RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLIC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000112782

Ensembl transcript IDs: ENST00000185206.12, ENST00000339561.12, ENST00000464137.1, ENST00000476852.1, ENST00000484572.2, ENST00000486570.2, ENST00000487396.3, ENST00000544153.3, ENST00000642250.1, ENST00000643162.1, ENST00000644324.1, ENST00000644878.1, ENST00000645626.1, ENST00000672327.1

Found 861 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTATGCTAGGCAAGGATCCCAGTGAGCAAGGAAAGGCCTGCAGATaGCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTGCTG +
Preference number: 1 (lower is better)
Translates to: TMLGKDPSEQGKACR*LSQRRPVHPGPWLL
Trigger: CAGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTCCTTGCTCACTGGGATCCTTGCCTAGCATAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 90 bp GGTGCGCAGCAGCAGCAGCGCAGCATTCCTGGCACTGCAACAAACTaGGAATGTGTCTCAAGTGACTTTCCAGTCTGGCCCTTAGTGCCC +
Preference number: 1 (lower is better)
Translates to: GAQQQQRSIPGTATN*ECVSSDFPVWPLVP
Trigger: GGGCACTAAGGGCCAGACTGGAAAGTCACTTGAGACACATTCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGCTGCTGCTGCGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp AGGAAAGGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTaGGCCTTGGCTGCTGAGCTGGTCATTTCTTCACACATTGGCTTG +
Preference number: 1 (lower is better)
Translates to: RKGLQMPLPTKTCAP*ALAAELVISSHIGL
Trigger: CAAGCCAATGTGTGAAGAAATGACCAGCTCAGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 90 bp GTCTCCAGGGCTGAACATCGTCACTATGCTAGGCAAGGATCCCAGTaGGCAAGGAAAGGCCTGCAGATGCCTCTCCCAACGAAGACCTGT +
Preference number: 1 (lower is better)
Translates to: VSRAEHRHYARQGSQ*ARKGLQMPLPTKTC
Trigger: ACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTCCTTGCTCACTGGGATCCTTGCCTAGCATAGTGACGATGTTCAGCCCTGGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR GCA 90 bp GGCTTTTACCCATTACAGGCTACAGTTGAATCAGGCAGGAGCAGCTaGTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGAAGCAGCT +
Preference number: 1 (lower is better)
Translates to: GFYPLQATVESGRSS*WRAPSRQTCIPEAA
Trigger: AGCTGCTTCTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAATGGGTAAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR GCA 90 bp GGTAGGGCTGGCTCATTAAGCAGAGGGCTCCTCGTTCTCAGAGGCTaGAGTCACAGCTTCACAGAAGCCTGTCACAGAAACAGCAGAAAG +
Preference number: 1 (lower is better)
Translates to: GRAGSLSRGLLVLRG*SHSFTEACHRNSRK
Trigger: CTTTCTGCTGTTTCTGTGACAGGCTTCTGTGAAGCTGTGACTGCAGCCTCTGAGAACGAGGAGCCCTCTGCTTAATGAGCCAGCCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR CCA 90 bp TCCAATCCGAGTCCTTGGAATTCTGCAGACTTCTCTGGGGTGGAGTaGCCTCACCGGAGGCTTGGTTCTGTTTTCTCTGTGGCAATTGGC +
Preference number: 1 (lower is better)
Translates to: SNPSPWNSADFSGVE*PHRRLGSVFSVAIG
Trigger: GCCAATTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp TCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAGGCTaGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTC +
Preference number: 1 (lower is better)
Translates to: SPTLTDPKHAEPRSG*PAERWTVSIISARF
Trigger: GAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp GAACATCCAATCCGAGTCCTTGGAATTCTGCAGACTTCTCTGGGGTaGAGTGGCCTCACCGGAGGCTTGGTTCTGTTTTCTCTGTGGCAA +
Preference number: 1 (lower is better)
Translates to: EHPIRVLGILQTSLG*SGLTGGLVLFSLWQ
Trigger: TTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp GAACTAGGAGGGGGCCAGACAATGAATGTTCAAGCCAAACTCTCATaGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGATA +
Preference number: 1 (lower is better)
Translates to: ELGGGQTMNVQAKLS*RAWARATLLPGMEI
Trigger: TATCTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGAACATTCATTGTCTGGCCCCCTCCTAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 90 bp CCTGGGCCTTGGCTGCTGAGCTGGTCATTTCTTCACACATTGGCTTaGCTTTGGGAGATGAGAACTAGGAGGGGGCCAGACAATGAATGT +
Preference number: 1 (lower is better)
Translates to: PGPWLLSWSFLHTLA*LWEMRTRRGPDNEC
Trigger: ACATTCATTGTCTGGCCCCCTCCTAGTTCTCATCTCCCAAAGTCAAGCCAATGTGTGAAGAAATGACCAGCTCAGCAGCCAAGGCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CCA 90 bp CTGGGGTGGAGTGGCCTCACCGGAGGCTTGGTTCTGTTTTCTCTGTaGCAATTGGCTATGATTCACAGATGTGTTTCCAGAACAGCCCAA +
Preference number: 1 (lower is better)
Translates to: LGWSGLTGGLVLFSL*QLAMIHRCVSRTAQ
Trigger: TTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp CCCTGGAGGCAGGTAGGTCCAGGGATTGCTTGGGTTAGAATTTGTTaGTATTTCTATGGAAAGGACCCGTGCTATCCTGCCCTTGCTGAG +
Preference number: 1 (lower is better)
Translates to: PWRQVGPGIAWVRIC*YFYGKDPCYPALAE
Trigger: CTCAGCAAGGGCAGGATAGCACGGGTCCTTTCCATAGAAATATCAACAAATTCTAACCCAAGCAATCCCTGGACCTACCTGCCTCCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp GCCTCACCGGAGGCTTGGTTCTGTTTTCTCTGTGGCAATTGGCTATaGTTCACAGATGTGTTTCCAGAACAGCCCAACTGTGGGTCTCAG +
Preference number: 1 (lower is better)
Translates to: ASPEAWFCFLCGNWL*FTDVFPEQPNCGSQ
Trigger: CTGAGACCCACAGTTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp ACCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTaGCAAATGGATTTTCTCACCGGGCGTTCACTGGGAGAAGGAGTT +
Preference number: 1 (lower is better)
Translates to: TSEHYRRGIVEGKGL*QMDFLTGRSLGEGV
Trigger: AACTCCTTCTCCCAGTGAACGCCCGGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp ACCAGCATCTTGATTCACCGTGCAGTTGAGATGGCCCCTGGCCAGTaGGAATTGAGGCGAGTCACAGAAGTACTTACCAAATACTCACCT +
Preference number: 1 (lower is better)
Translates to: TSILIHRAVEMAPGQ*ELRRVTEVLTKYSP
Trigger: AGGTGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACGGTGAATCAAGATGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp AGTGAGCATGAAAGCAGCAAGGGGGTAAGGATGCACACGGAGATCTaGCGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTT +
Preference number: 1 (lower is better)
Translates to: SEHESSKGVRMHTEI*RSQGLPCSCSEFAL
Trigger: AAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCTCCGTGTGCATCCTTACCCCCTTGCTGCTTTCATGCTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR GCA 90 bp ATGTGTTTCCAGAACAGCCCAACTGTGGGTCTCAGGGAAGTAAACTaGCTCTTAGGTCATCCTGCCTGTGCTGTAAATTCGGGGAAGGAT +
Preference number: 1 (lower is better)
Translates to: MCFQNSPTVGLREVN*LLGHPACAVNSGKD
