RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNOT6 (Homo sapiens)

Ensembl gene IDs: ENSG00000113300

Ensembl transcript IDs: ENST00000261951.9, ENST00000393356.7, ENST00000502447.1, ENST00000504343.1, ENST00000507016.1, ENST00000510148.1, ENST00000618123.4

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTCACATGATAGTAGTATTCTGGGTGACAAGCAGCACACTGCAATaGCACCGAGAAGCAGTGCTTGGATCTGGTGAGCAAAGATCCAGG +
Preference number: 1 (lower is better)
Translates to: IHMIVVFWVTSSTLQ*HREAVLGSGEQRSR
Trigger: CCTGGATCTTTGCTCACCAGATCCAAGCACTGCTTCTCGGTGTCATTGCAGTGTGCTGCTTGTCACCCAGAATACTACTATCATGTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CCA 90 bp CCGTATGGTTTATTCAGTTCCCATCACCCTCATCAAAGAGCTGTCTaGGCGGATGTGACATTCTTTGAGCTTATAGTGCAGATAATGTGC +
Preference number: 1 (lower is better)
Translates to: PYGLFSSHHPHQRAV*ADVTFFELIVQIMC
Trigger: GCACATTATCTGCACTATAAGCTCAAAGAATGTCACATCCGCCCAGACAGCTCTTTGATGAGGGTGATGGGAACTGAATAAACCATACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR GCA 90 bp TATGAAAAGATGACATCCTCCATTAACAAATACAACATGAGTAAGTaGTCCTCCTCTCCCGCTTCCATAAAGCTCTCTGGACCTGTGATT +
Preference number: 1 (lower is better)
Translates to: YEKMTSSINKYNMSK*SSSPASIKLSGPVI
Trigger: AATCACAGGTCCAGAGAGCTTTATGGAAGCGGGAGAGGAGGAGCACTTACTCATGTTGTATTTGTTAATGGAGGATGTCATCTTTTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CCA 90 bp AAGGTGGAGAAGCTGTTCAAACTGATCCACAGAATGCAGTATGCCTaGAAGAGGCAAAACAAGTATTTTCAAGACATAACAGGCCATTAC +
Preference number: 1 (lower is better)
Translates to: KVEKLFKLIHRMQYA*KRQNKYFQDITGHY
Trigger: GTAATGGCCTGTTATGTCTTGAAAATACTTGTTTTGCCTCTTCCAGGCATACTGCATTCTGTGGATCAGTTTGAACAGCTTCTCCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CCA 90 bp CATATTAAACACACACACACACACACACACACACACACACATTTCTaGAGATGTTCTCTGCCTATCTTTGGGACTATGAAAGTTGCACTC +
Preference number: 1 (lower is better)
Translates to: HIKHTHTHTHTHTHF*RCSLPIFGTMKVAL
Trigger: GAGTGCAACTTTCATAGTCCCAAAGATAGGCAGAGAACATCTCCAGAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAATATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 90 bp TCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAATTGTCATaGTGCACATTACCAACACAGTGTTCAGGAAAAATGAGTAAACAT +
Preference number: 1 (lower is better)
Translates to: SLVQPAPAHLHWKLS*CTLPTQCSGKMSKH
Trigger: ATGTTTACTCATTTTTCCTGAACACTGTGTTGGTAATGTGCATCATGACAATTTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CCA 90 bp ACTAATATGGTAAAGCTGTACTTCAGGAGATTGGCGACAAGGATTTaGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAAAACATGCCCT +
Preference number: 1 (lower is better)
Translates to: TNMVKLYFRRLATRI*VPSNFWSLKQKTCP
Trigger: AGGGCATGTTTTCTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCTGAAGTACAGCTTTACCATATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 90 bp GTGAACATCTTAAAATACTGTTTACGAATGGTGAAGAACACCTGCTaGAGGAGTTCTTGGAATTATCTGCAACATCTGTACTGGACATTC +
Preference number: 1 (lower is better)
Translates to: VNILKYCLRMVKNTC*RSSWNYLQHLYWTF
Trigger: GAATGTCCAGTACAGATGTTGCAGATAATTCCAAGAACTCCTTCAGCAGGTGTTCTTCACCATTCGTAAACAGTATTTTAAGATGTTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 90 bp ACAACCCTGTCCCAGAAGATTCAGAATTTTAAATACGTGGTCTGCTaGTCAACATTTATTTTTCCTCAAACCTCAGTACTACAGCTATAC +
Preference number: 1 (lower is better)
Translates to: TTLSQKIQNFKYVVC*STFIFPQTSVLQLY
Trigger: GTATAGCTGTAGTACTGAGGTTTGAGGAAAAATAAATGTTGATCAGCAGACCACGTATTTAAAATTCTGAATCTTCTGGGACAGGGTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 90 bp CACACACACATTTCTGGAGATGTTCTCTGCCTATCTTTGGGACTATaGAAGTTGCACTCAACAATTCATTTCTACAACTTTAGCTTAAAT +
Preference number: 1 (lower is better)
Translates to: HTHISGDVLCLSLGL*KLHSTIHFYNFSLN
Trigger: ATTTAAGCTAAAGTTGTAGAAATGAATTGTTGAGTGCAACTTTCATAGTCCCAAAGATAGGCAGAGAACATCTCCAGAAATGTGTGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAAGTGCTTGGATCTGGTaGGCAAAGATCCAGGGACTC +
Preference number: 2 (lower is better)
Translates to: SCFLSLISPTSSSSPSLESAWIW*AKIQGL
Trigger: GAGTCCCTGGATCTTTGCTCACCAGATCCAAGCACT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATGCACAGATTTTCTCTaGATGCACAGGCAGTGCTTG +
Preference number: 2 (lower is better)
Translates to: SCFLSLISPTSSSSPSLECTDFL*MHRQCL
Trigger: CAAGCACTGCCTGTGCATGCAGAGAAAATCTGTGCA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAAGCAAAAATCCTCAGTaGCCATACCTCACTCCCCTA +
Preference number: 2 (lower is better)
Translates to: SCFLSLISPTSSSSPSLESKNPQ*PYLTPL
Trigger: TAGGGGAGTGAGGTATGGCCACTGAGGATTTTTGCT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACAAATGAAAGACAGGTaGAAACACACCAATCCCTGT +
Preference number: 2 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEQMKDR*KHTNPC
Trigger: ACAGGGATTGGTGTGTTTGCACCTGTCTTTCATTTG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAATGATAGTAGTATTCTaGGTGACAAGCAGCACACTG +
Preference number: 2 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEMIVVF*VTSSTL
Trigger: CAGTGTGCTGCTTGTCACCCAGAATACTACTATCAT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTAAGTTGCCTCTGGTCTaGAAACATCCTAAGGTTGAA +
Preference number: 2 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAKLPLV*KHPKVE
Trigger: TTCAACCTTAGGATGTTTTCAGACCAGAGGCAACTT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTGCATGCACAGGCAGTaGTTGGTGAGAACAAATTTA +
Preference number: 2 (lower is better)
Translates to: QIVGKAASSVSLVQPAPACMHRQ*LVRTNL
Trigger: TAAATTTGTTCTCACCAAGCACTGCCTGTGCATGCA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTACAACATGAGTAAGTaGTCCTCCTCTCCCGCTTCC +
Preference number: 2 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQYNMSK*SSSPAS
Trigger: GGAAGCGGGAGAGGAGGAGCACTTACTCATGTTGTA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTGGAGGGAGTAAAGTATaGAAGAATGATCTCTGGATG +
Preference number: 2 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAGGSKV*KNDLWM
Trigger: CATCCAGAGATCATTCTTCCATACTTTACTCCCTCC...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACTAAGGAAAAGACACTaGCGACAAAAAGAATTCACA +
Preference number: 2 (lower is better)
Translates to: SCFLSLISPTSSSSPSLELRKRH*RQKEFT
Trigger: TGTGAATTCTTTTTGTCGTCAGTGTCTTTTCCTTAG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTCCCCTGCCTGCAGTTaGAACAAAAGCAGTTTGACC +
Preference number: 2 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSSPACS*NKSSLT
Trigger: GGTCAAACTGCTTTTGTTTCAACTGCAGGCAGGGGA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAGCTCTCTGGACCTGTaGTTACATAATGCAGATCGT +
Preference number: 2 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQSSLDL*LHNADR
Trigger: ACGATCTGCATTATGTAATCACAGGTCCAGAGAGCT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGACACCGAGAAGCAGTaGTTGGATCTGGTGAGCAAA +
Preference number: 2 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSDTEKQ*LDLVSK
Trigger: TTTGCTCACCAGATCCAAGCACTGCTTCTCGGTGTC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACCCCATAAAAAGTTATaGACTGGTTCTACATCAATA +
Preference number: 2 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEPHKKL*TGSTSI
Trigger: TATTGATGTAGAACCAGTGCATAACTTTTTATGGGG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCCACAGAATGCAGTATaGCTGGAAGAGGCAAAACAA +
Preference number: 2 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQPQNAV*LEEAKQ
Trigger: TTGTTTTGCCTCTTCCAGGCATACTGCATTCTGTGG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTGTACTGATTATAAACTaGATGTGTTTGGTGTCAGCA +
Preference number: 2 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAVLIIN*MCLVSA
Trigger: TGCTGACACCAAACACATCCAGTTTATAATCAGTAC...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCTACAGATTTCTGTGTaGAGAGAATACGCTGTTCAC +
Preference number: 2 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQLQISV*REYAVH
Trigger: GTGAACAGCGTATTCTCTTCACACAGAAATCTGTAG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAAGTTGCCTCTGGTCTaGAAACATCCTAAGGTTGAA +
Preference number: 2 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQKLPLV*KHPKVE
Trigger: TTCAACCTTAGGATGTTTTCAGACCAGAGGCAACTT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTAGCAGCACACTGCAATaGCACCGAGAAGCAGTGCTT +
Preference number: 2 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFSSTLQ*HREAVL
Trigger: AAGCACTGCTTCTCGGTGTCATTGCAGTGTGCTGCT...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTGGAAGAATGATCTCTaGATGTTGCTACTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFWKNDL*MLLLAS
Trigger: TGAGGCCAGTAGCAACATCCAGAGATCATTCTTCCA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGATGATAGTAGTATTCTaGGTGACAAGCAGCACACTG +
Preference number: 2 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQMIVVF*VTSSTL
Trigger: CAGTGTGCTGCTTGTCACCCAGAATACTACTATCAT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTGACACCGAGAAGCAGTaGTTGGATCTGGTGAGCAAA +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSDTEKQ*LDLVSK
Trigger: TTTGCTCACCAGATCCAAGCACTGCTTCTCGGTGTC...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTTACAACATGAGTAAGTaGTCCTCCTCTCCCGCTTCC +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSYNMSK*SSSPAS
Trigger: GGAAGCGGGAGAGGAGGAGCACTTACTCATGTTGTA...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTGGAAGAATGATCTCTaGATGTTGCTACTGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSWKNDL*MLLLAS
Trigger: TGAGGCCAGTAGCAACATCCAGAGATCATTCTTCCA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTTTCCTAATGCTCACATaGCGTCCTTTTGCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSFLMLT*RPFAPL
Trigger: CAGGGGAGCAAAAGGACGCCATGTGAGCATTAGGAA...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAGAATGCAGTATGCCTaGAAGAGGCAAAACAAGTAT +
Preference number: 2 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQRMQYA*KRQNKY
Trigger: ATACTTGTTTTGCCTCTTCCAGGCATACTGCATTCT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTCTACAGATTTCTGTGTaGAGAGAATACGCTGTTCAC +
Preference number: 2 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSLQISV*REYAVH
Trigger: GTGAACAGCGTATTCTCTTCACACAGAAATCTGTAG...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTACAACATGAGTAAGTaGTCCTCCTCTCCCGCTTCC +
Preference number: 2 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNYNMSK*SSSPAS
Trigger: GGAAGCGGGAGAGGAGGAGCACTTACTCATGTTGTA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTAGCAAAAATCCTCAGTaGCCATACCTCACTCCCCTA +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSSKNPQ*PYLTPL
Trigger: TAGGGGAGTGAGGTATGGCCACTGAGGATTTTTGCT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTCTGTTGCTAGCACCTaGCTTTCATACTATATCCTT +
Preference number: 2 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFSVAST*LSYYIL
Trigger: AAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTATGATAGTAGTATTCTaGGTGACAAGCAGCACACTG +
Preference number: 2 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSMIVVF*VTSSTL
Trigger: CAGTGTGCTGCTTGTCACCCAGAATACTACTATCAT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CAA 90 bp AAAATACTGTTTACGAATGGTGAAGAACACCTGCTGAAGGAGTTCTaGGAATTATCTGCAACATCTGTACTGGACATTCTGAGAGCTTCA +
Preference number: 2 (lower is better)
Translates to: KILFTNGEEHLLKEF*ELSATSVLDILRAS
