RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CNKSR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000153721

Ensembl transcript IDs: ENST00000424998.3, ENST00000433165.6, ENST00000454664.2, ENST00000479339.5, ENST00000607772.6

Found 753 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGGCTCACTGCAAGTTGCGCCTCCCGGGTTCACGCCATTCTCCTaGCTCAACCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCACCA +
Preference number: 1 (lower is better)
Translates to: LGSLQVAPPGFTPFS*LNLPSSWDYRRPPP
Trigger: TGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGTTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGCAACTTGCAGTGAGCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp GAGCAAGAGACCAAAATGCAGGGAGTACAGGTGGAAAAGGTCAAGTaGAACGGAGGTGCCCAGGGCAGGAGAGCAGGGCTTCCTGGCAAG +
Preference number: 1 (lower is better)
Translates to: EQETKMQGVQVEKVK*NGGAQGRRAGLPGK
Trigger: CTTGCCAGGAAGCCCTGCTCTCCTGCCCTGGGCACCTCCGTTCCACTTGACCTTTTCCACCTGTACTCCCTGCATTTTGGTCTCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp AGGGTGACTGCAAGTAGAGGAGCCAGGAACTTCTCTCGCGGGTCCTaGGACTCCAGGGAACAAAGGCTGAAAAGCACCAATCTGGTTGGC +
Preference number: 1 (lower is better)
Translates to: RVTASRGARNFSRGS*DSREQRLKSTNLVG
Trigger: GCCAACCAGATTGGTGCTTTTCAGCCTTTGTTCCCTGGAGTCCCAGGACCCGCGAGAGAAGTTCCTGGCTCCTCTACTTGCAGTCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp CTGCAGCTGGGCCAACCATACACACCCAGAGTTCCTAGTTCCTCCTaGCCTTTATGGACTCTGACAAAAGGCCACACTGCAGGGCATAGG +
Preference number: 1 (lower is better)
Translates to: LQLGQPYTPRVPSSS*PLWTLTKGHTAGHR
Trigger: CCTATGCCCTGCAGTGTGGCCTTTTGTCAGAGTCCATAAAGGGCAGGAGGAACTAGGAACTCTGGGTGTGTATGGTTGGCCCAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp AAGGCTAAAGACCAGAGCAAGAGACCAAAATGCAGGGAGTACAGGTaGAAAAGGTCAAGTGGAACGGAGGTGCCCAGGGCAGGAGAGCAG +
Preference number: 1 (lower is better)
Translates to: KAKDQSKRPKCREYR*KRSSGTEVPRAGEQ
Trigger: CTGCTCTCCTGCCCTGGGCACCTCCGTTCCACTTGACCTTTTCCACCTGTACTCCCTGCATTTTGGTCTCTTGCTCTGGTCTTTAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp TCCTGGACCTACCAAAGCCTTGGCCTTGGGTGGGGAGGCATCCAGTaGCTGTCCTTTTCAGCTTCAACAATGGCAACACAATCTCTTGGC +
Preference number: 1 (lower is better)
Translates to: SWTYQSLGLGWGGIQ*LSFSASTMATQSLG
Trigger: GCCAAGAGATTGTGTTGCCATTGTTGAAGCTGAAAAGGACAGTCACTGGATGCCTCCCCACCCAAGGCCAAGGCTTTGGTAGGTCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp CAGGTAAAATATGGCCACATATCCACACCTTCACAGGGCTCTGCCTaGCACACGGAGGACACAATCACAAGAGCCAAAGCAGGGAAGGGG +
Preference number: 1 (lower is better)
Translates to: QVKYGHISTPSQGSA*HTEDTITRAKAGKG
Trigger: CCCCTTCCCTGCTTTGGCTCTTGTGATTGTGTCCTCCGTGTGTCAGGCAGAGCCCTGTGAAGGTGTGGATATGTGGCCATATTTTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp ACTGATGGGCGGCCACTACTGAGATTTAACCTGTTGGAGCATGCGTaGTACACAAGCCCTGCAGCTTACAGCCCTCACAACAAAGAGCTG +
Preference number: 1 (lower is better)
Translates to: TDGRPLLRFNLLEHA*YTSPAAYSPHNKEL
Trigger: CAGCTCTTTGTTGTGAGGGCTGTAAGCTGCAGGGCTTGTGTATCACGCATGCTCCAACAGGTTAAATCTCAGTAGTGGCCGCCCATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp CTGTGCCTGACCAACTCACCTAGGCTACCAAGTTCCCTTCTAGGCTaGTTAGAGTTGGTTATCCCCTTGACTGTCAACTCTGCAGCTGGG +
Preference number: 1 (lower is better)
Translates to: LCLTNSPRLPSSLLG*LELVIPLTVNSAAG
Trigger: CCCAGCTGCAGAGTTGACAGTCAAGGGGATAACCAACTCTAATCAGCCTAGAAGGGAACTTGGTAGCCTAGGTGAGTTGGTCAGGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp AGGCTGATTAGAGTTGGTTATCCCCTTGACTGTCAACTCTGCAGCTaGGCCAACCATACACACCCAGAGTTCCTAGTTCCTCCTGCCCTT +
Preference number: 1 (lower is better)
Translates to: RLIRVGYPLDCQLCS*ANHTHPEFLVPPAL
Trigger: AAGGGCAGGAGGAACTAGGAACTCTGGGTGTGTATGGTTGGCCCAGCTGCAGAGTTGACAGTCAAGGGGATAACCAACTCTAATCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp CCTTCTAGGCTGATTAGAGTTGGTTATCCCCTTGACTGTCAACTCTaGAGCTGGGCCAACCATACACACCCAGAGTTCCTAGTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: PSRLIRVGYPLDCQL*SWANHTHPEFLVPP
Trigger: AGGAGGAACTAGGAACTCTGGGTGTGTATGGTTGGCCCAGCTGCAGAGTTGACAGTCAAGGGGATAACCAACTCTAATCAGCCTAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp TGCTTCCTTTCTCTCTCTCTGCCATGTAAGGATGCAATGGGAAGATaGTGGCTATCAGCAAACCAGGGTAAGGGTGCTCACCAGGAACTC +
Preference number: 1 (lower is better)
Translates to: CFLSLSLPCKDAMGR*WLSANQGKGAHQEL
Trigger: GAGTTCCTGGTGAGCACCCTTACCCTGGTTTGCTGATAGCCATCATCTTCCCATTGCATCCTTACATGGCAGAGAGAGAGAAAGGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp TATGCAGGTAAAATATGGCCACATATCCACACCTTCACAGGGCTCTaGCTGACACACGGAGGACACAATCACAAGAGCCAAAGCAGGGAA +
Preference number: 1 (lower is better)
Translates to: YAGKIWPHIHTFTGL*LTHGGHNHKSQSRE
Trigger: TTCCCTGCTTTGGCTCTTGTGATTGTGTCCTCCGTGTGTCAGGCAGAGCCCTGTGAAGGTGTGGATATGTGGCCATATTTTACCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp TCATCATCCAGTGGAACTACAGCTCTTAGAGTTCTCCCCACAATCTaGGGAGTAAGAGGAGATGTTGCCACCCACTTCCTGGGCATAAAG +
Preference number: 1 (lower is better)
Translates to: SSSSGTTALRVLPTI*GVRGDVATHFLGIK
Trigger: CTTTATGCCCAGGAAGTGGGTGGCAACATCTCCTCTTACTCCCCAGATTGTGGGGAGAACTCTAAGAGCTGTAGTTCCACTGGATGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp CCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTaGATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGT +
Preference number: 1 (lower is better)
Translates to: PFPSFCLHKPAPKIL*ICSHPILQTSKKGS
Trigger: ACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
3UTR TCA 90 bp TTCCCCACAGAAAAAGAGCTCACCAGCCAGCTAAGGCCTCCAGAGTaGTTTAACTCATCATCCAGTGGAACTACAGCTCTTAGAGTTCTC +
Preference number: 1 (lower is better)
Translates to: FPTEKELTSQLRPPE*FNSSSSGTTALRVL
Trigger: GAGAACTCTAAGAGCTGTAGTTCCACTGGATGATGAGTTAAATCACTCTGGAGGCCTTAGCTGGCTGGTGAGCTCTTTTTCTGTGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp CGTGATACACAAGCCCTGCAGCTTACAGCCCTCACAACAAAGAGCTaGCTCATCAACACAACTTTCAATTGCCCCGCCCAATATTCATAT +
Preference number: 1 (lower is better)
Translates to: RDTQALQLTALTTKS*LINTTFNCPAQYSY
Trigger: ATATGAATATTGGGCGGGGCAATTGAAAGTTGTGTTGATGAGTCAGCTCTTTGTTGTGAGGGCTGTAAGCTGCAGGGCTTGTGTATCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp GCAATTTCCTGTTGGCCAGCTCTGAATACCTTATTCACTAGAGGCTaGGATGGAGTCAGTACTGCTACTACAGGAACACGAGTCAACATC +
Preference number: 1 (lower is better)
Translates to: AISCWPALNTLFTRG*DGVSTATTGTRVNI
Trigger: GATGTTGACTCGTGTTCCTGTAGTAGCAGTACTGACTCCATCTCAGCCTCTAGTGAATAAGGTATTCAGAGCTGGCCAACAGGAAATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp TCTCTGTCACATACCTGTAGCTTCCTTCCTTTCCCACAATCTTGCTaGCCCGTCACAGGTAACCAACATCCTAAACTTGGTCTTTTCACA +
Preference number: 1 (lower is better)
Translates to: SLSHTCSFLPFPQSC*PVTGNQHPKLGLFT
Trigger: TGTGAAAAGACCAAGTTTAGGATGTTGGTTACCTGTGACGGGGCAGCAAGATTGTGGGAAAGGAAGGAAGCTACAGGTATGTGACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp AACTCTCTGTCACATACCTGTAGCTTCCTTCCTTTCCCACAATCTTaGTGCCCCGTCACAGGTAACCAACATCCTAAACTTGGTCTTTTC +
Preference number: 1 (lower is better)
Translates to: NSLSHTCSFLPFPQS*CPVTGNQHPKLGLF
Trigger: GAAAAGACCAAGTTTAGGATGTTGGTTACCTGTGACGGGGCAGCAAGATTGTGGGAAAGGAAGGAAGCTACAGGTATGTGACAGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp ATGCCTATGGTGGCAAAAGGCAGCATGAGTCTCATGCTTTGCTGGTaGCATTCAAATGTCAGACAGATTTACTTACTCGAGCTCTTTGGC +
Preference number: 1 (lower is better)
Translates to: MPMVAKGSMSLMLCW*HSNVRQIYLLELFG
Trigger: GCCAAAGAGCTCGAGTAAGTAAATCTGTCTGACATTTGAATGTCACCAGCAAAGCATGAGACTCATGCTGCCTTTTGCCACCATAGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp TCTCTATTGGCATCATCAGAGGTTGTGTTTGCAGCTAGGCAACACTaGAAACTAGCAGCAGGATTTGCTTCATTAGCATCGATGTTTGGG +
Preference number: 1 (lower is better)
Translates to: SLLASSEVVFAARQH*KLAAGFASLASMFG
Trigger: CCCAAACATCGATGCTAATGAAGCAAATCCTGCTGCTAGTTTGCAGTGTTGCCTAGCTGCAAACACAACCTCTGATGATGCCAATAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp CCTACTTCTCCATACCATTCATGCCTATGGTGGCAAAAGGCAGCATaGGTCTCATGCTTTGCTGGTGACATTCAAATGTCAGACAGATTT +
Preference number: 1 (lower is better)
Translates to: PTSPYHSCLWWQKAA*VSCFAGDIQMSDRF
Trigger: AAATCTGTCTGACATTTGAATGTCACCAGCAAAGCATGAGACTCATGCTGCCTTTTGCCACCATAGGCATGAATGGTATGGAGAAGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp GCGCATGAACAGGTGATCAACTCAGAAGACGAGCTTCATAAAGGTTaGCATAGAACTTTAGAATATGCCTATGGATGGCCAAGTCACAAC +
Preference number: 1 (lower is better)
Translates to: AHEQVINSEDELHKG*HRTLEYAYGWPSHN
Trigger: GTTGTGACTTGGCCATCCATAGGCATATTCTAAAGTTCTATGGCAACCTTTATGAAGCTCGTCTTCTGAGTTGATCACCTGTTCATGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp ACCACAGGAAACATAGAAACGAGTTTGAGGAATACCACTTCAAGATaGGAATGGGAGGCAAAAATAATTCAGCCAACTAGGAGGTGGGCA +
Preference number: 1 (lower is better)
Translates to: TTGNIETSLRNTTSR*EWEAKIIQPTRRWA
Trigger: TGCCCACCTCCTAGTTGGCTGAATTATTTTTGCCTCCCATTCCCATCTTGAAGTGGTATTCCTCAAACTCGTTTCTATGTTTCCTGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp TTGGGTGGGGAGGCATCCAGTGACTGTCCTTTTCAGCTTCAACAATaGCAACACAATCTCTTGGCTTTGTATTTGTGTAAGAGTTCCTTT +
Preference number: 1 (lower is better)
Translates to: LGGEASSDCPFQLQQ*QHNLLALYLCKSSF
Trigger: AAAGGAACTCTTACACAAATACAAAGCCAAGAGATTGTGTTGCCATTGTTGAAGCTGAAAAGGACAGTCACTGGATGCCTCCCCACCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp AGACCAGTTAATTCTATTCAGAGTAAGATCAAGGAGGACCTCATATaGATGACCTTGGGACTTACTGGGGTAACTAGACCGAGAAGGATG +
Preference number: 1 (lower is better)
Translates to: RPVNSIQSKIKEDLI*MTLGLTGVTRPRRM
Trigger: CATCCTTCTCGGTCTAGTTACCCCAGTAAGTCCCAAGGTCATCCATATGAGGTCCTCCTTGATCTTACTCTGAATAGAATTAACTGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp AAGCTAAATATCCAACTTAAGAAACATGTCAGAGACCACTCATCCTaGCCAATATCACTCTCCCAACCTTCCTTGAAGTTGCAGTGGCTG +
Preference number: 1 (lower is better)
Translates to: KLNIQLKKHVRDHSS*PISLSQPSLKLQWL
Trigger: CAGCCACTGCAACTTCAAGGAAGGTTGGGAGAGTGATATTGGTCAGGATGAGTGGTCTCTGACATGTTTCTTAAGTTGGATATTTAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp ATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATaGAGCAGGTCTGAATTGGTAACTACCACATTCATGGTGATTTTT +
Preference number: 1 (lower is better)
Translates to: IILLTSTPFLVLNCQ*SRSELVTTTFMVIF
Trigger: AAAAATCACCATGAATGTGGTAGTTACCAATTCAGACCTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp GGAAACATAGAAACGAGTTTGAGGAATACCACTTCAAGATGGGAATaGGAGGCAAAAATAATTCAGCCAACTAGGAGGTGGGCAAAATGC +
Preference number: 1 (lower is better)
Translates to: GNIETSLRNTTSRWE*EAKIIQPTRRWAKC
Trigger: GCATTTTGCCCACCTCCTAGTTGGCTGAATTATTTTTGCCTCCCATTCCCATCTTGAAGTGGTATTCCTCAAACTCGTTTCTATGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp CCTAACCAAGAACTAGAATATTACTCATCAGTCACAAATCTTGTATaGTTCCCCACATTTTCTCAGCACCACCTACGTCTTAGACCTCAG +
Preference number: 1 (lower is better)
Translates to: PNQELEYYSSVTNLV*FPTFSQHHLRLRPQ
Trigger: CTGAGGTCTAAGACGTAGGTGGTGCTGAGAAAATGTGGGGAAGCATACAAGATTTGTGACTGATGAGTAATATTCTAGTTCTTGGTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp CTGGTGACATTCAAATGTCAGACAGATTTACTTACTCGAGCTCTTTaGCGGATGAAAAGTTTTGTGTCAATACCTCAGGGTTTGCTGCAA +
Preference number: 1 (lower is better)
Translates to: LVTFKCQTDLLTRAL*RMKSFVSIPQGLLQ
Trigger: TTGCAGCAAACCCTGAGGTATTGACACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAGTAAATCTGTCTGACATTTGAATGTCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp GACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGGTCTaGATTGGTAACTACCACATTCATGGTGATTTTTCACATATTTAT +
Preference number: 1 (lower is better)
Translates to: DIDPFPGIELPMQQV*IGNYHIHGDFSHIY
Trigger: ATAAATATGTGAAAAATCACCATGAATGTGGTAGTTACCAATTCAGACCTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp CAGCAGTACTCACCTCATAGATTTATTAGAAAGGTATTAGAACAATaGCAGGCACACAGCAAGCACTATATGAGTGAAGCCATTACAGAC +
Preference number: 1 (lower is better)
Translates to: QQYSPHRFIRKVLEQ*QAHSKHYMSEAITD
Trigger: GTCTGTAATGGCTTCACTCATATAGTGCTTGCTGTGTGCCTGGCATTGTTCTAATACCTTTCTAATAAATCTATGAGGTGAGTACTGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp CCAGTGACTGTCCTTTTCAGCTTCAACAATGGCAACACAATCTCTTaGCTTTGTATTTGTGTAAGAGTTCCTTTTCACGATGAGAATGTC +
Preference number: 1 (lower is better)
Translates to: PVTVLFSFNNGNTIS*LCICVRVPFHDENV
Trigger: GACATTCTCATCGTGAAAAGGAACTCTTACACAAATACAAAGCCAAGAGATTGTGTTGCCATTGTTGAAGCTGAAAAGGACAGTCACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp GGTAAATTATACAGACCCTGCTTTAGAAAGGCTCACAATTCAAGCTaGTCTAACACGATGAGTCAATGCTATGGAAAAACAGAAGAGACC +
Preference number: 1 (lower is better)
Translates to: GKLYRPCFRKAHNSS*SNTMSQCYGKTEET
Trigger: GGTCTCTTCTGTTTTTCCATAGCATTGACTCATCGTGTTAGACCAGCTTGAATTGTGAGCCTTTCTAAAGCAGGGTCTGTATAATTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp CATTCAAATGTCAGACAGATTTACTTACTCGAGCTCTTTGGCGGATaGAAAGTTTTGTGTCAATACCTCAGGGTTTGCTGCAATACTAAC +
Preference number: 1 (lower is better)
Translates to: HSNVRQIYLLELFGG*KVLCQYLRVCCNTN
Trigger: GTTAGTATTGCAGCAAACCCTGAGGTATTGACACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAGTAAATCTGTCTGACATTTGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp GACCCTGCTTTAGAAAGGCTCACAATTCAAGCTGGTCTAACACGATaGGTCAATGCTATGGAAAAACAGAAGAGACCAGTTAATTCTATT +
Preference number: 1 (lower is better)
Translates to: DPALERLTIQAGLTR*VNAMEKQKRPVNSI
Trigger: AATAGAATTAACTGGTCTCTTCTGTTTTTCCATAGCATTGACTCATCGTGTTAGACCAGCTTGAATTGTGAGCCTTTCTAAAGCAGGGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 90 bp ACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCCCATCCAATCCTaGAAACTTCCAAGAAGGGCAGTAGATAACTTTTCAAAAGAAAAA +
Preference number: 1 (lower is better)
Translates to: TSQHLRSSEFVPIQS*KLPRRAVDNFSKEK
Trigger: TTTTTCTTTTGAAAAGTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGAGGATCTTAGGTGCTGGCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
3UTR GCA 90 bp TTTCTCTGCCTACAGAGCAAATATAAGGGTAAATTATACAGACCCTaGTTTAGAAAGGCTCACAATTCAAGCTGGTCTAACACGATGAGT +
Preference number: 1 (lower is better)
Translates to: FLCLQSKYKGKLYRP*FRKAHNSSWSNTMS
Trigger: ACTCATCGTGTTAGACCAGCTTGAATTGTGAGCCTTTCTAAAGCAGGGTCTGTATAATTTACCCTTATATTTGCTCTGTAGGCAGAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp GCAGCAACAATATTCTCAGTGGTTCTACCACTCAACCCCTTGGGATaGAGGTTCTTAGTAATATTTCACTATTTAGTCTACAGCCTATAT +
Preference number: 1 (lower is better)
Translates to: AATIFSVVLPLNPLG*RFLVIFHYLVYSLY
Trigger: ATATAGGCTGTAGACTAAATAGTGAAATATTACTAAGAACCTTCATCCCAAGGGGTTGAGTGGTAGAACCACTGAGAATATTGTTGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 90 bp TTCTCAAGATTGATATGGCTATTCATGGTCTTTTGTGGTTTCATATaGACTGTAGAATTGTTTTGTCCCTGTCTTCAGATGACATCGTCT +
Preference number: 1 (lower is better)
Translates to: FSRLIWLFMVFCGFI*TVELFCPCLQMTSS
Trigger: AGACGATGTCATCTGAAGACAGGGACAAAACAATTCTACAGTCCATATGAAACCACAAAAGACCATGAATAGCCATATCAATCTTGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 90 bp CAAAGAAGCGTTGTTGATGGCCAAGGCTTATTCTTCCTACAAATATaGTTGAGTTCTGACACCTGGTATAATGTTTTCTTTAAAATGAGA +
Preference number: 1 (lower is better)
Translates to: QRSVVDGQGLFFLQI*LSSDTWYNVFFKMR
Trigger: TCTCATTTTAAAGAAAACATTATACCAGGTGTCAGAACTCAATCATATTTGTAGGAAGAATAAGCCTTGGCCATCAACAACGCTTCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTCCTCCTCATCACCAGTaGCCTACACGAGACCTCCCC +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPPPHHQ*PTRDLP
Trigger: GGGGAGGTCTCGTGTAGGGCACTGGTGATGAGGAGG...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGTGGAAAAGGTCAAGTaGAACGGAGGTGCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPVEKVK*NGGAQG
Trigger: GCCCTGGGCACCTCCGTTCCACTTGACCTTTTCCAC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTTTGAGGTTGGGAGTTTaGGACCAGCCTGGCCAACGT +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPLRLGV*DQPGQR
Trigger: ACGTTGGCCAGGCTGGTCTCAAACTCCCAACCTCAA...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp GGGACCCATCTCCCAATTTACCAGGTGGATAATGCCTGGGTCACCTaGAAGTCCAAAATTGGAGACACCATAACCACGCTGGAGACACCA +
Preference number: 2 (lower is better)
Translates to: GTHLPIYQVDNAWVT*KSKIGDTITTLETP
Trigger: TGGTGTCTCCAGCGTGGTTATGGTGTCTCCAATTTTGGACTTCAAGGTGACCCAGGCATTATCCACCTGGTAAATTGGGAGATGGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGTAGGTGTGAGCCACTaGACCCACCTACTTAGTGTT +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPVGVSH*THLLSV
Trigger: AACACTAAGTAGGTGGGTGCAGTGGCTCACACCTAC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTTTACCAAATGTGTGTTaGGGTCCTCAACTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPLPNVC*GPQLGL
Trigger: CAACCCCAGTTGAGGACCTCAACACACATTTGGTAA...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGCAGCTAGGCAACACTaGAAACTAGCAGCAGGATTT +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPAARQH*KLAAGF
Trigger: AAATCCTGCTGCTAGTTTGCAGTGTTGCCTAGCTGC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp GTGGGGATTGTAAGCTCTATGATGAAGGAGGCACCAGCCTCTCTATaGGCATCATCAGAGGTTGTGTTTGCAGCTAGGCAACACTGCAAA +
Preference number: 2 (lower is better)
Translates to: VGIVSSMMKEAPASL*ASSEVVFAARQHCK
Trigger: TTTGCAGTGTTGCCTAGCTGCAAACACAACCTCTGATGATGCCAATAGAGAGGCTGGTGCCTCCTTCATCATAGAGCTTACAATCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATAATCTAGGAGAGAGGTaGCTGGTTTGGGCTGCATCA +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDNLGER*LVWAAS
Trigger: TGATGCAGCCCAAACCAGTCACCTCTCTCCTAGATT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGTTCCCATCCAATCCTaGAAACTTCCAAGAAGGGCA +
Preference number: 2 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLVPIQS*KLPRRA
Trigger: TGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAAC...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
3UTR-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGAGTAAGAGGAGATGTTaGCACCCACTTCCTGGGCAT +
Preference number: 2 (lower is better)
Translates to: NHTADIDPFPGIELPMQQSKRRC*HPLPGH
Trigger: ATGCCCAGGAAGTGGGTGGCAACATCTCCTCTTACT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTTATTGCAGCCTGAGCTaGTTAAGACACAGAGTAACT +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPYCSLS*LRHRVT
Trigger: AGTTACTCTGTGTCTTAATCAGCTCAGGCTGCAATA...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCCTCTTCTCTCCATCTaGCAAACACCCTTGGGTCTC +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSPLLSI*QTPLGL
Trigger: GAGACCCAAGGGTGTTTGGCAGATGGAGAGAAGAGG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCATTCTCTCGCGGGTCCTaGGACTCCAGGGAACAAAGG +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPFSRGS*DSREQR
Trigger: CCTTTGTTCCCTGGAGTCCCAGGACCCGCGAGAGAA...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATGGGGAGTGCAGTATGTaGCCCAAAGGTTCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDGECSM*PKGSEK
Trigger: TTTTTCAGAACCTTTGGGCCACATACTGCACTCCCC...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp GTGGTCACACACTGCAAGCCTCTTCTCTCCATCTGCCAAACACCCTaGGGTCTCCATGTCTCCATGAAATACCAGATCTTTTTCTTTTTG +
Preference number: 2 (lower is better)
Translates to: VVTHCKPLLSICQTP*GLHVSMKYQIFFFL
Trigger: CAAAAAGAAAAAGATCTGGTATTTCATGGAGACATGGAGACCCAAGGGTGTTTGGCAGATGGAGAGAAGAGGCTTGCAGTGTGTGACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp TTTCAGTTTTGCCAGTCAGGTAGAGAGCAGCATCTCCCTGTGATTTaGACTTCACTTTCCCTGCTCGCTAGTGAAAATCGCTTCACATGC +
Preference number: 2 (lower is better)
Translates to: FQFCQSGREQHLPVI*TSLSLLASENRFTC
Trigger: GCATGTGAAGCGATTTTCACTAGCGAGCAGGGAAAGTGAAGTCAAAATCACAGGGAGATGCTGCTCTCTACCTGACTGGCAAAACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp TCACTGAGTGGGACACAATTGCCTAGTGCCCCGTTGTGTCTCTGTTaGGCTCATTTTGAAGTGATAGTCAGCAAGGCTGTGCATCATTTT +
Preference number: 2 (lower is better)
Translates to: SLSGTQLPSAPLCLC*AHFEVIVSKAVHHF
Trigger: AAAATGATGCACAGCCTTGCTGACTATCACTTCAAAATGAGCCAAACAGAGACACAACGGGGCACTAGGCAATTGTGTCCCACTCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCTGGAAGACAGACACTaGACAGGTCAAAATGCAAAC +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDLEDRH*TGQNAN
Trigger: GTTTGCATTTTGACCTGTTCAGTGTCTGTCTTCCAG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCCAATGCAGCAGGTCTaGATTGGTAACTACCACATT +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDPMQQV*IGNYHI
Trigger: AATGTGGTAGTTACCAATTCAGACCTGCTGCATTGG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGTTCCTCAGAGAGCAGTaGCTCCAATGGTCAGTGACA +
Preference number: 2 (lower is better)
Translates to: SVSQLLHETRSLVKEASKFLREQ*LQWSVT
Trigger: TGTCACTGACCATTGGAGTCACTGCTCTCTGAGGAA...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACACACTGCAGCCCTCTaGCAGTGTCACACTGGCATT +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPHTAAL*QCHTGI
Trigger: AATGCCAGTGTGACACTGTCAGAGGGCTGCAGTGTG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATTTTCCCTGGCTAATTTaGAACTGCCTGTACGAGCTT +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDFPWLI*NCLYEL
Trigger: AAGCTCGTACAGGCAGTTTCAAATTAGCCAGGGAAA...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGCTCAAAAAGGAACAATaGCACCAGTCCCTCACAATG +
Preference number: 2 (lower is better)
Translates to: NHTADIDPFPGIELPMQQLKKEQ*HQSLTM
Trigger: CATTGTGAGGGACTGGTGGCATTGTTCCTTTTTGAG...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATTCTAACAGTAAAAGCTaGATCTCTAGGCCACTGACC +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDSNSKS*ISRPLT
Trigger: GGTCAGTGGCCTAGAGATGCAGCTTTTACTGTTAGA...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGCAGACAGTACAGCCTaGAACTGTGGCGCAGGCGCA +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSADSTA*NCGAGA
Trigger: TGCGCCTGCGCCACAGTTGCAGGCTGTACTGTCTGC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp TTAGGAAAGCCATCAGATAACTGTCCGATTCTGTTCTTAGTCCTCTaGCCAAGTCTATTTTCCTCTCCCCACGCTGTTCACAAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: LGKPSDNCPILFLVL*PSLFSSPHAVHKKS
Trigger: GCTCTTCTTGTGAACAGCGTGGGGAGAGGAAAATAGACTTGGCAAGAGGACTAAGAACAGAATCGGACAGTTATCTGATGGCTTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATAACCTGGATTACTACTaGGGCAAGCAGTTTCCATTA +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDNLDYY*GKQFPL
Trigger: TAATGGAAACTGCTTGCCTCAGTAGTAATCCAGGTT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCATCCAACTTCAAAAGCTaGGCCCCCGCCTGCTTCTAT +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPSNFKS*APACFY
Trigger: ATAGAAGCAGGCGGGGGCTCAGCTTTTGAAGTTGGA...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGATCTCCTGACCTTGTaGTCCACCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSDLLTL*STCLSL
Trigger: GAGGCTGAGGCAGGTGGATCACAAGGTCAGGAGATC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTAACACAACTTTCAATTaGCCCGCCCAATATTCATAT +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPNTTFN*PAQYSY
Trigger: ATATGAATATTGGGCGGGGCAATTGAAAGTTGTGTT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCAATGGTCAGTGACATaGAGGAGGAAACGCAGGATT +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSQWSVT*RRKRRI
Trigger: AATCCTGCGTTTCCTCCTGCATGTCACTGACCATTG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGTGTTGAACACCCTGTaGTCACACACTGCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPVLNTL*SHTASL
Trigger: GAGGCTTGCAGTGTGTGACCACAGGGTGTTCAACAC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATGTAAGAGCAAATCTGTaGTCATCAACTAGGTGCACA +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDVRANL*SSTRCT
Trigger: TGTGCACCTAGTTGATGACCACAGATTTGCTCTTAC...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCTGGTCTTGAACTCCTaGCCCCAGGTAATCCACCCA +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCILVLNS*PQVIHP
