACTTC...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTTCCAAAGTCAGACGACACTTGGTaGAGCCCAGGGGGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LNLSRPNFPNLVIDRLPKSDDTW*SPGGSD
Trigger: ATCAGAACCCCCTGGGCTCAACCAAGTGTCGTCTGA...CTTTGGAAGACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTGGCGCTCACAATGCTaGCGGCGGGTATGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFWRSQC*RRVCSE
Trigger: TTCAGAGCATACCCGCCGCAAGCATTGTGAGCGCCA...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTATCATGGTATCTTTCTaGCGGTCGGCAGCCACAGCC +
Preference number: 5 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRIMVSF*RSAATA
Trigger: GGCTGTGGCTGCCGACCGCAAGAAAGATACCATGAT...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp GAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTGCCTGGTGTTCCTCTaGAAGTCCCCTGAGAACCTC +
Preference number: 5 (lower is better)
Translates to: ESPIIPLPPRVHCSAGFSCLVFL*KSPENL
Trigger: GAGGTTCTCAGGGGACTTCAAGAGGAACACCAGGCA...GCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTGGCCTCAGAAAGGCTTaGTTCCAGGCGGGTTACTGT +
Preference number: 5 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRGLRKA*FQAGYC
Trigger: ACAGTAACCCGCCTGGAACAAAGCCTTTCTGAGGCC...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTTAGCTTTGTCCCTCAGAGTCAGAGCTaGCCTTTCCTCCTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: PIIPLPPRVHCSAGFSFVPQSQS*PFLLQC
Trigger: ACACTGGAGGAGGAAAGGCAAGCTCTGACTCTGAGG...GACAAAGCTAAAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CTTGTCCAGTTGTTCAATCATGGTATCTTTCTTGCGGTCGGCAGCCACAGCCACAAGGGAACTTTGGTTTaGTGGACAGGCGGTGGAATA +
Preference number: 5 (lower is better)
Translates to: LVQLFNHGIFLAVGSHSHKGTLV*WTGGGI
Trigger: TATTCCACCGCCTGTCCACAAAACCAAAGTTCCCTT...GTGGCTGTGGCTGCCGACCGCAAGAAAGATACCATGATTGAACAACTGGACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571632.5
CDS-3UTR CAA 90 bp CTCAGAAAGGCTTTGTTCCAGGCGGGTTACTGTCTCCTGCTGCTTGCTTCTGGTCAGGGTCTTGTCCAGTaGTTCAATCATGGTATCTTT +
Preference number: 5 (lower is better)
Translates to: LRKALFQAGYCLLLLASGQGLVQ*FNHGIF
Trigger: AAAGATACCATGATTGAACAACTGGACAAGACCCTG...ACCAGAAGCAAGCAGCAGGAGACAGTAACCCGCCTGGAACAAAGCCTTTCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000571632.5
CDS-3UTR CAA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTACACGGGCCAGGGTCTaGTCCAGTTGTTCAATCATG +
Preference number: 5 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFTRARV*SSCSIM
Trigger: CATGATTGAACAACTGGACAAGACCCTGGCCCGTGT...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGTCAGCTCCAGCTCCCTaGTACTTTCCCTTCGACCCC +
Preference number: 5 (lower is better)
Translates to: NLYFPNSYEPETLIQTNESAPAP*YFPFDP
Trigger: GGGGTCGAAGGGAAAGTACAAGGGAGCTGGAGCTGA...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CTTTGTCCACTGAATCTTAGCCGCCCCAACTTTCCAAATCTTGTCATAGACCGTCTACTAGTCCCTCAATaGGTTCCAGTCTCAAGAGAG +
Preference number: 5 (lower is better)
Translates to: LCPLNLSRPNFPNLVIDRLLVPQ*VPVSRE
Trigger: CTCTCTTGAGACTGGAACCAATTGAGGGACTAGTAG...ACGGTCTATGACAAGATTTGGAAAGTTGGGGCGGCTAAGATTCAGTGGACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTATGCAGGGGCCGGGTGTaGAGCAAGGTGGCTGTGCTA +
Preference number: 5 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLCRGRV*SKVAVL