Trigger: ATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGTTTACTTCCCTGAGACCCACAGTTGGGCTGTTCTGGAAACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp TTAGCTCCCACAGCCCAGATTAAGTTTTGGCATCCGAAGCCAAACTaGAGGCCTGACTTGGCTTCCCCTTCGCTCTTTGTGAACTTTAGA +
Preference number: 1 (lower is better)
Translates to: LAPTAQIKFWHPKPN*RPDLASPSLFVNFR
Trigger: TCTAAAGTTCACAAAGAGCGAAGGGGAAGCCAAGTCAGGCCTCCAGTTTGGCTTCGGATGCCAAAACTTAATCTGGGCTGTGGGAGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR GCA 90 bp TGTGGGTCTCAGGGAAGTAAACTGCCTCTTAGGTCATCCTGCCTGTaGTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCAC +
Preference number: 1 (lower is better)
Translates to: CGSQGSKLPLRSSCL*CKFGEGFLSTAGFH
Trigger: GTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGTTTACTTCCCTGAGACCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp AACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATaGATTTTCTCACCGGGCGTTCACTGGGAGAAGGAGTTGATGAGT +
Preference number: 1 (lower is better)
Translates to: NTIEGGLLKVRACGK*IFSPGVHWEKELMS
Trigger: ACTCATCAACTCCTTCTCCCAGTGAACGCCCGGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR GCA 90 bp GTGATGCTAAACTCTTTACAAGATAGACCCGCAGCTTCCTGCCTCTaGCTCTCTCTTAGTTCTATTTGTCCAGGCCTTGCTGATTTCTGG +
Preference number: 1 (lower is better)
Translates to: VMLNSLQDRPAASCL*LSLSSICPGLADFW
Trigger: CCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGCAGAGGCAGGAAGCTGCGGGTCTATCTTGTAAAGAGTTTAGCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR GCA 90 bp CTCACAGTGATGCTAAACTCTTTACAAGATAGACCCGCAGCTTCCTaGCTCTGCCTCTCTCTTAGTTCTATTTGTCCAGGCCTTGCTGAT +
Preference number: 1 (lower is better)
Translates to: LTVMLNSLQDRPAAS*LCLSLSSICPGLAD
Trigger: ATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGCAGAGGCAGGAAGCTGCGGGTCTATCTTGTAAAGAGTTTAGCATCACTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR GCA 90 bp GGCAGAGTTAGTTTAATTGAACTGCAGCAGGGAACCGACGGGCGTTaGCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCA +
Preference number: 1 (lower is better)
Translates to: GRVSLIELQQGTDGR*PENQNNSSVAGDIS
Trigger: TGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCAGTTCAATTAAACTAACTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
3UTR CCA 90 bp GCACAGAACTGTGAAGAGCTTCTGTTGTTTCATTTGATAAGGGCCTaGAAAGTCAGCCTGGGAAAACTCGCACTTGGTGTGGCCTTTTTC +
Preference number: 1 (lower is better)
Translates to: AQNCEELLLFHLIRA*KVSLGKLALGVAFF
Trigger: GAAAAAGGCCACACCAAGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTTCACAGTTCTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 90 bp ACAGTATGGCTATCTGATACTAGGCTGACGAGGGTCAGGAAAGAATaGGGGAAGAAGTGCTCATTGACAGAGCTTAGGGGGATACAACTA +
Preference number: 1 (lower is better)
Translates to: TVWLSDTRLTRVRKE*GKKCSLTELRGIQL
Trigger: TAGTTGTATCCCCCTAAGCTCTGTCAATGAGCACTTCTTCCCCCATTCTTTCCTGACCCTCGTCAGCCTAGTATCAGATAGCCATACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR TCA 90 bp CTCTTAGGTCATCCTGCCTGTGCTGTAAATTCGGGGAAGGATTTCTaGGTACAGCAGGATTTCACACTAATTAAAAGGCCTTCGGGATCA +
Preference number: 1 (lower is better)
Translates to: LLGHPACAVNSGKDF*VQQDFTLIKRPSGS
Trigger: TGATCCCGAAGGCCTTTTAATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp GCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCAATaGAAAGGAAGCCTCCTACCCTATAGCTGTATAGTTGTGGGGTCC +
Preference number: 1 (lower is better)
Translates to: ATKMLSERFVFIQDQ*KGSLLPYSCIVVGS
Trigger: GGACCCCACAACTATACAGCTATAGGGTAGGAGGCTTCCTTTTCATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp TTCTCTCTGGGCCAAACTCAGAAGCAGGCATTGCTGACTAGACAGTaGATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTT +
Preference number: 1 (lower is better)
Translates to: FSLGQTQKQALLTRQ*IQLSHSEFDSCFCL
Trigger: AAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAATTCACTGTCTAGTCAGCAATGCCTGCTTCTGAGTTTGGCCCAGAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp GCCATCTTCTTTTTGATCTCCAGCTTCTCTGGGTTAACCACCCACTaGATTTTCTCCAAGGACAGGGCTTCACTGAGTAATTTAAGGCAG +
Preference number: 1 (lower is better)
Translates to: AIFFLISSFSGLTTH*IFSKDRASLSNLRQ
Trigger: CTGCCTTAAATTACTCAGTGAAGCCCTGTCCTTGGAGAAAATTCAGTGGGTGGTTAACCCAGAGAAGCTGGAGATCAAAAAGAAGATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 90 bp ATTATGAATCGAAAGTATCCTGACACTAAGCTGGGAGATGCATACTaGCAAAGGGGAAGAATGTGTGTTGATGAGGAGGGCACATGTTGC +
Preference number: 1 (lower is better)
Translates to: IMNRKYPDTKLGDAY*QRGRMCVDEEGTCC
Trigger: GCAACATGTGCCCTCCTCATCAACACACATTCTTCCCCTTTGTCAGTATGCATCTCCCAGCTTAGTGTCAGGATACTTTCGATTCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp AAACAGCAGAAAGTGGTCCAGGTTGAAGTGGGAGATTGTTTTGGATaGCCTCTAAATGTCCTTTCCAACTCTCAGATTCCCAGGGTTTGT +
Preference number: 1 (lower is better)
Translates to: KQQKVVQVEVGDCFG*PLNVLSNSQIPRVC
Trigger: ACAAACCCTGGGAATCTGAGAGTTGGAAAGGACATTTAGAGGTCATCCAAAACAATCTCCCACTTCAACCTGGACCACTTTCTGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR CCA 90 bp CTCTGCCTCTCTCTTAGTTCTATTTGTCCAGGCCTTGCTGATTTCTaGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCT +
Preference number: 1 (lower is better)
Translates to: LCLSLSSICPGLADF*DSHMVKIYFRHDLS
Trigger: AGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp TACTCAATACCTTCTCTCTGGGCCAAACTCAGAAGCAGGCATTGCTaGCTAGACAGTGAATTCAACTCAGTCATTCTGAGTTTGACTCTT +
Preference number: 1 (lower is better)
Translates to: YSIPSLWAKLRSRHC*LDSEFNSVILSLTL
Trigger: AAGAGTCAAACTCAGAATGACTGAGTTGAATTCACTGTCTAGTCAGCAATGCCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp AAGGAGTTGGTGTTGCATGTTTCTAAAGCATCTGAGAAGGTATTTTaGTATTGGCAGAAGAAGCTAGTGGCAATCCCATATGTGGGCTCT +
Preference number: 1 (lower is better)
Translates to: KELVLHVSKASEKVF*YWQKKLVAIPYVGS
Trigger: AGAGCCCACATATGGGATTGCCACTAGCTTCTTCTGCCAATATCAAAATACCTTCTCAGATGCTTTAGAAACATGCAACACCAACTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 90 bp TCACTGAGTAATTTAAGGCAGGTGGGAATTGAGGAAATCACAGGATaGAGCCCAAGGCTTGGGAGATTCATTTGTTTGCTTTGTTCAACA +
Preference number: 1 (lower is better)
Translates to: SLSNLRQVGIEEITG*SPRLGRFICLLCST
Trigger: TGTTGAACAAAGCAAACAAATGAATCTCCCAAGCCTTGGGCTTCATCCTGTGATTTCCTCAATTCCCACCTGCCTTAAATTACTCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 90 bp CCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATaGCACTACATGCTGCAAATGGTTAGTAAGTGCAATGATAGCAAG +