Trigger: TGGGTGGATTACCTGGGGTCAGGAGTTCAAGACCAG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGTCATCCCCACGGAAATaGTGCAGTGATTTTATGCAC +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSSSPRK*CSDFMH
Trigger: GTGCATAAAATCACTGCATCATTTCCGTGGGGATGA...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCCAAAGAAGCGTTGTTaGTGGCCAAGGCTTATTCTT +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSPKKRC*WPRLIL
Trigger: AAGAATAAGCCTTGGCCATCAACAACGCTTCTTTGG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGTGATACACAAGCCCTaGAGCTTACAGCCCTCACAA +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPVIHKP*SLQPSQ
Trigger: TTGTGAGGGCTGTAAGCTGCAGGGCTTGTGTATCAC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTAAATTATACAGACCCTaGTTTAGAAAGGCTCACAAT +
Preference number: 2 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPKLYRP*FRKAHN
Trigger: ATTGTGAGCCTTTCTAAAGCAGGGTCTGTATAATTT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp GCTGGTGACATTCAAATGTCAGACAGATTTACTTACTCGAGCTCTTaGGCGGATGAAAAGTTTTGTGTCAATACCTCAGGGTTTGCTGCA +
Preference number: 2 (lower is better)
Translates to: AGDIQMSDRFTYSSS*ADEKFCVNTSGFAA
Trigger: TGCAGCAAACCCTGAGGTATTGACACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAGTAAATCTGTCTGACATTTGAATGTCACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp AATTCTATTCAGAGTAAGATCAAGGAGGACCTCATATGGATGACCTaGGGACTTACTGGGGTAACTAGACCGAGAAGGATGAGTCCATTA +
Preference number: 2 (lower is better)
Translates to: NSIQSKIKEDLIWMT*GLTGVTRPRRMSPL
Trigger: TAATGGACTCATCCTTCTCGGTCTAGTTACCCCAGTAAGTCCCAAGGTCATCCATATGAGGTCCTCCTTGATCTTACTCTGAATAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACCCCTTTCCTGGTATTaGACTGCCAATGCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSPLSWY*TANAAG
Trigger: ACCTGCTGCATTGGCAGTTCAATACCAGGAAAGGGG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACTGAAAAACTGTGTGTaGCAGTCTCCTGGCTGTGTA +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPLKNCV*QSPGCV
Trigger: TACACAGCCAGGAGACTGTCACACACAGTTTTTCAG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATAAATCAAGTCAATATTaGAAGAATACTCTAGGCGGG +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDKSSQY*KNTLGG
Trigger: CCCGCCTAGAGTATTCTTTCAATATTGACTTGATTT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTGGGGAGGCATCCAGTaGCTGTCCTTTTCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIWGGIQ*LSFSAS
Trigger: TGAAGCTGAAAAGGACAGTCACTGGATGCCTCCCCA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCATAGTCTCAATCTCCTaGCCTCATGATCCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIIVSIS*PHDPPA
Trigger: GGCAGGCGGATCATGAGGTCAGGAGATTGAGACTAT...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGTCTTCTCACAGCTCTaGAGGTGGAAGACTGATCAA +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPVFSQL*RWKTDQ
Trigger: TTGATCAGTCTTCCACCTGCAGAGCTGTGAGAAGAC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACACATATATAGGGTTTaGGACAGACTCCACACCCCT +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPHIYRV*DRLHTP
Trigger: AGGGGTGTGGAGTCTGTCCCAAACCCTATATATGTG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATAATGGGTCTAGTCAGTaGAAGAACATTTCTCTCATT +
Preference number: 2 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDNGSSQ*KNISLI
Trigger: AATGAGAGAAATGTTCTTCCACTGACTAGACCCATT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCCAACTGATCTATACTaGGACTGTCATGAAAAAGGT +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSPTDLY*DCHEKG
Trigger: ACCTTTTTCATGACAGTCTCAGTATAGATCAGTTGG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGTCTCCATGTCTCCATaGAATACCAGATCTTTTTCT +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSVSMSP*NTRSFS
Trigger: AGAAAAAGATCTGGTATTTCATGGAGACATGGAGAC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGGAGTGATGTTTTTATaGGTGAAGGTAAGCTTCATC +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSGVMFL*VKVSFI
Trigger: GATGAAGCTTACCTTCACTCATAAAAACATCACTCC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCATGGCAAAAGGCAGCATaGGTCTCATGCTTTGCTGGT +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSWQKAA*VSCFAG
Trigger: ACCAGCAAAGCATGAGACTCATGCTGCCTTTTGCCA...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCATCTCCCAACCTTCCTTaGAGTTGCAGTGGCTGTGAT +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSSPNLP*SCSGCD
Trigger: ATCACAGCCACTGCAACTTCAAGGAAGGTTGGGAGA...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGTACCTCAGGGTTTGCTaGAATACTAACAACCTAAAG +
Preference number: 2 (lower is better)
Translates to: SVSQLLHETRSLVKEASKYLRVC*NTNNLK
Trigger: CTTTAGGTTGTTAGTATTGCAGCAAACCCTGAGGTA...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAAGATGGAGTCAGTACTaGTACTACAGGAACACGAGT +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPRWSQY*YYRNTS
Trigger: ACTCGTGTTCCTGTAGTAGCAGTACTGACTCCATCT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACAAATGTTATACAACTaGAACTGTCCTCCACGTCGC +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPQMLYN*NCPPRR
Trigger: GCGACGTGGAGGACAGTTGCAGTTGTATAACATTTG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAAGCAAGAGACCAAAATaGAGGGAGTACAGGTGGAAA +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPSKRPK*REYRWK
Trigger: TTTCCACCTGTACTCCCTGCATTTTGGTCTCTTGCT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGTGTACACACCGTGCTaGAAGACAGACACTGAACAG +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIVYTPC*KTDTEQ
Trigger: CTGTTCAGTGTCTGTCTTCCAGCACGGTGTGTACAC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCTGACAGTGTCACACTaGCATTATTTTGCTGCTTAT +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSLTVSH*HYFAAY
Trigger: ATAAGCAGCAAAATAATGCCAGTGTGACACTGTCAG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp ACAGGCCTACACTTAAACCTCTGCCTCAAAGGAGAAATCAGATACTaGCCACGTTATTGCAAAGTCAAAGCTGCTACACTTAAAATATGG +
Preference number: 2 (lower is better)
Translates to: TGLHLNLCLKGEIRY*PRYCKVKAATLKIW
Trigger: CCATATTTTAAGTGTAGCAGCTTTGACTTTGCAATAACGTGGCAAGTATCTGATTTCTCCTTTGAGGCAGAGGTTTAAGTGTAGGCCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp CAGTATGCAAGGGTTCCAATTTGTCCACTTCTTCACCAATATTTGTaGTGTTTTGGTTCTTCAATGATAGCCATCCTGACAGGTGAGAGT +
Preference number: 2 (lower is better)
Translates to: QYARVPICPLLHQYL*CFGSSMIAILTGES
Trigger: ACTCTCACCTGTCAGGATGGCTATCATTGAAGAACCAAAACACAACAAATATTGGTGAAGAAGTGGACAAATTGGAACCCTTGCATACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp CAACAGTATGCAAGGGTTCCAATTTGTCCACTTCTTCACCAATATTaGTTGTGTTTTGGTTCTTCAATGATAGCCATCCTGACAGGTGAG +
Preference number: 2 (lower is better)
Translates to: QQYARVPICPLLHQY*LCFGSSMIAILTGE
Trigger: CTCACCTGTCAGGATGGCTATCATTGAAGAACCAAAACACAACAAATATTGGTGAAGAAGTGGACAAATTGGAACCCTTGCATACTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCACAGTAATTATACATaGGTGGTTGCTAGTTCCTTT +
Preference number: 2 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSHSNYT*VVASSF
Trigger: AAAGGAACTAGCAACCACTCATGTATAATTACTGTG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGTGGCCCAAAGGTTCTaGAAAACTGTGTGTGACAGT +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIVAQRF*KTVCDS
Trigger: ACTGTCACACACAGTTTTTCAGAACCTTTGGGCCAC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAAGGAAAGAGATGGTCTaGGCACAGAGAATGAATCTA +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPRKEMV*AQRMNL
Trigger: TAGATTCATTCTCTGTGCTCAGACCATCTCTTTCCT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGAAGTGTACACACCGTaGTGGAAGACAGACACTGAA +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIEVYTP*WKTDTE
Trigger: TTCAGTGTCTGTCTTCCAGCACGGTGTGTACACTTC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACCCAAGAGGCAGTTCTaGAAATGTGAGCATGTTAGG +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSPKRQF*KCEHVR
Trigger: CCTAACATGCTCACATTTCCAGAACTGCCTCTTGGG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCATGGTGCAGCCTCAGTTaGAGTGACAGGAAGTTTAGA +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSWCSLS*SDRKFR
Trigger: TCTAAACTTCCTGTCACTCCAACTGAGGCTGCACCA...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCACCAGCCTCTCTATTaGCATCATCAGAGGTTGTGT +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIHQPLY*HHQRLC
Trigger: ACACAACCTCTGATGATGCCAATAGAGAGGCTGGTG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp AGGGGATTTAATTGCTCATCTGATCTGAATGCCCATGACCAGCTCTaGTTTATCATTGGCATGGCCATGAACACAAACAATATAAAATGC +
Preference number: 2 (lower is better)
Translates to: RGFNCSSDLNAHDQL*FIIGMAMNTNNIKC
Trigger: GCATTTTATATTGTTTGTGTTCATGGCCATGCCAATGATAAACAAGAGCTGGTCATGGGCATTCAGATCAGATGAGCAATTAAATCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCATGCATATGGACCATCTaGTTCTCTTTTGCAAAATGC +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPCIWTI*FSFAKC
Trigger: GCATTTTGCAAAAGAGAATCAGATGGTCCATATGCA...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTCTCCATACCATTCATaGCTATGGTGGCAAAAGGCA +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCISPYHS*LWWQKA
Trigger: TGCCTTTTGCCACCATAGGCATGAATGGTATGGAGA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCAAGGAGGACCTCATATaGATGACCTTGGGACTTACT +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIKEDLI*MTLGLT
Trigger: AGTAAGTCCCAAGGTCATCCATATGAGGTCCTCCTT...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp TATAGAGAACCTGCATATATAAAGCTGTGTGGGTTGGATTCTTTGTaGCTTATACCTCCAATGGCCAAATACATTTTCTTTCGTCACAGG +
Preference number: 2 (lower is better)
Translates to: YREPAYIKLCGLDSL*LIPPMAKYIFFRHR
Trigger: CCTGTGACGAAAGAAAATGTATTTGGCCATTGGAGGTATAAGCAACAAAGAATCCAACCCACACAGCTTTATATATGCAGGTTCTCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp GCATATAGAGAACCTGCATATATAAAGCTGTGTGGGTTGGATTCTTaGTTGCTTATACCTCCAATGGCCAAATACATTTTCTTTCGTCAC +
Preference number: 2 (lower is better)
Translates to: AYREPAYIKLCGLDS*LLIPPMAKYIFFRH
Trigger: GTGACGAAAGAAAATGTATTTGGCCATTGGAGGTATAAGCAACAAAGAATCCAACCCACACAGCTTTATATATGCAGGTTCTCTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTGTACGAGCTTTAAATaGGTTCTTTGTGGACTTCGG +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCICTSFK*VLCGLR
Trigger: CCGAAGTCCACAAAGAACTCATTTAAAGCTCGTACA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCAATACAGTTACATTCTaGGGTACTGGGGTTAGGACT +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCINTVTF*GTGVRT
Trigger: AGTCCTAACCCCAGTACCTCAGAATGTAACTGTATT...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGGTTGGATTCTTTGTTaGTTATACCTCCAATGGCCA +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSGWILC*LYLQWP
Trigger: TGGCCATTGGAGGTATAAGCAACAAAGAATCCAACC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGTTAGCCACCACACATaGCCTTATTATTGTCACTTC +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSVSHHT*PYYCHF
Trigger: GAAGTGACAATAATAAGGCCATGTGTGGTGGCTAAC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp ACAAGAAGAGCATATAGAGAACCTGCATATATAAAGCTGTGTGGGTaGGATTCTTTGTTGCTTATACCTCCAATGGCCAAATACATTTTC +
Preference number: 2 (lower is better)
Translates to: TRRAYREPAYIKLCG*DSLLLIPPMAKYIF
Trigger: GAAAATGTATTTGGCCATTGGAGGTATAAGCAACAAAGAATCCAACCCACACAGCTTTATATATGCAGGTTCTCTATATGCTCTTCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTACTTGCCACGTTATTaGAAAGTCAAAGCTGCTACA +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIYLPRY*KVKAAT
Trigger: TGTAGCAGCTTTGACTTTGCAATAACGTGGCAAGTA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGTTGATTGTTGCCTTTaGTGTGAGAAGCTTTGTGAT +
Preference number: 2 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIVDCCL*CEKLCD
Trigger: ATCACAAAGCTTCTCACAGCAAAGGCAACAATCAAC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGTAATTATACATGAGTaGTTGCTAGTTCCTTTAACC +
Preference number: 2 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPVIIHE*LLVPLT
Trigger: GGTTAAAGGAACTAGCAACCACTCATGTATAATTAC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCATTTAGAATATGCCTATaGATGGCCAAGTCACAACCA +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSFRICL*MAKSQP
Trigger: TGGTTGTGACTTGGCCATCCATAGGCATATTCTAAA...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCATTTCAGCTTCAACAATaGCAACACAATCTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSFQLQQ*QHNLLA
Trigger: AGCCAAGAGATTGTGTTGCCATTGTTGAAGCTGAAA...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 90 bp TCTTTGTTCTTCTTTCTCAAGATTGATATGGCTATTCATGGTCTTTaGTGGTTTCATATGGACTGTAGAATTGTTTTGTCCCTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: SLFFFLKIDMAIHGL*WFHMDCRIVLSLSS
Trigger: TGAAGACAGGGACAAAACAATTCTACAGTCCATATGAAACCACAAAAGACCATGAATAGCCATATCAATCTTGAGAAAGAAGAACAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp TGGTACCCTCCCCCACCTCCGCCCAAGAGGCAGTTCTaGAAATGTGAGCATGTTAGGGGTGCCACTGATGGG +
Preference number: 3 (lower is better)
Translates to: WYPPPPPPKRQF*KCEHVRGATDG
Trigger: CCCATCAGTGGCACCCCTAACATGCTCACATTTCCAGAACTGCCTCTTGGGCGGAGGTGGGGGAGGGTACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp AGCACCACCTACGTCTTAGACCTCAGCCATTTGCCTTaGCTTAGCCCCAGCCTGTGCCTGACCAACTCACCT +
Preference number: 3 (lower is better)
Translates to: STTYVLDLSHLP*LSPSLCLTNSP
Trigger: AGGTGAGTTGGTCAGGCACAGGCTGGGGCTAAGGCAAGGCAAATGGCTGAGGTCTAAGACGTAGGTGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp AAGGAGCCCTTGCCTCCCCTGACGGCAGCAGCAGAATaGGGTCTAAGCCTTGCATTTGATGAGACTTCACTG +
Preference number: 3 (lower is better)
Translates to: KEPLPPLTAAAE*GLSLAFDETSL
Trigger: CAGTGAAGTCTCATCAAATGCAAGGCTTAGACCCCATTCTGCTGCTGCCGTCAGGGGAGGCAAGGGCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp CTCTTTCCTTTTCACTTCCTGGACCTACCAAAGCCTTaGCCTTGGGTGGGGAGGCATCCAGTGACTGTCCTT +
Preference number: 3 (lower is better)
Translates to: LFPFHFLDLPKP*PWVGRHPVTVL
Trigger: AAGGACAGTCACTGGATGCCTCCCCACCCAAGGCCAAGGCTTTGGTAGGTCCAGGAAGTGAAAAGGAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp GCGCCCGGCCTGACGCCTCTTTCTTTAGTGTGTAGCTaGTTTTCTTCTCCCCGACTTCACATGGTCTTTCCT +
Preference number: 3 (lower is better)
Translates to: APGLTPLSLVCS*FSSPRLHMVFP
Trigger: AGGAAAGACCATGTGAAGTCGGGGAGAAGAAAACCAGCTACACACTAAAGAAAGAGGCGTCAGGCCGGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTAGGCAGGAGAATCGCTaGAACCTGGAAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPRQENR*NLEGGG
Trigger: ACCTCCACCTTCCAGGTTCAAGCGATTCTCCTGCCT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTCACCCTCCTAGTGTGTaGAACACCCTGTGGTCACAC +
Preference number: 3 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPHPPSV*NTLWSH
Trigger: GTGTGACCACAGGGTGTTCAACACACTAGGAGGGTG...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp AGTTCTCCCCACAATCTGGGGAGTAAGAGGAGATGTTaGCACCCACTTCCTGGGCATAAAGCCAGCTCAAGA +
Preference number: 3 (lower is better)
Translates to: SSPHNLGSKRRC*HPLPGHKASSR
Trigger: TCTTGAGCTGGCTTTATGCCCAGGAAGTGGGTGGCAACATCTCCTCTTACTCCCCAGATTGTGGGGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp CAAGCCCTGCAGCTTACAGCCCTCACAACAAAGAGCTaGCTCATCAACACAACTTTCAATTGCCCCGCCCAA +
Preference number: 3 (lower is better)
Translates to: QALQLTALTTKS*LINTTFNCPAQ
Trigger: TTGGGCGGGGCAATTGAAAGTTGTGTTGATGAGTCAGCTCTTTGTTGTGAGGGCTGTAAGCTGCAGGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TACCAAAGCCTTGGCCTTGGGTGGGGAGGCATCCAGTaGCTGTCCTTTTCAGCTTCAACAATGGCAACACAA +
Preference number: 3 (lower is better)
Translates to: YQSLGLGWGGIQ*LSFSASTMATQ
Trigger: TTGTGTTGCCATTGTTGAAGCTGAAAAGGACAGTCACTGGATGCCTCCCCACCCAAGGCCAAGGCTTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp AGAGTTGGTTATCCCCTTGACTGTCAACTCTGCAGCTaGGCCAACCATACACACCCAGAGTTCCTAGTTCCT +
Preference number: 3 (lower is better)
Translates to: RVGYPLDCQLCS*ANHTHPEFLVP
Trigger: AGGAACTAGGAACTCTGGGTGTGTATGGTTGGCCCAGCTGCAGAGTTGACAGTCAAGGGGATAACCAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGATCTGCCAAACACCCTaGGGTCTCCATGTCTCCATG +
Preference number: 3 (lower is better)
Translates to: NHTADIDPFPGIELPMQQICQTP*GLHVSM
Trigger: CATGGAGACATGGAGACCCAAGGGTGTTTGGCAGAT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATGCCCATGACCAGCTCTaGTTTATCATTGGCATGGCC +
Preference number: 3 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDAHDQL*FIIGMA
Trigger: GGCCATGCCAATGATAAACAAGAGCTGGTCATGGGC...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TCTCTCTCTCTGCCATGTAAGGATGCAATGGGAAGATaGTGGCTATCAGCAAACCAGGGTAAGGGTGCTCAC +
Preference number: 3 (lower is better)
Translates to: SLSLPCKDAMGR*WLSANQGKGAH
Trigger: GTGAGCACCCTTACCCTGGTTTGCTGATAGCCATCATCTTCCCATTGCATCCTTACATGGCAGAGAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GAAATGTGTCTTCTCACAGCTCTGCAGGTGGAAGACTaGTCAAGGTGTCAGCAGCACTGGTTTCTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: EMCLLTALQVED*SRCQQHWFLLR
Trigger: CCTCAGAAGAAACCAGTGCTGCTGACACCTTGATCAGTCTTCCACCTGCAGAGCTGTGAGAAGACACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp TTAGCGCCCTCACAAGAAGGGAAAGGAGAGCTTGCTTaGTTCCTTTCTCTCTCTCTGCCATGTAAGGATGCA +
Preference number: 3 (lower is better)
Translates to: LAPSQEGKGELA*FLSLSLPCKDA
Trigger: TGCATCCTTACATGGCAGAGAGAGAGAAAGGAAGCAAGCAAGCTCTCCTTTCCCTTCTTGTGAGGGCGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp AAAATATGGCCACATATCCACACCTTCACAGGGCTCTaGCTGACACACGGAGGACACAATCACAAGAGCCAA +
Preference number: 3 (lower is better)
Translates to: KIWPHIHTFTGL*LTHGGHNHKSQ
Trigger: TTGGCTCTTGTGATTGTGTCCTCCGTGTGTCAGGCAGAGCCCTGTGAAGGTGTGGATATGTGGCCATATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp CTGATTAGAGTTGGTTATCCCCTTGACTGTCAACTCTaGAGCTGGGCCAACCATACACACCCAGAGTTCCTA +
Preference number: 3 (lower is better)
Translates to: LIRVGYPLDCQL*SWANHTHPEFL
Trigger: TAGGAACTCTGGGTGTGTATGGTTGGCCCAGCTGCAGAGTTGACAGTCAAGGGGATAACCAACTCTAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTATGAGCAATTTCCTGTaGGCCAGCTCTGAATACCTT +
Preference number: 3 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPMSNFL*ASSEYL
Trigger: AAGGTATTCAGAGCTGGCCAACAGGAAATTGCTCAT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTTTTTCCCTGGCTAATTaGAAACTGCCTGTACGAGCT +
Preference number: 3 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPFSLAN*KLPVRA
Trigger: AGCTCGTACAGGCAGTTTCAAATTAGCCAGGGAAAA...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp CCAGGCAGTTCAGCAAACTCAACAATTCCGGTGGTATaGGAAAGGGCATTTTGGAGTAGGAGATTTCGGCTC +
Preference number: 3 (lower is better)
Translates to: PGSSANSTIPVV*ERAFWSRRFRL
Trigger: GAGCCGAAATCTCCTACTCCAAAATGCCCTTTCTCATACCACCGGAATTGTTGAGTTTGCTGAACTGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp CATACCTGTAGCTTCCTTCCTTTCCCACAATCTTGCTaGCCCGTCACAGGTAACCAACATCCTAAACTTGGT +
Preference number: 3 (lower is better)
Translates to: HTCSFLPFPQSC*PVTGNQHPKLG
Trigger: ACCAAGTTTAGGATGTTGGTTACCTGTGACGGGGCAGCAAGATTGTGGGAAAGGAAGGAAGCTACAGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTCAACACAACTTTCAATaGCCCCGCCCAATATTCATA +
Preference number: 3 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPQHNFQ*PRPIFI
Trigger: TATGAATATTGGGCGGGGCAATTGAAAGTTGTGTTG...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGGACCTACCAAAGCCTaGGCCTTGGGTGGGGAGGCA +
Preference number: 3 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIGPTKA*ALGGEA
Trigger: TGCCTCCCCACCCAAGGCCAAGGCTTTGGTAGGTCC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAACCAAAGCCTTGGCCTaGGGTGGGGAGGCATCCAGT +
Preference number: 3 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSTKALA*GGEASS
Trigger: ACTGGATGCCTCCCCACCCAAGGCCAAGGCTTTGGT...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GAAAAAGAGCTCACCAGCCAGCTAAGGCCTCCAGAGTaGTTTAACTCATCATCCAGTGGAACTACAGCTCTT +
Preference number: 3 (lower is better)
Translates to: EKELTSQLRPPE*FNSSSSGTTAL
Trigger: AAGAGCTGTAGTTCCACTGGATGATGAGTTAAATCACTCTGGAGGCCTTAGCTGGCTGGTGAGCTCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp CTGAGGTATGTTGTAAATGGGCAGCGCATGAACAGGTaGTCAACTCAGAAGACGAGCTTCATAAAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: LRYVVNGQRMNR*STQKTSFIKVA
Trigger: GGCAACCTTTATGAAGCTCGTCTTCTGAGTTGATCACCTGTTCATGCGCTGCCCATTTACAACATACCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TGTTGGCCAGCTCTGAATACCTTATTCACTAGAGGCTaGGATGGAGTCAGTACTGCTACTACAGGAACACGA +
Preference number: 3 (lower is better)
Translates to: CWPALNTLFTRG*DGVSTATTGTR
Trigger: TCGTGTTCCTGTAGTAGCAGTACTGACTCCATCTCAGCCTCTAGTGAATAAGGTATTCAGAGCTGGCCAACA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp ACCAACTCACCTAGGCTACCAAGTTCCCTTCTAGGCTaGTTAGAGTTGGTTATCCCCTTGACTGTCAACTCT +
Preference number: 3 (lower is better)
Translates to: TNSPRLPSSLLG*LELVIPLTVNS
Trigger: AGAGTTGACAGTCAAGGGGATAACCAACTCTAATCAGCCTAGAAGGGAACTTGGTAGCCTAGGTGAGTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp CTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATaGAGCAGGTCTGAATTGGTAACTACCACATTCATG +
Preference number: 3 (lower is better)
Translates to: LTSTPFLVLNCQ*SRSELVTTTFM
Trigger: CATGAATGTGGTAGTTACCAATTCAGACCTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp GCATCATCAGAGGTTGTGTTTGCAGCTAGGCAACACTaGAAACTAGCAGCAGGATTTGCTTCATTAGCATCG +
Preference number: 3 (lower is better)
Translates to: ASSEVVFAARQH*KLAAGFASLAS
Trigger: CGATGCTAATGAAGCAAATCCTGCTGCTAGTTTGCAGTGTTGCCTAGCTGCAAACACAACCTCTGATGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp TCACATACCTGTAGCTTCCTTCCTTTCCCACAATCTTaGTGCCCCGTCACAGGTAACCAACATCCTAAACTT +
Preference number: 3 (lower is better)
Translates to: SHTCSFLPFPQS*CPVTGNQHPKL
Trigger: AAGTTTAGGATGTTGGTTACCTGTGACGGGGCAGCAAGATTGTGGGAAAGGAAGGAAGCTACAGGTATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp AAACAACAGAAATGTGTCTTCTCACAGCTCTGCAGGTaGAAGACTGATCAAGGTGTCAGCAGCACTGGTTTC +
Preference number: 3 (lower is better)
Translates to: KQQKCVFSQLCR*KTDQGVSSTGF
Trigger: GAAACCAGTGCTGCTGACACCTTGATCAGTCTTCCACCTGCAGAGCTGTGAGAAGACACATTTCTGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTaGATTTGTTCCCATCCAATCCTGCAAACTTCCAAG +
Preference number: 3 (lower is better)
Translates to: SFCLHKPAPKIL*ICSHPILQTSK
Trigger: CTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
3UTR TCA 72 bp GCACCAATCTGGTTGGCCACTGCCTATAATGAAGACTaGCTGCCGAATATTCACTTAAAGGATGGCTGTTCA +
Preference number: 3 (lower is better)
Translates to: APIWLATAYNED*LPNIHLKDGCS
Trigger: TGAACAGCCATCCTTTAAGTGAATATTCGGCAGTCAGTCTTCATTATAGGCAGTGGCCAACCAGATTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp AATACTGCCCTGCTGGCAACAGCCACGATAGTCACTTaGTCATCTGAAAATGCCTTGCACTTTCTTTTTCAC +
Preference number: 3 (lower is better)
Translates to: NTALLATATIVT*SSENALHFLFH
Trigger: GTGAAAAAGAAAGTGCAAGGCATTTTCAGATGAGCAAGTGACTATCGTGGCTGTTGCCAGCAGGGCAGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGATTACCAAATGTGTGTaGAGGTCCTCAACTGGGGTT +
Preference number: 3 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSITKCV*RSSTGV
Trigger: AACCCCAGTTGAGGACCTCAACACACATTTGGTAAT...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCATCTGTCCTCAGGGCATaGCAACCCATTAGGCTGAAT +
Preference number: 3 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPSVLRA*QPIRLN
Trigger: ATTCAGCCTAATGGGTTGCAATGCCCTGAGGACAGA...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGGTGCCCAGCTGGTCTaGAACTTCTGGTCTCAAGCA +
Preference number: 3 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIGAQLV*NFWSQA
Trigger: TGCTTGAGACCAGAAGTTCAAGACCAGCTGGGCACC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GTCAGACAGATTTACTTACTCGAGCTCTTTGGCGGATaGAAAGTTTTGTGTCAATACCTCAGGGTTTGCTGC +
Preference number: 3 (lower is better)
Translates to: VRQIYLLELFGG*KVLCQYLRVCC