Trigger: TGAAGCTCTCAGAATGTCCAGTACAGATGTTGCAGATAATTCCAAGAACTCCTTCAGCAGGTGTTCTTCACCATTCGTAAACAGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTCCACAGAATGCAGTATaGCTGGAAGAGGCAAAACAA +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSPQNAV*LEEAKQ
Trigger: TTGTTTTGCCTCTTCCAGGCATACTGCATTCTGTGG...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATAGCAAAAATCCTCAGTaGCCATACCTCACTCCCCTA +
Preference number: 2 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNSKNPQ*PYLTPL
Trigger: TAGGGGAGTGAGGTATGGCCACTGAGGATTTTTGCT...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGGTAAATCTACACTCTTaGTTCAATTTATCACTGTCC +
Preference number: 2 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQVNLHS*FNLSLS
Trigger: GGACAGTGATAAATTGAACCAAGAGTGTAGATTTAC...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CAA 90 bp TCCCTGTCTAGCAGTATAAAGCATATTGGGCTCAGAATTTGTCTGTaGCTAGCACCTGGCTTTCATACTATATCCTTATCAAATAATCAG +
Preference number: 2 (lower is better)
Translates to: SLSSSIKHIGLRICL*LAPGFHTISLSNNQ
Trigger: CTGATTATTTGATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCAATATGCTTTATACTGCTAGACAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCTACAGATTTCTGTGTaGAGAGAATACGCTGTTCAC +
Preference number: 2 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFLQISV*REYAVH
Trigger: GTGAACAGCGTATTCTCTTCACACAGAAATCTGTAG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCACTGGAAATTGTCATaGTGCACATTACCAACACAG +
Preference number: 2 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFHWKLS*CTLPTQ
Trigger: CTGTGTTGGTAATGTGCATCATGACAATTTCCAGTG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTCAAATGAAAGACAGGTaGAAACACACCAATCCCTGT +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSQMKDR*KHTNPC
Trigger: ACAGGGATTGGTGTGTTTGCACCTGTCTTTCATTTG...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGTACTGATTATAAACTaGATGTGTTTGGTGTCAGCA +
Preference number: 2 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSVLIIN*MCLVSA
Trigger: TGCTGACACCAAACACATCCAGTTTATAATCAGTAC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCACTGGAAATTGTCATaGTGCACATTACCAACACAG +
Preference number: 2 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNHWKLS*CTLPTQ
Trigger: CTGTGTTGGTAATGTGCATCATGACAATTTCCAGTG...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTTTAACAAATACAACATaGGTAAGTGCTCCTCCTCTC +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSLTNTT*VSAPPL
Trigger: GAGAGGAGGAGCACTTACTCATGTTGTATTTGTTAA...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCAAATGAAAGACAGGTaGAAACACACCAATCCCTGT +
Preference number: 2 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNQMKDR*KHTNPC
Trigger: ACAGGGATTGGTGTGTTTGCACCTGTCTTTCATTTG...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTTTAGCATCTAACAAGTaGACTCTAGTTCCAGCATCT +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSLASNK*TLVPAS
Trigger: AGATGCTGGAACTAGAGTGCACTTGTTAGATGCTAA...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTAGAATGCAGTATGCCTaGAAGAGGCAAAACAAGTAT +
Preference number: 2 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSRMQYA*KRQNKY
Trigger: ATACTTGTTTTGCCTCTTCCAGGCATACTGCATTCT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTCTGTTGCTAGCACCTaGCTTTCATACTATATCCTT +
Preference number: 2 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNSVAST*LSYYIL
Trigger: AAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTTCAATGCTTCACAATaGGAAAAAGCCACAGCTCAT +
Preference number: 2 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNFNASQ*EKATAH
Trigger: ATGAGCTGTGGCTTTTTCCCATTGTGAAGCATTGAA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR TCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTAAGGAAAAGACACTaGCGACAAAAAGAATTCACA +
Preference number: 2 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNLRKRH*RQKEFT
Trigger: TGTGAATTCTTTTTGTCGTCAGTGTCTTTTCCTTAG...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR GCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCCCCATAAAAAGTTATaGACTGGTTCTACATCAATA +
Preference number: 2 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNPHKKL*TGSTSI
Trigger: TATTGATGTAGAACCAGTGCATAACTTTTTATGGGG...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CCA 72 bp CCATATCATGGCCCCGTCCCCCTGCACTCTTCCCTTTaGAAGGCTGAGTTACAACCCTGTCCCAGAAGATTC +
Preference number: 3 (lower is better)
Translates to: PYHGPVPLHSSL*KAELQPCPRRF
Trigger: GAATCTTCTGGGACAGGGTTGTAACTCAGCCTTCCAAAGGGAAGAGTGCAGGGGGACGGGGCCATGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 72 bp TGGCCCCGTCCCCCTGCACTCTTCCCTTTGGAAGGCTaGGTTACAACCCTGTCCCAGAAGATTCAGAATTTT +
Preference number: 3 (lower is better)
Translates to: WPRPPALFPLEG*VTTLSQKIQNF
Trigger: AAAATTCTGAATCTTCTGGGACAGGGTTGTAACTCAGCCTTCCAAAGGGAAGAGTGCAGGGGGACGGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACTCCCCTGCCTGCAGTaGAAACAAAAGCAGTTTGAC +
Preference number: 3 (lower is better)
Translates to: SCFLSLISPTSSSSPSLELPCLQ*KQKQFD
Trigger: GTCAAACTGCTTTTGTTTCAACTGCAGGCAGGGGAG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTCACATGGCGTCCTTTaGCTCCCCTGCCTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQSHGVL*LPCLQL
Trigger: CAACTGCAGGCAGGGGAGCAAAAGGACGCCATGTGA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTATTGGGCTCAGAATTaGTCTGTTGCTAGCACCTGG +
Preference number: 3 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAYWAQN*SVASTW
Trigger: CCAGGTGCTAGCAACAGACAAATTCTGAGCCCAATA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCTCAGAATTTGTCTGTaGCTAGCACCTGGCTTTCAT +
Preference number: 3 (lower is better)
Translates to: QIVGKAASSVSLVQPAPALRICL*LAPGFH
Trigger: ATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAG...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTCACATGGCGTCCTTTaGCTCCCCTGCCTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSSHGVL*LPCLQL
Trigger: CAACTGCAGGCAGGGGAGCAAAAGGACGCCATGTGA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTCACATGGCGTCCTTTaGCTCCCCTGCCTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFSHGVL*LPCLQL
Trigger: CAACTGCAGGCAGGGGAGCAAAAGGACGCCATGTGA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CCA 72 bp TTATTCAGTTCCCATCACCCTCATCAAAGAGCTGTCTaGGCGGATGTGACATTCTTTGAGCTTATAGTGCAG +
Preference number: 3 (lower is better)
Translates to: LFSSHHPHQRAV*ADVTFFELIVQ
Trigger: CTGCACTATAAGCTCAAAGAATGTCACATCCGCCCAGACAGCTCTTTGATGAGGGTGATGGGAACTGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTATTGGGCTCAGAATTaGTCTGTTGCTAGCACCTGG +
Preference number: 3 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFYWAQN*SVASTW
Trigger: CCAGGTGCTAGCAACAGACAAATTCTGAGCCCAATA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTCTCCCCTGCCTGCAGTaGAAACAAAAGCAGTTTGAC +
Preference number: 3 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSLPCLQ*KQKQFD
Trigger: GTCAAACTGCTTTTGTTTCAACTGCAGGCAGGGGAG...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR GCA 72 bp ATGACATCCTCCATTAACAAATACAACATGAGTAAGTaGTCCTCCTCTCCCGCTTCCATAAAGCTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: MTSSINKYNMSK*SSSPASIKLSG
Trigger: TCCAGAGAGCTTTATGGAAGCGGGAGAGGAGGAGCACTTACTCATGTTGTATTTGTTAATGGAGGATGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CCA 72 bp CACACACACACACACACACACACACACACACATTTCTaGAGATGTTCTCTGCCTATCTTTGGGACTATGAAA +
Preference number: 3 (lower is better)
Translates to: HTHTHTHTHTHF*RCSLPIFGTMK
Trigger: TTTCATAGTCCCAAAGATAGGCAGAGAACATCTCCAGAAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTATTGGCGACAAGGATTaGGGTGCCTTCAAACTTCTG +
Preference number: 3 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSIGDKD*GAFKLL
Trigger: CAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAAT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 72 bp TCATCAAAGAGCTGTCTGGGCGGATGTGACATTCTTTaGGCTTATAGTGCAGATAATGTGCTGGGTTTTGTT +
Preference number: 3 (lower is better)
Translates to: SSKSCLGGCDIL*AYSADNVLGFV
Trigger: AACAAAACCCAGCACATTATCTGCACTATAAGCTCAAAGAATGTCACATCCGCCCAGACAGCTCTTTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTCCCTCTGCATTCATTaGACTTTTGAGAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQSLCIH*TFERRM
Trigger: CATTCTTCTCTCAAAAGTCAAATGAATGCAGAGGGA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCTCCCCTGCCTGCAGTaGAAACAAAAGCAGTTTGAC +
Preference number: 3 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFLPCLQ*KQKQFD
Trigger: GTCAAACTGCTTTTGTTTCAACTGCAGGCAGGGGAG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CCA 72 bp GTAAAGCTGTACTTCAGGAGATTGGCGACAAGGATTTaGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAAA +
Preference number: 3 (lower is better)
Translates to: VKLYFRRLATRI*VPSNFWSLKQK
Trigger: TTTCTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCTGAAGTACAGCTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTTATTGGGCTCAGAATTaGTCTGTTGCTAGCACCTGG +
Preference number: 3 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSYWAQN*SVASTW
Trigger: CCAGGTGCTAGCAACAGACAAATTCTGAGCCCAATA...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATACCGAGAAGCAGTGCTaGGATCTGGTGAGCAAAGAT +
Preference number: 3 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNTEKQC*DLVSKD
Trigger: ATCTTTGCTCACCAGATCCAAGCACTGCTTCTCGGT...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTCTCAGAATTTGTCTGTaGCTAGCACCTGGCTTTCAT +
Preference number: 3 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSLRICL*LAPGFH
Trigger: ATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAG...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 72 bp TTAAAATACTGTTTACGAATGGTGAAGAACACCTGCTaGAGGAGTTCTTGGAATTATCTGCAACATCTGTAC +
Preference number: 3 (lower is better)
Translates to: LKYCLRMVKNTC*RSSWNYLQHLY
Trigger: GTACAGATGTTGCAGATAATTCCAAGAACTCCTTCAGCAGGTGTTCTTCACCATTCGTAAACAGTATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTCCCTCTGCATTCATTaGACTTTTGAGAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNSLCIH*TFERRM
Trigger: CATTCTTCTCTCAAAAGTCAAATGAATGCAGAGGGA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR-3UTR CAA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTATAAACTGGATGTGTTaGGTGTCAGCACAACTTAAA +
Preference number: 3 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSINWMC*VSAQLK
Trigger: TTTAAGTTGTGCTGACACCAAACACATCCAGTTTAT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 72 bp ATTTCTGGAGATGTTCTCTGCCTATCTTTGGGACTATaGAAGTTGCACTCAACAATTCATTTCTACAACTTT +
Preference number: 3 (lower is better)
Translates to: ISGDVLCLSLGL*KLHSTIHFYNF
Trigger: AAAGTTGTAGAAATGAATTGTTGAGTGCAACTTTCATAGTCCCAAAGATAGGCAGAGAACATCTCCAGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR TCA 72 bp TCCCAGAAGATTCAGAATTTTAAATACGTGGTCTGCTaGTCAACATTTATTTTTCCTCAAACCTCAGTACTA +
Preference number: 3 (lower is better)
Translates to: SQKIQNFKYVVC*STFIFPQTSVL
Trigger: TAGTACTGAGGTTTGAGGAAAAATAAATGTTGATCAGCAGACCACGTATTTAAAATTCTGAATCTTCTGGGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACCTCCTCCCTGTGAGTaGAGCGGGGTCTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEPPPCE*SGVCPV