Trigger: TAGCACAGCCACCTTGCTCAACACCCGGCCCCTGCA...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTACTTAAGCTGGTGCTCTaGCTGGGCCCAGGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLLKLVL*LGPGLP
Trigger: CGGCAGACCTGGGCCCAGCAAGAGCACCAGCTTAAG...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp CTAAGAATCACCCATAATTCCACTACCACCCAGAGTTCATTGCTCTGCAGGTTTATGGCTAAGGGAACTTaGGTTTTGTGGACAGGCGGT +
Preference number: 5 (lower is better)
Translates to: LRITHNSTTTQSSLLCRFMAKGT*VLWTGG
Trigger: ACCGCCTGTCCACAAAACCAAAGTTCCCTTAGCCAT...AAACCTGCAGAGCAATGAACTCTGGGTGGTAGTGGAATTATGGGTGATTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGGGAGGTTTTTCAGTCTaGGGGGCTGTAGCAAGGCGG +
Preference number: 5 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEGGFSV*GAVARR
Trigger: CCGCCTTGCTACAGCCCCCAAGACTGAAAAACCTCC...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGACTGTCTCCTGCTGCTaGCTTCTGGTGAGCTCTGCT +
Preference number: 5 (lower is better)
Translates to: NLYFPNSYEPETLIQTNETVSCC*LLVSSA
Trigger: AGCAGAGCTCACCAGAAGCAAGCAGCAGGAGACAGT...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTATCGATGCTCACTCAGTaGCCCAGCCCGAGCTGCATC +
Preference number: 5 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLSMLTQ*PSPSCI
Trigger: GATGCAGCTCGGGCTGGGCAACTGAGTGAGCATCGA...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS TCA 90 bp TCCCAAGAACAGAATAGGTCTGGAGAGGGAGAATCAGGAAAATTCTaGAGCAAGCACCTTGAGGCTCAAGATCTCCAACATGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: SQEQNRSGEGESGKF*SKHLEAQDLQHVSV
Trigger: TACAGAAACATGTTGGAGATCTTGAGCCTCAAGGTGCTTGCTTCAGAATTTTCCTGATTCTCCCTCTCCAGACCTATTCTGTTCTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576587.1
CDS-3UTR CAA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGGTAGAGTCGCAACAGTaGAGACACCTCCATCAGCTG +
Preference number: 5 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEVESQQ*RHLHQL
Trigger: CAGCTGATGGAGGTGTCTCAACTGTTGCGACTCTAC...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTATGTCTCTCTTTCCCGTaGCTGCAGTCTGGCACTTTC +
Preference number: 5 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLCLSFP*LQSGTF
Trigger: GAAAGTGCCAGACTGCAGCAACGGGAAAGAGAGACA...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS TCA 90 bp AAATGTGCAAAGTTACTCCTACCTTCAGAAGCTCATTGGACACAATaGATAAACACAGCAAGGATAAAGGGGAAAGCCTTTCATTCATGC +
Preference number: 5 (lower is better)
Translates to: KCAKLLLPSEAHWTQ*INTARIKGKAFHSC
Trigger: GCATGAATGAAAGGCTTTCCCCTTTATCCTTGCTGTGTTTATTCATTGTGTCCAATGAGCTTCTGAAGGTAGGAGTAACTTTGCACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576587.1
CDS-3UTR CAA 90 bp AACCTCTATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCAGGGTCTTGTCCAGTaGTTCAATCATGGTATCTTT +
Preference number: 5 (lower is better)
Translates to: NLYFPNSYEPETLIQTNEQGLVQ*FNHGIF
Trigger: AAAGATACCATGATTGAACAACTGGACAAGACCCTG...CTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATAGAGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS-3UTR CAA 90 bp TATTTTCCAAATTCCTATGAGCCAGAGACTCTGATACAGACTAATGAGCATTTAAAGGGAACTTTGGTTTaGTGGACAGGCGGTGGAATA +
Preference number: 5 (lower is better)
Translates to: YFPNSYEPETLIQTNEHLKGTLV*WTGGGI
Trigger: TATTCCACCGCCTGTCCACAAAACCAAAGTTCCCTT...TAAATGCTCATTAGTCTGTATCAGAGTCTCTGGCTCATAGGAATTTGGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS CCA 72 bp GGAGGGTTGGGCGGCGGGAGAGTGGTGCTGAGCAGCTaGTTGGCCTCATCCCAGTGGGCCTGCAGCATGGCC +