Trigger: GCAGCAAACCCTGAGGTATTGACACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAGTAAATCTGTCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GTGGCAAAAGGCAGCATGAGTCTCATGCTTTGCTGGTaGCATTCAAATGTCAGACAGATTTACTTACTCGAG +
Preference number: 3 (lower is better)
Translates to: VAKGSMSLMLCW*HSNVRQIYLLE
Trigger: CTCGAGTAAGTAAATCTGTCTGACATTTGAATGTCACCAGCAAAGCATGAGACTCATGCTGCCTTTTGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp ATGGCCTTATTATTGTCACTTCTAGGCCAGGTTGGTTaGGTATTCACTTTCCTGGGACCCATCTCCCAATTT +
Preference number: 3 (lower is better)
Translates to: MALLLSLLGQVG*VFTFLGPISQF
Trigger: AAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACCTGGCCTAGAAGTGACAATAATAAGGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GCCTCCCATTTCCTCTCATTGATGAGAATTTGCCCATaGGAGGTTAATATCCCTATACTCTCGCAATGTGTC +
Preference number: 3 (lower is better)
Translates to: ASHFLSLMRICP*EVNIPILSQCV
Trigger: GACACATTGCGAGAGTATAGGGATATTAACCTCTCATGGGCAAATTCTCATCAATGAGAGGAAATGGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp CTCTGCCTAGGAAGATACCTCAGAAAATTCCCCTCGTaGAATTTCACTTTGCATATGCTTCTCCTGTTCTTC +
Preference number: 3 (lower is better)
Translates to: LCLGRYLRKFPS*NFTLHMLLLFF
Trigger: GAAGAACAGGAGAAGCATATGCAAAGTGAAATTGCACGAGGGGAATTTTCTGAGGTATCTTCCTAGGCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp AATGTGTCAACTAGCTTCTTTCATTGCTGTTCAAGATaGCAGAGCCCATGCTATTCAGATCCTTGGCCCATT +
Preference number: 3 (lower is better)
Translates to: NVSTSFFHCCSR*QSPCYSDPWPI
Trigger: AATGGGCCAAGGATCTGAATAGCATGGGCTCTGGCATCTTGAACAGCAATGAAAGAAGCTAGTTGACACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp AATTCTATTCAGAGTAAGATCAAGGAGGACCTCATATaGATGACCTTGGGACTTACTGGGGTAACTAGACCG +
Preference number: 3 (lower is better)
Translates to: NSIQSKIKEDLI*MTLGLTGVTRP
Trigger: CGGTCTAGTTACCCCAGTAAGTCCCAAGGTCATCCATATGAGGTCCTCCTTGATCTTACTCTGAATAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATAAACTGTGTACAATTTaGAAGAAGTGTACACACCGT +
Preference number: 3 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDKLCTI*KKCTHR
Trigger: ACGGTGTGTACACTTCTTCAAAATTGTACACAGTTT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGACTTACTCGAGCTCTTaGGCGGATGAAAAGTTTTGT +
Preference number: 3 (lower is better)
Translates to: SVSQLLHETRSLVKEASKTYSSS*ADEKFC
Trigger: ACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAGT...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGGGTTGGATTCTTTGTaGCTTATACCTCCAATGGCC +
Preference number: 3 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPGLDSL*LIPPMA
Trigger: GGCCATTGGAGGTATAAGCAACAAAGAATCCAACCC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAAATGCCTGGGTCACCTaGAAGTCCAAAATTGGAGAC +
Preference number: 3 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPNAWVT*KSKIGD
Trigger: GTCTCCAATTTTGGACTTCAAGGTGACCCAGGCATT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGCACCAGCCTCTCTATaGGCATCATCAGAGGTTGTG +
Preference number: 3 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIAPASL*ASSEVV
Trigger: CACAACCTCTGATGATGCCAATAGAGAGGCTGGTGC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp ACCAGCCTGACTGAATTCAGTCACAGTAATTATACATaGGTGGTTGCTAGTTCCTTTAACCACACCAGAAGC +
Preference number: 3 (lower is better)
Translates to: TSLTEFSHSNYT*VVASSFNHTRS
Trigger: GCTTCTGGTGTGGTTAAAGGAACTAGCAACCACTCATGTATAATTACTGTGACTGAATTCAGTCAGGCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp CCCTTTCCTGGTATTGAACTGCCAATGCAGCAGGTCTaGATTGGTAACTACCACATTCATGGTGATTTTTCA +
Preference number: 3 (lower is better)
Translates to: PFPGIELPMQQV*IGNYHIHGDFS
Trigger: TGAAAAATCACCATGAATGTGGTAGTTACCAATTCAGACCTGCTGCATTGGCAGTTCAATACCAGGAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp AGCTTCTTTCATTGCTGTTCAAGATGCCAGAGCCCATaGTATTCAGATCCTTGGCCCATTTGTAAAAATTGG +
Preference number: 3 (lower is better)
Translates to: SFFHCCSRCQSP*YSDPWPICKNW
Trigger: CCAATTTTTACAAATGGGCCAAGGATCTGAATAGCATGGGCTCTGGCATCTTGAACAGCAATGAAAGAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp CTATACTCTCGCAATGTGTCAACTAGCTTCTTTCATTaGTGTTCAAGATGCCAGAGCCCATGCTATTCAGAT +
Preference number: 3 (lower is better)
Translates to: LYSRNVSTSFFH*CSRCQSPCYSD
Trigger: ATCTGAATAGCATGGGCTCTGGCATCTTGAACAGCAATGAAAGAAGCTAGTTGACACATTGCGAGAGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp GACTATAGGATAAAGGCACCATTAAAGGTGCTTCAGTaGCATTCTTTCATTGAGGAGAAATCTGCAGAAGGG +
Preference number: 3 (lower is better)
Translates to: DYRIKAPLKVLQ*HSFIEEKSAEG
Trigger: CCCTTCTGCAGATTTCTCCTCAATGAAAGAATGCCACTGAAGCACCTTTAATGGTGCCTTTATCCTATAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp AATAGTTTCATCCTTGACACCAGCTCTGTAGAGATTTaGGCTAATGCAACTCTCTGTCACATACCTGTAGCT +
Preference number: 3 (lower is better)
Translates to: NSFILDTSSVEI*ANATLCHIPVA
Trigger: AGCTACAGGTATGTGACAGAGAGTTGCATTAGCCCAAATCTCTACAGAGCTGGTGTCAAGGATGAAACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp CAGAGGATAAATTTCTTCTTCCCTTCCTCTCGTCTCTaGACTATACCTTACAGCTTTCCAGAGAAGTTTCAC +
Preference number: 3 (lower is better)
Translates to: QRINFFFPSSRL*TIPYSFPEKFH
Trigger: GTGAAACTTCTCTGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTATCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACATGAAACAAGGAGCTaGGTAAAGGAGGCCAGCAAG +
Preference number: 3 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSHETRS*VKEASK
Trigger: CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GTGTTTTGGTTCTTCAATGATAGCCATCCTGACAGGTaGGAGTTGATATCTCACGGTGGTTTTGATTTGCAT +
Preference number: 3 (lower is better)
Translates to: VFWFFNDSHPDR*ELISHGGFDLH
Trigger: ATGCAAATCAAAACCACCGTGAGATATCAACTCTCACCTGTCAGGATGGCTATCATTGAAGAACCAAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp CAAACTGTGTACAATTTTGAAGAAGTGTACACACCGTaGTGGAAGACAGACACTGAACAGGTCAAAATGCAA +
Preference number: 3 (lower is better)
Translates to: QTVYNFEEVYTP*WKTDTEQVKMQ
Trigger: TTGCATTTTGACCTGTTCAGTGTCTGTCTTCCAGCACGGTGTGTACACTTCTTCAAAATTGTACACAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp ACTGTGTACAATTTTGAAGAAGTGTACACACCGTGCTaGAAGACAGACACTGAACAGGTCAAAATGCAAACT +
Preference number: 3 (lower is better)
Translates to: TVYNFEEVYTPC*KTDTEQVKMQT
Trigger: AGTTTGCATTTTGACCTGTTCAGTGTCTGTCTTCCAGCACGGTGTGTACACTTCTTCAAAATTGTACACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp TACAGACCCTGCTTTAGAAAGGCTCACAATTCAAGCTaGTCTAACACGATGAGTCAATGCTATGGAAAAACA +
Preference number: 3 (lower is better)
Translates to: YRPCFRKAHNSS*SNTMSQCYGKT
Trigger: TGTTTTTCCATAGCATTGACTCATCGTGTTAGACCAGCTTGAATTGTGAGCCTTTCTAAAGCAGGGTCTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAAAGGGAAAGGAGAGCTaGCTTGCTTCCTTTCTCTCT +
Preference number: 3 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSKGKES*LASFLS
Trigger: AGAGAGAAAGGAAGCAAGCAAGCTCTCCTTTCCCTT...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGCAGAGTGCTATGGATaGCATGTTTATGTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSAECYG*HVYVLP
Trigger: TGGGAGGACATAAACATGCAATCCATAGCACTCTGC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGATGCTCCGATTCCCTTaGTTTTCATATACGATTTCA +
Preference number: 3 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSMLRFP*FSYTIS
Trigger: TGAAATCGTATATGAAAACAAAGGGAATCGGAGCAT...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCATGGCAACACAATCTCTaGGCTTTGTATTTGTGTAAG +
Preference number: 3 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPWQHNL*ALYLCK
Trigger: CTTACACAAATACAAAGCCAAGAGATTGTGTTGCCA...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTTTTGCCAACAGACATaGGGCTGTGTTCTACAAAGG +
Preference number: 3 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIFCQQT*GCVLQR
Trigger: CCTTTGTAGAACACAGCCCAATGTCTGTTGGCAAAA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GGATTGCATGTTTATGTCCTCCCAAAATTCATCTGTTaGAACCCTAATCTCCAAAGCAATGGTATTAGGAGG +
Preference number: 3 (lower is better)
Translates to: GLHVYVLPKFIC*NPNLQSNGIRR
Trigger: CCTCCTAATACCATTGCTTTGGAGATTAGGGTTTCAACAGATGAATTTTGGGAGGACATAAACATGCAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TTAGAAAGGCTCACAATTCAAGCTGGTCTAACACGATaGGTCAATGCTATGGAAAAACAGAAGAGACCAGTT +
Preference number: 3 (lower is better)
Translates to: LERLTIQAGLTR*VNAMEKQKRPV
Trigger: AACTGGTCTCTTCTGTTTTTCCATAGCATTGACTCATCGTGTTAGACCAGCTTGAATTGTGAGCCTTTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp GAACTAGAATATTACTCATCAGTCACAAATCTTGTATaGTTCCCCACATTTTCTCAGCACCACCTACGTCTT +
Preference number: 3 (lower is better)
Translates to: ELEYYSSVTNLV*FPTFSQHHLRL
Trigger: AAGACGTAGGTGGTGCTGAGAAAATGTGGGGAAGCATACAAGATTTGTGACTGATGAGTAATATTCTAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp TTCAAATGTCAGACAGATTTACTTACTCGAGCTCTTTaGCGGATGAAAAGTTTTGTGTCAATACCTCAGGGT +
Preference number: 3 (lower is better)
Translates to: FKCQTDLLTRAL*RMKSFVSIPQG
Trigger: ACCCTGAGGTATTGACACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAGTAAATCTGTCTGACATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR-3UTR CAA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCCATTTTGTGTCACTTaGTGTCTTCTTTTGCTTCCC +
Preference number: 3 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIPFCVT*CLLLLP
Trigger: GGGAAGCAAAAGAAGACACAAAGTGACACAAAATGG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GTGAACACACGTCCACAATTAAACCTGGATTACTACTaGGGCAAGCAGTTTCCATTAATTTCTAAGAAATCC +
Preference number: 3 (lower is better)
Translates to: VNTRPQLNLDYY*GKQFPLISKKS
Trigger: GGATTTCTTAGAAATTAATGGAAACTGCTTGCCTCAGTAGTAATCCAGGTTTAATTGTGGACGTGTGTTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp ATATTCTCAGTGGTTCTACCACTCAACCCCTTGGGATaGAGGTTCTTAGTAATATTTCACTATTTAGTCTAC +
Preference number: 3 (lower is better)
Translates to: IFSVVLPLNPLG*RFLVIFHYLVY
Trigger: GTAGACTAAATAGTGAAATATTACTAAGAACCTTCATCCCAAGGGGTTGAGTGGTAGAACCACTGAGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TCTTTCATCAACAAAGTAGAACATCACAGACTCAGATaGGCCCTATGTAGCAATATGCAAAGGACATTACTT +
Preference number: 3 (lower is better)
Translates to: SFINKVEHHRLR*ALCSNMQRTLL
Trigger: AAGTAATGTCCTTTGCATATTGCTACATAGGGCTCATCTGAGTCTGTGATGTTCTACTTTGTTGATGAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TGCACATGGATATCTGATTTTCTCAATACCATGTGTTaGAGAGACTATCCTTTCCCCATTATGTATTCTTGG +
Preference number: 3 (lower is better)
Translates to: CTWISDFLNTMC*RDYPFPIMYSW
Trigger: CCAAGAATACATAATGGGGAAAGGATAGTCTCTTCAACACATGGTATTGAGAAAATCAGATATCCATGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp AACATCACAGACTCAGATGAGCCCTATGTAGCAATATaGAAAGGACATTACTTGAAAACTCAACTTTCTTGT +
Preference number: 3 (lower is better)
Translates to: NITDSDEPYVAI*KGHYLKTQLSC
Trigger: ACAAGAAAGTTGAGTTTTCAAGTAATGTCCTTTGCATATTGCTACATAGGGCTCATCTGAGTCTGTGATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp TTATCTAGTTCATGGTCCATGATAACCACAGATTGCTaGATTTGTAGCCACATGAGTCATTCAAAAGTGATA +
Preference number: 3 (lower is better)
Translates to: LSSSWSMITTDC*ICSHMSHSKVI
Trigger: TATCACTTTTGAATGACTCATGTGGCTACAAATGCAGCAATCTGTGGTTATCATGGACCATGAACTAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp TTGATATGGCTATTCATGGTCTTTTGTGGTTTCATATaGACTGTAGAATTGTTTTGTCCCTGTCTTCAGATG +
Preference number: 3 (lower is better)
Translates to: LIWLFMVFCGFI*TVELFCPCLQM
Trigger: CATCTGAAGACAGGGACAAAACAATTCTACAGTCCATATGAAACCACAAAAGACCATGAATAGCCATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp GTTGTTGATGGCCAAGGCTTATTCTTCCTACAAATATaGTTGAGTTCTGACACCTGGTATAATGTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: VVDGQGLFFLQI*LSSDTWYNVFF
Trigger: AAAGAAAACATTATACCAGGTGTCAGAACTCAATCATATTTGTAGGAAGAATAAGCCTTGGCCATCAACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TCTTTAAAGACCGAATCTCCAAATACAGTTACATTCTaGGGTACTGGGGTTAGGACTTCAATATGTGAATTT +
Preference number: 3 (lower is better)
Translates to: SLKTESPNTVTF*GTGVRTSICEF
Trigger: AAATTCACATATTGAAGTCCTAACCCCAGTACCTCAGAATGTAACTGTATTTGGAGATTCGGTCTTTAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp TTGTTCAGTGTACACTGCAGTATTGTTGACTATAGGTaGAATATTGTACCACAAATCTCTAGAGCTTATTCA +
Preference number: 3 (lower is better)
Translates to: LFSVHCSIVDYR*NIVPQISRAYS
Trigger: TGAATAAGCTCTAGAGATTTGTGGTACAATATTGCACCTATAGTCAACAATACTGCAGTGTACACTGAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR GCA 72 bp GGTGAGATCTATCTTAACAAATTGTTCAGTGTACACTaGAGTATTGTTGACTATAGGTGCAATATTGTACCA +
Preference number: 3 (lower is better)
Translates to: GEIYLNKLFSVH*SIVDYRCNIVP
Trigger: TGGTACAATATTGCACCTATAGTCAACAATACTGCAGTGTACACTGAACAATTTGTTAAGATAGATCTCACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CCA 72 bp TGCCTCTATCTTTGTTCTTCTTTCTCAAGATTGATATaGCTATTCATGGTCTTTTGTGGTTTCATATGGACT +
Preference number: 3 (lower is better)
Translates to: CLYLCSSFSRLI*LFMVFCGFIWT
Trigger: AGTCCATATGAAACCACAAAAGACCATGAATAGCCATATCAATCTTGAGAAAGAAGAACAAAGATAGAGGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp TGTGATGCCTCTATCTTTGTTCTTCTTTCTCAAGATTaGTATGGCTATTCATGGTCTTTTGTGGTTTCATAT +
Preference number: 3 (lower is better)
Translates to: CDASIFVLLSQD*YGYSWSFVVSY
Trigger: ATATGAAACCACAAAAGACCATGAATAGCCATATCAATCTTGAGAAAGAAGAACAAAGATAGAGGCATCACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR TCA 72 bp CATTATGTATTCTTGGCACCATTGTTGAAGATCAGTTaGCAATATACATGTGAATCTATTTCTGGACTCTCT +
Preference number: 3 (lower is better)
Translates to: HYVFLAPLLKIS*QYTCESISGLS
Trigger: AGAGAGTCCAGAAATAGATTCACATGTATATTGTCAACTGATCTTCAACAATGGTGCCAAGAATACATAATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCCGAGCGACGGCAGCTaGAGGCACGCCGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKPSDGS*RHAGLR
Trigger: TCGCAGCCCGGCGTGCCTGCAGCTGCCGTCGCTCGG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTACCCGGGCACAGCTGCTaGTCCCGAGCGACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLPGHSC*SRATAA
Trigger: AGCTGCCGTCGCTCGGGAGCAGCAGCTGTGCCCGGG...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGCCGCGGCTGCTCCCCTaGGCCCGAGCGACTCCGTCA +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQPRLLP*ARATPS
Trigger: TGACGGAGTCGCTCGGGCGCAGGGGAGCAGCCGCGG...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGGCCAGGCAGGTGGCCTaGGCAGGGTCCCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKARQVA*AGSLSV
Trigger: CACTGAGAGGGACCCTGCTCAGGCCACCTGCCTGGC...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTGCACCCCGGACCAGATaGCGCTCGGTCGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPAPRTR*RSVVGL
Trigger: CAGACCCACGACCGAGCGGCATCTGGTCCGGGGTGC...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGAGCCCTTGCCTCCCCTaGCGGCAGCAGCAGAATGGG +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKSPCLP*RQQQNG
Trigger: CCCATTCTGCTGCTGCCGTCAGGGGAGGCAAGGGCT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGCACCCCGGACCAGATaGCGCTCGGTCGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSAPRTR*RSVVGL
Trigger: CAGACCCACGACCGAGCGGCATCTGGTCCGGGGTGC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGCCGGTCTTCTCGCCTaGTGGCTCTCCGGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFAGLLA*WLSGVP
Trigger: GGGGACCCCGGAGAGCCAGCAGGCGAGAAGACCGGC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGCGACCCCAGACCCCTaGCCTCGGCTCGGCACGGGA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVATPDP*PRLGTG
Trigger: TCCCGTGCCGAGCCGAGGCCAGGGGTCTGGGGTCGC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTAACCTCCCGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPNLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGTT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGCATCTCTAGGCCACTaGCCACACTGCAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPASLGH*PHCSPL
Trigger: CAGAGGGCTGCAGTGTGGTCAGTGGCCTAGAGATGC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTGCTCGGTCGTGGGTCTaGAGAACCGGTATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPARSWV*RTGMGE
Trigger: CTCCCCCATACCGGTTCTCCAGACCCACGACCGAGC...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
3UTR CAA 72 bp TTTCTCAGCACCACCTACGTCTTAGACCTCAGCCATTaGCCTTGCCTTAGCCCCAGCCTGTGCCTGACCAAC +
Preference number: 4 (lower is better)
Translates to: FLSTTYVLDLSH*PCLSPSLCLTN
Trigger: GTTGGTCAGGCACAGGCTGGGGCTAAGGCAAGGCAAATGGCTGAGGTCTAAGACGTAGGTGGTGCTGAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGCCAGGCAGGTGGCCTaGGCAGGGTCCCTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVARQVA*AGSLSV
Trigger: CACTGAGAGGGACCCTGCTCAGGCCACCTGCCTGGC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCCTTGGCGGCGCCGATaGGCTCCACCACCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVPWRRR*APPPRS
Trigger: TGACCTCGGTGGTGGAGCTCATCGGCGCCGCCAAGG...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGAGGCAGGCGGATCATaGGGTCAAGAGACAGAGACC +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPEAGGS*GQETET
Trigger: GGTCTCTGTCTCTTGACCTCATGATCCGCCTGCCTC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCCTCCTCATCACCAGTaGCCTACACGAGACCTCCCC +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKPPHHQ*PTRDLP
Trigger: GGGGAGGTCTCGTGTAGGGCACTGGTGATGAGGAGG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTGTGCTTTCAGGGGACTaGGTTGTCGCGGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPVLSGD*VVAGGG
Trigger: ACCTCCACCCGCGACAACCCAGTCCCCTGAAAGCAC...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGGCTCGGTCGTGGGTCTaGAGAACCGGTATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQARSWV*RTGMGE
Trigger: CTCCCCCATACCGGTTCTCCAGACCCACGACCGAGC...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTCGCCTCTCGCTGGGCTaGAGAGTCGCAGATAAAGTG +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPRLSLG*RVADKV
Trigger: CACTTTATCTGCGACTCTCCAGCCCAGCGAGAGGCG...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGGTGTCCAATCCGTGTaGCCCCCAGCTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFGVQSV*PPAPPG
Trigger: ACCTGGAGGAGCTGGGGGTCACACGGATTGGACACC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGGCAGGAGAATTGCCTaGACCTGGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSGRRIA*TWEAEA
Trigger: AGCCTCTGCCTCCCAGGTTCAGGCAATTCTCCTGCC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTTCACAGGGCTCTGCCTaGCACACGGAGGACACAATC +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPSQGSA*HTEDTI
Trigger: GATTGTGTCCTCCGTGTGTCAGGCAGAGCCCTGTGA...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGACTCATTGGGGGCCTTaGGGGAGGTGTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKTHWGP*GRCCHR
Trigger: ACGATGGCAACACCTCCCGCAAGGCCCCCAATGAGT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACGATCCCGGGCACAGCTaGTGCTCCCGAGCGACGGCA +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNDPGHS*CSRATA
Trigger: TGCCGTCGCTCGGGAGCAGCAGCTGTGCCCGGGATC...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTATCCCATCAGCAGGCATaGACAAAGGCCGTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLSHQQA*TKAVAC
Trigger: GCAAGCCACGGCCTTTGTCCATGCCTGCTGATGGGA...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTCCCTTCCTCCTGGAATaGAATCGTGGCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPPFLLE*NRGAAV
Trigger: CACAGCAGCGCCACGATTCCATTCCAGGAGGAAGGG...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGGTCAGGAACTCATTaGGGGCCTTGCGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLRSGTH*GPCGRC
Trigger: ACACCTCCCGCAAGGCCCCCAATGAGTTCCTGACCT...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
3UTR CAA 72 bp CAGGGTAAGGGTGCTCACCAGGAACTCACCTTGATCTaGGACTTCCCAGCCTCCAGAACGGTGAGAAATTTC +
Preference number: 4 (lower is better)
Translates to: QGKGAHQELTLI*DFPASRTVRNF
Trigger: GAAATTTCTCACCGTTCTGGAGGCTGGGAAGTCCAAGATCAAGGTGAGTTCCTGGTGAGCACCCTTACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCAGGGTCCCTCTCAGTaGGTCAACAGTTTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSQGPSQ*VNSLRR
Trigger: GCGCCTCAAACTGTTGACTCACTGAGAGGGACCCTG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGGTGTCCAATCCGTGTaGCCCCCAGCTCCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSGVQSV*PPAPPG
Trigger: ACCTGGAGGAGCTGGGGGTCACACGGATTGGACACC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTACCCTCCTAGTGTGTTaGACACCCTGTGGTCACACA +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPTLLVC*TPCGHT
Trigger: TGTGTGACCACAGGGTGTTCAACACACTAGGAGGGT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCACACTGCAGCCCTCTaGCAGTGTCACACTGGCATT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKHTAAL*QCHTGI
Trigger: AATGCCAGTGTGACACTGTCAGAGGGCTGCAGTGTG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTCCTTGCGGGAGGTGTTaGCATCGTAAGCGGGACTTT +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPPCGRC*HRKRDF
Trigger: AAAGTCCCGCTTACGATGGCAACACCTCCCGCAAGG...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCGTGCGCGCTCGGGTTaGAAAGTTTCAGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSRARSG*KVSAPV
Trigger: AACCGGAGCTGAAACTTTGCAACCCGAGCGCGCACG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGCGACTCCGTCAAGACTaGATGGCCGCGGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKRLRQD*MAAVSQ
Trigger: CTGGCTGACCGCGGCCATGCAGTCTTGACGGAGTCG...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTCTGGGAGGTGGAGGTTaGAGTGAGCCGAGATGGAGC +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFLGGGG*SEPRWS
Trigger: GCTCCATCTCGGCTCACTGCAACCTCCACCTCCCAG...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTAGATGCCAGAGCCCATaGTATTCAGATCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPRCQSP*YSDPWP
Trigger: GGGCCAAGGATCTGAATAGCATGGGCTCTGGCATCT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGCCCTTCCTCCTGGAATaGAATCGTGGCGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQPFLLE*NRGAAV
Trigger: CACAGCAGCGCCACGATTCCATTCCAGGAGGAAGGG...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCAGGTCAGGAACTCATTaGGGGCCTTGCGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSRSGTH*GPCGRC
Trigger: ACACCTCCCGCAAGGCCCCCAATGAGTTCCTGACCT...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTCGCTTCGCCTCTCGCTaGGCTGGAGAGTCGCAGATA +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFRFASR*AGESQI
Trigger: TATCTGCGACTCTCCAGCCCAGCGAGAGGCGAAGCG...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGAGTCCACCACTTGTTTaGGGCTCCACTTGGTCACGG +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKSPPLV*GSTWSR
Trigger: CCGTGACCAAGTGGAGCCCCAAACAAGTGGTGGACT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGACCTACCAAAGCCTTaGCCTTGGGTGGGGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSDLPKP*PWVGRH
Trigger: ATGCCTCCCCACCCAAGGCCAAGGCTTTGGTAGGTC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGGTGGAAAAGGTCAAGTaGAACGGAGGTGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQVEKVK*NGGAQG
Trigger: GCCCTGGGCACCTCCGTTCCACTTGACCTTTTCCAC...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGAATCGCTCGAACCTaGGAGGTGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPRIART*EVEVAV
Trigger: CACTGCAACCTCCACCTCCCAGGTTCGAGCGATTCT...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGACTCCCCTCAGCCCCTaGCCACCATCATTTCACTCT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKTPLSP*PPSFHS
Trigger: AGAGTGAAATGATGGTGGCCAGGGGCTGAGGGGAGT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTTGTCGCGGGTGGAGGTaGGGTCTGTACAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVCRGWR*GLYKRW
Trigger: CCACCTCTTGTACAGACCTCACCTCCACCCGCGACA...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCATCACTTCTCCCTTCTaGCCCTCTGGACTGCACCGT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSITSPF*PSGLHR
