Pregenerated sensors for CMC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000187118Ensembl transcript IDs: ENST00000334841.10, ENST00000418849.2, ENST00000423894.5, ENST00000466830.6, ENST00000468330.1, ENST00000469102.1, ENST00000477739.1
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGTCTGTGATTAATGGAATTGGTGTCAGATGCTGGAATTTATTCTaGCCAATGAACACAGCTGACTCAGGGGAGTACAATCTCCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LSVINGIGVRCWNLF*PMNTADSGEYNLLP Trigger: TGGCAGGAGATTGTACTCCCCTGAGTCAGCTGTGTTCATTGGTCAGAATAAATTCCAGCATCTGACACCAATTCCATTAATCACAGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR GCA 90 bp | CCAATACCAAAGGTCAATGTGGAAATATGGGCATGTTTGCCCCTATaGTGTGTGGTCTCTAGATTTCTATATTTGCTTTGCTTTTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: PIPKVNVEIWACLPL*CVVSRFLYLLCFCL Trigger: CAGACAAAAGCAAAGCAAATATAGAAATCTAGAGACCACACAGCATAGGGGCAAACATGCCCATATTTCCACATTGACCTTTGGTATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR GCA 90 bp | GAAATGCACCAATACCAAAGGTCAATGTGGAAATATGGGCATGTTTaGCCCTATGCTGTGTGGTCTCTAGATTTCTATATTTGCTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: EMHQYQRSMWKYGHV*PYAVWSLDFYICFA Trigger: AGCAAAGCAAATATAGAAATCTAGAGACCACACAGCATAGGGGCAAACATGCCCATATTTCCACATTGACCTTTGGTATTGGTGCATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR TCA 90 bp | ACTACTACTAACAGTAACTACCAATATAAGAGCATGTACCAGGTCTaGAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAAT | + |
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Preference number: 1 (lower is better) Translates to: TTTNSNYQYKSMYQV*STVLYTVRVPAICN Trigger: ATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGTACATGCTCTTATATTGGTAGTTACTGTTAGTAGTAGT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR GCA 90 bp | TTTCATTTATCTCTAAAAACAGTTAACTTCCTGTGCTCTAGGAAATaGACCAATACCAAAGGTCAATGTGGAAATATGGGCATGTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: FHLSLKTVNFLCSRK*TNTKGQCGNMGMFA Trigger: GGCAAACATGCCCATATTTCCACATTGACCTTTGGTATTGGTGCATTTCCTAGAGCACAGGAAGTTAACTGTTTTTAGAGATAAATGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR TCA 90 bp | TCAGGAGCAGCTAAGAGACAAATATCTAAAGTCACAGTAAATTGCTaGTCCAGGATTAAAACTCAGATCATCTGTCATTTATCTCCTAGT | + |
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Preference number: 1 (lower is better) Translates to: SGAAKRQISKVTVNC*SRIKTQIICHLSPS Trigger: ACTAGGAGATAAATGACAGATGATCTGAGTTTTAATCCTGGATCAGCAATTTACTGTGACTTTAGATATTTGTCTCTTAGCTGCTCCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR CAA 90 bp | GGAAATGCACCAATACCAAAGGTCAATGTGGAAATATGGGCATGTTaGCCCCTATGCTGTGTGGTCTCTAGATTTCTATATTTGCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: GNAPIPKVNVEIWAC*PLCCVVSRFLYLLC Trigger: GCAAAGCAAATATAGAAATCTAGAGACCACACAGCATAGGGGCAAACATGCCCATATTTCCACATTGACCTTTGGTATTGGTGCATTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR TCA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAATCAAAAGGTCCAGAATaGCCAGGAAAACCATATCCC | + |
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Preference number: 2 (lower is better) Translates to: SYTLYVYLLYAILSTSSQSKGPE*PGKPYP Trigger: GGGATATGGTTTTCCTGGTCATTCTGGACCTTTTGA...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR TCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCAGGCTGGAGCCCTCGTaGATGGATTTATGCCATTAT | + |
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Preference number: 2 (lower is better) Translates to: SSCVGNLVANLTGLRNGARLEPS*MDLCHY Trigger: ATAATGGCATAAATCCATTCACGAGGGCTCCAGCCT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAGCATGTTTGCCCCTATaGTGTGTGGTCTCTAGATTT | + |
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Preference number: 2 (lower is better) Translates to: QGLGCIDIVDHEMSTLILACLPL*CVVSRF Trigger: AAATCTAGAGACCACACAGCATAGGGGCAAACATGC...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAAAATATGGGCATGTTTaGCCCTATGCTGTGTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: QGLGCIDIVDHEMSTLILKYGHV*PYAVWS Trigger: AGACCACACAGCATAGGGGCAAACATGCCCATATTT...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR TCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCAGCATGTACCAGGTCTaGAGCACTGTCTTATACACT | + |