Preference number: 6 (lower is better)
Translates to: GGLGGGRVVLSS*LASSQWACSMA
Trigger: GGCCATGCTGCAGGCCCACTGGGATGAGGCCAACCAGCTGCTCAGCACCACTCTCCCGCCGCCCAACCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000576723.5
ENST00000576922.5
CDS GCA 72 bp TGGTTGGCCTCATCCCAGTGGGCCTGCAGCATGGCCTaGAGTCTTTCCACCAGCTCCACCCGCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: WLASSQWACSMA*SLSTSSTRCSS
Trigger: GGAGGAGCAGCGGGTGGAGCTGGTGGAAAGACTGCAGGCCATGCTGCAGGCCCACTGGGATGAGGCCAACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000576723.5
ENST00000576922.5
CDS CCA 72 bp GGGCGAAGCCGTCTAACCCTTCATGAGGCGGGGAGGTaGAGGGTAAATACAGCTGGGCTCGGGCCGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GRSRLTLHEAGR*RVNTAGLGPWP
Trigger: AGGCCACGGCCCGAGCCCAGCTGTATTTACCCTCCACCTCCCCGCCTCATGAAGGGTTAGACGGCTTCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000570784.1
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS CAA 72 bp CTGCTGGTTCCCACTCTGCAGTTCGCACACTCGCGCTaGCTCCCGGGCCAGTCTGAGCTCGTAGTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: LLVPTLQFAHSR*LPGQSELVVLS
Trigger: GCTGAGGACTACGAGCTCAGACTGGCCCGGGAGCAAGCGCGAGTGTGCGAACTGCAGAGTGGGAACCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000576723.5
CDS GCA 72 bp CCCTTTCCCCAGCTCCTGGGAACAGCGTTAAGAGGGTaGAGCGCAGAGCGGGTGCGGACAGAAGACCTACTG +
Preference number: 6 (lower is better)
Translates to: PFPQLLGTALRG*SAERVRTEDLL
Trigger: CAGTAGGTCTTCTGTCCGCACCCGCTCTGCGCTGCACCCTCTTAACGCTGTTCCCAGGAGCTGGGGAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380262.7
ENST00000563694.6
CDS CCA 72 bp TGCAGCGCAGAGCGGGTGCGGACAGAAGACCTACTGTaGGACAACAGCGCTGCTGAAGCTCCTCTTCCCGAC +
Preference number: 6 (lower is better)
Translates to: CSAERVRTEDLL*DNSAAEAPLPD
Trigger: GTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCCCACAGTAGGTCTTCTGTCCGCACCCGCTCTGCGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380262.7
ENST00000563694.6
CDS CCA 72 bp GGGGGATCTCACCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GGSHPSGSLCSF*GHYPLGHQSCR
Trigger: GCGGCAGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAGATCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565740.5
CDS CCA 72 bp GGGGGATCTCACCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCCACTCC +
Preference number: 6 (lower is better)
Translates to: GGSHPSGSLCSF*GHYPLGHQSHS
Trigger: GGAGTGGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAGATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380262.7
CDS CCA 72 bp GGGGGATCTCACCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCCGCTGT +
Preference number: 6 (lower is better)
Translates to: GGSHPSGSLCSF*GHYPLGHQSRC
Trigger: ACAGCGGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGGTGAGATCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563694.6
CDS CCA 72 bp AATCACTCAGGAGATCCTCCGCCCCGAGGGGTGAACTaGGGCTGTCAGTGTGGGACAACAGCGCTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: NHSGDPPPRGVN*GCQCGTTALLK
Trigger: CTTCAGCAGCGCTGTTGTCCCACACTGACAGCCCCAGTTCACCCCTCGGGGCGGAGGATCTCCTGAGTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575408.5