Trigger: ACGGTGCAGTCCAGAGGGGCAGAAGGGAGAAGTGAT...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS-3UTR GCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTACTCATTGGGGGCCTTaGGGGAGGTGTTGCCATCGT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFTHWGP*GRCCHR
Trigger: ACGATGGCAACACCTCCCGCAAGGCCCCCAATGAGT...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGCAGACAGTACAGCCTaGAACTGTGGCGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPADSTA*NCGAGA
Trigger: TGCGCCTGCGCCACAGTTGCAGGCTGTACTGTCTGC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATGCTGGAGTGCAGTGGTaGAATCTGGGCTTACTGCAG +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDAGVQW*NLGLLQ
Trigger: CTGCAGTAAGCCCAGATTGCACCACTGCACTCCAGC...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGGACGCGTGCTCCCCCTaGAAGGAGAGAAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQDACSP*KERRKK
Trigger: CTTTTTCCTTCTCTCCTTGCAGGGGGAGCACGCGTC...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGTGCTTTCAGGGGACTaGGTTGTCGCGGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSVLSGD*VVAGGG
Trigger: ACCTCCACCCGCGACAACCCAGTCCCCTGAAAGCAC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCGTCTCCGGCTTTCCTaGTCCAAGAAGGAATTCGGG +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSRLRLS*SKKEFG
Trigger: CCCGAATTCCTTCTTGGACCAGGAAAGCCGGAGACG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTACATGACCTCGAGGTCTaGCAAAAGGGTCCACAATCC +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLHDLEV*QKGPQS
Trigger: GGATTGTGGACCCTTTTGCCAGACCTCGAGGTCATG...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGATGCCGCTCGGTCGTaGGTCTGGAGAACCGGTATG +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVDAARS*VWRTGM
Trigger: CATACCGGTTCTCCAGACCCACGACCGAGCGGCATC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTATCCCTTCTGCCCCTCTaGACTGCACCGTGTTTATTC +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLSLLPL*TAPCLF
Trigger: GAATAAACACGGTGCAGTCCAGAGGGGCAGAAGGGA...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS-3UTR CCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTACAACCCTATCTGGTCTaGCCAACTCCTCCTGATCCT +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLQPYLV*PTPPDP
Trigger: AGGATCAGGAGGAGTTGGCCAGACCAGATAGGGTTG...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGAGTACCCAGGCAACTaGTCCGAGTCTGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFEYPGN*SESAMV
Trigger: CACCATTGCAGACTCGGATCAGTTGCCTGGGTACTC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTGAATCCGCTCGTTACTaGAATACCGGCAAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPESARY*NTGKGH
Trigger: ATGCCCTTTGCCGGTATTTCAGTAACGAGCGGATTC...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGCTGCTGTGGAGATCTaGGTTGATGTAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSAAVEI*VDVAPA
Trigger: AGCAGGTGCTACATCAACTCAGATCTCCACAGCAGC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCCCCTTTCCTGGTATTaGACTGCCAATGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDPLSWY*TANAAG
Trigger: ACCTGCTGCATTGGCAGTTCAATACCAGGAAAGGGG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTGGGGAGGCATCCAGTaGCTGTCCTTTTCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSWGGIQ*LSFSAS
Trigger: TGAAGCTGAAAAGGACAGTCACTGGATGCCTCCCCA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATAGGACCTCATATGGATaGCCTTGGGACTTACTGGGG +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDRTSYG*PWDLLG
Trigger: CCCCAGTAAGTCCCAAGGTCATCCATATGAGGTCCT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGAAATCTGCAGCAGCTaGTCGCCGTTGATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLEICSS*SPLIFS
Trigger: AGAGAAGATCAACGGCGAGCAGCTGCTGCAGATTTC...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGAGGCCATAATTCAGTaGACAGAGAAGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLEAIIQ*TEKVHS
Trigger: GCTGTGGACCTTCTCTGTGCACTGAATTATGGCCTC...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACCCTCTCCCTCCAGCTaGCACAGTCCAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPPSPSS*HSPAAA
Trigger: AGCTGCAGCTGGACTGTGGCAGCTGGAGGGAGAGGG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGGAGTCGCAGATAAAGTaGTGCTGCCTGCGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKESQIK*CCLRSG
Trigger: ACCGGAGCGCAGGCAGCAGCACTTTATCTGCGACTC...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGTGATACACAAGCCCTaGAGCTTACAGCCCTCACAA +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLVIHKP*SLQPSQ
Trigger: TTGTGAGGGCTGTAAGCTGCAGGGCTTGTGTATCAC...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGAGACTACAGGCGCCTaGCACCACAACTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSETTGA*HHNWLI
Trigger: AATTAGCCAGTTGTGGTGGCAGGCGCCTGTAGTCTC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTCTTGACTGTCAACTCTaGAGCTGGGCCAACCATACA +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPLDCQL*SWANHT
Trigger: TGTATGGTTGGCCCAGCTGCAGAGTTGACAGTCAAG...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTCAGCCATTTGCCTTaGCTTAGCCCCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPLSHLP*LSPSLC
Trigger: GCACAGGCTGGGGCTAAGGCAAGGCAAATGGCTGAG...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCATCCCATCAGCAGGCATaGACAAAGGCCGTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPSHQQA*TKAVAC
Trigger: GCAAGCCACGGCCTTTGTCCATGCCTGCTGATGGGA...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTTCTGGAGAACCGGTATaGGGGAGAGGAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFSGEPV*GRGALF
Trigger: GAAGAGAGCTCCTCTCCCCCATACCGGTTCTCCAGA...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTCCAACACAAGCTCCTaGTGTCCAATCCGTGTGACC +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSSNTSS*CPIRVT
Trigger: GGTCACACGGATTGGACACCAGGAGCTTGTGTTGGA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCATTCTCTCGCGGGTCCTaGGACTCCAGGGAACAAAGG +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPFSRGS*DSREQR
Trigger: CCTTTGTTCCCTGGAGTCCCAGGACCCGCGAGAGAA...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGAGGTATGTTGTAAATaGGCAGCGCATGAACAGGTG +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPEVCCK*AAHEQV
Trigger: CACCTGTTCATGCGCTGCCCATTTACAACATACCTC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCAGCCAACTAGGAGGTaGGCAAAATGCTCCGATTCC +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDQPTRR*AKCSDS
Trigger: GGAATCGGAGCATTTTGCCCACCTCCTAGTTGGCTG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGAGCCAAGTGTCTGAGTaGTCTGGGTGTCACATCTGT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKSQVSE*SGCHIC
Trigger: ACAGATGTGACACCCAGACCACTCAGACACTTGGCT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACCATGTTGGCCAGTCTaGTCTCGAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPPCWPV*SRTPDL
Trigger: GAGGTCAGGGGTTCGAGACCAGACTGGCCAACATGG...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTATTAGCATCGATGTTTaGGGAACAAGGAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPISIDV*GTRSPC
Trigger: GCAAGGGCTCCTTGTTCCCCAAACATCGATGCTAAT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTACTAGAGACCCTCTGCTaGGGATGCCTTGAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLLETLC*GCLEKK
Trigger: CTTTTTCTCAAGGCATCCCCAGCAGAGGGTCTCTAG...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp TGCCAGTCAGGTAGAGAGCAGCATCTCCCTGTGATTTaGACTTCACTTTCCCTGCTCGCTAGTGAAAATCGC +
Preference number: 4 (lower is better)
Translates to: CQSGREQHLPVI*TSLSLLASENR
Trigger: GCGATTTTCACTAGCGAGCAGGGAAAGTGAAGTCAAAATCACAGGGAGATGCTGCTCTCTACCTGACTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp GGGACACAATTGCCTAGTGCCCCGTTGTGTCTCTGTTaGGCTCATTTTGAAGTGATAGTCAGCAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GTQLPSAPLCLC*AHFEVIVSKAV
Trigger: CACAGCCTTGCTGACTATCACTTCAAAATGAGCCAAACAGAGACACAACGGGGCACTAGGCAATTGTGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGGAATTCGGGGACTCTaGACCCTTAGGACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPGIRGL*TLRTRQ
Trigger: TTGCCTGGTCCTAAGGGTTCAGAGTCCCCGAATTCC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGGAATTCGGGGACTCTaGACCCTTAGGACCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSGIRGL*TLRTRQ
Trigger: TTGCCTGGTCCTAAGGGTTCAGAGTCCCCGAATTCC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGGAGTACCCAGGCAACTaGTCCGAGTCTGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKEYPGN*SESAMV
Trigger: CACCATTGCAGACTCGGATCAGTTGCCTGGGTACTC...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTGTGGAGATCTGAGTTaGTGTAGCACCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSCGDLS*CSTCFL
Trigger: GAGGAAGCAGGTGCTACATCAACTCAGATCTCCACA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCAGGGTCCCTCTCAGTaGGTCAACAGTTTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNQGPSQ*VNSLRR
Trigger: GCGCCTCAAACTGTTGACTCACTGAGAGGGACCCTG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGAATAGGGGTAGGTGTTaGGTTGTGTCTGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKNRGRC*VVSGRV
Trigger: AACTCTCCCAGACACAACTCAACACCTACCCCTATT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCTAGGCCAGGTTGGTTaGGTATTCACTTTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDLGQVG*VFTFLG
Trigger: TCCCAGGAAAGTGAATACTCAACCAACCTGGCCTAG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCAGGCAATGGTTGTTTaGACTTACTGGACCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKQAMVV*TYWTLH
Trigger: ATGGAGGGTCCAGTAAGTGCAAACAACCATTGCCTG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCCTTGCGGGAGGTGTTaGCATCGTAAGCGGGACTTT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVPCGRC*HRKRDF
Trigger: AAAGTCCCGCTTACGATGGCAACACCTCCCGCAAGG...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGCCGAGCGCAGAGCGTaGGCGCTCGGGTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIAERRA*ALGLQS
Trigger: ACTTTGCAACCCGAGCGCGCACGCTCTGCGCTCGGC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACAGATAAAGTGCTGCTaGCTGCGCTCCGGTGCCCCT +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPQIKCC*LRSGAP
Trigger: AGGGGCACCGGAGCGCAGGCAGCAGCACTTTATCTG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCATCGCAGATAAAGTGCTaGTGCCTGCGCTCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPSQIKC*CLRSGA
Trigger: GGCACCGGAGCGCAGGCAGCAGCACTTTATCTGCGA...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGGAGATTTCGGCTCTaGCTAGGAAGATACCTCAGA +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPRRFRL*LGRYLR
Trigger: TCTGAGGTATCTTCCTAGGCAGAGCCGAAATCTCCT...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTTCTCCATACCATTCATaGCTATGGTGGCAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPSPYHS*LWWQKA
Trigger: TGCCTTTTGCCACCATAGGCATGAATGGTATGGAGA...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGTCCAAGGAAGTAGCTTaGAGTAGTCTCATCCCCACG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQSKEVA*SSLIPT
Trigger: CGTGGGGATGAGACTACTGCAAGCTACTTCCTTGGA...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTTCCTTTCTCTCTCTCTaGCATGTAAGGATGCAATGG +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPSFLSL*HVRMQW
Trigger: CCATTGCATCCTTACATGGCAGAGAGAGAGAAAGGA...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTTCTAACAGTAAAAGCTaGATCTCTAGGCCACTGACC +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPSNSKS*ISRPLT
Trigger: GGTCAGTGGCCTAGAGATGCAGCTTTTACTGTTAGA...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGGCAGCTAGGCAACACTaGAAACTAGCAGCAGGATTT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKAARQH*KLAAGF
Trigger: AAATCCTGCTGCTAGTTTGCAGTGTTGCCTAGCTGC...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCGTCTCCGGCTTTCCTaGTCCAAGAAGGAATTCGGG +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSRLRLS*SKKEFG
Trigger: CCCGAATTCCTTCTTGGACCAGGAAAGCCGGAGACG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCCTGGAATGGAATCGTaGCGCTGCTGTGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVPGMES*RCCGDL
Trigger: CAGATCTCCACAGCAGCGCCACGATTCCATTCCAGG...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCCTGGAATGGAATCGTaGCGCTGCTGTGGAGATCTG +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSPGMES*RCCGDL
Trigger: CAGATCTCCACAGCAGCGCCACGATTCCATTCCAGG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCATTGGTCCCTTCCTCCTaGAATGGAATCGTGGCGCTG +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPLVPSS*NGIVAL
Trigger: CAGCGCCACGATTCCATTCCAGGAGGAAGGGACCAA...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTACAAAGCAATCCTTCTaGACTGTAGTGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPTKQSF*TVVVRS
Trigger: GGACCTGACCACTACAGTCCAGAAGGATTGCTTTGT...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTGTTGAACACCCTGTaGTCACACACTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFVLNTL*SHTASL
Trigger: GAGGCTTGCAGTGTGTGACCACAGGGTGTTCAACAC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACCAAAGCCTTGGCCTTaGGTGGGGAGGCATCCAGTG +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPPKPWP*VGRHPV
Trigger: CACTGGATGCCTCCCCACCCAAGGCCAAGGCTTTGG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCACCAGCCTCTCTATTaGCATCATCAGAGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKHQPLY*HHQRLC
Trigger: ACACAACCTCTGATGATGCCAATAGAGAGGCTGGTG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp CAGAGTAAGATCAAGGAGGACCTCATATGGATGACCTaGGGACTTACTGGGGTAACTAGACCGAGAAGGATG +
Preference number: 4 (lower is better)
Translates to: QSKIKEDLIWMT*GLTGVTRPRRM
Trigger: CATCCTTCTCGGTCTAGTTACCCCAGTAAGTCCCAAGGTCATCCATATGAGGTCCTCCTTGATCTTACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp CTCCCAATTTACCAGGTGGATAATGCCTGGGTCACCTaGAAGTCCAAAATTGGAGACACCATAACCACGCTG +
Preference number: 4 (lower is better)
Translates to: LPIYQVDNAWVT*KSKIGDTITTL
Trigger: CAGCGTGGTTATGGTGTCTCCAATTTTGGACTTCAAGGTGACCCAGGCATTATCCACCTGGTAAATTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp GTAAGCTCTATGATGAAGGAGGCACCAGCCTCTCTATaGGCATCATCAGAGGTTGTGTTTGCAGCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: VSSMMKEAPASL*ASSEVVFAARQ
Trigger: TTGCCTAGCTGCAAACACAACCTCTGATGATGCCAATAGAGAGGCTGGTGCCTCCTTCATCATAGAGCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTCATCATAGGTTGATTTaGTGTACATGCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPHHRLI*CTCPGL
Trigger: AAGGCCTGGGCATGTACATCAAATCAACCTATGATG...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCTTCTCCTTCTTCAGTaGGGTATCCATAGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKLLLLQ*GIHSAF
Trigger: GAAAGCACTATGGATACCTCACTGAAGAAGGAGAAG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAGGAGCTCTCTTCAATaGTCGGAGGAATCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVRSSLQ*SEESAR
Trigger: ACGAGCGGATTCCTCCGATCATTGAAGAGAGCTCCT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTTGTGGAGATCTGAGTTaGTGTAGCACCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFCGDLS*CSTCFL
Trigger: GAGGAAGCAGGTGCTACATCAACTCAGATCTCCACA...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGCTGCTGTGGAGATCTaGGTTGATGTAGCACCTGCT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVAAVEI*VDVAPA
Trigger: AGCAGGTGCTACATCAACTCAGATCTCCACAGCAGC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCGAGGACTTCGTAGCTaGGGAGCCAGATTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDRGLRS*GARFLF
Trigger: AAAAAGAAATCTGGCTCCTCAGCTACGAAGTCCTCG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGCACCTAAGATCCTCTaGATTTGTTCCCATCCAATC +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLAPKIL*ICSHPI
Trigger: GATTGGATGGGAACAAATTCAGAGGATCTTAGGTGC...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGCTTCTCCTCCTTTTTaGGGCCTTCTCTGGACACCA +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPASPPF*GLLWTP
Trigger: TGGTGTCCAGAGAAGGCCTCAAAAAGGAGGAGAAGC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGCAGCTGCTCGCCGTTaGTCTTCTCTCGTTCAAACT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVAAARR*SSLVQT
Trigger: AGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGCAGCTGCTCGCCGTTaGTCTTCTCTCGTTCAAACT +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPAAARR*SSLVQT
Trigger: AGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGAGCTCTTTGGCGGATaGAAAGTTTTGTGTCAATAC +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPELFGG*KVLCQY
Trigger: GTATTGACACAAAACTTTTCATCCGCCAAAGAGCTC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGACTCCAATGGTCAGTaGCATGCAGGAGGAAACGCA +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSDSNGQ*HAGGNA
Trigger: TGCGTTTCCTCCTGCATGTCACTGACCATTGGAGTC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAAGTCCAGTGGGTGTGTaGGATGCATGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPSPVGV*DACTGQ
Trigger: CTGCCCTGTGCATGCATCTCACACACCCACTGGACT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGCTGGTCTAACACGATaGGTCAATGCTATGGAAAAA +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPAGLTR*VNAMEK
Trigger: TTTTTCCATAGCATTGACTCATCGTGTTAGACCAGC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCCAAAGAAGCGTTGTTaGTGGCCAAGGCTTATTCTT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKPKKRC*WPRLIL
Trigger: AAGAATAAGCCTTGGCCATCAACAACGCTTCTTTGG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCATCACAGACTCAGATaGGCCCTATGTAGCAATATG +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKHHRLR*ALCSNM
Trigger: CATATTGCTACATAGGGCTCATCTGAGTCTGTGATG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTAGCTCCACAAGAGCCTaGCTTCTTTTCTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFSSTRA*LLFWET
Trigger: GGTTTCCCAGAAAAGAAGTCAGGCTCTTGTGGAGCT...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATTCCTGGCCAACATGGTaGAACCCCGTCACTATTAAA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDSWPTW*NPVTIK
Trigger: TTTAATAGTGACGGGGTTTCACCATGTTGGCCAGGA...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGATAGTCTCAATCTCCTaGCCTCATGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSIVSIS*PHDPPA
Trigger: GGCAGGCGGATCATGAGGTCAGGAGATTGAGACTAT...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGAGTTCCCTTCTAGGCTaGTTAGAGTTGGTTATCCCC +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQSSLLG*LELVIP
Trigger: GGGGATAACCAACTCTAATCAGCCTAGAAGGGAACT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGTCCCTGTCTTCAGATaGCATCGTCTCATATATAGA +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPVPVFR*HRLIYR
Trigger: TCTATATATGAGACGATGTCATCTGAAGACAGGGAC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCTCCATAAACAAAACTaGCATTCTCATCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDLHKQN*HSHPGE
Trigger: CTCCCCGGGATGAGAATGGCAGTTTTGTTTATGGAG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTACAACTGATCCGAGTCTaGAATGGTGAATCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLQLIRV*NGESSS
Trigger: AGACGAAGATTCACCATTGCAGACTCGGATCAGTTG...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGACAAAGGCCGTGGCTTaGCATAAGATGGTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKTKAVA*HKMVFS
Trigger: AGAAAACACCATCTTATGGCAAGCCACGGCCTTTGT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGTTCCCATCCAATCCTaGAAACTTCCAAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSVPIQS*KLPRRA
Trigger: TGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAAC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAAAGGAGAGCTTGCTTaGTTCCTTTCTCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLKGELA*FLSLSL
Trigger: CAGAGAGAGAGAAAGGAAGCAAGCAAGCTCTCCTTT...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCTCCTCTTATCCTGGTaGAGCCTCAGTTGGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSLLLSW*SLSWSD
Trigger: GTCACTCCAACTGAGGCTGCACCAGGATAAGAGGAG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGGAGGTGGGCAAAATaGTCCGATTCCCTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPRRWAK*SDSLCF
Trigger: AAAACAAAGGGAATCGGAGCATTTTGCCCACCTCCT...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTACCCCAGTCCAGTGGTaGGGATCAATAAATCGAGAC +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFTPVQW*GSINRD
Trigger: GTCTCGATTTATTGATCCGCACCACTGGACTGGGGT...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGGTGGACTTCGGAAAGTaGTTACATTCTCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKVDFGK*LHSQQF
Trigger: GAACTGCTGAGAATGTAAGCACTTTCCGAAGTCCAC...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTACAAATGTTATACAACTaGAACTGTCCTCCACGTCGC +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLQMLYN*NCPPRR
Trigger: GCGACGTGGAGGACAGTTGCAGTTGTATAACATTTG...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGTCATCCAGACTGGAGTaGAGTGGTGTAAACCTGGTT +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQSSRLE*SGVNLV
Trigger: AACCAGGTTTACACCACTGCACTCCAGTCTGGATGA...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTAGGTGTGAGCCACTaGACCCACCTACTTAGTGTT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFVGVSH*THLLSV
Trigger: AACACTAAGTAGGTGGGTGCAGTGGCTCACACCTAC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGTCTTCTCACAGCTCTaGAGGTGGAAGACTGATCAA +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSVFSQL*RWKTDQ
Trigger: TTGATCAGTCTTCCACCTGCAGAGCTGTGAGAAGAC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTCTTAGGACCAGGCAATaGTTGTTTGCACTTACTGGA +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPLRTRQ*LFALTG
Trigger: TCCAGTAAGTGCAAACAACCATTGCCTGGTCCTAAG...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTCATGGACAAAGGCCGTaGCTTGCCATAAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFHGQRP*LAIRWC
Trigger: ACACCATCTTATGGCAAGCCACGGCCTTTGTCCATG...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACATGACCTCGAGGTCTaGCAAAAGGGTCCACAATCC +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPHDLEV*QKGPQS
Trigger: GGATTGTGGACCCTTTTGCCAGACCTCGAGGTCATG...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACTCTGGAGAACCGGTATaGGGGAGAGGAGCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNSGEPV*GRGALF
Trigger: GAAGAGAGCTCCTCTCCCCCATACCGGTTCTCCAGA...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGCCAGATTTCTTTTTaGTCCCTTCCTCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPSQISF*SLPPGM
Trigger: CATTCCAGGAGGAAGGGACCAAAAAGAAATCTGGCT...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGGTTCTCCCCACAATCTaGGGAGTAAGAGGAGATGTT +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQVLPTI*GVRGDV
Trigger: AACATCTCCTCTTACTCCCCAGATTGTGGGGAGAAC...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGTAATCCCAACACTTTaGGAGGCTGAGGTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVVIPTL*EAEVSG
Trigger: TCCGCTCACCTCAGCCTCCCAAAGTGTTGGGATTAC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCCCACCCCAGTCCAGTaGTGCGGATCAATAAATCGA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVPTPVQ*CGSINR
Trigger: TCGATTTATTGATCCGCACCACTGGACTGGGGTGGG...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGCAGTGCAGGATGTGTaGGGGAGCAGAATTTCCACT +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPAVQDV*GSRIST
Trigger: AGTGGAAATTCTGCTCCCCCACACATCCTGCACTGC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTACGGCAGCAGCAGAATaGGGTCTAAGCCTTGCATTT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFTAAAE*GLSLAF
Trigger: AAATGCAAGGCTTAGACCCCATTCTGCTGCTGCCGT...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGGCTGTCAATTTCATCTaGGGCACTAAACAGATGGCT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKAVNFI*GTKQMA