Trigger: CACAGGGCAGACCCCGCTGCACTCACAGGGAGGAGG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAGCGGGGTCTGCCCTGTaGAACCACCATACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEAGSAL*NHHTSP
Trigger: GGGACTGGTATGGTGGTTCCACAGGGCAGACCCCGC...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTGCGGGGTCTGCCCTGTaGAACCACCATACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAAGSAL*NHHTSP
Trigger: GGGACTGGTATGGTGGTTCCACAGGGCAGACCCCGC...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATTCTCAACCAGCCAGTaGTGGTCCAGAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEFSTSQ*WSRGPR
Trigger: CCTGGGCCCTCTGGACCACCACTGGCTGGTTGAGAA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACCAGAGGGCCCAGGATaGCTAAGGTGTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEPEGPG*LRCSAE
Trigger: CTCAGCTGAACACCTTAGGCATCCTGGGCCCTCTGG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTATGGCCCCGTCCCCCTaGACTCTTCCCTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAMAPSP*TLPFGR
Trigger: CCTTCCAAAGGGAAGAGTGCAGGGGGACGGGGCCAT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTTCTCAACCAGCCAGTaGTGGTCCAGAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAFSTSQ*WSRGPR
Trigger: CCTGGGCCCTCTGGACCACCACTGGCTGGTTGAGAA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CAA 72 bp CAAGCAGCACACTGCAATGACACCGAGAAGCAGTGCTaGGATCTGGTGAGCAAAGATCCAGGGACTCACCCT +
Preference number: 4 (lower is better)
Translates to: QAAHCNDTEKQC*DLVSKDPGTHP
Trigger: AGGGTGAGTCCCTGGATCTTTGCTCACCAGATCCAAGCACTGCTTCTCGGTGTCATTGCAGTGTGCTGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTGAAGGCCACAGGTGTTaGTTAGCAGGCTCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAEGHRC*LAGSSG
Trigger: CCCCGAAGAGCCTGCTAACCAACACCTGTGGCCTTC...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTCCTCTGAAGGTGCTTaGCTACCTCCTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPASSEGA*LPPARK
Trigger: CTTCCTGGCAGGAGGTAGTCAAGCACCTTCAGAGGA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATTCCCTTTGGAAGGCTaGGTTACAACCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEFPLEG*VTTLSQ
Trigger: CTGGGACAGGGTTGTAACTCAGCCTTCCAAAGGGAA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAAAGCTTGGCAATGTCTaGAGGAATTCGGGACAGGGA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEKLGNV*RNSGQG
Trigger: TCCCTGTCCCGAATTCCTTCAGACATTGCCAAGCTT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTCCTCCTCCCTGTGAGTaGAGCGGGGTCTGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSPPPCE*SGVCPV
Trigger: CACAGGGCAGACCCCGCTGCACTCACAGGGAGGAGG...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAGACACCGAGAAGCAGTaGTTGGATCTGGTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEDTEKQ*LDLVSK
Trigger: TTTGCTCACCAGATCCAAGCACTGCTTCTCGGTGTC...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTATGGAGCTCCCTGAGTaGTACCATGTTTCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAMELPE*YHVSEF
Trigger: GAACTCGGAAACATGGTATCACTCAGGGAGCTCCAT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGGGTGCGGGCAGCCACTaGTGTTATTCTCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQGAGSH*CYSQPA
Trigger: GGCTGGTTGAGAATAACATCAGTGGCTGCCCGCACC...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTGAGTGCAGCGGGGTCTaGCCTGTGGAACCACCATAC +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFECSGV*PVEPPY
Trigger: GTATGGTGGTTCCACAGGGCAGACCCCGCTGCACTC...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTATGGCCCCGTCCCCCTaGACTCTTCCCTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFMAPSP*TLPFGR
Trigger: CCTTCCAAAGGGAAGAGTGCAGGGGGACGGGGCCAT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGCGGGGTCTGCCCTGTaGAACCACCATACCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSAGSAL*NHHTSP
Trigger: GGGACTGGTATGGTGGTTCCACAGGGCAGACCCCGC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCTGCACTCTTCCCTTTaGAAGGCTGAGTTACAACCC +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPALHSSL*KAELQP
Trigger: GGGTTGTAACTCAGCCTTCCAAAGGGAAGAGTGCAG...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATGCAAAGCTGTCAGGTaGGTTAGTGACCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLECKAVR*VSDHKD
Trigger: ATCTTTGTGGTCACTAACTCACCTGACAGCTTTGCA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCGGTGCGGGCAGCCACTaGTGTTATTCTCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIGAGSH*CYSQPA
Trigger: GGCTGGTTGAGAATAACATCAGTGGCTGCCCGCACC...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGAGTGCAGCGGGGTCTaGCCTGTGGAACCACCATAC +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSECSGV*PVEPPY
Trigger: GTATGGTGGTTCCACAGGGCAGACCCCGCTGCACTC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCCAGAGGGCCCAGGATaGCTAAGGTGTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFPEGPG*LRCSAE
Trigger: CTCAGCTGAACACCTTAGGCATCCTGGGCCCTCTGG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCCCAGAGGGCCCAGGATaGCTAAGGTGTTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIPEGPG*LRCSAE
Trigger: CTCAGCTGAACACCTTAGGCATCCTGGGCCCTCTGG...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTGCACAGATTTTCTCTaGATGCACAGGCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPACTDFL*MHRQCL
Trigger: CAAGCACTGCCTGTGCATGCAGAGAAAATCTGTGCA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACCACAGAATGCAGTATaGCTGGAAGAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEPQNAV*LEEAKQ
Trigger: TTGTTTTGCCTCTTCCAGGCATACTGCATTCTGTGG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTATGGCCCCGTCCCCCTaGACTCTTCCCTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSMAPSP*TLPFGR
Trigger: CCTTCCAAAGGGAAGAGTGCAGGGGGACGGGGCCAT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATGTAACTTGAAACCATaGGTGATCCTTCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLECNLKP*VILPLV
Trigger: CACCAATGGAAGGATCACTCATGGTTTCAAGTTACA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCTCCTCTGAAGGTGCTTaGCTACCTCCTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILISSEGA*LPPARK
Trigger: CTTCCTGGCAGGAGGTAGTCAAGCACCTTCAGAGGA...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTCCTCTGAAGGTGCTTaGCTACCTCCTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYSSEGA*LPPARK
Trigger: CTTCCTGGCAGGAGGTAGTCAAGCACCTTCAGAGGA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGATCAAGGCTGTCCTCTaGAGGTGCTTGACTACCTCC +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQIKAVL*RCLTTS
Trigger: GGAGGTAGTCAAGCACCTTCAGAGGACAGCCTTGAT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACTACAGATTTCTGTGTaGAGAGAATACGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLELQISV*REYAVH
Trigger: GTGAACAGCGTATTCTCTTCACACAGAAATCTGTAG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAAAGTTGCCTCTGGTCTaGAAACATCCTAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEKLPLV*KHPKVE
Trigger: TTCAACCTTAGGATGTTTTCAGACCAGAGGCAACTT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAGTGCTTGGATCTGGTaGGCAAAGATCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQSAWIW*AKIQGL
Trigger: GAGTCCCTGGATCTTTGCTCACCAGATCCAAGCACT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATGCATGCACAGGCAGTaGTTGGTGAGAACAAATTTA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLECMHRQ*LVRTNL
Trigger: TAAATTTGTTCTCACCAAGCACTGCCTGTGCATGCA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGGCTCGTATTTTTCTTTaGGCATGCCTCTCGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQARIFL*ACLSGC
Trigger: GCACCCCGAGAGGCATGCCCAAAGAAAAATACGAGC...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261951.9
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTAGAAAACAAGGCAGTTaGCCTTGTCCTATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPARKQGS*PCPIWF
Trigger: GAACCAGATAGGACAAGGCCAACTGCCTTGTTTTCT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTGGATGCCGTTGACTTaGGGCAGGAAAGGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQWMPLT*GRKGSK
Trigger: CTTACTGCCTTTCCTGCCCCAAGTCAACGGCATCCA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTGGAAGAATGATCTCTaGATGTTGCTACTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAWKNDL*MLLLAS
Trigger: TGAGGCCAGTAGCAACATCCAGAGATCATTCTTCCA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCATCAAAGAGCTGTCTaGGCGGATGTGACATTCTTT +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAHQRAV*ADVTFF
Trigger: AAAGAATGTCACATCCGCCCAGACAGCTCTTTGATG...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGAAGGCCACAGGTGTTaGTTAGCAGGCTCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSEGHRC*LAGSSG
Trigger: CCCCGAAGAGCCTGCTAACCAACACCTGTGGCCTTC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACAGCTCAAGATTTCTTaGATAATGGCCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEQLKIS*IMAFFL
Trigger: CAGGAAAAAGGCCATTATTCAAGAAATCTTGAGCTG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATTTCCTTTCTTGTTCTaGCATTGTCCTAGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEFPFLF*HCPSSR
Trigger: TCTAGAGCTAGGACAATGTCAGAACAAGAAAGGAAA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTGTAACTTGAAACCATaGGTGATCCTTCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPACNLKP*VILPLV
Trigger: CACCAATGGAAGGATCACTCATGGTTTCAAGTTACA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCATCAAGGCTGTCCTCTaGAGGTGCTTGACTACCTCC +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIIKAVL*RCLTTS
Trigger: GGAGGTAGTCAAGCACCTTCAGAGGACAGCCTTGAT...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCAGTGCTTGGATCTGGTaGGCAAAGATCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILISAWIW*AKIQGL
Trigger: GAGTCCCTGGATCTTTGCTCACCAGATCCAAGCACT...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCAGCAGCACACTGCAATaGCACCGAGAAGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILISSTLQ*HREAVL
Trigger: AAGCACTGCTTCTCGGTGTCATTGCAGTGTGCTGCT...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTAGCAGCACACTGCAATaGCACCGAGAAGCAGTGCTT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFSSTLQ*HREAVL
Trigger: AAGCACTGCTTCTCGGTGTCATTGCAGTGTGCTGCT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATTAACAAATACAACATaGGTAAGTGCTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLELTNTT*VSAPPL
Trigger: GAGAGGAGGAGCACTTACTCATGTTGTATTTGTTAA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCTTCCCTTTGGAAGGCTaGGTTACAACCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIFPLEG*VTTLSQ
Trigger: CTGGGACAGGGTTGTAACTCAGCCTTCCAAAGGGAA...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAGTGCAGCGGGGTCTaGCCTGTGGAACCACCATAC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFECSGV*PVEPPY
Trigger: GTATGGTGGTTCCACAGGGCAGACCCCGCTGCACTC...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTACTTATTTCAAGCTCTaGCCAGTGGGATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPATYFKL*PVGFLS
Trigger: GGAAAGAAATCCCACTGGGCAGAGCTTGAAATAAGT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGGACACCGAGAAGCAGTaGTTGGATCTGGTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQDTEKQ*LDLVSK