CDS CCA 72 bp AGCGCTGCTGAAGCTCCTCTTCCCGACTACGAGTGCTaGAAGCTGCAGATCAACTCCGGCACAGGCTATCCC +
Preference number: 6 (lower is better)
Translates to: SAAEAPLPDYEC*KLQINSGTGYP
Trigger: GGGATAGCCTGTGCCGGAGTTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS CCA 72 bp CTGGGAGGGAATCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCCGCTGT +
Preference number: 6 (lower is better)
Translates to: LGGNPSGSLCSF*GHYPLGHQSRC
Trigger: ACAGCGGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGATTCCCTCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576536.1
CDS CAA 90 bp CTCCTCCAGCTGCTGGTTCCCACTCTGCAGTTCGCACACTCGCGCTaGCTCCCGGGCCAGTCTGAAGCAAAGAGAGAAGAAGTGACTCAG +
Preference number: 6 (lower is better)
Translates to: LLQLLVPTLQFAHSR*LPGQSEAKREEVTQ
Trigger: CTGAGTCACTTCTTCTCTCTTTGCTTCAGACTGGCCCGGGAGCAAGCGCGAGTGTGCGAACTGCAGAGTGGGAACCAGCAGCTGGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576922.5
CDS TCA 72 bp GCGGACAGAAGACCTACTGTGGGACAACAGCGCTGCTaGAGCTCCTCTTCCCGACTACGAGTGCTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: ADRRPTVGQQRC*SSSSRLRVLEA
Trigger: AGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCCCACAGTAGGTCTTCTGTCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380262.7
ENST00000563694.6
CDS TCA 72 bp ACTCCACGCCAAGGATCTGTGGGACAACAGCGCTGCTaGAGCTCCTCTTCCCGACTACGAGTGCTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: TPRQGSVGQQRC*SSSSRLRVLEA
Trigger: AGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCCCACAGATCCTTGGCGTGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570784.1
CDS GCA 72 bp CTGAAGCTCCTCTTCCCGACTACGAGTGCTGGAAGCTaGAGATCAACTCCGGCACAGGCTATCCCCGGTCAA +
Preference number: 6 (lower is better)
Translates to: LKLLFPTTSAGS*RSTPAQAIPGQ
Trigger: TTGACCGGGGATAGCCTGTGCCGGAGTTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS CCA 72 bp CTGGGAGGGAATCCAAGCGGGAGTCTGTGTTCCTTCTaGGGACATTATCCCCTCGGCCATCAGTCCTGCTAC +
Preference number: 6 (lower is better)
Translates to: LGGNPSGSLCSF*GHYPLGHQSCY
Trigger: GTAGCAGGACTGATGGCCGAGGGGATAATGTCCCCAGAAGGAACACAGACTCCCGCTTGGATTCCCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576723.5
CDS CAA 72 bp CTTCACCCGTTCTACCCAGGGTCAGCTCCAGCTCCCTaGTACTTTCCCTTCGACCCCTCCTGGCAAGAAAGC +
Preference number: 6 (lower is better)
Translates to: LHPFYPGSAPAP*YFPFDPSWQES
Trigger: GCTTTCTTGCCAGGAGGGGTCGAAGGGAAAGTACAAGGGAGCTGGAGCTGACCCTGGGTAGAACGGGTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS CAA 72 bp CTGCTGGTTCCCACTCTGCAGTTCGCACACTCGCGCTaGCTCCCGGGCCAGTCTGAAGCAAAGAGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: LLVPTLQFAHSR*LPGQSEAKREE
Trigger: TTCTTCTCTCTTTGCTTCAGACTGGCCCGGGAGCAAGCGCGAGTGTGCGAACTGCAGAGTGGGAACCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576922.5
CDS TCA 72 bp GCCAGGAATGAGAGGATCCCGATAGGCTGTATCACGTaGGGTTTGGAGCATGGTCTGGAGCTGACCCCGAAC +
Preference number: 6 (lower is better)
Translates to: ARNERIPIGCIT*GLEHGLELTPN
Trigger: GTTCGGGGTCAGCTCCAGACCATGCTCCAAACCTCACGTGATACAGCCTATCGGGATCCTCTCATTCCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS TCA 72 bp GCTATCACTGTCAAAGGAGTCCTCTTCCCGTCTCTCTaGGCCAGCGCCAGGAATGAGAGGATCCCGATAGGC +
Preference number: 6 (lower is better)
Translates to: AITVKGVLFPSL*ASARNERIPIG