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Preference number: 2 (lower is better) Translates to: SSCVGNLVANLTGLRNGASMYQV*STVLYT Trigger: AGTGTATAAGACAGTGCTTCAGACCTGGTACATGCT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAGGGAAAATTCAGACTTaGAGAGCTGAATCATGTGAC | + |
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Preference number: 2 (lower is better) Translates to: QGLGCIDIVDHEMSTLILGKIQT*RAESCD Trigger: GTCACATGATTCAGCTCTTCAAGTCTGAATTTTCCC...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAGCCATTCTGCTATACTaGCTAGTTATTATTAACACC | + |
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Preference number: 2 (lower is better) Translates to: TRSEALSYTLYVYLLYAIAILLY*LVIINT Trigger: GGTGTTAATAATAACTAGGCAGTATAGCAGAATGGC...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR GCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTACCCTTGCCAGAAGCTaGTGGCAAATAAACTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LDFYICFAFVCSSNLPPFTLARS*WQINSR Trigger: TCTGGAGTTTATTTGCCAGCAGCTTCTGGCAAGGGT...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR CCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCCTTGCCAGAAGCTGCTaGCAAATAAACTCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: SSCVGNLVANLTGLRNGALARSC*QINSRT Trigger: AGTTCTGGAGTTTATTTGCCAGCAGCTTCTGGCAAG...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR GCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCAAGGTTGTCCATTCCTaGTTTTCTTTAGTTTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSCVGNLVANLTGLRNGAKVVHS*FSLVLA Trigger: AGCCAAAACTAAAGAAAAGCAGGAATGGACAACCTT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR GCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTCACTGTACGTGTACCTaGTATATGCAATACTCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LDFYICFAFVCSSNLPPFHCTCT*YMQYSV Trigger: TACTGAGTATTGCATATAGCAGGTACACGTACAGTG...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR GCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTGCTGTTATAAAAGTTTaGCCACACTTGTTTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: LDFYICFAFVCSSNLPPFAVIKV*PHLFVL Trigger: AAGGACAAACAAGTGTGGGCAAACTTTTATAACAGC...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR TCA 72 bp | GAATTGGTGTCAGATGCTGGAATTTATTCTGACCAATaGACACAGCTGACTCAGGGGAGTACAATCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: ELVSDAGIYSDQ*TQLTQGSTISC Trigger: GCAGGAGATTGTACTCCCCTGAGTCAGCTGTGTTCATTGGTCAGAATAAATTCCAGCATCTGACACCAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR CCA 72 bp | GGAAATGCACCAATACCAAAGGTCAATGTGGAAATATaGGCATGTTTGCCCCTATGCTGTGTGGTCTCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GNAPIPKVNVEI*ACLPLCCVVSR Trigger: TCTAGAGACCACACAGCATAGGGGCAAACATGCCCATATTTCCACATTGACCTTTGGTATTGGTGCATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR GCA 72 bp | GGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTaGTATATGCAATACTCAGTACATCCTCACAAACTG | + |
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Preference number: 3 (lower is better) Translates to: GLKHCLIHCTCT*YMQYSVHPHKL Trigger: CAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR TCA 72 bp | AACAGTAACTACCAATATAAGAGCATGTACCAGGTCTaGAGCACTGTCTTATACACTGTACGTGTACCTGCT | + |
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Preference number: 3 (lower is better) Translates to: NSNYQYKSMYQV*STVLYTVRVPA Trigger: AGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGTACATGCTCTTATATTGGTAGTTACTGTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR GCA 72 bp | ACACCCTATTATGTTTTGATGCAGTATGAAAACCCTTaGCAGAAGCTGCTGGCAAATAAACTCCAGAACTGT | + |
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Preference number: 3 (lower is better) Translates to: TPYYVLMQYENP*QKLLANKLQNC Trigger: ACAGTTCTGGAGTTTATTTGCCAGCAGCTTCTGGCAAGGGTTTTCATACTGCATCAAAACATAATAGGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR GCA 72 bp | AAGGTCAATGTGGAAATATGGGCATGTTTGCCCCTATaGTGTGTGGTCTCTAGATTTCTATATTTGCTTTGC | + |
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Preference number: 3 (lower is better) Translates to: KVNVEIWACLPL*CVVSRFLYLLC Trigger: GCAAAGCAAATATAGAAATCTAGAGACCACACAGCATAGGGGCAAACATGCCCATATTTCCACATTGACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR CAA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAAGGGTGGAGATTTACTaGGTTCATACACCTTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: QGLGCIDIVDHEMSTLILRVEIY*VHTPFA Trigger: GGCAAAAGGTGTATGAACCAAGTAAATCTCCACCCT...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR GCA 72 bp | AGCACTGTCTTATACACTGTACGTGTACCTGCTATATaGAATACTCAGTACATCCTCACAAACTGTATTAGA | + |