Trigger: AGCCATCTGTTTAGTGCCCCAGATGAAATTGACAGC...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGTTTGCCAACAGACATTaGGCTGTGTTCTACAAAGGC +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKFANRH*AVFYKG
Trigger: GCCTTTGTAGAACACAGCCCAATGTCTGTTGGCAAA...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGCACCTTTTATCCTCTaGGAGCCTCCCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFAPFIL*EPPISS
Trigger: AGAGGAAATGGGAGGCTCCCAGAGGATAAAAGGTGC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGCATCATAGGTTGATTTaGTGTACATGCCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQHHRLI*CTCPGL
Trigger: AAGGCCTGGGCATGTACATCAAATCAACCTATGATG...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCTTCTCCTTCTTCAGTaGGGTATCCATAGTGCTTTC +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSLLLLQ*GIHSAF
Trigger: GAAAGCACTATGGATACCTCACTGAAGAAGGAGAAG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCCGAGTCTGCAATGGTaGATCTTCGTCTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNPSLQW*IFVSGF
Trigger: AAAGCCGGAGACGAAGATTCACCATTGCAGACTCGG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGAATCCGCTCGTTACTaGAATACCGGCAAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSESARY*NTGKGH
Trigger: ATGCCCTTTGCCGGTATTTCAGTAACGAGCGGATTC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTCTGAAAAACTGTGTGTaGCAGTCTCCTGGCTGTGTA +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFLKNCV*QSPGCV
Trigger: TACACAGCCAGGAGACTGTCACACACAGTTTTTCAG...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTCTCAACCCCTTGGGATaGAGGTTCTTAGTAATATTT +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPLNPLG*RFLVIF
Trigger: AAATATTACTAAGAACCTTCATCCCAAGGGGTTGAG...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAATAGGCTTGGCATCTTaGACAGCAACAAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLIGLAS*TATKEG
Trigger: ACCTTCTTTTGTTGCTGTTCAAGATGCCAAGCCTAT...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAAACTTCCTCCAGACATaGACACTGGCTCATCACAGG +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPNFLQT*TLAHHR
Trigger: CCTGTGATGAGCCAGTGTGCATGTCTGGAGGAAGTT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAACTTCCTCCAGACATaGACACTGGCTCATCACAGG +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVNFLQT*TLAHHR
Trigger: CCTGTGATGAGCCAGTGTGCATGTCTGGAGGAAGTT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGAAATCTGCAGCAGCTaGTCGCCGTTGATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPEICSS*SPLIFS
Trigger: AGAGAAGATCAACGGCGAGCAGCTGCTGCAGATTTC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGAGGCCATAATTCAGTaGACAGAGAAGGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVEAIIQ*TEKVHS
Trigger: GCTGTGGACCTTCTCTGTGCACTGAATTATGGCCTC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAGTAAGAGGAGATGTTaGCACCCACTTCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVSKRRC*HPLPGH
Trigger: ATGCCCAGGAAGTGGGTGGCAACATCTCCTCTTACT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCTGGGAGGCAGAGGCTaGAGTGAGTTGAGATTGTAC +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNLGGRG*SELRLY
Trigger: GTACAATCTCAACTCACTGCAGCCTCTGCCTCCCAG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCATCTATGGAAGGGGAGTaGAGTATGTGGCCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPSMEGE*SMWPKG
Trigger: ACCTTTGGGCCACATACTGCACTCCCCTTCCATAGA...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCCGCCTGCTTCTATCTaGTTGATGCAAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSPPASI*LMQIPK
Trigger: TTTGGGAATTTGCATCAAGCAGATAGAAGCAGGCGG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGTGGTCATCAACTAGGTaGACAGTCCAGTGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSWSSTR*TVQWVC
Trigger: ACACACCCACTGGACTGTGCACCTAGTTGATGACCA...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCAGCAAGAGACCAAAATaGAGGGAGTACAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSSKRPK*REYRWK
Trigger: TTTCCACCTGTACTCCCTGCATTTTGGTCTCTTGCT...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGAGGGTCTCACTATGGTaGCCAGCTGGTCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKRVSLW*PAGLEL
Trigger: AAGTTCAAGACCAGCTGGGCACCATAGTGAGACCCT...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTATTGATGAGACTTCACTaGCCTAAGTCATGGGTCATT +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLLMRLH*PKSWVI
Trigger: AATGACCCATGACTTAGGGCAGTGAAGTCTCATCAA...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTACTAGCAGCAGGATTTaGTTCATTAGCATCGATGTT +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPTSSRI*FISIDV
Trigger: AACATCGATGCTAATGAAGCAAATCCTGCTGCTAGT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGATGCCGCTCGGTCGTaGGTCTGGAGAACCGGTATG +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIDAARS*VWRTGM
Trigger: CATACCGGTTCTCCAGACCCACGACCGAGCGGCATC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGTGTACACACCGTGCTaGAAGACAGACACTGAACAG +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVVYTPC*KTDTEQ
Trigger: CTGTTCAGTGTCTGTCTTCCAGCACGGTGTGTACAC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTCCGTCAAGACTGCATaGCCGCGGTCAGCCAGTCGT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCISVKTA*PRSASR
Trigger: ACGACTGGCTGACCGCGGCCATGCAGTCTTGACGGA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATAGAAAGATGAAGCTGTaGAGGGTGACTGCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDRKMKL*RVTASR
Trigger: TCTACTTGCAGTCACCCTCCACAGCTTCATCTTTCT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTGTGTTGAGTTGTGTCTaGGAGAGTTTTAACAATCAC +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPVLSCV*ESFNNH
Trigger: GTGATTGTTAAAACTCTCCCAGACACAACTCAACAC...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACTCCCTCCTCTTATCCTaGTGCAGCCTCAGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNSLLLS*CSLSWS
Trigger: ACTCCAACTGAGGCTGCACCAGGATAAGAGGAGGGA...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGAAGGAGGACCTCATATaGATGACCTTGGGACTTACT +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQKEDLI*MTLGLT
Trigger: AGTAAGTCCCAAGGTCATCCATATGAGGTCCTCCTT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCAACAATATTCTCAGTaGTTCTACCACTCAACCCCT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKQQYSQ*FYHSTP
Trigger: AGGGGTTGAGTGGTAGAACCACTGAGAATATTGTTG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGTCCTCCTGCCCTTTATaGACTCTGACAAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSSSCPL*TLTKGH
Trigger: GTGGCCTTTTGTCAGAGTCCATAAAGGGCAGGAGGA...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp CCATCAGATAACTGTCCGATTCTGTTCTTAGTCCTCTaGCCAAGTCTATTTTCCTCTCCCCACGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: PSDNCPILFLVL*PSLFSSPHAVH
Trigger: GTGAACAGCGTGGGGAGAGGAAAATAGACTTGGCAAGAGGACTAAGAACAGAATCGGACAGTTATCTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGTTAATGTTTGGTAAGTaGACTTCCTCCAGACATGCA +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKLMFGK*TSSRHA
Trigger: TGCATGTCTGGAGGAAGTTCACTTACCAAACATTAA...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCGAGGACTTCGTAGCTaGGGAGCCAGATTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVRGLRS*GARFLF
Trigger: AAAAAGAAATCTGGCTCCTCAGCTACGAAGTCCTCG...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTTTGTTCTTCGTGACTaGGAAATCAGTGATCCCTGT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSFVLRD*EISDPC
Trigger: ACAGGGATCACTGATTTCTCAGTCACGAAGAACAAA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTATACCTGATGCTAGTTaGAAATTAGTGACCATGAGG +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPIPDAS*KLVTMR
Trigger: CCTCATGGTCACTAATTTTCAACTAGCATCAGGTAT...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACTGGCAAAAGGCAGCATaGGTCTCATGCTTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNWQKAA*VSCFAG
Trigger: ACCAGCAAAGCATGAGACTCATGCTGCCTTTTGCCA...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGTTACCAAATGTGTGTTaGGGTCCTCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSLPNVC*GPQLGL
Trigger: CAACCCCAGTTGAGGACCTCAACACACATTTGGTAA...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTTTATTCACTAGAGGCTaGGATGGAGTCAGTACTGCT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFLFTRG*DGVSTA
Trigger: AGCAGTACTGACTCCATCTCAGCCTCTAGTGAATAA...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCTAGACCGAGAAGGATaGGTCCATTATCAGGATTTA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDLDREG*VHYQDL
Trigger: TAAATCCTGATAATGGACTCATCCTTCTCGGTCTAG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTATGCCTGGGTCACCTTaGAGTCCAAAATTGGAGACA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVMPGSP*SPKLET
Trigger: TGTCTCCAATTTTGGACTTCAAGGTGACCCAGGCAT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTAAGTTGCAGTGGCTGTaGTTGTCATTTCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPKLQWL*LSFLFF
Trigger: AAAGAAAAGAAATGACAATCACAGCCACTGCAACTT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAAGAGACCACTCATCCTaGCCAATATCACTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPRDHSS*PISLSQ
Trigger: TTGGGAGAGTGATATTGGTCAGGATGAGTGGTCTCT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCGCTCGTTTTTGTGTTaGTTTGTCATTCTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDRSFLC*FVILLP
Trigger: TGGCAAGAGAATGACAAATCAACACAAAAACGAGCG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATAATACAGTTACATTCTaGGGTACTGGGGTTAGGACT +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDNTVTF*GTGVRT
Trigger: AGTCCTAACCCCAGTACCTCAGAATGTAACTGTATT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGAAGTGTACACACCGTaGTGGAAGACAGACACTGAA +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSEVYTP*WKTDTE
Trigger: TTCAGTGTCTGTCTTCCAGCACGGTGTGTACACTTC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGAAGCCAGAGCCAGGCTaGTTTCATTTTAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSKPEPG*FHFNPS
Trigger: GCTGGGATTAAAATGAAAGCAGCCTGGCTCTGGCTT...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTTACCTCAGGGTTTGCTaGAATACTAACAACCTAAAG +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPYLRVC*NTNNLK
Trigger: CTTTAGGTTGTTAGTATTGCAGCAAACCCTGAGGTA...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTTCCCATCAACAGTATaGAAGGGTTCCAATTTGTCC +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSFPSTV*KGSNLS
Trigger: GGACAAATTGGAACCCTTGCATACTGTTGATGGGAA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGTATAAAGATCCAGGATaGCTGACTTCTCCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKYKDPG*LTSPSS
Trigger: TGAAGAAGGAGAAGTCAGCCATCCTGGATCTTTATA...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACTTGTGGGCAGAATGTTaGTTTCCACCGAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNLWAEC*FPPSTQ
Trigger: CTGGGTACTCGGTGGAAACCAACATTCTGCCCACAA...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCATGGACAAAGGCCGTaGCTTGCCATAAGATGGTGT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNHGQRP*LAIRWC
Trigger: ACACCATCTTATGGCAAGCCACGGCCTTTGTCCATG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTCTCGTTCAAACTTGTaGACATATTGTTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSSRSNL*TYCCRQ
Trigger: CTGCCTGCAACAATATGTCCACAAGTTTGAACGAGA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAACAAAGCAATCCTTCTaGACTGTAGTGGTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPTKQSF*TVVVRS
Trigger: GGACCTGACCACTACAGTCCAGAAGGATTGCTTTGT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGCTTACTCGAGCTCTTTaGCGGATGAAAAGTTTTGTG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQLTRAL*RMKSFV
Trigger: CACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAG...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATGAATATGCCTATGGATaGCCAAGTCACAACCAGAAT +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDEYAYG*PSHNQN
Trigger: ATTCTGGTTGTGACTTGGCCATCCATAGGCATATTC...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGTGGTGCAGCCTCAGTTaGAGTGACAGGAAGTTTAGA +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSWCSLS*SDRKFR
Trigger: TCTAAACTTCCTGTCACTCCAACTGAGGCTGCACCA...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTACTTCAAGATGGGAATaGGAGGCAAAAATAATTCAG +
Preference number: 4 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPTSRWE*EAKIIQ
Trigger: CTGAATTATTTTTGCCTCCCATTCCCATCTTGAAGT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGTATGCAGGTAAAATATaGCCACATATCCACACCTTC +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKYAGKI*PHIHTF
Trigger: GAAGGTGTGGATATGTGGCCATATTTTACCTGCATA...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTATTAAAGGTGCTTCAGTaGCATTCTTTCATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLLKVLQ*HSFIEE
Trigger: CTCCTCAATGAAAGAATGCCACTGAAGCACCTTTAA...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATGCTCACAATTCAAGCTaGTCTAACACGATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDAHNSS*SNTMSQ
Trigger: TTGACTCATCGTGTTAGACCAGCTTGAATTGTGAGC...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGCTTGAAGTCCAAAATTaGAGACACCATAACCACGCT +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQLEVQN*RHHNHA
Trigger: AGCGTGGTTATGGTGTCTCCAATTTTGGACTTCAAG...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATTTTCTCACCTCGCCTTaGGCTTGTATCTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDFLTSP*ACIFQI
Trigger: TATTTGGAAGATACAAGCCCAAGGCGAGGTGAGAAA...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp CATGGCCTTATTATTGTCACTTCTAGGCCAGGTTGGTaGAGTATTCACTTTCCTGGGACCCATCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: HGLIIVTSRPGW*SIHFPGTHLPI
Trigger: AATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACCTGGCCTAGAAGTGACAATAATAAGGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCTGGAAGACAGACACTaGACAGGTCAAAATGCAAAC +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSLEDRH*TGQNAN
Trigger: GTTTGCATTTTGACCTGTTCAGTGTCTGTCTTCCAG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGAACTGTGTACAATTTTaGAGAAGTGTACACACCGTG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQNCVQF*RSVHTV
Trigger: CACGGTGTGTACACTTCTTCAAAATTGTACACAGTT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGACAATTCCGGTGGTATaGGAAAGGGCATTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKTIPVV*ERAFWS
Trigger: ACTCCAAAATGCCCTTTCTCATACCACCGGAATTGT...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCACAGTAATTATACATaGGTGGTTGCTAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKHSNYT*VVASSF
Trigger: AAAGGAACTAGCAACCACTCATGTATAATTACTGTG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTTGAGGTTGGGAGTTTaGGACCAGCCTGGCCAACGT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCILRLGV*DQPGQR
Trigger: ACGTTGGCCAGGCTGGTCTCAAACTCCCAACCTCAA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACTGGTCTTGAACTCCTaGCCCCAGGTAATCCACCCA +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSLVLNS*PQVIHP
Trigger: TGGGTGGATTACCTGGGGTCAGGAGTTCAAGACCAG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCTAAGGCCTCCAGAGTaGTTTAACTCATCATCCAGT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVLRPPE*FNSSSS
Trigger: ACTGGATGATGAGTTAAATCACTCTGGAGGCCTTAG...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCAGTTAGAACGTCACTaGTGGGTATGTTTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVQLERH*WVCFRG
Trigger: GCCTCTAAAACATACCCATCAGTGACGTTCTAACTG...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCCAATGCAGCAGGTCTaGATTGGTAACTACCACATT +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSPMQQV*IGNYHI
Trigger: AATGTGGTAGTTACCAATTCAGACCTGCTGCATTGG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTTAAAATACTTGTTCTaGAAGAGATGGTACCCTCCC +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSLKYLF*KRWYPP
Trigger: GGGAGGGTACCATCTCTTTCAGAACAAGTATTTTAA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTTTCACAACTTCTTCATaGAACAAGGAGCTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPFTTSS*NKELGK
Trigger: TTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAA...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATTTATGGACAAAAGAATaGGCAATTTCCTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDLWTKE*AISCWP
Trigger: TGGCCAACAGGAAATTGCTCATTCTTTTGTCCATAA...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCTGTTTGGCTCATTTTaGAGTGATAGTCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSLFGSF*SDSQQG
Trigger: GCCTTGCTGACTATCACTTCAAAATGAGCCAAACAG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCTCCATAAACAAAACTaGCATTCTCATCCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNLHKQN*HSHPGE
Trigger: CTCCCCGGGATGAGAATGGCAGTTTTGTTTATGGAG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAACAAAGGCCGTGGCTTaGCATAAGATGGTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPTKAVA*HKMVFS
Trigger: AGAAAACACCATCTTATGGCAAGCCACGGCCTTTGT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCGTGCAATTTCACTTTaGATATGCTTCTCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDRAISL*ICFSCS
Trigger: AGAACAGGAGAAGCATATGCAAAGTGAAATTGCACG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAACACAACTTTCAATTaGCCCGCCCAATATTCATAT +
Preference number: 4 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPNTTFN*PAQYSY
Trigger: ATATGAATATTGGGCGGGGCAATTGAAAGTTGTGTT...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACAGGGAAAGGAGAGCTTaGTTGCTTCCTTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNRERRA*LLPFSL
Trigger: GAGAGAGAAAGGAAGCAAGCAAGCTCTCCTTTCCCT...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCAATGGTCAGTGACATaGAGGAGGAAACGCAGGATT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNQWSVT*RRKRRI
Trigger: AATCCTGCGTTTCCTCCTGCATGTCACTGACCATTG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGTTAGTTTGTTGGGGCTaGCATAACAAAATACCACAG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQLVCWG*HNKIPQ
Trigger: CTGTGGTATTTTGTTATGGCAGCCCCAACAAACTAA...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCATAACCACAGATTGCTaGATTTGTAGCCACATGAGT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSITTDC*ICSHMS
Trigger: ACTCATGTGGCTACAAATGCAGCAATCTGTGGTTAT...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGATGATAACCACAGATTaGTGCATTTGTAGCCACATG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQMITTD*CICSHM
Trigger: CATGTGGCTACAAATGCAGCAATCTGTGGTTATCAT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTAACACAACTCCGGTaGGATTCTCTCTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFVTQLR*DSLSIS
Trigger: AGAAATTGAGAGAGAATCCCACCGGAGTTGTGTTAC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAAGCCAGATTTCTTTTTaGTCCCTTCCTCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPSQISF*SLPPGM
Trigger: CATTCCAGGAGGAAGGGACCAAAAAGAAATCTGGCT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCAGGTCCAAGCAAAGCTaGATAATTTTGTTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSRSKQS*IILFFV
Trigger: CACGAAGAACAAAATTATCCAGCTTTGCTTGGACCT...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCACTCAACAATTCCGGTaGTATGAGAAAGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSTQQFR*YEKGHF
Trigger: AAAATGCCCTTTCTCATACCACCGGAATTGTTGAGT...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGAAGCACCAATCTGGTTaGCCACTGCCTATAATGAAG +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSKHQSG*PLPIMK
Trigger: CTTCATTATAGGCAGTGGCCAACCAGATTGGTGCTT...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGGCAACACAATCTCTTaGCTTTGTATTTGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLGNTIS*LCICVR
Trigger: TCTTACACAAATACAAAGCCAAGAGATTGTGTTGCC...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGCTCTTGTTTATCATTaGCATGGCCATGAACACAAA +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSALVYH*HGHEHK
Trigger: TTTGTGTTCATGGCCATGCCAATGATAAACAAGAGC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCACTGCCCTAAGTCATaGGTCATTGCCAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNHCPKS*VIASFH
Trigger: ATGGAAACTGGCAATGACCCATGACTTAGGGCAGTG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGGGGCACTAAACAGATaGCTAAAGGAGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIGALNR*LKEPTL
Trigger: GAGGGTGGGCTCCTTTAGCCATCTGTTTAGTGCCCC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGCAAGCTCCACCTCCTaGGTTCACACCATTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSASSTS*VHTILL
Trigger: GAGGAGAATGGTGTGAACCCAGGAGGTGGAGCTTGC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCCGAGTCTGCAATGGTaGATCTTCGTCTCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIPSLQW*IFVSGF
Trigger: AAAGCCGGAGACGAAGATTCACCATTGCAGACTCGG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAAGGAGCTCTCTTCAATaGTCGGAGGAATCCGCTCGT +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSRSSLQ*SEESAR
Trigger: ACGAGCGGATTCCTCCGATCATTGAAGAGAGCTCCT...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTCCAACTGATCTATACTaGGACTGTCATGAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFPTDLY*DCHEKG
Trigger: ACCTTTTTCATGACAGTCTCAGTATAGATCAGTTGG...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGTTTGTTCTTCGTGACTaGGAAATCAGTGATCCCTGT +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSFVLRD*EISDPC
Trigger: ACAGGGATCACTGATTTCTCAGTCACGAAGAACAAA...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAACCACCATGCGAAGCTaGTTTTTAGTAGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPTTMRS*FLVETG
Trigger: CCCTGTCTCTACTAAAAATCAGCTTCGCATGGTGGT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAACCTGGATTACTACTaGGGCAAGCAGTTTCCATTA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVNLDYY*GKQFPL
Trigger: TAATGGAAACTGCTTGCCTCAGTAGTAATCCAGGTT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGGTAGGAGCAAAATGTaGACTAATGGTCTACAAAAC +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFGRSKM*TNGLQN
Trigger: GTTTTGTAGACCATTAGTTCACATTTTGCTCCTACC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGTGGCCCAAAGGTTCTaGAAAACTGTGTGTGACAGT +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPVAQRF*KTVCDS
Trigger: ACTGTCACACACAGTTTTTCAGAACCTTTGGGCCAC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCAGCGCATGAACAGGTaGTCAACTCAGAAGACGAGC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIQRMNR*STQKTS
Trigger: GCTCGTCTTCTGAGTTGATCACCTGTTCATGCGCTG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACTTTCCCTGGCTAATTTaGAACTGCCTGTACGAGCTT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNFPWLI*NCLYEL
Trigger: AAGCTCGTACAGGCAGTTTCAAATTAGCCAGGGAAA...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGAGGAAAGAGATGGTCTaGGCACAGAGAATGAATCTA +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKRKEMV*AQRMNL
Trigger: TAGATTCATTCTCTGTGCTCAGACCATCTCTTTCCT...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATCTTCTTTCTCAAGATTaGTATGGCTATTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDLLSQD*YGYSWS
Trigger: AGACCATGAATAGCCATATCAATCTTGAGAAAGAAG...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCAACTGATCCGAGTCTaGAATGGTGAATCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNQLIRV*NGESSS
Trigger: AGACGAAGATTCACCATTGCAGACTCGGATCAGTTG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATGAGAAATCAGATACTTaGCACGTTATTGCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDEKSDT*HVIAKS
Trigger: TGACTTTGCAATAACGTGGCAAGTATCTGATTTCTC...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACTTGTGGACATATTGTTaGAGGCAGTCATCCAACCCT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNLWTYC*RQSSNP