Trigger: TTTGCTCACCAGATCCAAGCACTGCTTCTCGGTGTC...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATAGCAAACAAGCATCATaGCGGCGGCCGCCGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNSKQAS*RRPPSL
Trigger: GAGGGACGGCGGCCGCCGCCATGATGCTTGTTTGCT...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261951.9
CDS-3UTR CCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAAGGTTCAATATATCCTaGGTAAGGGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLERFNIS*VRGFPF
Trigger: GAAAGGAAATCCCCTTACCCAGGATATATTGAACCT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTTCTCAACCAGCCAGTaGTGGTCCAGAGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFFSTSQ*WSRGPR
Trigger: CCTGGGCCCTCTGGACCACCACTGGCTGGTTGAGAA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCGCAAAAAGTGAGAAGTaGTCAGAGGGGATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIAKSEK*SEGMRG
Trigger: CCCCCTCATCCCCTCTGACCACTTCTCACTTTTTGC...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCTGGATGCCGTTGACTTaGGGCAGGAAAGGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIWMPLT*GRKGSK
Trigger: CTTACTGCCTTTCCTGCCCCAAGTCAACGGCATCCA...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCTCCTGCCAGGAAGGTaGATGCCGTTGACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFLLPGR*MPLTWG
Trigger: GCCCCAAGTCAACGGCATCCACCTTCCTGGCAGGAG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATCTGTTGCTAGCACCTaGCTTTCATACTATATCCTT +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLESVAST*LSYYIL
Trigger: AAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCTGCACTCTTCCCTTTaGAAGGCTGAGTTACAACCC +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQLHSSL*KAELQP
Trigger: GGGTTGTAACTCAGCCTTCCAAAGGGAAGAGTGCAG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACATGGAGCTCCCTGAGTaGTACCATGTTTCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYMELPE*YHVSEF
Trigger: GAACTCGGAAACATGGTATCACTCAGGGAGCTCCAT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCAGCTCAAGATTTCTTaGATAATGGCCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAQLKIS*IMAFFL
Trigger: CAGGAAAAAGGCCATTATTCAAGAAATCTTGAGCTG...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGGTGCGGGCAGCCACTaGTGTTATTCTCAACCAGCC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFGAGSH*CYSQPA
Trigger: GGCTGGTTGAGAATAACATCAGTGGCTGCCCGCACC...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACTATCTTTGGGACTATaGAAGTTGCACTCAACAATT +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLELSLGL*KLHSTI
Trigger: AATTGTTGAGTGCAACTTTCATAGTCCCAAAGATAG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATTTATTGGTTGGCTATaGGTAGGAAAATACATCGGT +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEFIGWL*VGKYIG
Trigger: ACCGATGTATTTTCCTACTCATAGCCAACCAATAAA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTATTTTTCTTTGGGCATaGCTCTCGGGGTGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSIFLWA*LSGCAA
Trigger: GGCGGCGCACCCCGAGAGGCATGCCCAAAGAAAAAT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261951.9
CDS-3UTR GCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTTAGCATCTAACAAGTaGACTCTAGTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPALASNK*TLVPAS
Trigger: AGATGCTGGAACTAGAGTGCACTTGTTAGATGCTAA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTAGGTTGTTATTTAAATaGAGCTCCCTGAGTGATACC +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPARLLFK*SSLSDT
Trigger: GGTATCACTCAGGGAGCTCCATTTAAATAACAACCT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGCAAAAAGTGAGAAGTaGTCAGAGGGGATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSAKSEK*SEGMRG
Trigger: CCCCCTCATCCCCTCTGACCACTTCTCACTTTTTGC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTGGATGCCGTTGACTTaGGGCAGGAAAGGCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSWMPLT*GRKGSK
Trigger: CTTACTGCCTTTCCTGCCCCAAGTCAACGGCATCCA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTCCTGCCAGGAAGGTaGATGCCGTTGACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNLLPGR*MPLTWG
Trigger: GCCCCAAGTCAACGGCATCCACCTTCCTGGCAGGAG...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCTTCCTAATGCTCACATaGCGTCCTTTTGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIFLMLT*RPFAPL
Trigger: CAGGGGAGCAAAAGGACGCCATGTGAGCATTAGGAA...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTTCCTAATGCTCACATaGCGTCCTTTTGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFFLMLT*RPFAPL
Trigger: CAGGGGAGCAAAAGGACGCCATGTGAGCATTAGGAA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTTCCTAATGCTCACATaGCGTCCTTTTGCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYFLMLT*RPFAPL
Trigger: CAGGGGAGCAAAAGGACGCCATGTGAGCATTAGGAA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAGTACTGATTATAAACTaGATGTGTTTGGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEVLIIN*MCLVSA
Trigger: TGCTGACACCAAACACATCCAGTTTATAATCAGTAC...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTAGAATGCAGTATGCCTaGAAGAGGCAAAACAAGTAT +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPARMQYA*KRQNKY
Trigger: ATACTTGTTTTGCCTCTTCCAGGCATACTGCATTCT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCCAGTTGTGCAAAAAGTaGGAAGTGGTCAGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIQLCKK*EVVRGD
Trigger: ATCCCCTCTGACCACTTCTCACTTTTTGCACAACTG...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCTATCTTTGGGACTATaGAAGTTGCACTCAACAATT +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPALSLGL*KLHSTI
Trigger: AATTGTTGAGTGCAACTTTCATAGTCCCAAAGATAG...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTGCTTGACTACCTCCTaGCAGGAAGGTGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFCLTTS*QEGGCR
Trigger: ACGGCATCCACCTTCCTGGCAGGAGGTAGTCAAGCA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTTGCTTGACTACCTCCTaGCAGGAAGGTGGATGCCGT +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSCLTTS*QEGGCR
Trigger: ACGGCATCCACCTTCCTGGCAGGAGGTAGTCAAGCA...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTGCACAGATTTTCTCTaGATGCACAGGCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYCTDFL*MHRQCL
Trigger: CAAGCACTGCCTGTGCATGCAGAGAAAATCTGTGCA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCGACAAGGATTTGGGTaGCTTCAAACTTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQRQGFG*LQTSGL
Trigger: AAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACAAGAGTTAGTCCAGTaGATCACACAATATAATGTA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEQELVQ*ITQYNV
Trigger: TACATTATATTGTGTGATGCACTGGACTAACTCTTG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAATTTTTCTTTGGGCATaGACAGTAACAACAAATCCA +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEIFLWA*TVTTNP
Trigger: TGGATTTGTTGTTACTGTGCATGCCCAAAGAAAAAT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTTCTGTTCCAAGATGTaGCTTTCCGGACGGCATTTC +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYFCSKM*LSGRHF
Trigger: GAAATGCCGTCCGGAAAGCCACATCTTGGAACAGAA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTTCTGTTCCAAGATGTaGCTTTCCGGACGGCATTTC +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFFCSKM*LSGRHF
Trigger: GAAATGCCGTCCGGAAAGCCACATCTTGGAACAGAA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTAGCAAAAATCCTCAGTaGCCATACCTCACTCCCCTA +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFSKNPQ*PYLTPL
Trigger: TAGGGGAGTGAGGTATGGCCACTGAGGATTTTTGCT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAGTAAATCTACACTCTTaGTTCAATTTATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEVNLHS*FNLSLS
Trigger: GGACAGTGATAAATTGAACCAAGAGTGTAGATTTAC...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCTTGGCGACAAGGATTTaGGTGCCTTCAAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILILATRI*VPSNFW
Trigger: CCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAA...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCATCAAAGAGCTGTCTaGGCGGATGTGACATTCTTT +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQHQRAV*ADVTFF
Trigger: AAAGAATGTCACATCCGCCCAGACAGCTCTTTGATG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTGCAAAGCTGTCAGGTaGGTTAGTGACCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFCKAVR*VSDHKD
Trigger: ATCTTTGTGGTCACTAACTCACCTGACAGCTTTGCA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTATCAAGGCTGTCCTCTaGAGGTGCTTGACTACCTCC +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSIKAVL*RCLTTS
Trigger: GGAGGTAGTCAAGCACCTTCAGAGGACAGCCTTGAT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTAGTGCTTGGATCTGGTaGGCAAAGATCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFSAWIW*AKIQGL
Trigger: GAGTCCCTGGATCTTTGCTCACCAGATCCAAGCACT...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCACTGGAAATTGTCATaGTGCACATTACCAACACAG +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQHWKLS*CTLPTQ
Trigger: CTGTGTTGGTAATGTGCATCATGACAATTTCCAGTG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACAGCTCTCTGGACCTGTaGTTACATAATGCAGATCGT +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYSSLDL*LHNADR
Trigger: ACGATCTGCATTATGTAATCACAGGTCCAGAGAGCT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTTTCCCTTTGGAAGGCTaGGTTACAACCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSFPLEG*VTTLSQ
Trigger: CTGGGACAGGGTTGTAACTCAGCCTTCCAAAGGGAA...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTAGAGCTCGAGCGAGATaGCCATTCACAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSRARAR*PFTTLS
Trigger: TGACAGCGTTGTGAATGGTCATCTCGCTCGAGCTCT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTAGAGCTCGAGCGAGATaGCCATTCACAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFRARAR*PFTTLS
Trigger: TGACAGCGTTGTGAATGGTCATCTCGCTCGAGCTCT...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCCCCATAAAAAGTTATaGACTGGTTCTACATCAATA +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAPHKKL*TGSTSI
Trigger: TATTGATGTAGAACCAGTGCATAACTTTTTATGGGG...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCCCACAGAATGCAGTATaGCTGGAAGAGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIPQNAV*LEEAKQ
Trigger: TTGTTTTGCCTCTTCCAGGCATACTGCATTCTGTGG...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACCGACAAGGATTTGGGTaGCTTCAAACTTCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYRQGFG*LQTSGL
Trigger: AAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCG...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTATAGTGCAGATAATGTaGTGGGTTTTGTTACATGAA +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAIVQIM*WVLLHE
Trigger: TTCATGTAACAAAACCCAGCACATTATCTGCACTAT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTCAAGCTCTGCCCAGTaGGATTTCTTTCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFSSSAQ*DFFPFA
Trigger: AGCAAATGGAAAGAAATCCCACTGGGCAGAGCTTGA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCCAAGACCTTGGAGGTaGTTGTTCTGTTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQPRPWR*LFCCNS
Trigger: AGAATTACAACAGAACAACCACCTCCAAGGTCTTGG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACAGAAAACAAGGCAGTTaGCCTTGTCCTATCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYRKQGS*PCPIWF
Trigger: GAACCAGATAGGACAAGGCCAACTGCCTTGTTTTCT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTTCTGTTCCAAGATGTaGCTTTCCGGACGGCATTTC +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSFCSKM*LSGRHF