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Preference number: 3 (lower is better) Translates to: STVLYTVRVPAI*NTQYILTNCIR Trigger: TCTAATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR-3UTR CAA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCACACCCTATTATGTTTaGATGCAGTATGAAAACCCT | + |
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Preference number: 3 (lower is better) Translates to: SSCVGNLVANLTGLRNGATPYYV*MQYENP Trigger: AGGGTTTTCATACTGCATCAAAACATAATAGGGTGT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| 3UTR GCA 72 bp | CATTTTCATTTATCTCTAAAAACAGTTAACTTCCTGTaGTCTAGGAAATGCACCAATACCAAAGGTCAATGT | + |
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Preference number: 3 (lower is better) Translates to: HFHLSLKTVNFL*SRKCTNTKGQC Trigger: ACATTGACCTTTGGTATTGGTGCATTTCCTAGAGCACAGGAAGTTAACTGTTTTTAGAGATAAATGAAAATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR GCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTGGGCTCGGACGCACGTaGGACCCCCGGGAGCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFGLGRT*DPRELP Trigger: GGGAAGCTCCCGGGGGTCGCACGTGCGTCCGAGCCC...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTATGGAGGGGAGGGGCTTaGGCTCGGACGCACGTGCGA | + |
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Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILWRGGA*ARTHVR Trigger: TCGCACGTGCGTCCGAGCCCAAGCCCCTCCCCTCCA...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCAAGAACGTAGCCGCTTaGCGGCTCCGGGGCACGCAG | + |
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Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGAKNVAA*RLRGTQ Trigger: CTGCGTGCCCCGGAGCCGCCAAGCGGCTACGTTCTT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR GCA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAGAAACACGGGCCCTTTaGAAAGCACCGCCAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: SYTLYVYLLYAILSTSSQETRAL*KAPPGP Trigger: GGGTCCTGGCGGTGCTTTGCAAAGGGCCCGTGTTTC...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATACCCTGTAGGATGCAGTaGAGACCTTGGAAGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAIPCRMQ*RPWKRQ Trigger: CTGTCTCTTCCAAGGTCTTCACTGCATCCTACAGGG...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR GCA 90 bp | ACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTGTATTTCGACATGTCTGAGATaGTGGTCTGCGGGGTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: TVRVPAICNTQYILTNCISTCLR*WSAGSS Trigger: GCTCGACCCCGCAGACCAGCATCTCAGACATGTCGA...AATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCACATGTCTGAGATGCTaGTCTGCGGGGTCGAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGATCLRC*SAGSSA Trigger: GGCGCTCGACCCCGCAGACCAGCATCTCAGACATGT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTACTTTTTCGACATGTCTaGGATGCTGGTCTGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILLFRHV*DAGLRG Trigger: ACCCCGCAGACCAGCATCTCAGACATGTCGAAAAAG...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAACCAATGAACACAGCTaGCTCAGGGGAGTACAATCT | + |
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Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAITNEHS*LRGVQS Trigger: AGATTGTACTCCCCTGAGTCAGCTGTGTTCATTGGT...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR GCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAGAGACTACAGCTAGCTaGACATTGTGTAGAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAIETTAS*TLCRAA Trigger: AGCTGCTCTACACAATGTGCAGCTAGCTGTAGTCTC...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAGTCCCCACTGACATGTaGACAGTCTGCAATCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SYTLYVYLLYAILSTSSQVPTDM*TVCNPS Trigger: AGAAGGATTGCAGACTGTTCACATGTCAGTGGGGAC...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | ACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTGTATTTGTCTCAGTCCCCACTaGCATGTGAACAGTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: TVRVPAICNTQYILTNCICLSPH*HVNSLQ Trigger: TTGCAGACTGTTCACATGTCAGTGGGGACTGAGACA...AATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR GCA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAATGTGCCCCTGTAGGATaGAGTGAAGACCTTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SYTLYVYLLYAILSTSSQCAPVG*SEDLGR Trigger: TCTTCCAAGGTCTTCACTGCATCCTACAGGGGCACA...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAGTCAATGTGGAAATATaGGCATGTTTGCCCCTATGC | + |