Trigger: AGGGTTGGATGACTGCCTGCAACAATATGTCCACAA...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR GCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCATCTGAAAATGCCTTaGACTTTCTTTTTCACTAGC +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSHLKMP*TFFFTS
Trigger: GCTAGTGAAAAAGAAAGTGCAAGGCATTTTCAGATG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATTTCACTTTGCATATaGTTCTCCTGTTCTTCCATT +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKISLCI*FSCSSI
Trigger: AATGGAAGAACAGGAGAAGCATATGCAAAGTGAAAT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGAGAAAATTCCCCTCGTaGAATTTCACTTTGCATATG +
Preference number: 4 (lower is better)
Translates to: NHTADIDPFPGIELPMQQRKFPS*NFTLHM
Trigger: CATATGCAAAGTGAAATTGCACGAGGGGAATTTTCT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACCTCTTCTCTCCATCTaGCAAACACCCTTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSPLLSI*QTPLGL
Trigger: GAGACCCAAGGGTGTTTGGCAGATGGAGAGAAGAGG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCCTGTGGTCACACACTaGAAGCCTCTTCTCTCCATC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIPVVTH*KPLLSI
Trigger: GATGGAGAGAAGAGGCTTGCAGTGTGTGACCACAGG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTCAGAGTGCTATGGATTaGATGTTTATGTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVQSAMD*MFMSSQ
Trigger: TTGGGAGGACATAAACATGCAATCCATAGCACTCTG...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGGTTGGATTCTTTGTTaGTTATACCTCCAATGGCCA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVGWILC*LYLQWP
Trigger: TGGCCATTGGAGGTATAAGCAACAAAGAATCCAACC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTACCATATACCAAGCCTTaGAAAACATGGCAAAATAAA +
Preference number: 4 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLPYTKP*KTWQNK
Trigger: TTTATTTTGCCATGTTTTGCAAGGCTTGGTATATGG...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGTCTCGTTCAAACTTGTaGACATATTGTTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKSRSNL*TYCCRQ
Trigger: CTGCCTGCAACAATATGTCCACAAGTTTGAACGAGA...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTCCAACACAAGCTCCTaGTGTCCAATCCGTGTGACC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCISNTSS*CPIRVT
Trigger: GGTCACACGGATTGGACACCAGGAGCTTGTGTTGGA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTTTTAGAATATGCCTATaGATGGCCAAGTCACAACCA +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFFRICL*MAKSQP
Trigger: TGGTTGTGACTTGGCCATCCATAGGCATATTCTAAA...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGTGCTTATACCTCCAATaGCCAAATACATTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKCLYLQ*PNTFSF
Trigger: GAAAGAAAATGTATTTGGCCATTGGAGGTATAAGCA...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGACTTCTAGGCCAGGTTaGTTGAGTATTCACTTTCCT +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSTSRPG*LSIHFP
Trigger: AGGAAAGTGAATACTCAACCAACCTGGCCTAGAAGT...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGTTAGCCACCACACATaGCCTTATTATTGTCACTTC +
Preference number: 4 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSVSHHT*PYYCHF
Trigger: GAAGTGACAATAATAAGGCCATGTGTGGTGGCTAAC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAGCTCTGTAGAGATTTaGGCTAATGCAACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVSSVEI*ANATLC
Trigger: ACAGAGAGTTGCATTAGCCCAAATCTCTACAGAGCT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTTCTTTAGTGTGTAGCTaGTTTTCTTCTCCCCGACTT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVSLVCS*FSSPRL
Trigger: AAGTCGGGGAGAAGAAAACCAGCTACACACTAAAGA...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp TTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTaGGATATTGTGAATAATGCGGCAATGAACCTGCAA +
Preference number: 4 (lower is better)
Translates to: FSADGRLDCLCI*DIVNNAAMNLQ
Trigger: TTGCAGGTTCATTGCCGCATTATTCACAATATCCAAGATACACAAACAATCTAAGCGTCCATCGGCGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTTTAATGTTTGGTAAGTaGACTTCCTCCAGACATGCA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVLMFGK*TSSRHA
Trigger: TGCATGTCTGGAGGAAGTTCACTTACCAAACATTAA...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR TCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGGCCTATAATGAAGACTaGCTGCCGAATATTCACTTA +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKAYNED*LPNIHL
Trigger: TAAGTGAATATTCGGCAGTCAGTCTTCATTATAGGC...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACACAGCAAGCACTATATaGGTGAAGCCATTACAGACT +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNTASTI*VKPLQT
Trigger: AGTCTGTAATGGCTTCACTCATATAGTGCTTGCTGT...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTTCCTCAGAGAGCAGTaGCTCCAATGGTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIFLREQ*LQWSVT
Trigger: TGTCACTGACCATTGGAGTCACTGCTCTCTGAGGAA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCATTCTTCCTACAAATATaGTTGAGTTCTGACACCTGG +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPFFLQI*LSSDTW
Trigger: CCAGGTGTCAGAACTCAATCATATTTGTAGGAAGAA...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGAACTGCATCATAATTaGGTATCTCCTGCTACTTGT +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVELHHN*VSPATC
Trigger: ACAAGTAGCAGGAGATACTCAATTATGATGCAGTTC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAACCACTGTTCTTTCCTaGACCTTAGGAAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPTTVLS*TLGKPS
Trigger: TGATGGCTTTCCTAAGGTTCAGGAAAGAACAGTGGT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTCTCCCAACCTTCCTTaGAGTTGCAGTGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCISPNLP*SCSGCD
Trigger: ATCACAGCCACTGCAACTTCAAGGAAGGTTGGGAGA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTTTGCACATGGATATCTaGTTTTCTCAATACCATGTG +
Preference number: 4 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFLHMDI*FSQYHV
Trigger: CACATGGTATTGAGAAAATCAGATATCCATGTGCAA...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAAACTTTATGCCTATTaGTTAGTAACTCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVKLYAY*LVTPHS
Trigger: GGAGTGGGGAGTTACTAATCAATAGGCATAAAGTTT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTTACTTGCCACGTTATTaGAAAGTCAAAGCTGCTACA +
Preference number: 4 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVYLPRY*KVKAAT
Trigger: TGTAGCAGCTTTGACTTTGCAATAACGTGGCAAGTA...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACACATCTGAATGTTTATaGTCCAGGCAAGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNTSECL*SRQEER
Trigger: TCTCTCCTCTTGCCTGGAGCATAAACATTCAGATGT...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGTGACTGGTTTGGGCTaGATCAGGAAAATGCGAAGG +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIVTGLG*IRKMRR
Trigger: CCTTCGCATTTTCCTGATGCAGCCCAAACCAGTCAC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGTCACAAATCTTGTATaGTTCCCCACATTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPVTNLV*FPTFSQ
Trigger: CTGAGAAAATGTGGGGAAGCATACAAGATTTGTGAC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGTTGATTGTTGCCTTTaGTGTGAGAAGCTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPVDCCL*CEKLCD
Trigger: ATCACAAAGCTTCTCACAGCAAAGGCAACAATCAAC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTTGTGGGCAGAATGTTaGTTTCCACCGAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCILWAEC*FPPSTQ
Trigger: CTGGGTACTCGGTGGAAACCAACATTCTGCCCACAA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGCTGACAGTGTCACACTaGCATTATTTTGCTGCTTAT +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKLTVSH*HYFAAY
Trigger: ATAAGCAGCAAAATAATGCCAGTGTGACACTGTCAG...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGATGAGTCAATGCTATaGAAAAACAGAAGAGACCAG +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPDESML*KNRRDQ
Trigger: CTGGTCTCTTCTGTTTTTCCATAGCATTGACTCATC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATGAAGACACAAACAAATaGAAAGACATTTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDEDTNK*KDISFL
Trigger: CAGGAATGAAATGTCTTTCCATTTGTTTGTGTCTTC...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTGTTTATCTAGTTCATaGTCCATGATAACCACAGAT +
Preference number: 4 (lower is better)
Translates to: GPYIILRLKREEAVHCKSCLSSS*SMITTD
Trigger: ATCTGTGGTTATCATGGACCATGAACTAGATAAACA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp CTCAGCAGTTCCTGTAATCCTGTAACCAAAGAAGCGTaGTTGATGGCCAAGGCTTATTCTTCCTACAAATAT +
Preference number: 4 (lower is better)
Translates to: LSSSCNPVTKEA*LMAKAYSSYKY
Trigger: ATATTTGTAGGAAGAATAAGCCTTGGCCATCAACAACGCTTCTTTGGTTACAGGATTACAGGAACTGCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp CCTTACCTCCCCACCATTAACTTTTCCCTGGCTAATTaGAAACTGCCTGTACGAGCTTTAAATGAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PYLPTINFSLAN*KLPVRALNEFF
Trigger: AAAGAACTCATTTAAAGCTCGTACAGGCAGTTTCAAATTAGCCAGGGAAAAGTTAATGGTGGGGAGGTAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp ATCATAATTGAGTATCTCCTGCTACTTGTTATCTTTTaGCAGTGCAGGATGTGTGGGGGAGCAGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: IIIEYLLLLVIF*QCRMCGGAEFP
Trigger: TGGAAATTCTGCTCCCCCACACATCCTGCACTGCAAAAAGATAACAAGTAGCAGGAGATACTCAATTATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGAGGAAGCCTATATACTaGGTGATTATGAGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKRKPIY*VIMSKK
Trigger: TTTCTTGCTCATAATCACTCAGTATATAGGCTTCCT...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACACTGGCCAAGCCAATaGGCAGTCATACCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSHWPSQ*AVIPKV
Trigger: TACTTTTGGTATGACTGCTCATTGGCTTGGCCAGTG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAAAATCAAGTCAATATTaGAAGAATACTCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPKSSQY*KNTLGG
Trigger: CCCGCCTAGAGTATTCTTTCAATATTGACTTGATTT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGCATATACGATTTCATTaGAGGAAGTGGAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: SVSQLLHETRSLVKEASKHIRFH*RKWKGF
Trigger: AAATCCCTTCCACTTCCTTCAATGAAATCGTATATG...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGTTCCCATCCAATCCTaGAAACTTCCAAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIVPIQS*KLPRRA
Trigger: TGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAAC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAACTAGCTTCTTTCATTaGTGTTCAAGATGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPTSFFH*CSRCQS
Trigger: GCTCTGGCATCTTGAACAGCAATGAAAGAAGCTAGT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGGGGAGTGCAGTATGTaGCCCAAAGGTTCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSGECSM*PKGSEK
Trigger: TTTTTCAGAACCTTTGGGCCACATACTGCACTCCCC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTTCCTTTTCACTTCCTaGACCTACCAAAGCCTTGGC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIFLFTS*TYQSLG
Trigger: GCCAAGGCTTTGGTAGGTCCAGGAAGTGAAAAGGAA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGTAAGAGCAAATCTGTaGTCATCAACTAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPVRANL*SSTRCT
Trigger: TGTGCACCTAGTTGATGACCACAGATTTGCTCTTAC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGTCTCCATGTCTCCATaGAATACCAGATCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPVSMSP*NTRSFS
Trigger: AGAAAAAGATCTGGTATTTCATGGAGACATGGAGAC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACCAAAATTCATCTGTTaGAACCCTAATCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPPKFIC*NPNLQS
Trigger: GCTTTGGAGATTAGGGTTTCAACAGATGAATTTTGG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACGTTGGGTTTTGTATGTaGTGTAAGATAAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNVGFCM*CKIKVQ
Trigger: CTGGACTTTTATCTTACATCACATACAAAACCCAAC...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCTCAAAAAGGAACAATaGCACCAGTCCCTCACAATG +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCILKKEQ*HQSLTM
Trigger: CATTGTGAGGGACTGGTGGCATTGTTCCTTTTTGAG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTTGTGGACATATTGTTaGAGGCAGTCATCCAACCCT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCILWTYC*RQSSNP
Trigger: AGGGTTGGATGACTGCCTGCAACAATATGTCCACAA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCAGATGGAGTCAGTACTaGTACTACAGGAACACGAGT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIRWSQY*YYRNTS
Trigger: ACTCGTGTTCCTGTAGTAGCAGTACTGACTCCATCT...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGGTCTTTCCTCCATGTaGATACATATCTGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSGLSSM*IHICVH
Trigger: GTGGACACAGATATGTATGCACATGGAGGAAAGACC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCATTGCTGTTCAAGATaGCAGAGCCCATGCTATTCA +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIHCCSR*QSPCYS
Trigger: TGAATAGCATGGGCTCTGGCATCTTGAACAGCAATG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACTTGTTCAGTGTACACTaGAGTATTGTTGACTATAGG +
Preference number: 4 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNLFSVH*SIVDYR
Trigger: CCTATAGTCAACAATACTGCAGTGTACACTGAACAA...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACTTAGGACCAGGCAATaGTTGTTTGCACTTACTGGA +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSLRTRQ*LFALTG
Trigger: TCCAGTAAGTGCAAACAACCATTGCCTGGTCCTAAG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp TTCCTGGTATTGAACTGCCAATGCAGCAGGTCTGAATaGGTAACTACCACATTCATGGTGATTTTTCACATA +
Preference number: 4 (lower is better)
Translates to: FLVLNCQCSRSE*VTTTFMVIFHI
Trigger: TATGTGAAAAATCACCATGAATGTGGTAGTTACCAATTCAGACCTGCTGCATTGGCAGTTCAATACCAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp ATTCAAATGTCAGACAGATTTACTTACTCGAGCTCTTaGGCGGATGAAAAGTTTTGTGTCAATACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: IQMSDRFTYSSS*ADEKFCVNTSG
Trigger: CCCTGAGGTATTGACACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAGTAAATCTGTCTGACATTTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp GCATATAGAGAACCTGCATATATAAAGCTGTGTGGGTaGGATTCTTTGTTGCTTATACCTCCAATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: AYREPAYIKLCG*DSLLLIPPMAK
Trigger: TTTGGCCATTGGAGGTATAAGCAACAAAGAATCCAACCCACACAGCTTTATATATGCAGGTTCTCTATATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCCTGCTTCTATCTGCTTaGTGCAAATTCCCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCILLLSA*CKFPKV
Trigger: GACTTTTGGGAATTTGCATCAAGCAGATAGAAGCAG...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTACTTGTTATCTTTTTaGAGTGCAGGATGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIYLLSF*SAGCVG
Trigger: CCCCACACATCCTGCACTGCAAAAAGATAACAAGTA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACACTCTGTTGATTGTTaGCTTTGCTGTGAGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSHSVDC*LCCEKL
Trigger: AAGCTTCTCACAGCAAAGGCAACAATCAACAGAGTG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGTAACACAACTCCGGTaGGATTCTCTCTCAATTTCT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIVTQLR*DSLSIS
Trigger: AGAAATTGAGAGAGAATCCCACCGGAGTTGTGTTAC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAAATGGGTCTAGTCAGTaGAAGAACATTTCTCTCATT +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPNGSSQ*KNISLI
Trigger: AATGAGAGAAATGTTCTTCCACTGACTAGACCCATT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGAGTATTCACTTTCCTaGGACCCATCTCCCAATTTA +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIEYSLS*DPSPNL
Trigger: TAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp GAACCTGCATATATAAAGCTGTGTGGGTTGGATTCTTaGTTGCTTATACCTCCAATGGCCAAATACATTTTC +
Preference number: 4 (lower is better)
Translates to: EPAYIKLCGLDS*LLIPPMAKYIF
Trigger: GAAAATGTATTTGGCCATTGGAGGTATAAGCAACAAAGAATCCAACCCACACAGCTTTATATATGCAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp TTTGCATTCCCATCAACAGTATGCAAGGGTTCCAATTaGTCCACTTCTTCACCAATATTTGTTGTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: FAFPSTVCKGSN*STSSPIFVVFW
Trigger: CCAAAACACAACAAATATTGGTGAAGAAGTGGACAAATTGGAACCCTTGCATACTGTTGATGGGAATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp GTGTACACTGCAGTATTGTTGACTATAGGTGCAATATaGTACCACAAATCTCTAGAGCTTATTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: VYTAVLLTIGAI*YHKSLELIHLT
Trigger: AGTCAGGTGAATAAGCTCTAGAGATTTGTGGTACAATATTGCACCTATAGTCAACAATACTGCAGTGTACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGGAGTGATGTTTTTATaGGTGAAGGTAAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIGVMFL*VKVSFI
Trigger: GATGAAGCTTACCTTCACTCATAAAAACATCACTCC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCATTATATGTTGTCTTCTaGTGCTTTTTCCCACTCAGC +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSLYVVF*CFFPLS
Trigger: GCTGAGTGGGAAAAAGCATCAGAAGACAACATATAA...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCACAATACCTCAGGGTTTaGTGCAATACTAACAACCTA +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSQYLRV*CNTNNL
Trigger: TAGGTTGTTAGTATTGCAGCAAACCCTGAGGTATTG...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAAGGTCCAAGCAAAGCTaGATAATTTTGTTCTTCGTG +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSRSKQS*IILFFV
Trigger: CACGAAGAACAAAATTATCCAGCTTTGCTTGGACCT...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCATATTCACTTAAAGGATaGCTGTTCAATTCACAAGTG +
Preference number: 4 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPYSLKG*LFNSQV
Trigger: CACTTGTGAATTGAACAGCCATCCTTTAAGTGAATA...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCAAGCTACCCAGTGTATaGTATTTTGTTATTGCAGCC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIKLPSV*YFVIAA
Trigger: GGCTGCAATAACAAAATACCATACACTGGGTAGCTT...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp CCTGCATATATAAAGCTGTGTGGGTTGGATTCTTTGTaGCTTATACCTCCAATGGCCAAATACATTTTCTTT +
Preference number: 4 (lower is better)
Translates to: PAYIKLCGLDSL*LIPPMAKYIFF
Trigger: AAAGAAAATGTATTTGGCCATTGGAGGTATAAGCAACAAAGAATCCAACCCACACAGCTTTATATATGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp GGTCTTTTGTGGTTTCATATGGACTGTAGAATTGTTTaGTCCCTGTCTTCAGATGACATCGTCTCATATATA +
Preference number: 4 (lower is better)
Translates to: GLLWFHMDCRIV*SLSSDDIVSYI
Trigger: TATATATGAGACGATGTCATCTGAAGACAGGGACAAAACAATTCTACAGTCCATATGAAACCACAAAAGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR TCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGAAGGTAACACATTGTaGAAGTATAGGGACATTAAC +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIEGNTL*KYRDIN
Trigger: GTTAATGTCCCTATACTTTCACAATGTGTTACCTTC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCGCCCACCATAATGACTaGATTTTAACTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIAHHND*ILTESL
Trigger: AAGTGATTCAGTTAAAATGCAGTCATTATGGTGGGC...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAAATACCACTTCAAGATaGGAATGGGAGGCAAAAATA +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSNTTSR*EWEAKI
Trigger: TATTTTTGCCTCCCATTCCCATCTTGAAGTGGTATT...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CCA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTGCTATTCAGATCCTTaGCCCATTTGTAAAAATTGG +
Preference number: 4 (lower is better)
Translates to: YIFFIHFSADGRLDCLCICYSDP*PICKNW
Trigger: CCAATTTTTACAAATGGGCCAAGGATCTGAATAGCA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR GCA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAAAATTATACAGACCCTaGTTTAGAAAGGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSKLYRP*FRKAHN
Trigger: ATTGTGAGCCTTTCTAAAGCAGGGTCTGTATAATTT...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
3UTR CAA 72 bp TCAGTAAGAACACAAGGTGAGATCTATCTTAACAAATaGTTCAGTGTACACTGCAGTATTGTTGACTATAGG +
Preference number: 4 (lower is better)
Translates to: SVRTQGEIYLNK*FSVHCSIVDYR
Trigger: CCTATAGTCAACAATACTGCAGTGTACACTGAACAATTTGTTAAGATAGATCTCACCTTGTGTTCTTACTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 90 bp CCGCCGGGATCCCGGGCACAGCTGCTGCTCCCGAGCGACGGCAGCTaGAGGCACGCCGGGCTGCGACCCCAGACCCCTGGCCTCGGCTCG +
Preference number: 5 (lower is better)
Translates to: PPGSRAQLLLPSDGS*RHAGLRPQTPGLGS
Trigger: CGAGCCGAGGCCAGGGGTCTGGGGTCGCAGCCCGGCGTGCCTGCAGCTGCCGTCGCTCGGGAGCAGCAGCTGTGCCCGGGATCCCGGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 90 bp GAGCGACGGCAGCTGCAGGCACGCCGGGCTGCGACCCCAGACCCCTaGCCTCGGCTCGGCACGGGAGCCTCCCGGCCCGCGACCACTTCC +
Preference number: 5 (lower is better)
Translates to: ERRQLQARRAATPDP*PRLGTGASRPATTS
Trigger: GGAAGTGGTCGCGGGCCGGGAGGCTCCCGTGCCGAGCCGAGGCCAGGGGTCTGGGGTCGCAGCCCGGCGTGCCTGCAGCTGCCGTCGCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 90 bp CACAGCTGCTGCTCCCGAGCGACGGCAGCTGCAGGCACGCCGGGCTaGGACCCCAGACCCCTGGCCTCGGCTCGGCACGGGAGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: HSCCSRATAAAGTPG*DPRPLASARHGSLP
Trigger: CGGGAGGCTCCCGTGCCGAGCCGAGGCCAGGGGTCTGGGGTCGCAGCCCGGCGTGCCTGCAGCTGCCGTCGCTCGGGAGCAGCAGCTGTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 90 bp CGCGCCCGCGGCTGCTCCCCTGCGCCCGAGCGACTCCGTCAAGACTaGATGGCCGCGGTCAGCCAGTCGTCCCAGCGCGGCTCCGCCAGG +
Preference number: 5 (lower is better)
Translates to: RARGCSPAPERLRQD*MAAVSQSSQRGSAR
Trigger: CCTGGCGGAGCCGCGCTGGGACGACTGGCTGACCGCGGCCATGCAGTCTTGACGGAGTCGCTCGGGCGCAGGGGAGCAGCCGCGGGCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 90 bp CCCGCGGCTGCTCCCCTGCGCCCGAGCGACTCCGTCAAGACTGCATaGCCGCGGTCAGCCAGTCGTCCCAGCGCGGCTCCGCCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PAAAPLRPSDSVKTA*PRSASRPSAAPPGE
Trigger: CTCCCCTGGCGGAGCCGCGCTGGGACGACTGGCTGACCGCGGCCATGCAGTCTTGACGGAGTCGCTCGGGCGCAGGGGAGCAGCCGCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 90 bp ATCTCTCGAGGCGCGATCGGCTCTCCCTCGGCCGGTCTTCTCGCCTaGTGGCTCTCCGGGGTCCCCGCTCCGCGTGCGCTGGCGTCCCGG +
Preference number: 5 (lower is better)
Translates to: ISRGAIGSPSAGLLA*WLSGVPAPRALASR
Trigger: CCGGGACGCCAGCGCACGCGGAGCGGGGACCCCGGAGAGCCAGCAGGCGAGAAGACCGGCCGAGGGAGAGCCGATCGCGCCTCGAGAGAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS TCA 90 bp ACGGAGCCCGGTCCAGCCACGCCAGCAGGGCCTTGGCGGCGCCGATaGGCTCCACCACCGAGGTCAGGAACTCATTGGGGGCCTTGCGGG +
Preference number: 5 (lower is better)
Translates to: TEPGPATPAGPWRRR*APPPRSGTHWGPCG
Trigger: CCCGCAAGGCCCCCAATGAGTTCCTGACCTCGGTGGTGGAGCTCATCGGCGCCGCCAAGGCCCTGCTGGCGTGGCTGGACCGGGCTCCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS GCA 90 bp AACCGCTTCGCCTCTCGCTGGGCTGGAGAGTCGCAGATAAAGTGCTaGTGCCTGCGCTCCGGTGCCCCTTCCCGGGAGGGCGCGCCCGCG +
Preference number: 5 (lower is better)
Translates to: NRFASRWAGESQIKC*CLRSGAPSREGAPA
Trigger: CGCGGGCGCGCCCTCCCGGGAAGGGGCACCGGAGCGCAGGCAGCAGCACTTTATCTGCGACTCTCCAGCCCAGCGAGAGGCGAAGCGGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 90 bp CTTGGTCACGGGTTCCATGGTAAACCGCTTCGCCTCTCGCTGGGCTaGAGAGTCGCAGATAAAGTGCTGCTGCCTGCGCTCCGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: LGHGFHGKPLRLSLG*RVADKVLLPALRCP
Trigger: GGGGCACCGGAGCGCAGGCAGCAGCACTTTATCTGCGACTCTCCAGCCCAGCGAGAGGCGAAGCGGTTTACCATGGAACCCGTGACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS TCA 90 bp TTGGGGCAGGAGCCAGGCAGGTGGCCTGAGCAGGGTCCCTCTCAGTaGGTCAACAGTTTGAGGCGCGTAAACCAGCTGACCAGGAGGGAC +
Preference number: 5 (lower is better)
Translates to: LGQEPGRWPEQGPSQ*VNSLRRVNQLTRRD
Trigger: GTCCCTCCTGGTCAGCTGGTTTACGCGCCTCAAACTGTTGACTCACTGAGAGGGACCCTGCTCAGGCCACCTGCCTGGCTCCTGCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CCA 90 bp ACCCCGGACCAGATGCCGCTCGGTCGTGGGTCTGGAGAACCGGTATaGGGGAGAGGAGCTCTCTTCAATGATCGGAGGAATCCGCTCGTT +
Preference number: 5 (lower is better)
Translates to: TPDQMPLGRGSGEPV*GRGALFNDRRNPLV