Trigger: GCCTATCGGGATCCTCTCATTCCTGGCGCTGGCTCAGAGAGACGGGAAGAGGACTCCTTTGACAGTGATAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS GCA 72 bp AACAGCGCTGCTGAAGCTCCTCTTCCCGACTACGAGTaGTGGAAGCTGCAGATCAACTCCGGCACAGGCTAT +
Preference number: 6 (lower is better)
Translates to: NSAAEAPLPDYE*WKLQINSGTGY
Trigger: ATAGCCTGTGCCGGAGTTGATCTGCAGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS CCA 72 bp ATCAATCAAGGGAGCAGCTCTTCACCGTTCCCAGTTTaGGCTCTACCCATGGGAAAGGGGCTGGGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: INQGSSSSPFPV*ALPMGKGLGPE
Trigger: TTCAGGCCCCAGCCCCTTTCCCATGGGTAGAGCCCAAACTGGGAACGGTGAAGAGCTGCTCCCTTGATTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576922.5
CDS CAA 72 bp CCCAATTTCTGTCCCCCTGCCCTACTAGTCCCTCAATaGGTTCCAGTCTCAAGAGAGGGCGGAACCTCACGC +
Preference number: 6 (lower is better)
Translates to: PNFCPPALLVPQ*VPVSREGGTSR
Trigger: GCGTGAGGTTCCGCCCTCTCTTGAGACTGGAACCAATTGAGGGACTAGTAGGGCAGGGGGACAGAAATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS CAA 72 bp GGCCAGTCTGAGCTCGTAGTCCTCAGCCACCTGCTGTaGCCGTTCCTCTCGTTCTGCCATTTCCACCTTGAA +
Preference number: 6 (lower is better)
Translates to: GQSELVVLSHLL*PFLSFCHFHLE
Trigger: TTCAAGGTGGAAATGGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTGAGGACTACGAGCTCAGACTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000576723.5
CDS CAA 72 bp CCAGGACCTGAGCTCGTAGTCCTCAGCCACCTGCTGTaGCCGTTCCTCTCGTTCTGCCATTTCCACCTTGAA +
Preference number: 6 (lower is better)
Translates to: PGPELVVLSHLL*PFLSFCHFHLE
Trigger: TTCAAGGTGGAAATGGCAGAACGAGAGGAACGGCAACAGCAGGTGGCTGAGGACTACGAGCTCAGGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576922.5
CDS CCA 72 bp GCTCCAGCTCCCTTGTACTTTCCCTTCGACCCCTCCTaGCAAGAAAGCCATAGCGAGCTTCCTTGTTCCCTA +
Preference number: 6 (lower is better)
Translates to: APAPLYFPFDPS*QESHSELPCSL
Trigger: TAGGGAACAAGGAAGCTCGCTATGGCTTTCTTGCCAGGAGGGGTCGAAGGGAAAGTACAAGGGAGCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS TCA 72 bp GCAGATCAACTCCGGCACAGGCTATCCCCGGTCAACTaGGCTCTTAAGTTCTCACACCCAAAACGTCCCAAC +
Preference number: 6 (lower is better)
Translates to: ADQLRHRLSPVN*ALKFSHPKRPN
Trigger: GTTGGGACGTTTTGGGTGTGAGAACTTAAGAGCTCAGTTGACCGGGGATAGCCTGTGCCGGAGTTGATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS TCA 72 bp AAGGATATCGAGGCTTTTGTGGGACAACAGCGCTGCTaGAGCTCCTCTTCCCGACTACGAGTGCTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: KDIEAFVGQQRC*SSSSRLRVLEA
Trigger: AGCTTCCAGCACTCGTAGTCGGGAAGAGGAGCTTCAGCAGCGCTGTTGTCCCACAAAAGCCTCGATATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570782.1
CDS TCA 72 bp CATAGAGCTGGGAGGTCACTTCAGACGACACTTGGTTaGGCCCAGGGGGTTCTGATGAATCACTCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: HRAGRSLQTTLG*AQGVLMNHSGD
Trigger: ATCTCCTGAGTGATTCATCAGAACCCCCTGGGCTCAACCAAGTGTCGTCTGAAGTGACCTCCCAGCTCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000570784.1
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS TCA 72 bp CCAACACTTTGGGAGGACCGTTTGAGGCTGGCAGTTTaGACCAGGCTTGGCAACATAGAGAGATGCCATCTC +
Preference number: 6 (lower is better)
Translates to: PTLWEDRLRLAV*TRLGNIERCHL
Trigger: GAGATGGCATCTCTCTATGTTGCCAAGCCTGGTTCAAACTGCCAGCCTCAAACGGTCCTCCCAAAGTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573862.1
CDS GCA 72 bp GACCCAAATCCACTAGGAGCCCAATTTCTGTCCCCCTaGCCTACTAGTCCCTCAATTGGTTCCAGTCTCAAG +