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Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAIVNVEI*ACLPLC Trigger: GCATAGGGGCAAACATGCCCATATTTCCACATTGAC...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAAGACTTGAAACAACCTaGTCACTGAAGCCAACTTTG | + |
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Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAIRLETT*SLKPTL Trigger: CAAAGTTGGCTTCAGTGATCAGGTTGTTTCAAGTCT...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTATCAAAAGGTCCAGAATaGCCAGGAAAACCATATCCC | + |
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Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILSKGPE*PGKPYP Trigger: GGGATATGGTTTTCCTGGTCATTCTGGACCTTTTGA...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAAGCATGTACCAGGTCTaGAGCACTGTCTTATACACT | + |
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Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILSMYQV*STVLYT Trigger: AGTGTATAAGACAGTGCTTCAGACCTGGTACATGCT...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR TCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTACTCCAGGCTTTAGCTaGAGGAAGCAACTACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFTPGFS*RKQLPV Trigger: CACAGGTAGTTGCTTCCTTCAGCTAAAGCCTGGAGT...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR TCA 90 bp | ACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTGTATTATTTATTCTGACCAATaGACACAGCTGACTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TVRVPAICNTQYILTNCIIYSDQ*TQLTQG Trigger: CCCCTGAGTCAGCTGTGTTCATTGGTCAGAATAAAT...AATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATATGTCATTTGAGTATCTaGCTACATGCTTGTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAICHLSI*LHACWK Trigger: CTTCCAACAAGCATGTAGGCAGATACTCAAATGACA...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATACACTGTACGTGTACCTaGTATATGCAATACTCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAIHCTCT*YMQYSV Trigger: TACTGAGTATTGCATATAGCAGGTACACGTACAGTG...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAGCATGTTTGCCCCTATaGTGTGTGGTCTCTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: SYTLYVYLLYAILSTSSQACLPL*CVVSRF Trigger: AAATCTAGAGACCACACAGCATAGGGGCAAACATGC...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTACTTGCCAGAAGCTGCTaGCAAATAAACTCCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILLARSC*QINSRT Trigger: AGTTCTGGAGTTTATTTGCCAGCAGCTTCTGGCAAG...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAACCTCCTTTTGATCTGTaGCCTGGGAAAATGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYTLYVYLLYAILSTSSQPPFDL*PGKMWF Trigger: AAACCACATTTTCCCAGGCCACAGATCAAAAGGAGG...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR TCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTAGGCTGGAGCCCTCGTaGATGGATTTATGCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFRLEPS*MDLCHY Trigger: ATAATGGCATAAATCCATTCACGAGGGCTCCAGCCT...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR TCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTAAACAACCTGATCACTaGAGCCAACTTTGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFKQPDH*SQLCPS Trigger: GCTGGGACAAAGTTGGCTTCAGTGATCAGGTTGTTT...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTACGTGTACCTGCTATATaGAATACTCAGTACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILRVPAI*NTQYIL Trigger: GAGGATGTACTGAGTATTGCATATAGCAGGTACACG...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAGCTGTTATAAAAGTTTaGCCACACTTGTTTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAIAVIKV*PHLFVL Trigger: AAGGACAAACAAGTGTGGGCAAACTTTTATAACAGC...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTACCTTATCTATGGTTCTaGTATGGTTTGATGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILPYLWF*YGLMCP Trigger: GGGACACATCAAACCATAGCAGAACCATAGATAAGG...