Trigger: AACGAGCGGATTCCTCCGATCATTGAAGAGAGCTCCTCTCCCCCATACCGGTTCTCCAGACCCACGACCGAGCGGCATCTGGTCCGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CCA 90 bp CTCCACTTGGTCACGGGTTCCATGGTAAACCGCTTCGCCTCTCGCTaGGCTGGAGAGTCGCAGATAAAGTGCTGCTGCCTGCGCTCCGGT +
Preference number: 5 (lower is better)
Translates to: LHLVTGSMVNRFASR*AGESQIKCCCLRSG
Trigger: ACCGGAGCGCAGGCAGCAGCACTTTATCTGCGACTCTCCAGCCCAGCGAGAGGCGAAGCGGTTTACCATGGAACCCGTGACCAAGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS TCA 90 bp CACTGTAAAAGCAAGGCACTTGGGGCAGGAGCCAGGCAGGTGGCCTaGGCAGGGTCCCTCTCAGTGAGTCAACAGTTTGAGGCGCGTAAA +
Preference number: 5 (lower is better)
Translates to: HCKSKALGAGARQVA*AGSLSVSQQFEARK
Trigger: TTTACGCGCCTCAAACTGTTGACTCACTGAGAGGGACCCTGCTCAGGCCACCTGCCTGGCTCCTGCCCCAAGTGCCTTGCTTTTACAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS TCA 90 bp CTCCTCCTGATCCTCCAAGGCTCCCCAGAAGCTTCTCCTCCTTTTTaGGGCCTTCTCTGGACACCAACCACGCACCAGCTTCCTCACCAG +
Preference number: 5 (lower is better)
Translates to: LLLILQGSPEASPPF*GLLWTPTTHQLPHQ
Trigger: CTGGTGAGGAAGCTGGTGCGTGGTTGGTGTCCAGAGAAGGCCTCAAAAAGGAGGAGAAGCTTCTGGGGAGCCTTGGAGGATCAGGAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CCA 90 bp AAACCTGACGACGGCTCCCAATGTGCCCCCAGGAACAGACAGCAGTaGGCCAACAAGCTGGCAGTCTTTAGCTCTGGGCCTGCCTATAAG +
Preference number: 5 (lower is better)
Translates to: KPDDGSQCAPRNRQQ*ANKLAVFSSGPAYK
Trigger: CTTATAGGCAGGCCCAGAGCTAAAGACTGCCAGCTTGTTGGCCCACTGCTGTCTGTTCCTGGGGGCACATTGGGAGCCGTCGTCAGGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433165.6
ENST00000454664.2
CDS TCA 90 bp GTTGCAGGCAGTCATCCAACCCTATCTGGTCTGGCCAACTCCTCCTaGTCCTCCAAGGCTCCCCAGAAGCTTCTCCTCCTTTTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: VAGSHPTLSGLANSS*SSKAPQKLLLLFEA
Trigger: GGCCTCAAAAAGGAGGAGAAGCTTCTGGGGAGCCTTGGAGGATCAGGAGGAGTTGGCCAGACCAGATAGGGTTGGATGACTGCCTGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACACGCCAGCAGGGCCTaGGCGGCGCCGATGAGCTCC +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPHASRA*AAPMSS
Trigger: GGAGCTCATCGGCGCCGCCAAGGCCCTGCTGGCGTG...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS GCA 90 bp CCACCACCGAGGTCAGGAACTCATTGGGGGCCTTGCGGGAGGTGTTaGCATCGTAAGCGGGACTTTTCCGTCGGCTACTTATGTAATTCT +
Preference number: 5 (lower is better)
Translates to: PPPRSGTHWGPCGRC*HRKRDFSVGYLCNS
Trigger: AGAATTACATAAGTAGCCGACGGAAAAGTCCCGCTTACGATGGCAACACCTCCCGCAAGGCCCCCAATGAGTTCCTGACCTCGGTGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS TCA 90 bp TGGTTTCCACCGAGTACCCAGGCAACTGATCCGAGTCTGCAATGGTaGATCTTCGTCTCCGGCTTTCCTGGTCCAAGAAGGAATTCGGGG +
Preference number: 5 (lower is better)
Translates to: WFPPSTQATDPSLQW*IFVSGFPGPRRNSG
Trigger: CCCCGAATTCCTTCTTGGACCAGGAAAGCCGGAGACGAAGATTCACCATTGCAGACTCGGATCAGTTGCCTGGGTACTCGGTGGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424998.3
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS TCA 90 bp CCAGCTGACCAGGAGGGACGGTTCTGTGGACGAGGACTTCGTAGCTaGGGAGCCAGATTTCTTTTTGGTCCCTTCCTCCTGGAATGGAAT +
Preference number: 5 (lower is better)
Translates to: PADQEGRFCGRGLRS*GARFLFGPFLLEWN
Trigger: ATTCCATTCCAGGAGGAAGGGACCAAAAAGAAATCTGGCTCCTCAGCTACGAAGTCCTCGTCCACAGAACCGTCCCTCCTGGTCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CCA 90 bp GACTTCTCCTTCTTCAGTGAGGTATCCATAGTGCTTTCAGGGGACTaGGTTGTCGCGGGTGGAGGTGAGGTCTGTACAAGAGGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: DFSFFSEVSIVLSGD*VVAGGGEVCTRGGF
Trigger: GAAGCCACCTCTTGTACAGACCTCACCTCCACCCGCGACAACCCAGTCCCCTGAAAGCACTATGGATACCTCACTGAAGAAGGAGAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424998.3
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGGAGCAGGAGTAAAGTaGAAAGACCCGGTGGGGCGC +
Preference number: 5 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLGAGVK*KDPVGR
Trigger: GCGCCCCACCGGGTCTTTCAACTTTACTCCTGCTCC...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAACTCATTGGGGGCCTaGCGGGAGGTGTTGCCATCG +
Preference number: 5 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPNSLGA*REVLPS
Trigger: CGATGGCAACACCTCCCGCAAGGCCCCCAATGAGTT...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGGGAACAAGGAGCCCTaGCCTCCCCTGACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFGNKEP*PPLTAA
Trigger: TGCTGCCGTCAGGGGAGGCAAGGGCTCCTTGTTCCC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 90 bp GCTCCCAATGTGCCCCCAGGAACAGACAGCAGTGGGCCAACAAGCTaGCAGTCTTTAGCTCTGGGCCTGCCTATAAGAATAGCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: APNVPPGTDSSGPTS*QSLALGLPIRIAFK
Trigger: TTTGAAAGCTATTCTTATAGGCAGGCCCAGAGCTAAAGACTGCCAGCTTGTTGGCCCACTGCTGTCTGTTCCTGGGGGCACATTGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433165.6
ENST00000454664.2
CDS GCA 90 bp CAGAATGTTGGTTTCCACCGAGTACCCAGGCAACTGATCCGAGTCTaGAATGGTGAATCTTCGTCTCCGGCTTTCCTGGTCCAAGAAGGA +
Preference number: 5 (lower is better)
Translates to: QNVGFHRVPRQLIRV*NGESSSPAFLVQEG
Trigger: TCCTTCTTGGACCAGGAAAGCCGGAGACGAAGATTCACCATTGCAGACTCGGATCAGTTGCCTGGGTACTCGGTGGAAACCAACATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424998.3
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGAGGTCAGGAACTCATaGGGGGCCTTGCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPEVRNS*GALREV
Trigger: CACCTCCCGCAAGGCCCCCAATGAGTTCCTGACCTC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGAGGTCAGGAACTCATaGGGGGCCTTGCGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSEVRNS*GALREV
Trigger: CACCTCCCGCAAGGCCCCCAATGAGTTCCTGACCTC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGCGTGCGCGCTCGGGTaGCAAAGTTTCAGCTCCGGT +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSACALG*QSFSSG
Trigger: ACCGGAGCTGAAACTTTGCAACCCGAGCGCGCACGC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTTGTTTGGGGCTCCACTaGGTCACGGGTTCCATGGTA +
Preference number: 5 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPCLGLH*VTGSMV
Trigger: TACCATGGAACCCGTGACCAAGTGGAGCCCCAAACA...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGGCAGGAGAATCGCTaGAACCTGGAAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLRQENR*NLEGGG
Trigger: ACCTCCACCTTCCAGGTTCAAGCGATTCTCCTGCCT...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTATCTGCCAAACACCCTaGGGTCTCCATGTCTCCATG +
Preference number: 5 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPICQTP*GLHVSM
Trigger: CATGGAGACATGGAGACCCAAGGGTGTTTGGCAGAT...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGGACCTACCAAAGCCTaGGCCTTGGGTGGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVGPTKA*ALGGEA
Trigger: TGCCTCCCCACCCAAGGCCAAGGCTTTGGTAGGTCC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS TCA 90 bp ATTTTTGTGGGCAGAATGTTGGTTTCCACCGAGTACCCAGGCAACTaGTCCGAGTCTGCAATGGTGAATCTTCGTCTCCGGCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: IFVGRMLVSTEYPGN*SESAMVNLRLRLSW
Trigger: CCAGGAAAGCCGGAGACGAAGATTCACCATTGCAGACTCGGATCAGTTGCCTGGGTACTCGGTGGAAACCAACATTCTGCCCACAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS TCA 90 bp AGTGGTCAGGTCCAAGCAAAGCTGGATAATTTTGTTCTTCGTGACTaGGAAATCAGTGATCCCTGTAAACGGAGCCCGGTCCAGCCACGC +
Preference number: 5 (lower is better)
Translates to: SGQVQAKLDNFVLRD*EISDPCKRSPVQPR
Trigger: GCGTGGCTGGACCGGGCTCCGTTTACAGGGATCACTGATTTCTCAGTCACGAAGAACAAAATTATCCAGCTTTGCTTGGACCTGACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS GCA 90 bp TGCTCGCCGTTGATCTTCTCTCGTTCAAACTTGTGGACATATTGTTaGAGGCAGTCATCCAACCCTATCTGGTCTGGCCAACTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: CSPLIFSRSNLWTYC*RQSSNPIWSGQLLL
Trigger: CAGGAGGAGTTGGCCAGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CCA 90 bp ATCTGCAGCAGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTTGTaGACATATTGTTGCAGGCAGTCATCCAACCCTATCTGGTCTGGC +
Preference number: 5 (lower is better)
Translates to: ICSSCSPLIFSRSNL*TYCCRQSSNPIWSG
Trigger: GCCAGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGCTGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CCA 90 bp ATCTGCAGCAGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTTGTaGACATATTGTTGCAGGCAGTCATCCAACCCTCTAGTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: ICSSCSPLIFSRSNL*TYCCRQSSNPLVQS
Trigger: GGACTGGACTAGAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGCTGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCCAGGCAATGGTTGTTaGCACTTACTGGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKPGNGC*HLLDPP
Trigger: TGGAGGGTCCAGTAAGTGCAAACAACCATTGCCTGG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGGACCAGGCAATGGTaGTTTGCACTTACTGGACCC +
Preference number: 5 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLRTRQW*FALTGP
Trigger: GGGTCCAGTAAGTGCAAACAACCATTGCCTGGTCCT...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCCCATTTCCCTCCTTTaGTCTCCACAAGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSPISLL*SPQAST
Trigger: GGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGAGCAGCTGCTCGCCGTaGATCTTCTCTCGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKSSCSP*IFSRSN
Trigger: GTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGCT...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAACTCATTGGGGGCCTaGCGGGAGGTGTTGCCATCG +
Preference number: 5 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVNSLGA*REVLPS
Trigger: CGATGGCAACACCTCCCGCAAGGCCCCCAATGAGTT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGCACCCTCCTAGTGTGTaGAACACCCTGTGGTCACAC +
Preference number: 5 (lower is better)
Translates to: NHTADIDPFPGIELPMQQHPPSV*NTLWSH
Trigger: GTGTGACCACAGGGTGTTCAACACACTAGGAGGGTG...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGGCCCATGACCAGCTCTaGTTTATCATTGGCATGGCC +
Preference number: 5 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKAHDQL*FIIGMA
Trigger: GGCCATGCCAATGATAAACAAGAGCTGGTCATGGGC...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGTTAGACCTCAGCCATTaGCCTTGCCTTAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: NHTADIDPFPGIELPMQQLDLSH*PCLSPS
Trigger: GCTGGGGCTAAGGCAAGGCAAATGGCTGAGGTCTAA...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGTTTGTGGGCAGAATGTaGGTTTCCACCGAGTACCCA +
Preference number: 5 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKFVGRM*VSTEYP
Trigger: TGGGTACTCGGTGGAAACCAACATTCTGCCCACAAA...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTCTTGTGGACATATTGTaGCAGGCAGTCATCCAACCC +
Preference number: 5 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPLVDIL*QAVIQP
Trigger: GGGTTGGATGACTGCCTGCAACAATATGTCCACAAG...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCAGTCCACCACTTGTTaGGGGCTCCACTTGGTCACG +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSQSTTC*GLHLVT
Trigger: CGTGACCAAGTGGAGCCCCAAACAAGTGGTGGACTG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGGAACTCACCTTGATCTaGGACTTCCCAGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: NHTADIDPFPGIELPMQQELTLI*DFPASR
Trigger: TCTGGAGGCTGGGAAGTCCAAGATCAAGGTGAGTTC...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTCTCATATGGATGACCTaGGGACTTACTGGGGTAACT +
Preference number: 5 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPLIWMT*GLTGVT
Trigger: AGTTACCCCAGTAAGTCCCAAGGTCATCCATATGAG...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTGAGTTGGTTATCCCCTaGACTGTCAACTCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPELVIP*TVNSAA
Trigger: AGCTGCAGAGTTGACAGTCAAGGGGATAACCAACTC...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS TCA 90 bp TTGATGTACATGCCCAGGCCTTCCCCAGGTTTAATGTTTGGTAAGTaGACTTCCTCCAGACATGCACACTGGCTCATCACAGGATCTGTG +
Preference number: 5 (lower is better)
Translates to: LMYMPRPSPGLMFGK*TSSRHAHWLITGSV
Trigger: CACAGATCCTGTGATGAGCCAGTGTGCATGTCTGGAGGAAGTTCACTTACCAAACATTAAACCTGGGGAAGGCCTGGGCATGTACATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000433165.6
ENST00000454664.2
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTAGGACCAGGCAATGGTaGTTTGCACTTACTGGACCC +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFRTRQW*FALTGP
Trigger: GGGTCCAGTAAGTGCAAACAACCATTGCCTGGTCCT...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCTTGTGGACATATTGTaGCAGGCAGTCATCCAACCC +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSLVDIL*QAVIQP
Trigger: GGGTTGGATGACTGCCTGCAACAATATGTCCACAAG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAGTCCAGTCCACCACTaGTTTGGGGCTCCACTTGGT +
Preference number: 5 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVSPVHH*FGAPLG
Trigger: ACCAAGTGGAGCCCCAAACAAGTGGTGGACTGGACT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTACCCCTTTCCTGGTATaGAACTGCCAATGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFTPFLV*NCQCSR
Trigger: CCTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGT...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGGTGCCCAGCTGGTCTaGAACTTCTGGTCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSGAQLV*NFWSQA
Trigger: TGCTTGAGACCAGAAGTTCAAGACCAGCTGGGCACC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTGGCATCATCAGAGGTaGTGTTTGCAGCTAGGCAAC +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSWHHQR*CLQLGN
Trigger: GTTGCCTAGCTGCAAACACAACCTCTGATGATGCCA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGCACCAGCCTCTCTATaGGCATCATCAGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFAPASL*ASSEVV
Trigger: CACAACCTCTGATGATGCCAATAGAGAGGCTGGTGC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACCAGGCAATGGTTGTTaGCACTTACTGGACCCTCCA +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPPGNGC*HLLDPP
Trigger: TGGAGGGTCCAGTAAGTGCAAACAACCATTGCCTGG...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACCCCATTTCCCTCCTTTaGTCTCCACAAGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNPISLL*SPQAST
Trigger: GGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGG...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTCATGAAACAAGGAGCTaGGTAAAGGAGGCCAGCAAG +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFHETRS*VKEASK
Trigger: CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATG...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAGTAACCAAAGAAGCGTaGTTGATGGCCAAGGCTTAT +
Preference number: 5 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLVTKEA*LMAKAY
Trigger: ATAAGCCTTGGCCATCAACAACGCTTCTTTGGTTAC...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AACAGATGGCTAAAGGAGCCCACCCTCAGAATCCAAAAGAGGGTCCCGAAACCTCCATTTTGTGTCACTTaGTGTCTTCTTTTGCTTCCC +
Preference number: 5 (lower is better)
Translates to: NRWLKEPTLRIQKRVPKPPFCVT*CLLLLP
Trigger: GGGAAGCAAAAGAAGACACAAAGTGACACAAAATGG...AGGTTTCGGGACCCTCTTTTGGATTCTGAGGGTGGGCTCCTTTAGCCATCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTATATCCAGAAATAGGGTaGCTAGGTCACATGGCAGTT +
Preference number: 5 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLYPEIG*LGHMAV
Trigger: AACTGCCATGTGACCTAGCAACCCTATTTCTGGATA...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGTTCTCTCGTTCAAACTaGTGGACATATTGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKFSRSN*WTYCCR
Trigger: CCTGCAACAATATGTCCACAAGTTTGAACGAGAGAA...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACAGCAGCTGCTCGCCGTaGATCTTCTCTCGTTCAAAC +
Preference number: 5 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNSSCSP*IFSRSN
Trigger: GTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGCT...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp AAGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTCATGAGTCTCATGCTTaGCTGGTGACATTCAAATGT +
Preference number: 5 (lower is better)
Translates to: KTNRLYPFPSFCLHKPAPHESHA*LVTFKC
Trigger: ACATTTGAATGTCACCAGCAAAGCATGAGACTCATG...AGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGATTACCAAATGTGTGTaGAGGTCCTCAACTGGGGTT +
Preference number: 5 (lower is better)
Translates to: NHTADIDPFPGIELPMQQITKCV*RSSTGV
Trigger: AACCCCAGTTGAGGACCTCAACACACATTTGGTAAT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCACCAAAGCCTTGGCCTaGGGTGGGGAGGCATCCAGT +
Preference number: 5 (lower is better)
Translates to: YIFFIHFSADGRLDCLCITKALA*GGEASS
Trigger: ACTGGATGCCTCCCCACCCAAGGCCAAGGCTTTGGT...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTTCTGTCCTCAGGGCATaGCAACCCATTAGGCTGAAT +
Preference number: 5 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVSVLRA*QPIRLN
Trigger: ATTCAGCCTAATGGGTTGCAATGCCCTGAGGACAGA...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCTTTTCCCTGGCTAATTaGAAACTGCCTGTACGAGCT +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSFSLAN*KLPVRA
Trigger: AGCTCGTACAGGCAGTTTCAAATTAGCCAGGGAAAA...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGTCTAGGCCAGGTTGGTaGAGTATTCACTTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SVSQLLHETRSLVKEASKSRPGW*SIHFPG
Trigger: CCCAGGAAAGTGAATACTCAACCAACCTGGCCTAGA...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTCATCTCCCTGTGATTTaGACTTCACTTTCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFHLPVI*TSLSLL
Trigger: GAGCAGGGAAAGTGAAGTCAAAATCACAGGGAGATG...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGCATCAGAGGTTGTGTTaGCAGCTAGGCAACACTGCA +
Preference number: 5 (lower is better)
Translates to: SVSQLLHETRSLVKEASKHQRLC*QLGNTA
Trigger: TGCAGTGTTGCCTAGCTGCAAACACAACCTCTGATG...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATTTTTGCCAACAGACATaGGGCTGTGTTCTACAAAGG +
Preference number: 5 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDFCQQT*GCVLQR
Trigger: CCTTTGTAGAACACAGCCCAATGTCTGTTGGCAAAA...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGATACTTGCCACGTTATaGCAAAGTCAAAGCTGCTAC +
Preference number: 5 (lower is better)
Translates to: NHTADIDPFPGIELPMQQILATL*QSQSCY
Trigger: GTAGCAGCTTTGACTTTGCAATAACGTGGCAAGTAT...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGGAGAAATCAGATACTaGCCACGTTATTGCAAAGTC +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSGEIRY*PRYCKV
Trigger: GACTTTGCAATAACGTGGCAAGTATCTGATTTCTCC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAGTTGAGGTTGGGAGTTaGAGACCAGCCTGGCCAACG +
Preference number: 5 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSVEVGS*RPAWPT
Trigger: CGTTGGCCAGGCTGGTCTCAAACTCCCAACCTCAAC...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCAACACAACTTTCAATaGCCCCGCCCAATATTCATA +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSQHNFQ*PRPIFI
Trigger: TATGAATATTGGGCGGGGCAATTGAAAGTTGTGTTG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTGGGTTGGATTCTTTGTaGCTTATACCTCCAATGGCC +
Preference number: 5 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVGLDSL*LIPPMA
Trigger: GGCCATTGGAGGTATAAGCAACAAAGAATCCAACCC...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATCATACTGCTGACATCGACCCCTTTCCTGGTATTGAACTGCCAATGCAGCAGCTGTTCTTAGTCCTCTaGCCAAGTCTATTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: NHTADIDPFPGIELPMQQLFLVL*PSLFSS
Trigger: AGAGGAAAATAGACTTGGCAAGAGGACTAAGAACAG...CTGCTGCATTGGCAGTTCAATACCAGGAAAGGGGTCGATGTCAGCAGTATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGTGTGAGATGAGGGTTTaGCTTTGTCATCCAGACTGG +
Preference number: 5 (lower is better)
Translates to: SVSQLLHETRSLVKEASKCEMRV*LCHPDW
Trigger: CCAGTCTGGATGACAAAGCAAAACCCTCATCTCACA...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTCATAGGCTTGGCATCTaGAACAGCAACAAAAGAAGG +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFHRLGI*NSNKRR
Trigger: CCTTCTTTTGTTGCTGTTCAAGATGCCAAGCCTATG...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGCACGGTGGTTTTGATTaGCATTGCCCTGATGATCAG +
Preference number: 5 (lower is better)
Translates to: SVSQLLHETRSLVKEASKHGGFD*HCPDDQ
Trigger: CTGATCATCAGGGCAATGCAAATCAAAACCACCGTG...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTAGTTTGCTGATTAACTaGAATGACTTCGTCACCAGC +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFSLLIN*NDFVTS
Trigger: GCTGGTGACGAAGTCATTCAAGTTAATCAGCAAACT...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp AGACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTATTTCAGATAAAGAAGTaGGACCACAAACCAACACAT +
Preference number: 5 (lower is better)
Translates to: RQTGSTHFPPFVSTSQHLFQIKK*DHKPTH
Trigger: ATGTGTTGGTTTGTGGTCCAACTTCTTTATCTGAAA...TAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTTGCAGCAGGTCTGAATaGGTAACTACCACATTCATG +
Preference number: 5 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVCSRSE*VTTTFM
Trigger: CATGAATGTGGTAGTTACCAATTCAGACCTGCTGCA...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACGCAGAGTGCTATGGATaGCATGTTTATGTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNAECYG*HVYVLP
Trigger: TGGGAGGACATAAACATGCAATCCATAGCACTCTGC...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGATGAGCAATTTCCTGTaGGCCAGCTCTGAATACCTT +
Preference number: 5 (lower is better)
Translates to: SVSQLLHETRSLVKEASKMSNFL*ASSEYL
Trigger: AAGGTATTCAGAGCTGGCCAACAGGAAATTGCTCAT...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCACACTGGCATTATTTaGCTGCTTATGGACAAAAGA +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSHTGII*LLMDKR
Trigger: TCTTTTGTCCATAAGCAGCAAAATAATGCCAGTGTG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACAAACAGGCTCTACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGCAAATCAAGTCAATATaGAAAGAATACTCTAGGCGG +
Preference number: 5 (lower is better)
Translates to: TNRLYPFPSFCLHKPAPKQIKSI*KEYSRR
Trigger: CCGCCTAGAGTATTCTTTCAATATTGACTTGATTTG...CTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGTAGAGCCTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCGCTATTCATGGTCTTTaGTGGTTTCATATGGACTGT +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSAIHGL*WFHMDC
Trigger: ACAGTCCATATGAAACCACAAAAGACCATGAATAGC...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGAGTGGCTGCACCATTTaGCATTCCCATCAACAGTAT +
Preference number: 5 (lower is better)
Translates to: SVSQLLHETRSLVKEASKSGCTI*HSHQQY
Trigger: ATACTGTTGATGGGAATGCAAAATGGTGCAGCCACT...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 90 bp ACAAAGCAATCCTTCTGGACTGTAGTGGTCAGGTCCAAGCAAAGCTaGATAATTTTGTTCTTCGTGACTGAGAAATCAGTGATCCCTGTA +
Preference number: 5 (lower is better)
Translates to: TKQSFWTVVVRSKQS*IILFFVTEKSVIPV
Trigger: TACAGGGATCACTGATTTCTCAGTCACGAAGAACAAAATTATCCAGCTTTGCTTGGACCTGACCACTACAGTCCAGAAGGATTGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTAGTTTGCTGATTAACTaGAATGACTTCGTCACCAGC +
Preference number: 5 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVSLLIN*NDFVTS
Trigger: GCTGGTGACGAAGTCATTCAAGTTAATCAGCAAACT...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCAAACTGTGTACAATTTaGAAGAAGTGTACACACCGT +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSKLCTI*KKCTHR
Trigger: ACGGTGTGTACACTTCTTCAAAATTGTACACAGTTT...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAAAACTTGTGGACATATaGTTGCAGGCAGTCATCCAA +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPKLVDI*LQAVIQ
Trigger: TTGGATGACTGCCTGCAACAATATGTCCACAAGTTT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTGTAAAAGCCAAAGCTGGATAATTTaGTTCTTCGTGACTGAGAAA +
Preference number: 5 (lower is better)
Translates to: GPYIILRLKREEAVHCKSQSWII*FFVTEK
Trigger: TTTCTCAGTCACGAAGAACAAAATTATCCAGCTTTG...GCTTTTACAGTGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGTCTGAAATTTCAGGTTaGGTGGGGAAAGAACTGAGA +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSSEISG*VGKELR
Trigger: TCTCAGTTCTTTCCCCACCAAACCTGAAATTTCAGA...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAAAGGGAAAGGAGAGCTaGCTTGCTTCCTTTCTCTCT +
Preference number: 5 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPKGKES*LASFLS