Preference number: 1 (lower is better)
Translates to: PFQLSDSQGLLYRRG*HYMLQMVSKCNDSK
Trigger: CTTGCTATCATTGCACTTACTAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR TCA 90 bp GGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTGCTCTTGACTTTGGGAGATaGGAACTAGGAGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GLQMPLPTKTCAPWALAALDFGR*ELGGGQ
Trigger: CTGGCCCCCTCCTAGTTCTCATCTCCCAAAGTCAAG...AGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR TCA 90 bp GAAAGGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCATGCACACGGAGATCTaGCGTTCGCAGGGACTTCCA +
Preference number: 2 (lower is better)
Translates to: ERPADASPNEDLCTLGLGMHTEI*RSQGLP
Trigger: TGGAAGTCCCTGCGAACGTCAGATCTCCGTGTGCAT...GCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR TCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTACCCTCCCGTGCTCCCTaGGTTGTTCTTGGGACACCT +
Preference number: 2 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVPSRAP*VVLGTP
Trigger: AGGTGTCCCAAGAACAACTCAGGGAGCACGGGAGGG...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGGCCAATTTCCTTTTCTaGCAGGGCCTGGACGGCATG +
Preference number: 2 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQANFLF*QGLDGM
Trigger: CATGCCGTCCAGGCCCTGCCAGAAAAGGAAATTGGC...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTGAGCCCAGATCAGGCTaGCCGGCCGAAAGGTGGACT +
Preference number: 2 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSEPRSG*PAERWT
Trigger: AGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTC...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACAAGCCAGGGACAGCATaGGCCAGGTGCGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHKPGTA*ARCAAA
Trigger: TGCTGCTGCGCACCTGGCCCATGCTGTCCCTGGCTT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GAAAGGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCGGAACTCGGGTCTCCTaGTCTTTGCATTGTATCACT +
Preference number: 2 (lower is better)
Translates to: ERPADASPNEDLCTLGLGGTRVS*SLHCIT
Trigger: AGTGATACAATGCAAAGATCAGGAGACCCGAGTTCC...GCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGTGGCCGGCCGAAAGGTaGACTGTGTCTATCATTTCT +
Preference number: 2 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQWPAER*TVSIIS
Trigger: AGAAATGATAGACACAGTCCACCTTTCGGCCGGCCA...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp GAAAGGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCGCCCAGATTAAGTTTTaGCATCCGAAGCCAAACTGG +
Preference number: 2 (lower is better)
Translates to: ERPADASPNEDLCTLGLGAQIKF*HPKPNW
Trigger: CCAGTTTGGCTTCGGATGCCAAAACTTAATCTGGGC...GCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR GCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTCAGGCAGGAGCAGCTaGTGGAGAGCACCCAGCCGA +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKSGRSS*WRAPSR
Trigger: TCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAGCAGCGCAGCATTCCTaGCACTGCAACAAACTGAGA +
Preference number: 2 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVAAQHS*HCNKLR
Trigger: TCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGC...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATCATCCGAAGCCAAACTaGAGGCCTGACTTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: SSQTLMESLGQSNSASRDHPKPN*RPDLAS
Trigger: GGAAGCCAAGTCAGGCCTCCAGTTTGGCTTCGGATG...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CAA 90 bp GAAGCTCAAGGAGGCCACACAGCCAACAAGCAGCAGAGGGTGACCTaGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAAC +
Preference number: 2 (lower is better)
Translates to: EAQGGHTANKQQRVT*GPYYLTSGSRFLTN
Trigger: GTTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTCTGCTGCTTGTTGGCTGTGTGGCCTCCTTGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR TCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTATGCGCCTCAAGGCAGTaGTACAGAGGAGTCTATGAA +
Preference number: 2 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVCASRQ*YRGVYE
Trigger: TTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCA...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGTGCATTGTATCACTCTaGCACAGTGTGACTGAGCTG +
Preference number: 2 (lower is better)
Translates to: AKLSWRAWARATLLPGMECIVSL*HSVTEL
Trigger: CAGCTCAGTCACACTGTGTCAGAGTGATACAATGCA...CTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR TCA 90 bp CTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGATAAACGAGGAAATCACAGGATaGAGCCCAAGGCTTGGGAGA +
Preference number: 2 (lower is better)
Translates to: LSWRAWARATLLPGMEINEEITG*SPRLGR
Trigger: TCTCCCAAGCCTTGGGCTTCATCCTGTGATTTCCTC...GTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTGTGGTTGAGTCCTTCTaGAGCGGGGATGGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGVVESF*SGDGAK
Trigger: TTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCAC...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAGGAGTCTTAGGGGAGTaGTTGAGTCCTTCTGCAGCG +
Preference number: 2 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSGVLGE*LSPSAA
Trigger: CGCTGCAGAAGGACTCAACCACTCCCCTAAGACTCC...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGAAGCCAGGGACAGCATaGGCCAGGTGCGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSKPGTA*ARCAAA
Trigger: TGCTGCTGCGCACCTGGCCCATGCTGTCCCTGGCTT...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGAGCAAGCAAACCCCATaGCTGGTAGACCCCGTGGGT +
Preference number: 2 (lower is better)
Translates to: PANTIEGGLLKVRACGKWSKQTP*LVDPVG
Trigger: ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGCCTCACCGGAGGCTTaGTTCTGTTTTCTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHASPEA*FCFLCG
Trigger: GCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAAGATCAAGACTTCACTaGCCCCACCAGCACAAGAAG +
Preference number: 2 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVRSRLH*PHQHKK
Trigger: CTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp TCAGACCACCTCCTAAATGTGGCTTTTACCCATTACAGGCTACAGTaGAATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGA +
Preference number: 2 (lower is better)
Translates to: SDHLLNVAFTHYRLQ*NQAGAAAGEHPADR
Trigger: TCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAATGGGTAAAAGCCACATTTAGGAGGTGGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAAGGTTAGCAGTTACATaGTGCCACCAGTCCAAGACT +