Trigger: GAAATGCCGTCCGGAAAGCCACATCTTGGAACAGAA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGCAAAAAGTGAGAAGTaGTCAGAGGGGATGAGGGGG +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFAKSEK*SEGMRG
Trigger: CCCCCTCATCCCCTCTGACCACTTCTCACTTTTTGC...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCTGGAAGAATGATCTCTaGATGTTGCTACTGGCCTCA +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIWKNDL*MLLLAS
Trigger: TGAGGCCAGTAGCAACATCCAGAGATCATTCTTCCA...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTGTAAATCTACACTCTTaGTTCAATTTATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAVNLHS*FNLSLS
Trigger: GGACAGTGATAAATTGAACCAAGAGTGTAGATTTAC...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCATCATAGTCTATTTTaGTGTGACTGTTCATTACCT +
Preference number: 4 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAHHSLF*CDCSLP
Trigger: AGGTAATGAACAGTCACACCAAAATAGACTATGATG...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCCATCAAAGAGCTGTCTaGGCGGATGTGACATTCTTT +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIHQRAV*ADVTFF
Trigger: AAAGAATGTCACATCCGCCCAGACAGCTCTTTGATG...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTACTGCCAGTCCGTATaGTTTATTCAGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQYCQSV*FIQFPS
Trigger: TGATGGGAACTGAATAAACCATACGGACTGGCAGTA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CAA 72 bp GGTAAAGCTGTACTTCAGGAGATTGGCGACAAGGATTaGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: GKAVLQEIGDKD*GAFKLLVFKTE
Trigger: TTCTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCTGAAGTACAGCTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTCCCCCTCGTTTTCATTaGAAGCAAACAAGCATCATG +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSPPRFH*KQTSIM
Trigger: CATGATGCTTGTTTGCTTTCAATGAAAACGAGGGGG...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261951.9
CDS-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAAATACACCAGATTGTaGAGCTTGGCAATGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQKYTRL*SLAMSE
Trigger: TTCAGACATTGCCAAGCTTCACAATCTGGTGTATTT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTATGGAGCTCCCTGAGTaGTACCATGTTTCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFMELPE*YHVSEF
Trigger: GAACTCGGAAACATGGTATCACTCAGGGAGCTCCAT...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTGTAACTTGAAACCATaGGTGATCCTTCCATTGGTG +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFCNLKP*VILPLV
Trigger: CACCAATGGAAGGATCACTCATGGTTTCAAGTTACA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCTACAGATTTCTGTGTaGAGAGAATACGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFLQISV*REYAVH
Trigger: GTGAACAGCGTATTCTCTTCACACAGAAATCTGTAG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACAAGTTGCCTCTGGTCTaGAAACATCCTAAGGTTGAA +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYKLPLV*KHPKVE
Trigger: TTCAACCTTAGGATGTTTTCAGACCAGAGGCAACTT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTCCCCTGCCTGCAGTTaGAACAAAAGCAGTTTGACC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFSPACS*NKSSLT
Trigger: GGTCAAACTGCTTTTGTTTCAACTGCAGGCAGGGGA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCCACTGGAAATTGTCATaGTGCACATTACCAACACAG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIHWKLS*CTLPTQ
Trigger: CTGTGTTGGTAATGTGCATCATGACAATTTCCAGTG...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTAGCTCTCTGGACCTGTaGTTACATAATGCAGATCGT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSSSLDL*LHNADR
Trigger: ACGATCTGCATTATGTAATCACAGGTCCAGAGAGCT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCGTGAAGAACACCTGCTaGAGGAGTTCTTGGAATTAT +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIVKNTC*RSSWNY
Trigger: ATAATTCCAAGAACTCCTTCAGCAGGTGTTCTTCAC...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTACTGTTTACGAATGGTaGAGAACACCTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSTVYEW*RTPAEG
Trigger: TCCTTCAGCAGGTGTTCTTCACCATTCGTAAACAGT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCACTTATTTCAAGCTCTaGCCAGTGGGATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILITYFKL*PVGFLS
Trigger: GGAAAGAAATCCCACTGGGCAGAGCTTGAAATAAGT...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTATTCAGGGTCCCAATaGATGTGGGCGTTAGCCACA +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFYSGSQ*MWALAT
Trigger: TGTGGCTAACGCCCACATGCATTGGGACCCTGAATA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCAAATGAAAGACAGGTaGAAACACACCAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFQMKDR*KHTNPC
Trigger: ACAGGGATTGGTGTGTTTGCACCTGTCTTTCATTTG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTGCATGCACAGGCAGTaGTTGGTGAGAACAAATTTA +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYCMHRQ*LVRTNL
Trigger: TAAATTTGTTCTCACCAAGCACTGCCTGTGCATGCA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCTGCATGCACAGGCAGTaGTTGGTGAGAACAAATTTA +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILICMHRQ*LVRTNL
Trigger: TAAATTTGTTCTCACCAAGCACTGCCTGTGCATGCA...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTACAACATGAGTAAGTaGTCCTCCTCTCCCGCTTCC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFYNMSK*SSSPAS
Trigger: GGAAGCGGGAGAGGAGGAGCACTTACTCATGTTGTA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTTAGCATCTAACAAGTaGACTCTAGTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQLASNK*TLVPAS
Trigger: AGATGCTGGAACTAGAGTGCACTTGTTAGATGCTAA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTCAAGCTCTGCCCAGTaGGATTTCTTTCCATTTGCT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSSSSAQ*DFFPFA
Trigger: AGCAAATGGAAAGAAATCCCACTGGGCAGAGCTTGA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCCAGATTGTGAAGCTTaGCAATGTCTGAAGGAATTC +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFPDCEA*QCLKEF
Trigger: GAATTCCTTCAGACATTGCCAAGCTTCACAATCTGG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCCCGTCTTGTTCCATCTaGTTCCTGATAAAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIPSCSI*FLIKVQ
Trigger: TTGAACCTTTATCAGGAACCAGATGGAACAAGACGG...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCCGTCTTGTTCCATCTaGTTCCTGATAAAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFPSCSI*FLIKVQ
Trigger: TTGAACCTTTATCAGGAACCAGATGGAACAAGACGG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCCCAAGACCTTGGAGGTaGTTGTTCTGTTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIPRPWR*LFCCNS
Trigger: AGAATTACAACAGAACAACCACCTCCAAGGTCTTGG...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCATAATCCAAGACCTTaGAGGTGGTTGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFHNPRP*RWLFCC
Trigger: ACAACAGAACAACCACCTCCAAGGTCTTGGATTATG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACGGAGGGAGTAAAGTATaGAAGAATGATCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYGGSKV*KNDLWM
Trigger: CATCCAGAGATCATTCTTCCATACTTTACTCCCTCC...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTTCAATGCTTCACAATaGGAAAAAGCCACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQFNASQ*EKATAH
Trigger: ATGAGCTGTGGCTTTTTCCCATTGTGAAGCATTGAA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCATGATAGTAGTATTCTaGGTGACAAGCAGCACACTG +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIMIVVF*VTSSTL
Trigger: CAGTGTGCTGCTTGTCACCCAGAATACTACTATCAT...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTTCTCTGCCTATCTTTaGGACTATGAAAGTTGCACT +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQFSAYL*DYESCT
Trigger: AGTGCAACTTTCATAGTCCCAAAGATAGGCAGAGAA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTACACACACACATTTCTaGAGATGTTCTCTGCCTATC +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFTHTHF*RCSLPI
Trigger: GATAGGCAGAGAACATCTCCAGAAATGTGTGTGTGT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACACACACACACATTTCTaGAGATGTTCTCTGCCTATC +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYTHTHF*RCSLPI
Trigger: GATAGGCAGAGAACATCTCCAGAAATGTGTGTGTGT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTACTGCCAGTCCGTATaGTTTATTCAGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFYCQSV*FIQFPS
Trigger: TGATGGGAACTGAATAAACCATACGGACTGGCAGTA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTCTGCACTCTTCCCTTTaGAAGGCTGAGTTACAACCC +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSLHSSL*KAELQP
Trigger: GGGTTGTAACTCAGCCTTCCAAAGGGAAGAGTGCAG...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CAA 72 bp TTTACGAATGGTGAAGAACACCTGCTGAAGGAGTTCTaGGAATTATCTGCAACATCTGTACTGGACATTCTG +
Preference number: 4 (lower is better)
Translates to: FTNGEEHLLKEF*ELSATSVLDIL
Trigger: CAGAATGTCCAGTACAGATGTTGCAGATAATTCCAAGAACTCCTTCAGCAGGTGTTCTTCACCATTCGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCTTTCCTTTCTTGTTCTaGCATTGTCCTAGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIFPFLF*HCPSSR
Trigger: TCTAGAGCTAGGACAATGTCAGAACAAGAAAGGAAA...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCAGTTGTGCAAAAAGTaGGAAGTGGTCAGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFQLCKK*EVVRGD
Trigger: ATCCCCTCTGACCACTTCTCACTTTTTGCACAACTG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCTAAGGAAAAGACACTaGCGACAAAAAGAATTCACA +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQLRKRH*RQKEFT
Trigger: TGTGAATTCTTTTTGTCGTCAGTGTCTTTTCCTTAG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCTATCTTTGGGACTATaGAAGTTGCACTCAACAATT +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQLSLGL*KLHSTI
Trigger: AATTGTTGAGTGCAACTTTCATAGTCCCAAAGATAG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGTGAAGAACACCTGCTaGAGGAGTTCTTGGAATTAT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSVKNTC*RSSWNY
Trigger: ATAATTCCAAGAACTCCTTCAGCAGGTGTTCTTCAC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACGGATTTCTTTCCATTTaGTGCTTCCTCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYGFLSI*CFLRRH
Trigger: ATGTCTTCTGAGGAAGCAGCAAATGGAAAGAAATCC...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTACTTATTTCAAGCTCTaGCCAGTGGGATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSTYFKL*PVGFLS
Trigger: GGAAAGAAATCCCACTGGGCAGAGCTTGAAATAAGT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTATTCAGGGTCCCAATaGATGTGGGCGTTAGCCACA +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNYSGSQ*MWALAT
Trigger: TGTGGCTAACGCCCACATGCATTGGGACCCTGAATA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTCAAATGAAAGACAGGTaGAAACACACCAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSQMKDR*KHTNPC
Trigger: ACAGGGATTGGTGTGTTTGCACCTGTCTTTCATTTG...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATGACACCGAGAAGCAGTaGTTGGATCTGGTGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNDTEKQ*LDLVSK
Trigger: TTTGCTCACCAGATCCAAGCACTGCTTCTCGGTGTC...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGGTTCTTGGAATTATCTaGAACATCTGTACTGGACAT +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQVLGII*NICTGH
Trigger: ATGTCCAGTACAGATGTTGCAGATAATTCCAAGAAC...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTAAAAGCCCTTGTTACTaGCAGTCCGTATGGTTTATT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFKSPCY*QSVWFI