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCAAATATGGGCATGTTTaGCCCTATGCTGTGTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGAKYGHV*PYAVWS Trigger: AGACCACACAGCATAGGGGCAAACATGCCCATATTT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | ACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTGTATTCTGTGCTCTAGGAAATaGACCAATACCAAAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TVRVPAICNTQYILTNCILCSRK*TNTKGQ Trigger: TTGACCTTTGGTATTGGTGCATTTCCTAGAGCACAG...AATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAATACTAGCTGAAACTTaGTCTAAAGAGCTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAIILAET*SKELPL Trigger: CAAAGGAAGCTCTTTAGAGCAAGTTTCAGCTAGTAT...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAGGGAGTACAATCTCCTaGCAAGTAATAGAACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILGSTIS*QVIEPN Trigger: GTTTGGTTCTATTACTTGGCAGGAGATTGTACTCCC...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATACTAAAACTAAAACTTTaGCTTTACCCAACCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRSEALSYTLYVYLLYAILKLKL*LYPTFH Trigger: GTGGAAGGTTGGGTAAAGGCAAAGTTTTAGTTTTAG...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCTCTATGGTTCTGCTATaGTTTGATGTGTCCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGASMVLL*FDVSPK Trigger: CTTGGGGGACACATCAAACCATAGCAGAACCATAGA...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR TCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCGGGAAAATTCAGACTTaGAGAGCTGAATCATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGAGKIQT*RAESCD Trigger: GTCACATGATTCAGCTCTTCAAGTCTGAATTTTCCC...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR TCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTATTCACGATTTCACCATaGGGACACTTATCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILFTISP*GHLSLS Trigger: TGAAAGAGATAAGTGTCCTCATGGTGAAATCGTGAA...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTCAGTATGAAAACCCTTaGCAGAAGCTGCTGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFQYENP*QKLLAN Trigger: ATTTGCCAGCAGCTTCTGGCAAGGGTTTTCATACTG...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | ACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTGTATTTGGAGCCCTCGTGAATaGATTTATGCCATTATTACA | + |
|
Preference number: 4 (lower is better) Translates to: TVRVPAICNTQYILTNCIWSPRE*IYAIIT Trigger: TGTAATAATGGCATAAATCCATTCACGAGGGCTCCA...AATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAACTGTGTAATCTAATCTaGCTTCTATGGGGAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYTLYVYLLYAILSTSSQLCNLI*LLWGKQ Trigger: TTGCTTTCCCCATAGAAGCCAGATTAGATTACACAG...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTATTCAGAAAGGCTACTTaGAGAAGGTGTATCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILFRKAT*RRCILR Trigger: CCTTAAGATACACCTTCTCCAAGTAGCCTTTCTGAA...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCCTTTTGGACTGCCTGTaGACAAAGAGTTTGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGALLDCL*TKSLSK Trigger: TTTGCTCAAACTCTTTGTCCACAGGCAGTCCAAAAG...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| 3UTR CAA 72 bp | GTCATTTTCTTCAAAGAGACTACAGCTAGCTGCACATaGTGTAGAGCAGCTTCTAAATTGTTAGACTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VIFFKETTASCT*CRAASKLLDFV Trigger: CACAAAGTCTAACAATTTAGAAGCTGCTCTACACAATGTGCAGCTAGCTGTAGTCTCTTTGAAGAAAATGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAAAGGTTGTCCATTCCTaGTTTTCTTTAGTTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILKVVHS*FSLVLA Trigger: AGCCAAAACTAAAGAAAAGCAGGAATGGACAACCTT...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAGCCATTCTGCTATACTaGCTAGTTATTATTAACACC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGCIDIVDHEMSTLILAILLY*LVIINT Trigger: GGTGTTAATAATAACTAGGCAGTATAGCAGAATGGC...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTTGCTTTGCTTTTGTCTaGTCTAGTAATCTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFCFAFV*SSNLPP Trigger: AGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCA...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCAATTTGCTTTTGGACTaGCTGTGGACAAAGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGANLLLD*LWTKSL Trigger: CAAACTCTTTGTCCACAGGCAGTCCAAAAGCAAATT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCTACCAAAGGTCAATGTaGAAATATGGGCATGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGAYQRSM*KYGHVC Trigger: GCAAACATGCCCATATTTCCACATTGACCTTTGGTA...