Preference number: 6 (lower is better)
Translates to: DPNPLGAQFLSP*PTSPSIGSSLK
Trigger: CTTGAGACTGGAACCAATTGAGGGACTAGTAGGGCAGGGGGACAGAAATTGGGCTCCTAGTGGATTTGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000570782.1
ENST00000570784.1
CDS CCA 72 bp GATCCCGATAGGCTGTATCACGTGAGGTTTGGAGCATaGTCTGGAGCTGACCCCGAACACTTTCCATCTCAA +
Preference number: 6 (lower is better)
Translates to: DPDRLYHVRFGA*SGADPEHFPSQ
Trigger: TTGAGATGGAAAGTGTTCGGGGTCAGCTCCAGACCATGCTCCAAACCTCACGTGATACAGCCTATCGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS CCA 72 bp GGGAAAAGGGTGAGGAGTCTGGGTGTTGCCCATCTTTaGTATGACCACAGCACCAAACTTTCCAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: GKRVRSLGVAHL*YDHSTKLSSSS
Trigger: AGAGGAGCTGGAAAGTTTGGTGCTGTGGTCATACCAAAGATGGGCAACACCCAGACTCCTCACCCTTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571540.5
ENST00000576587.1
CDS TCA 72 bp CCCAAGAACAGAATAGGTCTTGCGGCGGGTATGCTCTaGATCCAATGCATCTCTCAGCCCCTGAAAATCTGG +
Preference number: 6 (lower is better)
Translates to: PKNRIGLAAGML*IQCISQPLKIW
Trigger: CCAGATTTTCAGGGGCTGAGAGATGCATTGGATTCAGAGCATACCCGCCGCAAGACCTATTCTGTTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571540.5
CDS TCA 72 bp GCTGTATCACGTGAGGTTTGGAGCATGGTCTGGAGCTaGCCCCGAACACTTTCCATCTCAAAGATATGCTTA +
Preference number: 6 (lower is better)
Translates to: AVSREVWSMVWS*PRTLSISKICL
Trigger: TAAGCATATCTTTGAGATGGAAAGTGTTCGGGGTCAGCTCCAGACCATGCTCCAAACCTCACGTGATACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000380262.7
ENST00000563694.6
ENST00000565740.5
ENST00000571540.5
ENST00000575408.5
ENST00000576538.5
CDS GCA 72 bp TTTTGGCAGAGATGCAGCAGCCCACACAGCAAAATGTaGAAAGTTACTCCTACCTTCAGAAGCTCATTGGAC +
Preference number: 6 (lower is better)
Translates to: FWQRCSSPHSKM*KVTPTFRSSLD
Trigger: GTCCAATGAGCTTCTGAAGGTAGGAGTAACTTTGCACATTTTGCTGTGTGGGCTGCTGCATCTCTGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576587.1
CDS CAA 72 bp TTCCTGGATCTCCTGAGTAAAAATCCCATAAACCTTTaGGCAGAGATGCAGCAGCCCACACAGCAAAATGTG +
Preference number: 6 (lower is better)
Translates to: FLDLLSKNPINL*AEMQQPTQQNV
Trigger: CACATTTTGCTGTGTGGGCTGCTGCATCTCTGCCAAAAGGTTTATGGGATTTTTACTCAGGAGATCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576587.1
CDS CAA 90 bp ATAGGTCTGGAGAGGGAGAATCAGGAAAATTCTGAAGCAAGCACCTaGAGGCTCAAGATCTCCAACATGTTTCTGTACCTTTTCAGGAGA +
Preference number: 6 (lower is better)
Translates to: IGLERENQENSEAST*RLKISNMFLYLFRR
Trigger: TCTCCTGAAAAGGTACAGAAACATGTTGGAGATCTTGAGCCTCAAGGTGCTTGCTTCAGAATTTTCCTGATTCTCCCTCTCCAGACCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576587.1
CDS CAA 72 bp GAGAGGGAGAATCAGGAAAATTCTGAAGCAAGCACCTaGAGGCTCAAGATCTCCAACATGTTTCTGTACCTT +
Preference number: 6 (lower is better)
Translates to: ERENQENSEAST*RLKISNMFLYL
Trigger: AAGGTACAGAAACATGTTGGAGATCTTGAGCCTCAAGGTGCTTGCTTCAGAATTTTCCTGATTCTCCCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576587.1
CDS CAA 90 bp CCACACAGCAAAATGTGCAAAGTTACTCCTACCTTCAGAAGCTCATaGGACACAATGAATAAACACAGCAAGGATAAAGGGGAAAGCCTT +
Preference number: 6 (lower is better)
Translates to: PHSKMCKVTPTFRSS*DTMNKHSKDKGESL
Trigger: AAGGCTTTCCCCTTTATCCTTGCTGTGTTTATTCATTGTGTCCAATGAGCTTCTGAAGGTAGGAGTAACTTTGCACATTTTGCTGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576587.1