Trigger: AATAAACCATACGGACTGGCAGTAACAAGGGCTTTT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTCCAGATTGTGAAGCTTaGCAATGTCTGAAGGAATTC +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSPDCEA*QCLKEF
Trigger: GAATTCCTTCAGACATTGCCAAGCTTCACAATCTGG...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACAGGTTGTTATTTAAATaGAGCTCCCTGAGTGATACC +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYRLLFK*SSLSDT
Trigger: GGTATCACTCAGGGAGCTCCATTTAAATAACAACCT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTAGGTTGTTATTTAAATaGAGCTCCCTGAGTGATACC +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFRLLFK*SSLSDT
Trigger: GGTATCACTCAGGGAGCTCCATTTAAATAACAACCT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTAGGTTCAATATATCCTaGGTAAGGGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFRFNIS*VRGFPF
Trigger: GAAAGGAAATCCCCTTACCCAGGATATATTGAACCT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTTCAATGCTTCACAATaGGAAAAAGCCACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFFNASQ*EKATAH
Trigger: ATGAGCTGTGGCTTTTTCCCATTGTGAAGCATTGAA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTTTCTCTGCCTATCTTTaGGACTATGAAAGTTGCACT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFFSAYL*DYESCT
Trigger: AGTGCAACTTTCATAGTCCCAAAGATAGGCAGAGAA...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACGTGCAGATAATGTGCTaGGTTTTGTTACATGAATGG +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYVQIMC*VLLHEW
Trigger: CCATTCATGTAACAAAACCCAGCACATTATCTGCAC...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTCACAACGCTGTCAATaGCAACAACAGTTAAAAACA +
Preference number: 4 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQSQRCQ*QQQLKT
Trigger: TGTTTTTAACTGTTGTTGCCATTGACAGCGTTGTGA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTCAGCTCAAGATTTCTTaGATAATGGCCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSQLKIS*IMAFFL
Trigger: CAGGAAAAAGGCCATTATTCAAGAAATCTTGAGCTG...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCTAAGGAAAAGACACTaGCGACAAAAAGAATTCACA +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFLRKRH*RQKEFT
Trigger: TGTGAATTCTTTTTGTCGTCAGTGTCTTTTCCTTAG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTTAACAAATACAACATaGGTAAGTGCTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSLTNTT*VSAPPL
Trigger: GAGAGGAGGAGCACTTACTCATGTTGTATTTGTTAA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTACTGTTTACGAATGGTaGAGAACACCTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSTVYEW*RTPAEG
Trigger: TCCTTCAGCAGGTGTTCTTCACCATTCGTAAACAGT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTTTATTGGTTGGCTATaGGTAGGAAAATACATCGGT +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYFIGWL*VGKYIG
Trigger: ACCGATGTATTTTCCTACTCATAGCCAACCAATAAA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTTTCTACTCCACCTGTaGTCAAATATTCTACAACAC +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYFLLHL*SNILQH
Trigger: GTGTTGTAGAATATTTGAGCACAGGTGGAGTAGAAA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTGTTCTTGGAATTATCTaGAACATCTGTACTGGACAT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFVLGII*NICTGH
Trigger: ATGTCCAGTACAGATGTTGCAGATAATTCCAAGAAC...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTAAAAGCCCTTGTTACTaGCAGTCCGTATGGTTTATT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSKSPCY*QSVWFI
Trigger: AATAAACCATACGGACTGGCAGTAACAAGGGCTTTT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTAGGTTCAATATATCCTaGGTAAGGGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSRFNIS*VRGFPF
Trigger: GAAAGGAAATCCCCTTACCCAGGATATATTGAACCT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTCTGTTGCTAGCACCTaGCTTTCATACTATATCCTT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSSVAST*LSYYIL
Trigger: AAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTTCAATGCTTCACAATaGGAAAAAGCCACAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSFNASQ*EKATAH
Trigger: ATGAGCTGTGGCTTTTTCCCATTGTGAAGCATTGAA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCGTACTGATTATAAACTaGATGTGTTTGGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIVLIIN*MCLVSA
Trigger: TGCTGACACCAAACACATCCAGTTTATAATCAGTAC...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTAGAATGCAGTATGCCTaGAAGAGGCAAAACAAGTAT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSRMQYA*KRQNKY
Trigger: ATACTTGTTTTGCCTCTTCCAGGCATACTGCATTCT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTTGGCGACAAGGATTTaGGTGCCTTCAAACTTCTGG +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNLATRI*VPSNFW
Trigger: CCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTTCTCTGCCTATCTTTaGGACTATGAAAGTTGCACT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSFSAYL*DYESCT
Trigger: AGTGCAACTTTCATAGTCCCAAAGATAGGCAGAGAA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGCTCGTATTTTTCTTTaGGCATGCACAGTAACAACA +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSARIFL*ACTVTT
Trigger: TGTTGTTACTGTGCATGCCCAAAGAAAAATACGAGC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTGCAAAGCTGTCAGGTaGGTTAGTGACCACAAAGAT +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNCKAVR*VSDHKD
Trigger: ATCTTTGTGGTCACTAACTCACCTGACAGCTTTGCA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGTGAAGAACACCTGCTaGAGGAGTTCTTGGAATTAT +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFVKNTC*RSSWNY
Trigger: ATAATTCCAAGAACTCCTTCAGCAGGTGTTCTTCAC...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATACTGTTTACGAATGGTaGAGAACACCTGCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNTVYEW*RTPAEG
Trigger: TCCTTCAGCAGGTGTTCTTCACCATTCGTAAACAGT...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTGGATGTGACATTCTTTaGGCTTATAGTGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSGCDIL*AYSADN
Trigger: ATTATCTGCACTATAAGCTCAAAGAATGTCACATCC...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTTACGATATCAGCATTaGAGCTCAAGATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYLRYQH*SSRFLE
Trigger: TTCAAGAAATCTTGAGCTGCAATGCTGATATCGTAA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCCAAGAGTTAGTCCAGTaGATCACACAATATAATGTA +
Preference number: 4 (lower is better)
Translates to: WAQNLSVASTWLSYYILIQELVQ*ITQYNV
Trigger: TACATTATATTGTGTGATGCACTGGACTAACTCTTG...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTATAGTGCAGATAATGTaGTGGGTTTTGTTACATGAA +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFIVQIM*WVLLHE
Trigger: TTCATGTAACAAAACCCAGCACATTATCTGCACTAT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCCAGATTGTGAAGCTTaGCAATGTCTGAAGGAATTC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFPDCEA*QCLKEF
Trigger: GAATTCCTTCAGACATTGCCAAGCTTCACAATCTGG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCATAATCCAAGACCTTaGAGGTGGTTGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFHNPRP*RWLFCC
Trigger: ACAACAGAACAACCACCTCCAAGGTCTTGGATTATG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTGGAGGGAGTAAAGTATaGAAGAATGATCTCTGGATG +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSGGSKV*KNDLWM
Trigger: CATCCAGAGATCATTCTTCCATACTTTACTCCCTCC...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACGTAAATCTACACTCTTaGTTCAATTTATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYVNLHS*FNLSLS
Trigger: GGACAGTGATAAATTGAACCAAGAGTGTAGATTTAC...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACCATCATAGTCTATTTTaGTGTGACTGTTCATTACCT +
Preference number: 4 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYHHSLF*CDCSLP
Trigger: AGGTAATGAACAGTCACACCAAAATAGACTATGATG...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCATCATAGTCTATTTTaGTGTGACTGTTCATTACCT +
Preference number: 4 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFHHSLF*CDCSLP
Trigger: AGGTAATGAACAGTCACACCAAAATAGACTATGATG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTACTGCCAGTCCGTATaGTTTATTCAGTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFYCQSV*FIQFPS
Trigger: TGATGGGAACTGAATAAACCATACGGACTGGCAGTA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
3UTR CAA 72 bp AGCAGTATAAAGCATATTGGGCTCAGAATTTGTCTGTaGCTAGCACCTGGCTTTCATACTATATCCTTATCA +
Preference number: 4 (lower is better)
Translates to: SSIKHIGLRICL*LAPGFHTISLS
Trigger: TGATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCAATATGCTTTATACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTAAATACACCAGATTGTaGAGCTTGGCAATGTCTGAA +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSKYTRL*SLAMSE
Trigger: TTCAGACATTGCCAAGCTTCACAATCTGGTGTATTT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTTAACAAATACAACATaGGTAAGTGCTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFLTNTT*VSAPPL
Trigger: GAGAGGAGGAGCACTTACTCATGTTGTATTTGTTAA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTGGATTTCTTTCCATTTaGTGCTTCCTCAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSGFLSI*CFLRRH
Trigger: ATGTCTTCTGAGGAAGCAGCAAATGGAAAGAAATCC...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCCGTCTTGTTCCATCTaGTTCCTGATAAAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNPSCSI*FLIKVQ
Trigger: TTGAACCTTTATCAGGAACCAGATGGAACAAGACGG...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCCAAGACCTTGGAGGTaGTTGTTCTGTTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNPRPWR*LFCCNS
Trigger: AGAATTACAACAGAACAACCACCTCCAAGGTCTTGG...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTCTGTTGCTAGCACCTaGCTTTCATACTATATCCTT +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFSVAST*LSYYIL
Trigger: AAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATATGATAGTAGTATTCTaGGTGACAAGCAGCACACTG +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNMIVVF*VTSSTL
Trigger: CAGTGTGCTGCTTGTCACCCAGAATACTACTATCAT...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGTGCAGATAATGTGCTaGGTTTTGTTACATGAATGG +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFVQIMC*VLLHEW
Trigger: CCATTCATGTAACAAAACCCAGCACATTATCTGCAC...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTGGATGTGACATTCTTTaGGCTTATAGTGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSGCDIL*AYSADN
Trigger: ATTATCTGCACTATAAGCTCAAAGAATGTCACATCC...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTTTTCTACTCCACCTGTaGTCAAATATTCTACAACAC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFFLLHL*SNILQH
Trigger: GTGTTGTAGAATATTTGAGCACAGGTGGAGTAGAAA...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTTAGCATCTAACAAGTaGACTCTAGTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNLASNK*TLVPAS
Trigger: AGATGCTGGAACTAGAGTGCACTTGTTAGATGCTAA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGTTCTTGGAATTATCTaGAACATCTGTACTGGACAT +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFVLGII*NICTGH
Trigger: ATGTCCAGTACAGATGTTGCAGATAATTCCAAGAAC...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTAACGAAAATCCTAAATaGAAAAGGACCATCAGTTGC +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFNENPK*KRTISC
Trigger: GCAACTGATGGTCCTTTTGCATTTAGGATTTTCGTT...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR TCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTTTATTGGTTGGCTATaGGTAGGAAAATACATCGGT +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNFIGWL*VGKYIG