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTCCCTCTCTTACCAAATaGCAAAGCTCTTTGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFPSLTK*QSSLSY Trigger: GTATGACAAAGAGCTTTGCCATTTGGTAAGAGAGGG...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTACAGTTAACTTCCTGTaGTCTAGGAAATGCACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFTVNFL*SRKCTN Trigger: ATTGGTGCATTTCCTAGAGCACAGGAAGTTAACTGT...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTCTAATCTGGCTTCTATaGGGAAAGCAACATGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFLIWLL*GKQHVH Trigger: ATGTACATGTTGCTTTCCCCATAGAAGCCAGATTAG...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTATGGCAGAAATTCTCTaGAAGACAATTCCTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFMAEIL*KTIPGY Trigger: ATACCCAGGAATTGTCTTCCAGAGAATTTCTGCCAT...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR TCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTGAACAAATGGCAATGTaGGTAGGTTACATTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFEQMAM*VGYISV Trigger: AACAGAAATGTAACCTACTCACATTGCCATTTGTTC...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR TCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTCTTTTAAAAGCTCTATaGCATAGTTGGGACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFLLKAL*HSWDRN Trigger: ATTCCTGTCCCAACTATGTCATAGAGCTTTTAAAAG...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTATCTCTCAGATCTATTaGATGGGATTAGGGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDFYICFAFVCSSNLPPFISQIY*MGLGKV Trigger: AACTTTCCCTAATCCCATGCAATAGATCTGAGAGAT...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCATTCTATATCCATTCTaGAGACAAGGAAAGAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSCVGNLVANLTGLRNGAILYPF*RQGKRH Trigger: ATGTCTCTTTCCTTGTCTGCAGAATGGATATAGAAT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CAA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAGTGGAGGGGAGGGGCTaGGGCTCGGACGCACGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SYTLYVYLLYAILSTSSQVEGRG*GSDARA Trigger: CGCACGTGCGTCCGAGCCCAAGCCCCTCCCCTCCAC...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS GCA 90 bp | CTGAACCCAGGTTGCCCTCTCTGCAGTCTATACTCCTGTCTACTCTaGTCTAGAGCTCCCCCAACTGGAGTGAAGGATAATATGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LNPGCPLCSLYSCLL*SRAPPTGVKDNMSN Trigger: GTTTGACATATTATCCTTCACTCCAGTTGGGGGAGCTCTAGAGCAGAGTAGACAGGAGTATAGACTGCAGAGAGGGCAACCTGGGTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477739.1 |
||
| CDS-3UTR CAA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAAGAAACACGGGCCCTTaGCAAAGCACCGCCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TRSEALSYTLYVYLLYAIRNTGP*QSTART Trigger: GGTCCTGGCGGTGCTTTGCAAAGGGCCCGTGTTTCT...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CAA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCGAAGAACGTAGCCGCTaGGCGGCTCCGGGGCACGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSCVGNLVANLTGLRNGAEERSR*AAPGHA Trigger: TGCGTGCCCCGGAGCCGCCAAGCGGCTACGTTCTTC...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS CCA 90 bp | TGTGACAGAGGTATGGCCCAGTGCACCATGGAAACAAGGAAGAAATaGGGAGGGCAGAGGTTTCAAGGGGAAATGCTTGCGTTGTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: CDRGMAQCTMETRKK*GGQRFQGEMLALYF Trigger: AAAATACAACGCAAGCATTTCCCCTTGAAACCTCTGCCCTCCCCATTTCTTCCTTGTTTCCATGGTGCACTGGGCCATACCTCTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000477739.1 |
||
| CDS-3UTR CAA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAGAAATATGGGCATGTTaGCCCCTATGCTGTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGLGCIDIVDHEMSTLILEIWAC*PLCCVV Trigger: GACCACACAGCATAGGGGCAAACATGCCCATATTTC...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
||
| CDS-3UTR CAA 90 bp | ACCAGGTCTGAAGCACTGTCTTATACACTGTACGTGTACCTGCTATATGCAATAACAGCTAGCTGCACATaGTGTAGAGCAGCTTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TRSEALSYTLYVYLLYAITASCT*CRAASK Trigger: TTTAGAAGCTGCTCTACACAATGTGCAGCTAGCTGT...TATTGCATATAGCAGGTACACGTACAGTGTATAAGACAGTGCTTCAGACCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS GCA 90 bp | ATGATTATAGCTCACTGCAGCCTTGAACATCTATTATGTACATTGTaGTTGGCACATGGTACCGTGCTCAACAAAAGACATGTACACCAG | + |