Preference number: 2 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVRLAVT*CHQSKT
Trigger: AGTCTTGGACTGGTGGCATCATGTAACTGCTAACCT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTACCAGTTGCTGAATTCTaGACATCCAATCCGAGTCCT +
Preference number: 2 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVPVAEF*TSNPSP
Trigger: AGGACTCGGATTGGATGTTCAGAATTCAGCAACTGG...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GGGCCAGACAATGAATGTTCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCGGGTTAACCACCCACTaGATTTTCTCCAAGGACAGG +
Preference number: 2 (lower is better)
Translates to: GPDNECSSQTLMESLGQSGLTTH*IFSKDR
Trigger: CCTGTCCTTGGAGAAAATTCAGTGGGTGGTTAACCC...GCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGAACATTCATTGTCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR GCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAACCCAGCCGACAGACCTaGATTCCAGAAGCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: HLGASPFTSEHYRRGIVEPSRQT*IPEAAW
Trigger: CCAAGCTGCTTCTGGAATGCAGGTCTGTCGGCTGGG...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGCTGCAGACCCTCCCGTaGTCCCTGAGTTGTTCTTGG +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKLQTLP*SLSCSW
Trigger: CCAAGAACAACTCAGGGAGCACGGGAGGGTCTGCAG...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTGATGGCGTTTGTCCTTaGCCTTGTAGGTATGGACGG +
Preference number: 2 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGDGVCP*PCRYGR
Trigger: CCGTCCATACCTACAAGGCCAAGGACAAACGCCATC...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTGATGGCGTTTGTCCTTaGCCTTGTAGGTATGGACGG +
Preference number: 2 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSDGVCP*PCRYGR
Trigger: CCGTCCATACCTACAAGGCCAAGGACAAACGCCATC...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACAGGGCCTGTGGCAAATaGATTTTCTCACCGGGCGTT +
Preference number: 2 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHRACGK*IFSPGV
Trigger: AACGCCCGGTGAGAAAATCCATTTGCCACAGGCCCT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp TGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTaGAAGGTAAGGGCCTGTGGCAAATGGATTTTCTCACCGGGCGTT +
Preference number: 2 (lower is better)
Translates to: WEPHPLPANTIEGGL*KVRACGKWIFSPGV
Trigger: AACGCCCGGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp ACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATaGTTGAAGGTAAGGGCCTGTGGCAAATGGATTTTCTCACCGGGC +
Preference number: 2 (lower is better)
Translates to: TWEPHPLPANTIEGG*LKVRACGKWIFSPG
Trigger: GCCCGGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGGTGGTTGAGTCCTTCTaGAGCGGGGATGGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKVVESF*SGDGAK
Trigger: TTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCAC...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACAGGTCATCCTGCCTGTaGTGTAAATTCGGGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHRSSCL*CKFGEG
Trigger: TCCTTCCCCGAATTTACAGCACAGGCAGGATGACCT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACCTCAGGGAAGTAAACTaGCTCTTAGGTCATCCTGCC +
Preference number: 2 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHLREVN*LLGHPA
Trigger: GGCAGGATGACCTAAGAGGCAGTTTACTTCCCTGAG...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTTGTGGGGTCCCAACTaGAGACCCTCCCGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLLWGPN*RPSRAP
Trigger: GGGAGCACGGGAGGGTCTGCAGTTGGGACCCCACAA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp TGCCCAATAACCAGAGTGTCAGAAGTAGTGAGACTGAAGCTGTGTTaGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTC +
Preference number: 2 (lower is better)
Translates to: CPITRVSEVVRLKLC*PDTQVHSQLGTPPF
Trigger: GAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAACACAGCTTCAGTCTCACTACTTCTGACACTCTGGTTATTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp TGGAGTGGCCTCACCGGAGGCTTGGTTCTGTTTTCTCTGTGGCAATaGGCTATGATTCACAGATGTGTTTCCAGAACAGCCCAACTGTGG +
Preference number: 2 (lower is better)
Translates to: WSGLTGGLVLFSLWQ*AMIHRCVSRTAQLW
Trigger: CCACAGTTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCCACTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp GGAATTCTGCAGACTTCTCTGGGGTGGAGTGGCCTCACCGGAGGCTaGGTTCTGTTTTCTCTGTGGCAATTGGCTATGATTCACAGATGT +
Preference number: 2 (lower is better)
Translates to: GILQTSLGWSGLTGG*VLFSLWQLAMIHRC
Trigger: ACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp ATCTTGATTCACCGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATaGAGGCGAGTCACAGAAGTACTTACCAAATACTCACCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: ILIHRAVEMAPGQWE*RRVTEVLTKYSPAA
Trigger: AGCAGCAGGTGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACGGTGAATCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp GCCCAGATTAAGTTTTGGCATCCGAAGCCAAACTGGAGGCCTGACTaGGCTTCCCCTTCGCTCTTTGTGAACTTTAGAGGTTTGCCAGGT +
Preference number: 2 (lower is better)
Translates to: AQIKFWHPKPNWRPD*ASPSLFVNFRGLPG
Trigger: ACCTGGCAAACCTCTAAAGTTCACAAAGAGCGAAGGGGAAGCCAAGTCAGGCCTCCAGTTTGGCTTCGGATGCCAAAACTTAATCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACATACAGAGGAGTCTATaGAGCTGGAGTCTTAGGGGA +
Preference number: 2 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHIQRSL*SWSLRG
Trigger: TCCCCTAAGACTCCAGCTTCATAGACTCCTCTGTAT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTAGAATGTGTCTCAAGTaGCTTTCCAGTCTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGRMCLK*LSSLAL
Trigger: AAGGGCCAGACTGGAAAGTCACTTGAGACACATTCT...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCTGAAAGCGAGCCACGCAAGAAGGCAGGTGGGAATTaGGGAAATCACAGGATGAAG +
Preference number: 2 (lower is better)
Translates to: QSNSASRDGDKPESEPRKKAGGN*GNHRMK
Trigger: CTTCATCCTGTGATTTCCTCAATTCCCACCTGCCTT...CTTGCGTGGCTCGCTTTCAGGTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR GCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACTCCCATCCCAGTCACTaGAGTTTAGAATTGCATGCC +
Preference number: 2 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHSHPSH*SLELHA
Trigger: GGCATGCAATTCTAAACTGCAGTGACTGGGATGGGA...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATAGGGCCTGGACGGCATaGAAGCCAGGGACAGCATGG +
Preference number: 2 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNRAWTA*KPGTAW