Trigger: ACCGATGTATTTTCCTACTCATAGCCAACCAATAAA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCCCCATAAAAAGTTATaGACTGGTTCTACATCAATA +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFPHKKL*TGSTSI
Trigger: TATTGATGTAGAACCAGTGCATAACTTTTTATGGGG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTCAAGAGTTAGTCCAGTaGATCACACAATATAATGTA +
Preference number: 4 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFQELVQ*ITQYNV
Trigger: TACATTATATTGTGTGATGCACTGGACTAACTCTTG...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTATAGTGCAGATAATGTaGTGGGTTTTGTTACATGAA +
Preference number: 4 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSIVQIM*WVLLHE
Trigger: TTCATGTAACAAAACCCAGCACATTATCTGCACTAT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATAACGAAAATCCTAAATaGAAAAGGACCATCAGTTGC +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNNENPK*KRTISC
Trigger: GCAACTGATGGTCCTTTTGCATTTAGGATTTTCGTT...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATGTACTGATTATAAACTaGATGTGTTTGGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNVLIIN*MCLVSA
Trigger: TGCTGACACCAAACACATCCAGTTTATAATCAGTAC...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTCACAACGCTGTCAATaGCAACAACAGTTAAAAACA +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNSQRCQ*QQQLKT
Trigger: TGTTTTTAACTGTTGTTGCCATTGACAGCGTTGTGA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
3UTR CAA 72 bp TCCTCTTTTGAAGGTTACACTTGTAAATCTACACTCTaGGTTCAATTTATCACTGTCCAAATAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SSFEGYTCKSTL*VQFITVQIRWR
Trigger: TCTCCACCTTATTTGGACAGTGATAAATTGAACCAAGAGTGTAGATTTACAAGTGTAACCTTCAAAAGAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR GCA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATTTACGATATCAGCATTaGAGCTCAAGATTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNLRYQH*SSRFLE
Trigger: TTCAAGAAATCTTGAGCTGCAATGCTGATATCGTAA...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS CCA 90 bp CGCTGCCGCCTCCTCCTCCCTGTGAGTGCAGCGGGGTCTGCCCTGTaGAACCACCATACCAGTCCCGCCCGCTGCTGCAGCGCCGCCACC +
Preference number: 5 (lower is better)
Translates to: RCRLLLPVSAAGSAL*NHHTSPARCCSAAT
Trigger: GGTGGCGGCGCTGCAGCAGCGGGCGGGACTGGTATGGTGGTTCCACAGGGCAGACCCCGCTGCACTCACAGGGAGGAGGAGGCGGCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000507016.1
ENST00000510148.1
ENST00000618123.4
CDS GCA 90 bp TCTGCCGCCTTAGTCGCTGCTCTTTGTTCCCCCTCCGAGAGCCACTaGTTCGGCTGCCCGCCGCTGCCTTCGCCTCCGCGCCGCCGTCGC +
Preference number: 5 (lower is better)
Translates to: SAALVAALCSPSESH*FGCPPLPSPPRRRR
Trigger: GCGACGGCGGCGCGGAGGCGAAGGCAGCGGCGGGCAGCCGAAGCAGTGGCTCTCGGAGGGGGAACAAAGAGCAGCGACTAAGGCGGCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393356.7
CDS CCA 90 bp CAAGGCTGTCCTCTGAAGGTGCTTGACTACCTCCTGCCAGGAAGGTaGATGCCGTTGACTTGGGGCAGGAAAGGCAGTAAGAGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: QGCPLKVLDYLLPGR*MPLTWGRKGSKSSS
Trigger: ACTGGAGCTCTTACTGCCTTTCCTGCCCCAAGTCAACGGCATCCACCTTCCTGGCAGGAGGTAGTCAAGCACCTTCAGAGGACAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAGGAAGGTGGATGCCGTaGACTTGGGGCAGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEGRWMP*TWGRKG
Trigger: GCCTTTCCTGCCCCAAGTCAACGGCATCCACCTTCC...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTGGAAGGTGGATGCCGTaGACTTGGGGCAGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAGRWMP*TWGRKG
Trigger: GCCTTTCCTGCCCCAAGTCAACGGCATCCACCTTCC...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAATCACATGGCGTCCTTTaGCTCCCCTGCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: SCFLSLISPTSSSSPSLESHGVL*LPCLQL
Trigger: CAACTGCAGGCAGGGGAGCAAAAGGACGCCATGTGA...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS CCA 90 bp AAGGTGCTTGACTACCTCCTGCCAGGAAGGTGGATGCCGTTGACTTaGGGCAGGAAAGGCAGTAAGAGCTCCAGTTGTGCAAAAAGTGAG +
Preference number: 5 (lower is better)
Translates to: KVLDYLLPGRWMPLT*GRKGSKSSSCAKSE
Trigger: CTCACTTTTTGCACAACTGGAGCTCTTACTGCCTTTCCTGCCCCAAGTCAACGGCATCCACCTTCCTGGCAGGAGGTAGTCAAGCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTTCACATGGCGTCCTTTaGCTCCCCTGCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QIVGKAASSVSLVQPAPASHGVL*LPCLQL
Trigger: CAACTGCAGGCAGGGGAGCAAAAGGACGCCATGTGA...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS TCA 90 bp TTTCACAAGTTTACAAGTGAATCAAGGCTGTCCTCTGAAGGTGCTTaGCTACCTCCTGCCAGGAAGGTGGATGCCGTTGACTTGGGGCAG +
Preference number: 5 (lower is better)
Translates to: FHKFTSESRLSSEGA*LPPARKVDAVDLGQ
Trigger: CTGCCCCAAGTCAACGGCATCCACCTTCCTGGCAGGAGGTAGTCAAGCACCTTCAGAGGACAGCCTTGATTCACTTGTAAACTTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCGGAAGGTGGATGCCGTaGACTTGGGGCAGGAAAGGC +
Preference number: 5 (lower is better)
Translates to: WAQNLSVASTWLSYYILIGRWMP*TWGRKG
Trigger: GCCTTTCCTGCCCCAAGTCAACGGCATCCACCTTCC...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAATTCGGGACAGGGAATaGTCACTCAAATGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEIRDRE*SLKCKA
Trigger: AGCTTTGCATTTGAGTGACAATTCCCTGTCCCGAAT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTATTGGCGACAAGGATTaGGGTGCCTTCAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAIGDKD*GAFKLL
Trigger: CAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAAT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTAGAAGGCCACAGGTGTaGGTTAGCAGGCTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFRRPQV*VSRLFG
Trigger: CCCGAAGAGCCTGCTAACCAACACCTGTGGCCTTCT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAGGCTCGTATTTTTCTTaGGGCATGCACAGTAACAAC +
Preference number: 5 (lower is better)
Translates to: SCFLSLISPTSSSSPSLEGSYFS*GMHSNN
Trigger: GTTGTTACTGTGCATGCCCAAAGAAAAATACGAGCC...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS CCA 90 bp CGCTGTCAATGGCAACAACAGTTAAAAACAGAAGGCCACAGGTGTTaGTTAGCAGGCTCTTCGGGGAAGGTGAAGGAGGTAAAGAATCAA +
Preference number: 5 (lower is better)
Translates to: RCQWQQQLKTEGHRC*LAGSSGKVKEVKNQ
Trigger: TTGATTCTTTACCTCCTTCACCTTCCCCGAAGAGCCTGCTAACCAACACCTGTGGCCTTCTGTTTTTAACTGTTGTTGCCATTGACAGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTGGCTCGTATTTTTCTTaGGGCATGCCTCTCGGGGTG +
Preference number: 5 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFGSYFS*GMPLGV
Trigger: CACCCCGAGAGGCATGCCCAAAGAAAAATACGAGCC...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261951.9
CDS-3UTR CAA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAAACACTGGATTTGAGGTaGCGAGAGGCTTTATCAATA +
Preference number: 5 (lower is better)
Translates to: SCFLSLISPTSSSSPSLETLDLR*REALSI
Trigger: TATTGATAAAGCCTCTCGCAACCTCAAATCCAGTGT...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACTGCTGAAGGAGTTCTaGGAATTATCTGCAACATCT +
Preference number: 5 (lower is better)
Translates to: SCFLSLISPTSSSSPSLELLKEF*ELSATS
Trigger: AGATGTTGCAGATAATTCCAAGAACTCCTTCAGCAG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGACCGAGAAGCAGTGCTaGGATCTGGTGAGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQTEKQC*DLVSKD
Trigger: ATCTTTGCTCACCAGATCCAAGCACTGCTTCTCGGT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTCACCTTCACTGGAACTAGCTAATTACAATTaGACCAAGAAGGTTCCACTG +
Preference number: 5 (lower is better)
Translates to: SCFLSLISPTSSSSPSLELANYN*TKKVPL
Trigger: CAGTGGAACCTTCTTGGTCAAATTGTAATTAGCTAG...TTCCAGTGAAGGTGAGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS CCA 90 bp AAATCCAAAGAGCTCGAGCGAGATGACCATTCACAACGCTGTCAATaGCAACAACAGTTAAAAACAGAAGGCCACAGGTGTTGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: KSKELERDDHSQRCQ*QQQLKTEGHRCWLA
Trigger: TGCTAACCAACACCTGTGGCCTTCTGTTTTTAACTGTTGTTGCCATTGACAGCGTTGTGAATGGTCATCTCGCTCGAGCTCTTTGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTAGACCTTGGAGGTGGTaGTTCTGTTGTAATTCTTTT +
Preference number: 5 (lower is better)
Translates to: QIVGKAASSVSLVQPAPARPWRW*FCCNSF
Trigger: AAAAGAATTACAACAGAACAACCACCTCCAAGGTCT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGCAGAAAACAAGGCAGTaGGCCTTGTCCTATCTGGTT +
Preference number: 5 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQQKTRQ*ALSYLV
Trigger: AACCAGATAGGACAAGGCCAACTGCCTTGTTTTCTG...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTGAGGAACATCATAGTTaGTACCAACTTCACATCAGA +
Preference number: 5 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAEEHHS*YQLHIR
Trigger: TCTGATGTGAAGTTGGTACAAACTATGATGTTCCTC...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGTATTGGGCTCAGAATTaGTCTGTTGCTAGCACCTGG +
Preference number: 5 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQYWAQN*SVASTW
Trigger: CCAGGTGCTAGCAACAGACAAATTCTGAGCCCAATA...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCACCGAGAAGCAGTGCTaGGATCTGGTGAGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: WAQNLSVASTWLSYYILITEKQC*DLVSKD
Trigger: ATCTTTGCTCACCAGATCCAAGCACTGCTTCTCGGT...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACCTCCCCTGCCTGCAGTaGAAACAAAAGCAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYLPCLQ*KQKQFD
Trigger: GTCAAACTGCTTTTGTTTCAACTGCAGGCAGGGGAG...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS TCA 90 bp GGAATTCGGGACAGGGAATTGTCACTCAAATGCAAAGCTGTCAGGTaGGTTAGTGACCACAAAGATGCGCTTAAGCTTCTTACTTTTCCA +
Preference number: 5 (lower is better)
Translates to: GIRDRELSLKCKAVR*VSDHKDALKLLTFP
Trigger: TGGAAAAGTAAGAAGCTTAAGCGCATCTTTGTGGTCACTAACTCACCTGACAGCTTTGCATTTGAGTGACAATTCCCTGTCCCGAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000502447.1
ENST00000618123.4
CDS-3UTR CAA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCAGAAAACAAGGCAGTaGGCCTTGTCCTATCTGGTT +
Preference number: 5 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFQKTRQ*ALSYLV
Trigger: AACCAGATAGGACAAGGCCAACTGCCTTGTTTTCTG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTACCGAGAAGCAGTGCTaGGATCTGGTGAGCAAAGAT +
Preference number: 5 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSTEKQC*DLVSKD
Trigger: ATCTTTGCTCACCAGATCCAAGCACTGCTTCTCGGT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp CAGATCGTAGGAAAAGCTGCTTCCTCAGTCTCATTAGTCCAACCAGCTCCAGCTATAAACTGGATGTGTTaGGTGTCAGCACAACTTAAA +
Preference number: 5 (lower is better)
Translates to: QIVGKAASSVSLVQPAPAINWMC*VSAQLK
Trigger: TTTAAGTTGTGCTGACACCAAACACATCCAGTTTAT...AGCTGGAGCTGGTTGGACTAATGAGACTGAGGAAGCAGCTTTTCCTACGATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCATTGGCGACAAGGATTaGGGTGCCTTCAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: WAQNLSVASTWLSYYILIIGDKD*GAFKLL
Trigger: CAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAAT...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAAAACGGTGCTGTCATaGTTTTGCCTAGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQKTVLS*FCLAWL
Trigger: AAGCCAAGCTAGGCAAAACAATGACAGCACCGTTTT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACATTCGGGACAGGGAATaGTCACTCAAATGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYIRDRE*SLKCKA
Trigger: AGCTTTGCATTTGAGTGACAATTCCCTGTCCCGAAT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACCTCAGAATTTGTCTGTaGCTAGCACCTGGCTTTCAT +