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Preference number: 5 (lower is better) Translates to: MIIAHCSLEHLLCTL*LAHGTVLNKRHVHQ Trigger: CTGGTGTACATGTCTTTTGTTGAGCACGGTACCATGTGCCAAGCACAATGTACATAATAGATGTTCAAGGCTGCAGTGAGCTATAATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469102.1 |
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| CDS-3UTR CAA 90 bp | ACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTGTATTTGGTTCTGCTATGGTTaGATGTGTCCCCCAAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: TVRVPAICNTQYILTNCIWFCYG*MCPPRV Trigger: AACTCTTGGGGGACACATCAAACCATAGCAGAACCA...AATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS TCA 90 bp | CTTTGTATAAATAAATGTGATTTGAGAAGAGGGAGAGAGGACTTCTaGGATGAAGGGCAAGGAGACTTCATAGAGACAGGATGTAGAGAT | + |
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Preference number: 5 (lower is better) Translates to: LCINKCDLRRGREDF*DEGQGDFIETGCRD Trigger: ATCTCTACATCCTGTCTCTATGAAGTCTCCTTGCCCTTCATCTCAGAAGTCCTCTCTCCCTCTTCTCAAATCACATTTATTTATACAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469102.1 |
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| CDS-3UTR CAA 90 bp | ACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTGTATTCTCAGAAGAATGGAATaGGAGATTGTAGACGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: TVRVPAICNTQYILTNCILRRME*EIVDVV Trigger: AACCACGTCTACAATCTCCAATTCCATTCTTCTGAG...AATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAAATCTCTCAGATCTATaGCATGGGATTAGGGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: QGLGCIDIVDHEMSTLILNLSDL*HGIRES Trigger: ACTTTCCCTAATCCCATGCAATAGATCTGAGAGATT...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | CAGGGTTTGGGCTGTATTGATATTGTCGATCATGAAATGTCCACACTTATTCTAATTCAGAAAGGCTACTaGGAGAAGGTGTATCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: QGLGCIDIVDHEMSTLILIQKGY*EKVYLK Trigger: CTTAAGATACACCTTCTCCAAGTAGCCTTTCTGAAT...TAGAATAAGTGTGGACATTTCATGATCGACAATATCAATACAGCCCAAACCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTAGGGTGGAGATTTACTaGGTTCATACACCTTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LDFYICFAFVCSSNLPPFRVEIY*VHTPFA Trigger: GGCAAAAGGTGTATGAACCAAGTAAATCTCCACCCT...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | ACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTGTATTAGGGTTTGGGCTGTATaGATATTGTCGATCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: TVRVPAICNTQYILTNCIRVWAV*ILSIMK Trigger: TTTCATGATCGACAATATCAATACAGCCCAAACCCT...AATACAGTTTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACACCCTATTATGTTTaGATGCAGTATGAAAACCCT | + |
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Preference number: 5 (lower is better) Translates to: SYTLYVYLLYAILSTSSQTPYYV*MQYENP Trigger: AGGGTTTTCATACTGCATCAAAACATAATAGGGTGT...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | TCTTATACACTGTACGTGTACCTGCTATATGCAATACTCAGTACATCCTCACAAACTAAAACTAAAACTTaGCCTTTACCCAACCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SYTLYVYLLYAILSTSSQTKTKT*PLPNLP Trigger: TGGAAGGTTGGGTAAAGGCAAAGTTTTAGTTTTAGT...TTGTGAGGATGTACTGAGTATTGCATATAGCAGGTACACGTACAGTGTATAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | AGTTCATGTGTTGGAAACTTAGTTGCTAATTTAACAGGACTAAGAAATGGAGCCATATTTGCTTTGCTTTaGTCTGCTCTAGTAATCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSCVGNLVANLTGLRNGAIFALL*SALVIS Trigger: GGAGATTACTAGAGCAGACAAAAGCAAAGCAAATAT...GGCTCCATTTCTTAGTCCTGTTAAATTAGCAACTAAGTTTCCAACACATGAACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTTGGGCTGTATTGATATaGTCGATCATGAAATGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LDFYICFAFVCSSNLPPFWAVLI*SIMKCP Trigger: TGGACATTTCATGATCGACAATATCAATACAGCCCA...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS-3UTR CAA 90 bp | CTAGATTTCTATATTTGCTTTGCTTTTGTCTGCTCTAGTAATCTCCCTCCTTTTCATAGAAATCAGGGTTaGGGCTGTATTGATATTGTC | + |
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Preference number: 5 (lower is better) Translates to: LDFYICFAFVCSSNLPPFHRNQG*GCIDIV Trigger: GACAATATCAATACAGCCCAAACCCTGATTTCTATG...AAAAGGAGGGAGATTACTAGAGCAGACAAAAGCAAAGCAAATATAGAAATCTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466830.6 |