Trigger: AGAGAGAAAGGAAGCAAGCAAGCTCTCCTTTCCCTT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAAGGCGCAGAACAGGATaGAATTTCGCTAAAAAGACA +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPRRRTG*NFAKKT
Trigger: TGTCTTTTTAGCGAAATTCAATCCTGTTCTGCGCCT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACACCAAAGAAGCGTTGTaGATGGCCAAGGCTTATTCT +
Preference number: 5 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNTKEAL*MAKAYS
Trigger: AGAATAAGCCTTGGCCATCAACAACGCTTCTTTGGT...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTTTGTGGGTTGGATTCTTaGTTGCTTATACCTCCAATG +
Preference number: 5 (lower is better)
Translates to: HFPPFVSTSQHLRSSEFVCGLDS*LLIPPM
Trigger: CATTGGAGGTATAAGCAACAAAGAATCCAACCCACA...AACAAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATATAAAGCTGTGTGGGTaGGATTCTTTGTTGCTTATA +
Preference number: 5 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDIKLCG*DSLLLI
Trigger: TATAAGCAACAAAGAATCCAACCCACACAGCTTTAT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCATCGCTCGTTTTTGTGTaGATTTGTCATTCTCTTGCC +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPSLVFV*ICHSLA
Trigger: GGCAAGAGAATGACAAATCAACACAAAAACGAGCGA...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCCATCTGATTCTCTTTaGCAAAATGCCTTTTCGCTC +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSPSDSL*QNAFSL
Trigger: GAGCGAAAAGGCATTTTGCAAAAGAGAATCAGATGG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp GGTTGGTTGAGTATTCACTTTCCTGGGACCCATCTCCCAATTTACCAGGTGGATACCAACATCCTAAACTaGGTCTTTTCACATAAGTGT +
Preference number: 5 (lower is better)
Translates to: GWLSIHFPGTHLPIYQVDTNILN*VFSHKC
Trigger: ACACTTATGTGAAAAGACCAAGTTTAGGATGTTGGT...ATCCACCTGGTAAATTGGGAGATGGGTCCCAGGAAAGTGAATACTCAACCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCAGTTTCACAACTTCTTCATGAAACAAGGAGCTTGGTAAAGGAGGCCAGCAAGCCGTTGTGTCTCTGTTaGGCTCATTTTGAAGTGATA +
Preference number: 5 (lower is better)
Translates to: SVSQLLHETRSLVKEASKPLCLC*AHFEVI
Trigger: TATCACTTCAAAATGAGCCAAACAGAGACACAACGG...CTTGCTGGCCTCCTTTACCAAGCTCCTTGTTTCATGAAGAAGTTGTGAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCTTTGTGGGCAGAATGTaGGTTTCCACCGAGTACCCA +
Preference number: 5 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIFVGRM*VSTEYP
Trigger: TGGGTACTCGGTGGAAACCAACATTCTGCCCACAAA...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACTTCTCTCGTTCAAACTaGTGGACATATTGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNFSRSN*WTYCCR
Trigger: CCTGCAACAATATGTCCACAAGTTTGAACGAGAGAA...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCACTACTTGTTATCTTTTaGCAGTGCAGGATGTGTGGG +
Preference number: 5 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPLLVIF*QCRMCG
Trigger: CCCACACATCCTGCACTGCAAAAAGATAACAAGTAG...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTGTGTACCATTATATGTaGTCTTCTGATGCTTTTTCC +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFVYHYM*SSDAFS
Trigger: GGAAAAAGCATCAGAAGACAACATATAATGGTACAC...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ACCCATTTCCCTCCTTTTGTCTCCACAAGCCAGCACCTAAGATCCTCTGAATTTACTATAGGTGCAATATaGTACCACAAATCTCTAGAG +
Preference number: 5 (lower is better)
Translates to: THFPPFVSTSQHLRSSEFTIGAI*YHKSLE
Trigger: CTCTAGAGATTTGTGGTACAATATTGCACCTATAGT...AAATTCAGAGGATCTTAGGTGCTGGCTTGTGGAGACAAAAGGAGGGAAATGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGTGTACACTGCAGTATaGTTGACTATAGGTGCAATA +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPVYTAV*LTIGAI
Trigger: TATTGCACCTATAGTCAACAATACTGCAGTGTACAC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAGTAGATCGGATTGTTTaGTCACAGATGCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPVDRIV*SQMPFK
Trigger: TTTAAATGGCATCTGTGACAAAACAATCCGATCTAC...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGCAAAGCTGGATAATTTaGTTCTTCGTGACTGAGAAA +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSQSWII*FFVTEK
Trigger: TTTCTCAGTCACGAAGAACAAAATTATCCAGCTTTG...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGATTATACATGAGTGGTaGCTAGTTCCTTTAACCACA +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSIIHEW*LVPLTT
Trigger: TGTGGTTAAAGGAACTAGCAACCACTCATGTATAAT...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCAATGCTCCGATTCCCTTaGTTTTCATATACGATTTCA +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPMLRFP*FSYTIS
Trigger: TGAAATCGTATATGAAAACAAAGGGAATCGGAGCAT...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp AATTGCATAAGGTCCCTACATAATACTGAGGCTGAAACGAGAAGAGGCTGTCCACTCTTGGCTTTGTATTaGTGTAAGAGTTCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: NCIRSLHNTEAETRRGCPLLALY*CKSSFS
Trigger: TGAAAAGGAACTCTTACACAAATACAAAGCCAAGAG...TGGACAGCCTCTTCTCGTTTCAGCCTCAGTATTATGTAGGGACCTTATGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAAATGCCTGGGTCACCTaGAAGTCCAAAATTGGAGAC +
Preference number: 5 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSNAWVT*KSKIGD
Trigger: GTCTCCAATTTTGGACTTCAAGGTGACCCAGGCATT...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGTTAGTTCATGCCATTTaGTGTCACTTTGTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSLVHAI*CHFVSS
Trigger: AGAAGACACAAAGTGACACAAAATGGCATGAACTAA...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAAATCCCTCTCCTTCAATCAAATGTTATACAACTGCAACTGTCCTCCACGTCGGTGATGCCTCTATCTTaGTTCTTCTTTCTCAAGATT +
Preference number: 5 (lower is better)
Translates to: QIPLLQSNVIQLQLSSTSVMPLS*FFFLKI
Trigger: AATCTTGAGAAAGAAGAACAAAGATAGAGGCATCAC...CGACGTGGAGGACAGTTGCAGTTGTATAACATTTGATTGAAGGAGAGGGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TACATTTTCTTTATTCATTTCTCCGCCGATGGACGCTTAGATTGTTTGTGTATCAAAGCACCAATCTGGTaGGCCACTGCCTATAATGAA +
Preference number: 5 (lower is better)
Translates to: YIFFIHFSADGRLDCLCIKAPIW*ATAYNE
Trigger: TTCATTATAGGCAGTGGCCAACCAGATTGGTGCTTT...GATACACAAACAATCTAAGCGTCCATCGGCGGAGAAATGAATAAAGAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp TCTGAATTTGTTCCCATCCAATCCTGCAAACTTCCAAGAAGGGCAGTAGATAACAACATAGAAACGAGTTaGAGGAATACCACTTCAAGA +
Preference number: 5 (lower is better)
Translates to: SEFVPIQSCKLPRRAVDNNIETS*RNTTSR
Trigger: TCTTGAAGTGGTATTCCTCAAACTCGTTTCTATGTT...GTTATCTACTGCCCTTCTTGGAAGTTTGCAGGATTGGATGGGAACAAATTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAATATGGACTGTAGAATaGTTTTGTCCCTGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPIWTVE*FCPCLQ
Trigger: CTGAAGACAGGGACAAAACAATTCTACAGTCCATAT...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp ATAAATTTCTTCTTCCCTTCCTCTCGTCTCTGGACTATACCTTACAGCTTTCCAGTAGATCGGATTGTTTaGTCACAGATGCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: INFFFPSSRLWTIPYSFPVDRIV*SQMPFK
Trigger: TTTAAATGGCATCTGTGACAAAACAATCCGATCTAC...TGGAAAGCTGTAAGGTATAGTCCAGAGACGAGAGGAAGGGAAGAAGAAATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS-3UTR CAA 90 bp CAGGATATATATCTAGGAATGAAACTGCTGAGTCATAGGGTATGTGAATACTCAACTTACTCGAGCTCTTaGGCGGATGAAAAGTTTTGT +
Preference number: 5 (lower is better)
Translates to: QDIYLGMKLLSHRVCEYSTYSSS*ADEKFC
Trigger: ACAAAACTTTTCATCCGCCAAAGAGCTCGAGTAAGT...TGAGTATTCACATACCCTATGACTCAGCAGTTTCATTCCTAGATATATATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 72 bp CCTGCTGGCTCTCCGGGGTCCCCGCTCCGCGTGCGCTaGCGTCCCGGAGCCTTCCCGGCGCAGGTCCCACCT +
Preference number: 6 (lower is better)
Translates to: PAGSPGSPLRVR*RPGAFPAQVPP
Trigger: AGGTGGGACCTGCGCCGGGAAGGCTCCGGGACGCCAGCGCACGCGGAGCGGGGACCCCGGAGAGCCAGCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 72 bp GGCGCGATCGGCTCTCCCTCGGCCGGTCTTCTCGCCTaGTGGCTCTCCGGGGTCCCCGCTCCGCGTGCGCTG +
Preference number: 6 (lower is better)
Translates to: GAIGSPSAGLLA*WLSGVPAPRAL
Trigger: CAGCGCACGCGGAGCGGGGACCCCGGAGAGCCAGCAGGCGAGAAGACCGGCCGAGGGAGAGCCGATCGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 72 bp TCCCGGGCACAGCTGCTGCTCCCGAGCGACGGCAGCTaGAGGCACGCCGGGCTGCGACCCCAGACCCCTGGC +
Preference number: 6 (lower is better)
Translates to: SRAQLLLPSDGS*RHAGLRPQTPG
Trigger: GCCAGGGGTCTGGGGTCGCAGCCCGGCGTGCCTGCAGCTGCCGTCGCTCGGGAGCAGCAGCTGTGCCCGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 72 bp GGCTGCTCCCCTGCGCCCGAGCGACTCCGTCAAGACTaGATGGCCGCGGTCAGCCAGTCGTCCCAGCGCGGC +
Preference number: 6 (lower is better)
Translates to: GCSPAPERLRQD*MAAVSQSSQRG
Trigger: GCCGCGCTGGGACGACTGGCTGACCGCGGCCATGCAGTCTTGACGGAGTCGCTCGGGCGCAGGGGAGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 72 bp GCTCCCCTGCGCCCGAGCGACTCCGTCAAGACTGCATaGCCGCGGTCAGCCAGTCGTCCCAGCGCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: APLRPSDSVKTA*PRSASRPSAAP
Trigger: CGGAGCCGCGCTGGGACGACTGGCTGACCGCGGCCATGCAGTCTTGACGGAGTCGCTCGGGCGCAGGGGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 72 bp CTCCCGTGCCGCCCTGGCAGGGCCGAGCGCAGAGCGTaGGCGCTCGGGTTGCAAAGTTTCAGCTCCGGTTGC +
Preference number: 6 (lower is better)
Translates to: LPCRPGRAERRA*ALGLQSFSSGC
Trigger: GCAACCGGAGCTGAAACTTTGCAACCCGAGCGCGCACGCTCTGCGCTCGGCCCTGCCAGGGCGGCACGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CAA 72 bp GTAAACGGAGCCCGGTCCAGCCACGCCAGCAGGGCCTaGGCGGCGCCGATGAGCTCCACCACCGAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: VNGARSSHASRA*AAPMSSTTEVR
Trigger: CCTGACCTCGGTGGTGGAGCTCATCGGCGCCGCCAAGGCCCTGCTGGCGTGGCTGGACCGGGCTCCGTTTAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS TCA 72 bp GGTCCAGCCACGCCAGCAGGGCCTTGGCGGCGCCGATaGGCTCCACCACCGAGGTCAGGAACTCATTGGGGG +
Preference number: 6 (lower is better)
Translates to: GPATPAGPWRRR*APPPRSGTHWG
Trigger: CCCCCAATGAGTTCCTGACCTCGGTGGTGGAGCTCATCGGCGCCGCCAAGGCCCTGCTGGCGTGGCTGGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS GCA 72 bp TCTCGCTGGGCTGGAGAGTCGCAGATAAAGTGCTGCTaGCTGCGCTCCGGTGCCCCTTCCCGGGAGGGCGCG +
Preference number: 6 (lower is better)
Translates to: SRWAGESQIKCC*LRSGAPSREGA
Trigger: CGCGCCCTCCCGGGAAGGGGCACCGGAGCGCAGGCAGCAGCACTTTATCTGCGACTCTCCAGCCCAGCGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 72 bp GCCTCTCGCTGGGCTGGAGAGTCGCAGATAAAGTGCTaGTGCCTGCGCTCCGGTGCCCCTTCCCGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: ASRWAGESQIKC*CLRSGAPSREG
Trigger: GCCCTCCCGGGAAGGGGCACCGGAGCGCAGGCAGCAGCACTTTATCTGCGACTCTCCAGCCCAGCGAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CAA 90 bp GTGATCCCTGTAAACGGAGCCCGGTCCAGCCACGCCAGCAGGGCCTaGGCGGCGCCGATGAGCTCCACCACCGAGGTCAGGAACTCATTG +
Preference number: 6 (lower is better)
Translates to: VIPVNGARSSHASRA*AAPMSSTTEVRNSL
Trigger: CAATGAGTTCCTGACCTCGGTGGTGGAGCTCATCGGCGCCGCCAAGGCCCTGCTGGCGTGGCTGGACCGGGCTCCGTTTACAGGGATCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS CCA 72 bp CCGCACCCCGGACCAGATGCCGCTCGGTCGTGGGTCTaGAGAACCGGTATGGGGGAGAGGAGCTCTCTTCAA +
Preference number: 6 (lower is better)
Translates to: PHPGPDAARSWV*RTGMGERSSLQ
Trigger: TTGAAGAGAGCTCCTCTCCCCCATACCGGTTCTCCAGACCCACGACCGAGCGGCATCTGGTCCGGGGTGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CCA 72 bp TGTAGTCCGCACCCCGGACCAGATGCCGCTCGGTCGTaGGTCTGGAGAACCGGTATGGGGGAGAGGAGCTCT +
Preference number: 6 (lower is better)
Translates to: CSPHPGPDAARS*VWRTGMGERSS
Trigger: AGAGCTCCTCTCCCCCATACCGGTTCTCCAGACCCACGACCGAGCGGCATCTGGTCCGGGGTGCGGACTACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CAA 72 bp CCTGGCAGGGCCGAGCGCAGAGCGTGCGCGCTCGGGTaGCAAAGTTTCAGCTCCGGTTGCTGCAAACCGAAT +
Preference number: 6 (lower is better)
Translates to: PGRAERRACALG*QSFSSGCCKPN
Trigger: ATTCGGTTTGCAGCAACCGGAGCTGAAACTTTGCAACCCGAGCGCGCACGCTCTGCGCTCGGCCCTGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS TCA 72 bp GAGCCAGGCAGGTGGCCTGAGCAGGGTCCCTCTCAGTaGGTCAACAGTTTGAGGCGCGTAAACCAGCTGACC +
Preference number: 6 (lower is better)
Translates to: EPGRWPEQGPSQ*VNSLRRVNQLT
Trigger: GGTCAGCTGGTTTACGCGCCTCAAACTGTTGACTCACTGAGAGGGACCCTGCTCAGGCCACCTGCCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CCA 72 bp GACGGCTCCCAATGTGCCCCCAGGAACAGACAGCAGTaGGCCAACAAGCTGGCAGTCTTTAGCTCTGGGCCT +
Preference number: 6 (lower is better)
Translates to: DGSQCAPRNRQQ*ANKLAVFSSGP
Trigger: AGGCCCAGAGCTAAAGACTGCCAGCTTGTTGGCCCACTGCTGTCTGTTCCTGGGGGCACATTGGGAGCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000433165.6
ENST00000454664.2
CDS CCA 72 bp GCACAGAGAAGGTCCACAGCCTCCAACACAAGCTCCTaGTGTCCAATCCGTGTGACCCCCAGCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: AQRRSTASNTSS*CPIRVTPSSSR
Trigger: CCTGGAGGAGCTGGGGGTCACACGGATTGGACACCAGGAGCTTGTGTTGGAGGCTGTGGACCTTCTCTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS CCA 72 bp GGGTTCCATGGTAAACCGCTTCGCCTCTCGCTGGGCTaGAGAGTCGCAGATAAAGTGCTGCTGCCTGCGCTC +
Preference number: 6 (lower is better)
Translates to: GFHGKPLRLSLG*RVADKVLLPAL
Trigger: GAGCGCAGGCAGCAGCACTTTATCTGCGACTCTCCAGCCCAGCGAGAGGCGAAGCGGTTTACCATGGAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 72 bp GTCACGGGTTCCATGGTAAACCGCTTCGCCTCTCGCTaGGCTGGAGAGTCGCAGATAAAGTGCTGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: VTGSMVNRFASR*AGESQIKCCCL
Trigger: CAGGCAGCAGCACTTTATCTGCGACTCTCCAGCCCAGCGAGAGGCGAAGCGGTTTACCATGGAACCCGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CAA 90 bp TCATCCAACCCTCTAGTCCAGTCCACCACTTGTTTGGGGCTCCACTaGGTCACGGGTTCCATGGTAAACCGCTTCGCCTCTCGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SSNPLVQSTTCLGLH*VTGSMVNRFASRWA
Trigger: AGCCCAGCGAGAGGCGAAGCGGTTTACCATGGAACCCGTGACCAAGTGGAGCCCCAAACAAGTGGTGGACTGGACTAGAGGGTTGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 72 bp CAGATGCCGCTCGGTCGTGGGTCTGGAGAACCGGTATaGGGGAGAGGAGCTCTCTTCAATGATCGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: QMPLGRGSGEPV*GRGALFNDRRN
Trigger: ATTCCTCCGATCATTGAAGAGAGCTCCTCTCCCCCATACCGGTTCTCCAGACCCACGACCGAGCGGCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS GCA 72 bp AGGTCAGGAACTCATTGGGGGCCTTGCGGGAGGTGTTaGCATCGTAAGCGGGACTTTTCCGTCGGCTACTTA +
Preference number: 6 (lower is better)
Translates to: RSGTHWGPCGRC*HRKRDFSVGYL
Trigger: TAAGTAGCCGACGGAAAAGTCCCGCTTACGATGGCAACACCTCCCGCAAGGCCCCCAATGAGTTCCTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS CAA 72 bp GATCCTCCAAGGCTCCCCAGAAGCTTCTCCTCCTTTTaGAGGCCTTCTCTGGACACCAACCACGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: DPPRLPRSFSSF*RPSLDTNHAPA
Trigger: AGCTGGTGCGTGGTTGGTGTCCAGAGAAGGCCTCAAAAAGGAGGAGAAGCTTCTGGGGAGCCTTGGAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CAA 72 bp CCTCTAGTCCAGTCCACCACTTGTTTGGGGCTCCACTaGGTCACGGGTTCCATGGTAAACCGCTTCGCCTCT +
Preference number: 6 (lower is better)
Translates to: PLVQSTTCLGLH*VTGSMVNRFAS
Trigger: AGAGGCGAAGCGGTTTACCATGGAACCCGTGACCAAGTGGAGCCCCAAACAAGTGGTGGACTGGACTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS TCA 72 bp CCGAGTACCCAGGCAACTGATCCGAGTCTGCAATGGTaGATCTTCGTCTCCGGCTTTCCTGGTCCAAGAAGG +
Preference number: 6 (lower is better)
Translates to: PSTQATDPSLQW*IFVSGFPGPRR
Trigger: CCTTCTTGGACCAGGAAAGCCGGAGACGAAGATTCACCATTGCAGACTCGGATCAGTTGCCTGGGTACTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424998.3
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS TCA 72 bp CAGGAGGGACGGTTCTGTGGACGAGGACTTCGTAGCTaGGGAGCCAGATTTCTTTTTGGTCCCTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: QEGRFCGRGLRS*GARFLFGPFLL
Trigger: CAGGAGGAAGGGACCAAAAAGAAATCTGGCTCCTCAGCTACGAAGTCCTCGTCCACAGAACCGTCCCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS TCA 72 bp ATCCTCCAAGGCTCCCCAGAAGCTTCTCCTCCTTTTTaGGGCCTTCTCTGGACACCAACCACGCACCAGCTT +
Preference number: 6 (lower is better)
Translates to: ILQGSPEASPPF*GLLWTPTTHQL
Trigger: AAGCTGGTGCGTGGTTGGTGTCCAGAGAAGGCCTCAAAAAGGAGGAGAAGCTTCTGGGGAGCCTTGGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS GCA 72 bp GGTTTCCACCGAGTACCCAGGCAACTGATCCGAGTCTaGAATGGTGAATCTTCGTCTCCGGCTTTCCTGGTC +
Preference number: 6 (lower is better)
Translates to: GFHRVPRQLIRV*NGESSSPAFLV
Trigger: GACCAGGAAAGCCGGAGACGAAGATTCACCATTGCAGACTCGGATCAGTTGCCTGGGTACTCGGTGGAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424998.3
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CAA 90 bp GGTTCTGTGGACGAGGACTTCGTAGCTGAGGAGCCAGATTTCTTTTaGGTCCCTTCCTCCTGGAATGGAATCGTGGCGCTGCTGTGGAGA +
Preference number: 6 (lower is better)
Translates to: GSVDEDFVAEEPDFF*VPSSWNGIVALLWR
Trigger: TCTCCACAGCAGCGCCACGATTCCATTCCAGGAGGAAGGGACCAAAAAGAAATCTGGCTCCTCAGCTACGAAGTCCTCGTCCACAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CCA 72 bp TGGACATATTGTTGCAGGCAGTCATCCAACCCTATCTaGTCTGGCCAACTCCTCCTGATCCTCCAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: WTYCCRQSSNPI*SGQLLLILQGS
Trigger: GGAGCCTTGGAGGATCAGGAGGAGTTGGCCAGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CAA 72 bp GACGAGGACTTCGTAGCTGAGGAGCCAGATTTCTTTTaGGTCCCTTCCTCCTGGAATGGAATCGTGGCGCTG +
Preference number: 6 (lower is better)
Translates to: DEDFVAEEPDFF*VPSSWNGIVAL
Trigger: CAGCGCCACGATTCCATTCCAGGAGGAAGGGACCAAAAAGAAATCTGGCTCCTCAGCTACGAAGTCCTCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CAA 90 bp CTGCTCGCCGTTGATCTTCTCTCGTTCAAACTTGTGGACATATTGTaGCAGGCAGTCATCCAACCCTATCTGGTCTGGCCAACTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LLAVDLLSFKLVDIL*QAVIQPYLVWPTPP
Trigger: AGGAGGAGTTGGCCAGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CAA 90 bp CAGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTTGTGGACATATaGTTGCAGGCAGTCATCCAACCCTATCTGGTCTGGCCAACTCCT +
Preference number: 6 (lower is better)
Translates to: QLLAVDLLSFKLVDI*LQAVIQPYLVWPTP
Trigger: AGGAGTTGGCCAGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CAA 90 bp CAGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTTGTGGACATATaGTTGCAGGCAGTCATCCAACCCTCTAGTCCAGTCCACCACTTG +
Preference number: 6 (lower is better)
Translates to: QLLAVDLLSFKLVDI*LQAVIQPSSPVHHL
Trigger: CAAGTGGTGGACTGGACTAGAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CCA 72 bp GAGTCTGCAATGGTGAATCTTCGTCTCCGGCTTTCCTaGTCCAAGAAGGAATTCGGGGACTCTGAACCCTTA +
Preference number: 6 (lower is better)
Translates to: ESAMVNLRLRLS*SKKEFGDSEPL
Trigger: TAAGGGTTCAGAGTCCCCGAATTCCTTCTTGGACCAGGAAAGCCGGAGACGAAGATTCACCATTGCAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424998.3
ENST00000433165.6
ENST00000479339.5
ENST00000607772.6
CDS CAA 90 bp GAAATCTGCAGCAGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTaGTGGACATATTGTTGCAGGCAGTCATCCAACCCTCTAGTCCAG +
Preference number: 6 (lower is better)
Translates to: EICSSCSPLIFSRSN*WTYCCRQSSNPLVQ
Trigger: CTGGACTAGAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGCTGCAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CAA 72 bp AGCAGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTaGTGGACATATTGTTGCAGGCAGTCATCCAACCCT +
Preference number: 6 (lower is better)
Translates to: SSCSPLIFSRSN*WTYCCRQSSNP
Trigger: AGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS CAA 90 bp GAAATCTGCAGCAGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTaGTGGACATATTGTTGCAGGCAGTCATCCAACCCTATCTGGTCT +
Preference number: 6 (lower is better)
Translates to: EICSSCSPLIFSRSN*WTYCCRQSSNPIWS
Trigger: AGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGCTGCAGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS TCA 72 bp GGTCCTGATGGGAAATCTGCAGCAGCTGCTCGCCGTTaGTCTTCTCTCGTTCAAACTTGTGGACATATTGTT +
Preference number: 6 (lower is better)
Translates to: GPDGKSAAAARR*SSLVQTCGHIV
Trigger: AACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCTGCTGCAGATTTCCCATCAGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS CCA 72 bp AGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTTGTaGACATATTGTTGCAGGCAGTCATCCAACCCTATC +
Preference number: 6 (lower is better)
Translates to: SCSPLIFSRSNL*TYCCRQSSNPI
Trigger: GATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CCA 72 bp AGCTGCTCGCCGTTGATCTTCTCTCGTTCAAACTTGTaGACATATTGTTGCAGGCAGTCATCCAACCCTCTA +
Preference number: 6 (lower is better)
Translates to: SCSPLIFSRSNL*TYCCRQSSNPL
Trigger: TAGAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGCGAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CAA 72 bp GCCGTTGATCTTCTCTCGTTCAAACTTGTGGACATATaGTTGCAGGCAGTCATCCAACCCTATCTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: AVDLLSFKLVDI*LQAVIQPYLVW
Trigger: CCAGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CAA 72 bp GCCGTTGATCTTCTCTCGTTCAAACTTGTGGACATATaGTTGCAGGCAGTCATCCAACCCTCTAGTCCAGTC +
Preference number: 6 (lower is better)
Translates to: AVDLLSFKLVDI*LQAVIQPSSPV
Trigger: GACTGGACTAGAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CAA 90 bp TCCTTCTGGACTGTAGTGGTCAGGTCCAAGCAAAGCTGGATAATTTaGTTCTTCGTGACTGAGAAATCAGTGATCCCTGTAAACGGAGCC +
Preference number: 6 (lower is better)
Translates to: SFWTVVVRSKQSWII*FFVTEKSVIPVNGA
Trigger: GGCTCCGTTTACAGGGATCACTGATTTCTCAGTCACGAAGAACAAAATTATCCAGCTTTGCTTGGACCTGACCACTACAGTCCAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS TCA 72 bp GTCCAAGCAAAGCTGGATAATTTTGTTCTTCGTGACTaGGAAATCAGTGATCCCTGTAAACGGAGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: VQAKLDNFVLRD*EISDPCKRSPV
Trigger: GACCGGGCTCCGTTTACAGGGATCACTGATTTCTCAGTCACGAAGAACAAAATTATCCAGCTTTGCTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS GCA 72 bp TTGATCTTCTCTCGTTCAAACTTGTGGACATATTGTTaGAGGCAGTCATCCAACCCTCTAGTCCAGTCCACC +
Preference number: 6 (lower is better)
Translates to: LIFSRSNLWTYC*RQSSNPLVQST
Trigger: GGTGGACTGGACTAGAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS CAA 72 bp GTTGATCTTCTCTCGTTCAAACTTGTGGACATATTGTaGCAGGCAGTCATCCAACCCTATCTGGTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: VDLLSFKLVDIL*QAVIQPYLVWP
Trigger: TGGCCAGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CAA 72 bp GTTGATCTTCTCTCGTTCAAACTTGTGGACATATTGTaGCAGGCAGTCATCCAACCCTCTAGTCCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: VDLLSFKLVDIL*QAVIQPSSPVH
Trigger: GTGGACTGGACTAGAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607772.6
CDS GCA 72 bp TTGATCTTCTCTCGTTCAAACTTGTGGACATATTGTTaGAGGCAGTCATCCAACCCTATCTGGTCTGGCCAA +
Preference number: 6 (lower is better)
Translates to: LIFSRSNLWTYC*RQSSNPIWSGQ
Trigger: TTGGCCAGACCAGATAGGGTTGGATGACTGCCTGCAACAATATGTCCACAAGTTTGAACGAGAGAAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479339.5
CDS CCA 72 bp TCCTTCTGGACTGTAGTGGTCAGGTCCAAGCAAAGCTaGATAATTTTGTTCTTCGTGACTGAGAAATCAGTG +
Preference number: 6 (lower is better)
Translates to: SFWTVVVRSKQS*IILFFVTEKSV
Trigger: CACTGATTTCTCAGTCACGAAGAACAAAATTATCCAGCTTTGCTTGGACCTGACCACTACAGTCCAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS CAA 72 bp TTTCAGCTGCCATCCCACCACAGTTTGCTGATTAACTaGAATGACTTCGTCACCAGCATGAATCTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: FQLPSHHSLLIN*NDFVTSMNLLR
Trigger: TCTCAGAAGATTCATGCTGGTGACGAAGTCATTCAAGTTAATCAGCAAACTGTGGTGGGATGGCAGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000433165.6
ENST00000454664.2
ENST00000479339.5
ENST00000607772.6
CDS CAA 72 bp ACTGTAGTGGTCAGGTCCAAGCAAAGCTGGATAATTTaGTTCTTCGTGACTGAGAAATCAGTGATCCCTGTA +
Preference number: 6 (lower is better)
Translates to: TVVVRSKQSWII*FFVTEKSVIPV
Trigger: TACAGGGATCACTGATTTCTCAGTCACGAAGAACAAAATTATCCAGCTTTGCTTGGACCTGACCACTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479339.5
ENST00000607772.6
CDS TCA 72 bp GGGCCTGCCTATAAGAATAGCTTTCAAATAAGGGCTTaGGTAAACTCAGCCACAAAAGTTTATTTTAAGCAC +
Preference number: 6 (lower is better)
Translates to: GPAYKNSFQIRA*VNSATKVYFKH
Trigger: GTGCTTAAAATAAACTTTTGTGGCTGAGTTTACTCAAGCCCTTATTTGAAAGCTATTCTTATAGGCAGGCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433165.6
ENST00000454664.2