Preference number: 5 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYLRICL*LAPGFH
Trigger: ATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAG...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACAAAACGGTGCTGTCATaGTTTTGCCTAGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYKTVLS*FCLAWL
Trigger: AAGCCAAGCTAGGCAAAACAATGACAGCACCGTTTT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCAAAACGGTGCTGTCATaGTTTTGCCTAGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: WAQNLSVASTWLSYYILIKTVLS*FCLAWL
Trigger: AAGCCAAGCTAGGCAAAACAATGACAGCACCGTTTT...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTATTCGGGACAGGGAATaGTCACTCAAATGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSIRDRE*SLKCKA
Trigger: AGCTTTGCATTTGAGTGACAATTCCCTGTCCCGAAT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTACACTGGATTTGAGGTaGCGAGAGGCTTTATCAATA +
Preference number: 5 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFTLDLR*REALSI
Trigger: TATTGATAAAGCCTCTCGCAACCTCAAATCCAGTGT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTCTCCCCTGCCTGCAGTaGAAACAAAAGCAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSLPCLQ*KQKQFD
Trigger: GTCAAACTGCTTTTGTTTCAACTGCAGGCAGGGGAG...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACCTGCTGAAGGAGTTCTaGGAATTATCTGCAACATCT +
Preference number: 5 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYLLKEF*ELSATS
Trigger: AGATGTTGCAGATAATTCCAAGAACTCCTTCAGCAG...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACAGACCTTGGAGGTGGTaGTTCTGTTGTAATTCTTTT +
Preference number: 5 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYRPWRW*FCCNSF
Trigger: AAAAGAATTACAACAGAACAACCACCTCCAAGGTCT...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTACAAGGCAGTTGGCCTaGTCCTATCTGGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFTRQLA*SYLVLV
Trigger: TACAAGAACCAGATAGGACAAGGCCAACTGCCTTGT...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTACAAGGCAGTTGGCCTaGTCCTATCTGGTTCTTGTA +
Preference number: 5 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSTRQLA*SYLVLV
Trigger: TACAAGAACCAGATAGGACAAGGCCAACTGCCTTGT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AGGAGATTGGCGACAAGGATTTGGGTGCCTTCAAACTTCTGGTCTTTAAAACAGAGCCACAAGAATAAGTaGTTTTTCTGTTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: RRLATRIWVPSNFWSLKQSHKNK*FFCSKM
Trigger: CATCTTGGAACAGAAAAACAACTTATTCTTGTGGCT...CTGTTTTAAAGACCAGAAGTTTGAAGGCACCCAAATCCTTGTCGCCAATCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TGGGCTCAGAATTTGTCTGTTGCTAGCACCTGGCTTTCATACTATATCCTTATCGAGGAACATCATAGTTaGTACCAACTTCACATCAGA +
Preference number: 5 (lower is better)
Translates to: WAQNLSVASTWLSYYILIEEHHS*YQLHIR
Trigger: TCTGATGTGAAGTTGGTACAAACTATGATGTTCCTC...GATAAGGATATAGTATGAAAGCCAGGTGCTAGCAACAGACAAATTCTGAGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp AAATCCTCAGTGGCCATACCTCACTCCCCTATGTTCAGATTTTCACAAGTTTACTCCCTCTGCATTCATTaGACTTTTGAGAGAAGAATG +
Preference number: 5 (lower is better)
Translates to: KSSVAIPHSPMFRFSQVYSLCIH*TFERRM
Trigger: CATTCTTCTCTCAAAAGTCAAATGAATGCAGAGGGA...GTAAACTTGTGAAAATCTGAACATAGGGGAGTGAGGTATGGCCACTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTCTGCTGAAGGAGTTCTaGGAATTATCTGCAACATCT +
Preference number: 5 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSLLKEF*ELSATS
Trigger: AGATGTTGCAGATAATTCCAAGAACTCCTTCAGCAG...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTCTAGCTAATTACAATTaGACCAAGAAGGTTCCACTG +
Preference number: 5 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFLANYN*TKKVPL
Trigger: CAGTGGAACCTTCTTGGTCAAATTGTAATTAGCTAG...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTTCCCTCTGCATTCATTaGACTTTTGAGAGAAGAATG +
Preference number: 5 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSSLCIH*TFERRM
Trigger: CATTCTTCTCTCAAAAGTCAAATGAATGCAGAGGGA...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp ACAGGAAGTGTCTCAAAAAGAGTTAAGAAGCTGGACCTAAGCAGCTGTAGGTTTATAAACTGGATGTGTTaGGTGTCAGCACAACTTAAA +
Preference number: 5 (lower is better)
Translates to: TGSVSKRVKKLDLSSCRFINWMC*VSAQLK
Trigger: TTTAAGTTGTGCTGACACCAAACACATCCAGTTTAT...AAACCTACAGCTGCTTAGGTCCAGCTTCTTAACTCTTTTTGAGACACTTCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TATTTTGGTGTGACTGTTCATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGGCTCGTATTTTTCTTaGGGCATGCACAGTAACAAC +
Preference number: 5 (lower is better)
Translates to: YFGVTVHYLQTPNSSSSFGSYFS*GMHSNN
Trigger: GTTGTTACTGTGCATGCCCAAAGAAAAATACGAGCC...AAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAATGAACAGTCACACCAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTAGCCACAAGAATAAGTaGTTTTTCTGTTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSSHKNK*FFCSKM
Trigger: CATCTTGGAACAGAAAAACAACTTATTCTTGTGGCT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTACACTGGATTTGAGGTaGCGAGAGGCTTTATCAATA +
Preference number: 5 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSTLDLR*REALSI
Trigger: TATTGATAAAGCCTCTCGCAACCTCAAATCCAGTGT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TTGCCTAGCTTGGCTTTAGTCCTTATATATGACCCCAAAACCTTACAAGTCAGTATAAACTGGATGTGTTaGGTGTCAGCACAACTTAAA +
Preference number: 5 (lower is better)
Translates to: LPSLALVLIYDPKTLQVSINWMC*VSAQLK
Trigger: TTTAAGTTGTGCTGACACCAAACACATCCAGTTTAT...ACTGACTTGTAAGGTTTTGGGGTCATATATAAGGACTAAAGCCAAGCTAGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTAGAACTCGTAACAGGTaGTTATTTAAATGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSRTRNR*LFKWSS
Trigger: GGAGCTCCATTTAAATAACAACCTGTTACGAGTTCT...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp TACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTGAGGAACATCATAGTTaGTACCAACTTCACATCAGA +
Preference number: 5 (lower is better)
Translates to: YLQTPNSSSSFEGYTCKSEEHHS*YQLHIR
Trigger: TCTGATGTGAAGTTGGTACAAACTATGATGTTCCTC...AGATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS-3UTR CAA 90 bp ATTACCTACAGACCCCAAATAGTTCTTCCTCTTTTGAAGGTTACACTTGTAAATCTAGCTAATTACAATTaGACCAAGAAGGTTCCACTG +
Preference number: 5 (lower is better)
Translates to: ITYRPQIVLPLLKVTLVNLANYN*TKKVPL
Trigger: CAGTGGAACCTTCTTGGTCAAATTGTAATTAGCTAG...ATTTACAAGTGTAACCTTCAAAAGAGGAAGAACTATTTGGGGTCTGTAGGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS GCA 72 bp CCGCCACCGCCGCCGCTCCTCTGCCGCCTTAGTCGCTaGTCTTTGTTCCCCCTCCGAGAGCCACTGCTTCGG +
Preference number: 6 (lower is better)
Translates to: PPPPPLLCRLSR*SLFPLREPLLR
Trigger: CCGAAGCAGTGGCTCTCGGAGGGGGAACAAAGAGCAGCGACTAAGGCGGCAGAGGAGCGGCGGCGGTGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000507016.1
ENST00000510148.1
ENST00000618123.4
CDS GCA 72 bp CTGCCGCCTCCTCCTCCCTGTGAGTGCAGCGGGGTCTaGCCTGTGGAACCACCATACCAGTCCCGCCCGCTG +
Preference number: 6 (lower is better)
Translates to: LPPPPPCECSGV*PVEPPYQSRPL
Trigger: CAGCGGGCGGGACTGGTATGGTGGTTCCACAGGGCAGACCCCGCTGCACTCACAGGGAGGAGGAGGCGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000507016.1
ENST00000510148.1
ENST00000618123.4
CDS CAA 72 bp CCGCCGCCGCTCCTCTGCCGCCTTAGTCGCTGCTCTTaGTTCCCCCTCCGAGAGCCACTGCTTCGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PPPLLCRLSRCS*FPLREPLLRLP
Trigger: GGGCAGCCGAAGCAGTGGCTCTCGGAGGGGGAACAAAGAGCAGCGACTAAGGCGGCAGAGGAGCGGCGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000507016.1
ENST00000510148.1
ENST00000618123.4
CDS CCA 72 bp CTCCTCCTCCCTGTGAGTGCAGCGGGGTCTGCCCTGTaGAACCACCATACCAGTCCCGCCCGCTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LLLPVSAAGSAL*NHHTSPARCCS
Trigger: GCTGCAGCAGCGGGCGGGACTGGTATGGTGGTTCCACAGGGCAGACCCCGCTGCACTCACAGGGAGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000507016.1
ENST00000510148.1
ENST00000618123.4
CDS CCA 72 bp GACTACCTCCTGCCAGGAAGGTGGATGCCGTTGACTTaGGGCAGGAAAGGCAGTAAGAGCTCCAGTTGTGCA +
Preference number: 6 (lower is better)
Translates to: DYLLPGRWMPLT*GRKGSKSSSCA
Trigger: TGCACAACTGGAGCTCTTACTGCCTTTCCTGCCCCAAGTCAACGGCATCCACCTTCCTGGCAGGAGGTAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS CAA 90 bp CCTCTGAAGGTGCTTGACTACCTCCTGCCAGGAAGGTGGATGCCGTaGACTTGGGGCAGGAAAGGCAGTAAGAGCTCCAGTTGTGCAAAA +
Preference number: 6 (lower is better)
Translates to: PLKVLDYLLPGRWMP*TWGRKGSKSSSCAK
Trigger: TTTTGCACAACTGGAGCTCTTACTGCCTTTCCTGCCCCAAGTCAACGGCATCCACCTTCCTGGCAGGAGGTAGTCAAGCACCTTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS CCA 72 bp TGGCAACAACAGTTAAAAACAGAAGGCCACAGGTGTTaGTTAGCAGGCTCTTCGGGGAAGGTGAAGGAGGTA +
Preference number: 6 (lower is better)
Translates to: WQQQLKTEGHRC*LAGSSGKVKEV
Trigger: TACCTCCTTCACCTTCCCCGAAGAGCCTGCTAACCAACACCTGTGGCCTTCTGTTTTTAACTGTTGTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393356.7
ENST00000618123.4
CDS TCA 72 bp GACAGGGAATTGTCACTCAAATGCAAAGCTGTCAGGTaGGTTAGTGACCACAAAGATGCGCTTAAGCTTCTT +
Preference number: 6 (lower is better)
Translates to: DRELSLKCKAVR*VSDHKDALKLL
Trigger: AAGAAGCTTAAGCGCATCTTTGTGGTCACTAACTCACCTGACAGCTTTGCATTTGAGTGACAATTCCCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000502447.1
ENST00000618123.4
CDS CCA 72 bp ATCAAGCAAATAGTTCAGCAGCCGTCTTGTTCCATCTaGTTCCTGATAAAGGTTCAATATATCCTGGGTAAG +
Preference number: 6 (lower is better)
Translates to: IKQIVQQPSCSI*FLIKVQYILGK
Trigger: CTTACCCAGGATATATTGAACCTTTATCAGGAACCAGATGGAACAAGACGGCTGCTGAACTATTTGCTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000502447.1
ENST00000504343.1
ENST00000618123.4
CDS CAA 90 bp ACAAGTGGAATAGTTCCAAATTCTCCCAAAACACTGGATTTGAGGTaGCGAGAGGCTTTATCAATAATGTTCTTCACTTCTGAGAGGAAC +
Preference number: 6 (lower is better)
Translates to: TSGIVPNSPKTLDLR*REALSIMFFTSERN
Trigger: GTTCCTCTCAGAAGTGAAGAACATTATTGATAAAGCCTCTCGCAACCTCAAATCCAGTGTTTTGGGAGAATTTGGAACTATTCCACTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS CAA 90 bp CATAACACAAGTGGAATAGTTCCAAATTCTCCCAAAACACTGGATTaGAGGTTGCGAGAGGCTTTATCAATAATGTTCTTCACTTCTGAG +
Preference number: 6 (lower is better)
Translates to: HNTSGIVPNSPKTLD*RLREALSIMFFTSE
Trigger: CTCAGAAGTGAAGAACATTATTGATAAAGCCTCTCGCAACCTCAAATCCAGTGTTTTGGGAGAATTTGGAACTATTCCACTTGTGTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS TCA 72 bp GTTGCGAGAGGCTTTATCAATAATGTTCTTCACTTCTaGGAGGAACATCATAGTTTGTACCAACTTCACATC +
Preference number: 6 (lower is better)
Translates to: VARGFINNVLHF*EEHHSLYQLHI
Trigger: GATGTGAAGTTGGTACAAACTATGATGTTCCTCTCAGAAGTGAAGAACATTATTGATAAAGCCTCTCGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS CAA 72 bp AGTGGAATAGTTCCAAATTCTCCCAAAACACTGGATTaGAGGTTGCGAGAGGCTTTATCAATAATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SGIVPNSPKTLD*RLREALSIMFF
Trigger: GAAGAACATTATTGATAAAGCCTCTCGCAACCTCAAATCCAGTGTTTTGGGAGAATTTGGAACTATTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4
CDS CAA 72 bp ATAGTTCCAAATTCTCCCAAAACACTGGATTTGAGGTaGCGAGAGGCTTTATCAATAATGTTCTTCACTTCT +
Preference number: 6 (lower is better)
Translates to: IVPNSPKTLDLR*REALSIMFFTS
Trigger: AGAAGTGAAGAACATTATTGATAAAGCCTCTCGCAACCTCAAATCCAGTGTTTTGGGAGAATTTGGAACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261951.9
ENST00000393356.7
ENST00000618123.4