Trigger: CCATGCTGTCCCTGGCTTCCATGCCGTCCAGGCCCT...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTTTTCTGGCAGGGCCTaGACGGCATGGAAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLFSGRA*TAWKPG
Trigger: CCCTGGCTTCCATGCCGTCCAGGCCCTGCCAGAAAA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATTCTCTGGGGTGGAGTaGCCTCACCGGAGGCTTGGT +
Preference number: 2 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLFSGVE*PHRRLG
Trigger: ACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATATACAGAGGAGTCTATaGAGCTGGAGTCTTAGGGGA +
Preference number: 2 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYIQRSL*SWSLRG
Trigger: TCCCCTAAGACTCCAGCTTCATAGACTCCTCTGTAT...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTGCGCCTCAAGGCAGTaGTACAGAGGAGTCTATGAA +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKCASRQ*YRGVYE
Trigger: TTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTTTGACTCTTGCTTCTaGCTTCGTCTCCCACTACCC +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKFDSCF*LRLPLP
Trigger: GGGTAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGAGTGACTTTCCAGTCTaGCCCTTAGTGCCCAATAAC +
Preference number: 2 (lower is better)
Translates to: PANTIEGGLLKVRACGKWSDFPV*PLVPNN
Trigger: GTTATTGGGCACTAAGGGCCAGACTGGAAAGTCACT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGGCAGCGCAGCATTCCTaGCACTGCAACAAACTGAGA +
Preference number: 2 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSAAQHS*HCNKLR
Trigger: TCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGC...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATTTTTCTGGCAGGGCCTaGACGGCATGGAAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNFSGRA*TAWKPG
Trigger: CCCTGGCTTCCATGCCGTCCAGGCCCTGCCAGAAAA...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAGTTCTGTTTTCTCTGTaGCAATTGGCTATGATTCAC +
Preference number: 2 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVVLFSL*QLAMIH
Trigger: GTGAATCATAGCCAATTGCCACAGAGAAAACAGAAC...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATATGAAGCCCAAGGCTTaGGAGATTCATTTGTTTGCT +
Preference number: 2 (lower is better)
Translates to: SSQTLMESLGQSNSASRDMKPKA*EIHLFA
Trigger: AGCAAACAAATGAATCTCCCAAGCCTTGGGCTTCAT...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATTGGGATCTGATAAGCTaGATCAGCAGAAATCCAAAG +
Preference number: 2 (lower is better)
Translates to: SSQTLMESLGQSNSASRDWDLIS*ISRNPK
Trigger: CTTTGGATTTCTGCTGATCCAGCTTATCAGATCCCA...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CAA 90 bp AGGCCTGACTTGGCTTCCCCTTCGCTCTTTGTGAACTTTAGAGGTTaGCCAGGTTTCTGGGATCTGATAAGCTGGATCAGCAGAAATCCA +
Preference number: 2 (lower is better)
Translates to: RPDLASPSLFVNFRG*PGFWDLISWISRNP
Trigger: TGGATTTCTGCTGATCCAGCTTATCAGATCCCAGAAACCTGGCAAACCTCTAAAGTTCACAAAGAGCGAAGGGGAAGCCAAGTCAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR TCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATAGGCTGGAGTTCCCATaGTACCAGCAAGATGAGGCT +
Preference number: 2 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDRLEFP*YQQDEA
Trigger: AGCCTCATCTTGCTGGTATCATGGGAACTCCAGCCT...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATGGGCTCTCCAACACTaGCTGACCCCAAACATGCTG +
Preference number: 2 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLWALQH*LTPNML
Trigger: CAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTGGGCTCTCCAACACTaGCTGACCCCAAACATGCTG +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLWALQH*LTPNML
Trigger: CAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGATTACAGGCTACAGTTaGATCAGGCAGGAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSITGYS*IRQEQL
Trigger: CAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAAT...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGGAAGGCCAGACAGGCTaGAGCATCTGGAGAAAGATC +
Preference number: 2 (lower is better)
Translates to: QALLISGTLIWSRSISGMEGQTG*SIWRKI
Trigger: GATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTC...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAGGAGTCTTAGGGGAGTaGTTGAGTCCTTCTGCAGCG +
Preference number: 2 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLGVLGE*LSPSAA
Trigger: CGCTGCAGAAGGACTCAACCACTCCCCTAAGACTCC...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGGAAGGTAAGGGCCTGTaGCAAATGGATTTTCTCACC +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKEGKGL*QMDFLT
Trigger: GGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTC...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCGTTCCTCTTCCTCAATaGGCTCTAGGAGACCTCCTG +
Preference number: 2 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTVPLPQ*ALGDLL
Trigger: CAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAAC...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGCCTCACCGGAGGCTTaGTTCTGTTTTCTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLASPEA*FCFLCG
Trigger: GCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp CAGCTTCCTGCCTCTGCCTCTCTCTTAGTTCTATTTGTCCAGGCCTaGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGC +
Preference number: 2 (lower is better)
Translates to: QLPASASLLVLFVQA*LISGTLIWSRSISG
Trigger: GCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGCAGAGGCAGGAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATaGGCCATCTTCTTTTTGATCTCCAGCTTCTCTGGGTTAACCACC +
Preference number: 2 (lower is better)
Translates to: EIQRDRGQGLAFVLS*AIFFLISSFSGLTT
Trigger: GGTGGTTAACCCAGAGAAGCTGGAGATCAAAAAGAAGATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR TCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATATTACAGGCTACAGTTaGATCAGGCAGGAGCAGCTG +
Preference number: 2 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDITGYS*IRQEQL
Trigger: CAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAAT...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGTTCATTCAGGACCAATaGAAAGGAAGCCTCCTACCC +
Preference number: 2 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSFIQDQ*KGSLLP
Trigger: GGGTAGGAGGCTTCCTTTTCATTGGTCCTGAATGAA...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGTTGTCCAGGCCTTGCTaGTTTCTGGGACTCTCATAT +
Preference number: 2 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSLSRPC*FLGLSY
Trigger: ATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAA...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATATTTGCTCTTTCATATaGAAACAGTTAGCTCCCACA +