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| CDS CAA 72 bp | AGCGCCATCTCGGCGGGCCGAGAAGAACGTAGCCGCTaGGCGGCTCCGGGGCACGCAGGAAGGGGAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SAISAGREERSR*AAPGHAGRGVE Trigger: CTCCACTCCCCTTCCTGCGTGCCCCGGAGCCGCCAAGCGGCTACGTTCTTCTCGGCCCGCCGAGATGGCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000334841.10 ENST00000418849.2 ENST00000423894.5 ENST00000466830.6 ENST00000477739.1 |
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| CDS CAA 72 bp | ACATGTCTGAGATGCTGGTTTGCTCCTGAAGACAGTTaGGTGCTACTGTTTACTCTGCGGGGTCGAGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: TCLRCWFAPEDS*VLLFTLRGRAP Trigger: TGGCGCTCGACCCCGCAGAGTAAACAGTAGCACCAAACTGTCTTCAGGAGCAAACCAGCATCTCAGACATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418849.2 |
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| CDS GCA 72 bp | GCTAAGCTCTCACTGATACAGAAGCTGAACCCAGGTTaGCCTCTCTGCAGTCTATACTCCTGTCTACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: AKLSLIQKLNPG*PLCSLYSCLLC Trigger: GCAGAGTAGACAGGAGTATAGACTGCAGAGAGGGCAACCTGGGTTCAGCTTCTGTATCAGTGAGAGCTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477739.1 |
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| CDS GCA 72 bp | TCACTGATACAGAAGCTGAACCCAGGTTGCCCTCTCTaGAGTCTATACTCCTGTCTACTCTGCTCTAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SLIQKLNPGCPL*SLYSCLLCSRA Trigger: AGCTCTAGAGCAGAGTAGACAGGAGTATAGACTGCAGAGAGGGCAACCTGGGTTCAGCTTCTGTATCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477739.1 |
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| CDS GCA 72 bp | AAATCTACAAAATACTGTGACAGAGGTATGGCCCAGTaGACCATGGAAACAAGGAAGAAATGGGGAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KSTKYCDRGMAQ*TMETRKKWGGQ Trigger: CTGCCCTCCCCATTTCTTCCTTGTTTCCATGGTGCACTGGGCCATACCTCTGTCACAGTATTTTGTAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477739.1 |
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| CDS GCA 72 bp | GCTCACTGCAGCCTTGAACATCTATTATGTACATTGTaGTTGGCACATGGTACCGTGCTCAACAAAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: AHCSLEHLLCTL*LAHGTVLNKRH Trigger: ATGTCTTTTGTTGAGCACGGTACCATGTGCCAAGCACAATGTACATAATAGATGTTCAAGGCTGCAGTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469102.1 |
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| CDS CAA 90 bp | GGCATGATTATAGCTCACTGCAGCCTTGAACATCTATTATGTACATaGTGCTTGGCACATGGTACCGTGCTCAACAAAAGACATGTACAC | + |
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Preference number: 6 (lower is better) Translates to: GMIIAHCSLEHLLCT*CLAHGTVLNKRHVH Trigger: GTGTACATGTCTTTTGTTGAGCACGGTACCATGTGCCAAGCACAATGTACATAATAGATGTTCAAGGCTGCAGTGAGCTATAATCATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469102.1 |
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| CDS TCA 72 bp | CCTGTCTACTCTGCTCTAGAGCTCCCCCAACTGGAGTaGAGGATAATATGTCAAACTAGCAATAACAATTAT | + |
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Preference number: 6 (lower is better) Translates to: PVYSALELPQLE*RIICQTSNNNY Trigger: ATAATTGTTATTGCTAGTTTGACATATTATCCTTCACTCCAGTTGGGGGAGCTCTAGAGCAGAGTAGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000477739.1 |
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| CDS GCA 72 bp | ATCTATTATGTACATTGTGCTTGGCACATGGTACCGTaGTCAACAAAAGACATGTACACCAGTAAAAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: IYYVHCAWHMVP*STKDMYTSKRQ Trigger: CTGCCTTTTACTGGTGTACATGTCTTTTGTTGAGCACGGTACCATGTGCCAAGCACAATGTACATAATAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469102.1 |
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| CDS CCA 72 bp | GCAATCTTATCTGTCAATAATGTGGGCAATAGAACATaGGTGAATAAATCAGCATGTGAATTCAAAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: AILSVNNVGNRT*VNKSACEFKEL Trigger: AAGTTCTTTGAATTCACATGCTGATTTATTCACCCATGTTCTATTGCCCACATTATTGACAGATAAGATTGC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000477739.1 |
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| CDS CAA 72 bp | ATGTTCATTTCTGGAGACCACATTTTTAGACGAATCTaGACAAATAAGTACATTCCTTCAAAGGATTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: MFISGDHIFRRI*TNKYIPSKDFS Trigger: GCTGAAATCCTTTGAAGGAATGTACTTATTTGTCAAGATTCGTCTAAAAATGTGGTCTCCAGAAATGAACAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468330.1 |
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