Preference number: 2 (lower is better)
Translates to: SSQTLMESLGQSNSASRDICSFI*KQLAPT
Trigger: TGTGGGAGCTAACTGTTTTCATATGAAAGAGCAAAT...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGTGGCCGGCCGAAAGGTaGACTGTGTCTATCATTTCT +
Preference number: 2 (lower is better)
Translates to: QALLISGTLIWSRSISGMWPAER*TVSIIS
Trigger: AGAAATGATAGACACAGTCCACCTTTCGGCCGGCCA...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTAGCAAGCAAACCCCATaGCTGGTAGACCCCGTGGGT +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSSKQTP*LVDPVG
Trigger: ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGAGATCAAGACTTCACTaGCCCCACCAGCACAAGAAG +
Preference number: 2 (lower is better)
Translates to: QALLISGTLIWSRSISGMRSRLH*PHQHKK
Trigger: CTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCT...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATTCGGGGAAGGATTTCTaGGTACAGCAGGATTTCACA +
Preference number: 2 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDSGKDF*VQQDFT
Trigger: TGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGA...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTGTGGCAATTGGCTATaGTTCACAGATGTGTTTCCA +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKCGNWL*FTDVFP
Trigger: TGGAAACACATCTGTGAATCATAGCCAATTGCCACA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGACTGTTGCTGAGACATaGTGTGCTGCACATATGATA +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKTVAET*CAAHMI
Trigger: TATCATATGTGCAGCACATCATGTCTCAGCAACAGT...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGAGAAGCAGGCATTGCTaGCTAGACAGTGAATTCAAC +
Preference number: 2 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSRSRHC*LDSEFN
Trigger: GTTGAATTCACTGTCTAGTCAGCAATGCCTGCTTCT...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp ATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTACAGGGTCCAGGTTCTTaGCCAACAGGTGGTACTGTC +
Preference number: 2 (lower is better)
Translates to: IPRVCYIGEDDTTCCKWLQGPGS*PTGGTV
Trigger: GACAGTACCACCTGTTGGTCAAGAACCTGGACCCTG...TAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGCTCAGGGAAGTAAACTaGCTCTTAGGTCATCCTGCC +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLLREVN*LLGHPA
Trigger: GGCAGGATGACCTAAGAGGCAGTTTACTTCCCTGAG...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGAGTCCTTGGAATTCTaGAGACTTCTCTGGGGTGGA +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLESLEF*RLLWGG
Trigger: TCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGCCAATTTCCTTTTCTaGCAGGGCCTGGACGGCATG +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSANFLF*QGLDGM
Trigger: CATGCCGTCCAGGCCCTGCCAGAAAAGGAAATTGGC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTGTGCACCCTGGGCCTTaGCTGCTGAGCTGGTCATTT +
Preference number: 2 (lower is better)
Translates to: KYILLLMLVFPFLFVSRAVHPGP*LLSWSF
Trigger: AAATGACCAGCTCAGCAGCCAAGGCCCAGGGTGCAC...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGAGAATGTGTCTCAAGTaGCTTTCCAGTCTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLRMCLK*LSSLAL
Trigger: AAGGGCCAGACTGGAAAGTCACTTGAGACACATTCT...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGGCACTGCAACAAACTaGGAATGTGTCTCAAGTGAC +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLGTATN*ECVSSD
Trigger: GTCACTTGAGACACATTCTCAGTTTGTTGCAGTGCC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTGGAAAGGTTCCTTTTaGGGTGGAAATGAATCAACT +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKWKGSF*GGNEST
Trigger: AGTTGATTCATTTCCACCTCAAAAGGAACCTTTCCA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTCGGGGAAGGATTTCTaGGTACAGCAGGATTTCACA +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLSGKDF*VQQDFT
Trigger: TGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp TCTAAATGTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGAGCCAGGGAAATCCTATaGGGAAGAGGCCTTTGGAGT +
Preference number: 2 (lower is better)
Translates to: SKCPFQLSDSQGLLYRRGAREIL*GRGLWS
Trigger: ACTCCAAAGGCCTCTTCCTCATAGGATTTCCCTGGC...TCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGACATTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR GCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCTTAAGTACCCAGAAGTaGCTTCCTTCTGTACTCCTC +
Preference number: 2 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTLSTQK*LPSVLL
Trigger: GAGGAGTACAGAAGGAAGGCACTTCTGGGTACTTAA...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTGGAAAGGCCTGCAGATaGCTCTCCCAACGAAGACCT +
Preference number: 2 (lower is better)
Translates to: KYILLLMLVFPFLFVSRAGKACR*LSQRRP
Trigger: AGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTCC...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATGCAGCTTGGAGAAACTaGGAAGACATTTTTGACCCA +
Preference number: 2 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDAAWRN*EDIFDP
Trigger: TGGGTCAAAAATGTCTTCCCAGTTTCTCCAAGCTGC...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTTGTTGATATTTCTATaGAAAGGACCCGTGCTATCC +
Preference number: 2 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKLLIFL*KGPVLS
Trigger: GGATAGCACGGGTCCTTTCCATAGAAATATCAACAA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGTTCCTCTTCCTCAATaGGCTCTAGGAGACCTCCTG +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSVPLPQ*ALGDLL
Trigger: CAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAAC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCTCCAATCCGAGTCCTTaGAATTCTGCAGACTTCTCT +
Preference number: 2 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTSNPSP*NSADFS
Trigger: AGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGA...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTCAATACCTTCTCTCTaGGCCAAACTCAGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLSIPSL*AKLRSR
Trigger: CCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTACTGGAGGCCTGACTTaGCTTCCCCTTCGCTCTTTG +
Preference number: 2 (lower is better)
Translates to: KYILLLMLVFPFLFVSRATGGLT*LPLRSL
Trigger: CAAAGAGCGAAGGGGAAGCCAAGTCAGGCCTCCAGT...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CCA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTCTCTCATGGAGAGCCTaGGCCAGAGCAACTCTGCTT +
Preference number: 2 (lower is better)
Translates to: KYILLLMLVFPFLFVSRALSWRA*ARATLL
Trigger: AAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAG...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CAA 90 bp CCAGAAGCAGCTTGGAGAAACTGGGAAGACATTTTTGACCCATTCTaGGGTTTTTACTGTAAGGTTAGCAGTTACATGATGCCACCAGTC +
Preference number: 2 (lower is better)
Translates to: PEAAWRNWEDIFDPF*GFYCKVSSYMMPPV
Trigger: GACTGGTGGCATCATGTAACTGCTAACCTTACAGTAAAAACCCAAGAATGGGTCAAAAATGTCTTCCCAGTTTCTCCAAGCTGCTTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAATCTGAGAAGGTATTTTaGTATTGGCAGAAGAAGCTA +
Preference number: 2 (lower is better)
Translates to: HLGASPFTSEHYRRGIVESEKVF*YWQKKL
Trigger: TAGCTTCTTCTGCCAATATCAAAATACCTTCTCAGA...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAGGCACTGCAACAAACTaGGAATGTGTCTCAAGTGAC +
Preference number: 2 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERGTATN*ECVSSD
Trigger: GTCACTTGAGACACATTCTCAGTTTGTTGCAGTGCC...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATAGGTTAGCAGTTACATaGTGCCACCAGTCCAAGACT +
Preference number: 2 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNRLAVT*CHQSKT
Trigger: AGTCTTGGACTGGTGGCATCATGTAACTGCTAACCT...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGGCTTTGGATCCATCATaGTTTTACTTATCCAGCTTA +
Preference number: 2 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSALDPS*FYLSSL
Trigger: TAAGCTGGATAAGTAAAATCATGATGGATCCAAAGC...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTGGGGCACAGAACTGTaGAGAGCTTCTGTTGTTTCA +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSWGTEL*RASVVS
Trigger: TGAAACAACAGAAGCTCTTCACAGTTCTGTGCCCCA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGAAAAGGAGTTGGTGTTaGATGTTTCTAAAGCATCTG +
Preference number: 2 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSKRSWC*MFLKHL
Trigger: CAGATGCTTTAGAAACATGCAACACCAACTCCTTTT...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTCCCATCCCAGTCACTaGAGTTTAGAATTGCATGCC +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSSHPSH*SLELHA
Trigger: GGCATGCAATTCTAAACTGCAGTGACTGGGATGGGA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTAGTGACTTTCCAGTCTaGCCCTTAGTGCCCAATAAC +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSSDFPV*PLVPNN
Trigger: GTTATTGGGCACTAAGGGCCAGACTGGAAAGTCACT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp AGTAAGTGCAATGATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTGAGGAAGTGAGAAGGTaGGTCTGTGCACAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: SKCNDSKKVTSLLATSTSEEVRR*VCAQRK
Trigger: TTTTCTTTGTGCACAGACCCACCTTCTCACTTCCTC...AGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATCATTGCACTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTGGAAAGGTTCCTTTTaGGGTGGAAATGAATCAACT +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLWKGSF*GGNEST
Trigger: AGTTGATTCATTTCCACCTCAAAAGGAACCTTTCCA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGTTCTTTATCAGGAGATaGAGAAACTGTGCTTTGGAT +
Preference number: 2 (lower is better)
Translates to: QALLISGTLIWSRSISGMFFIRR*RNCALD
Trigger: ATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAA...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTATATATATGTGCCTGTaGGACTTGATGGCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTIYMCL*DLMAVF
Trigger: AAAGACTGCCATCAAGTCTCACAGGCACATATATAT...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
3UTR-3UTR TCA 90 bp GTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTAAGAGGCCTTTGGAGTaGTATGACTGTATACAACAA +
Preference number: 2 (lower is better)
Translates to: VLSNSQIPRVCYIGEDDTKRPLE*YDCIQQ
Trigger: TTGTTGTATACAGTCATATCACTCCAAAGGCCTCTT...AGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR CCA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTGGTTTGCCAGGTTTCTaGGATCTGATAAGCTGGATC +
Preference number: 2 (lower is better)
Translates to: KYILLLMLVFPFLFVSRAGLPGF*DLISWI
Trigger: GATCCAGCTTATCAGATCCCAGAAACCTGGCAAACC...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTCTGAGAAGGTATTTTaGTATTGGCAGAAGAAGCTA +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLSEKVF*YWQKKL
Trigger: TAGCTTCTTCTGCCAATATCAAAATACCTTCTCAGA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTGTGGCAATTGGCTATaGTTCACAGATGTGTTTCCA +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSCGNWL*FTDVFP
Trigger: TGGAAACACATCTGTGAATCATAGCCAATTGCCACA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp AGTGTTGCCGGTGACATTTCAAGAGCTAGACATGAACTGCTAGCTTCAGCTTTAAGCCAGTACAGACAATaGGTTCCACATTTAGAAATT +
Preference number: 2 (lower is better)
Translates to: SVAGDISRARHELLASALSQYRQ*VPHLEI
Trigger: AATTTCTAAATGTGGAACTCATTGTCTGTACTGGCT...TAAAGCTGAAGCTAGCAGTTCATGTCTAGCTCTTGAAATGTCACCGGCAACACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644878.1
3UTR-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGAGATGAAGAAACTGTaGTTTGGATCCATCATGATT +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLEMKKL*FGSIMI
Trigger: AATCATGATGGATCCAAAGCACAGTTTCTTCATCTC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR TCA 90 bp GATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTTCATTTGATAGATCTTCCACCAACACTTaGAGTAAGCAATATATGCCT +
Preference number: 2 (lower is better)
Translates to: DSKKVTSLLATSTSSFDRSSTNT*SKQYMP
Trigger: AGGCATATATTGCTTACTTCAAGTGTTGGTGGAAGA...TCTATCAAATGAAGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTTGTTGATATTTCTATaGAAAGGACCCGTGCTATCC +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSLLIFL*KGPVLS
Trigger: GGATAGCACGGGTCCTTTCCATAGAAATATCAACAA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGTTCTGTTTTCTCTGTaGCAATTGGCTATGATTCAC +
Preference number: 2 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSVLFSL*QLAMIH
Trigger: GTGAATCATAGCCAATTGCCACAGAGAAAACAGAAC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGAAGAAACTGTGCTTTaGATCCATCATGATTTTACT +
Preference number: 2 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLEETVL*IHHDFT
Trigger: AGTAAAATCATGATGGATCCAAAGCACAGTTTCTTC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CCA 90 bp TCTAAATGTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGAATGAGGAAAATAATGTaGGCTCACCTTAGGAAGTTG +
Preference number: 2 (lower is better)
Translates to: SKCPFQLSDSQGLLYRRGMRKIM*AHLRKL
Trigger: CAACTTCCTAAGGTGAGCCCACATTATTTTCCTCAT...TCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGACATTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR GCA 90 bp TCTAAATGTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGACAAATGGTTAGTAAGTaGAATGATAGCAAGAAAGTG +
Preference number: 2 (lower is better)
Translates to: SKCPFQLSDSQGLLYRRGQMVSK*NDSKKV
Trigger: CACTTTCTTGCTATCATTGCACTTACTAACCATTTG...TCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGACATTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR CCA 90 bp TCTAAATGTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGAACTACATGCTGCAAATaGTTAGTAAGTGCAATGATA +
Preference number: 2 (lower is better)
Translates to: SKCPFQLSDSQGLLYRRGTTCCK*LVSAMI
Trigger: TATCATTGCACTTACTAACCATTTGCAGCATGTAGT...TCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGACATTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR TCA 90 bp CTGTATACAACAACGATAATTGCGACTATTACACATATTAAGCCCCCACAATATTTTATAAATGAAAACTaGAGCTCAAGGAGGCCACAC +
Preference number: 2 (lower is better)
Translates to: LYTTTIIATITHIKPPQYFINEN*SSRRPH
Trigger: GTGTGGCCTCCTTGAGCTTCAGTTTTCATTTATAAA...ATATTGTGGGGGCTTAATATGTGTAATAGTCGCAATTATCGTTGTTGTATACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR CCA 72 bp ATGCCAATTTCCTTTTCTGGCAGGGCCTGGACGGCATaGAAGCCAGGGACAGCATGGGCCAGGTGCGCAGCA +
Preference number: 3 (lower is better)
Translates to: MPISFSGRAWTA*KPGTAWARCAA
Trigger: TGCTGCGCACCTGGCCCATGCTGTCCCTGGCTTCCATGCCGTCCAGGCCCTGCCAGAAAAGGAAATTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGTCTTAGGGGAGTGGTaGAGTCCTTCTGCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHVLGEW*SPSAAG
Trigger: CCCCGCTGCAGAAGGACTCAACCACTCCCCTAAGAC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp GAAAGGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCGTGAACTTTAGAGGTTaGCCAGGTTTCTGGGATCTG +
Preference number: 3 (lower is better)
Translates to: ERPADASPNEDLCTLGLGVNFRG*PGFWDL
Trigger: CAGATCCCAGAAACCTGGCAAACCTCTAAAGTTCAC...GCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR GCA 72 bp CCATTACAGGCTACAGTTGAATCAGGCAGGAGCAGCTaGTGGAGAGCACCCAGCCGACAGACCTGCATTCCA +
Preference number: 3 (lower is better)
Translates to: PLQATVESGRSS*WRAPSRQTCIP
Trigger: TGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGGCCTCACCGGAGGCTaGGTTCTGTTTTCTCTGTGG +
Preference number: 3 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHGLTGG*VLFSLW
Trigger: CCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp GCTGAACATCGTCACTATGCTAGGCAAGGATCCCAGTaGGCAAGGAAAGGCCTGCAGATGCCTCTCCCAACG +
Preference number: 3 (lower is better)
Translates to: AEHRHYARQGSQ*ARKGLQMPLPT
Trigger: CGTTGGGAGAGGCATCTGCAGGCCTTTCCTTGCTCACTGGGATCCTTGCCTAGCATAGTGACGATGTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CCA 72 bp CTGACTGACCCCAAACATGCTGAGCCCAGATCAGGCTaGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCT +
Preference number: 3 (lower is better)
Translates to: LTDPKHAEPRSG*PAERWTVSIIS
Trigger: AGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTCAGCATGTTTGGGGTCAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGGTCTTAGGGGAGTGGTaGAGTCCTTCTGCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKVLGEW*SPSAAG
Trigger: CCCCGCTGCAGAAGGACTCAACCACTCCCCTAAGAC...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTACCTCACCAGTTCTCCTaGTTAAACATCTCCAGGGCA +
Preference number: 3 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVPHQFS*LNISRA
Trigger: TGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGG...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp GGGCCAGACAATGAATGTTCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCGCCAAGGGCTGGCCTTaGTTCTTTCATTGGCCATCT +
Preference number: 3 (lower is better)
Translates to: GPDNECSSQTLMESLGQSAKGWP*FFHWPS
Trigger: AGATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGC...GCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGAACATTCATTGTCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 72 bp CAGCAGCAGCGCAGCATTCCTGGCACTGCAACAAACTaGGAATGTGTCTCAAGTGACTTTCCAGTCTGGCCC +
Preference number: 3 (lower is better)
Translates to: QQQRSIPGTATN*ECVSSDFPVWP
Trigger: GGGCCAGACTGGAAAGTCACTTGAGACACATTCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp AGTCCTTGGAATTCTGCAGACTTCTCTGGGGTGGAGTaGCCTCACCGGAGGCTTGGTTCTGTTTTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: SPWNSADFSGVE*PHRRLGSVFSV
Trigger: CACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTACATTCCAGAAGCAGCTaGGAGAAACTGGGAAGACAT +
Preference number: 3 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVHSRSS*EKLGRH
Trigger: ATGTCTTCCCAGTTTCTCCAAGCTGCTTCTGGAATG...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACATAGAAGGGGGATTGTaGAAGGTAAGGGCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHIEGGL*KVRACG
Trigger: GCCACAGGCCCTTACCTTCAACAATCCCCCTTCTAT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAACTATAGAAGGGGGATaGTTGAAGGTAAGGGCCTGT +
Preference number: 3 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVTIEGG*LKVRAC
Trigger: ACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp ACCGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTaGGGCGAGTCACAGAAGTACTTACCAAATACTCAC +
Preference number: 3 (lower is better)
Translates to: TVQLRWPLASGN*GESQKYLPNTH
Trigger: GTGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp GAAAGCAGCAAGGGGGTAAGGATGCACACGGAGATCTaGCGTTCGCAGGGACTTCCATGCTCATGTTCTGAA +
Preference number: 3 (lower is better)
Translates to: ESSKGVRMHTEI*RSQGLPCSCSE
Trigger: TTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCTCCGTGTGCATCCTTACCCCCTTGCTGCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CCA 72 bp CATGCTGAGCCCAGATCAGGCTGGCCGGCCGAAAGGTaGACTGTGTCTATCATTTCTGCTAGATTCCTATGT +
Preference number: 3 (lower is better)
Translates to: HAEPRSGWPAER*TVSIISARFLC
Trigger: ACATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTCAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp ACAGCCCAGATTAAGTTTTGGCATCCGAAGCCAAACTaGAGGCCTGACTTGGCTTCCCCTTCGCTCTTTGTG +
Preference number: 3 (lower is better)
Translates to: TAQIKFWHPKPN*RPDLASPSLFV
Trigger: CACAAAGAGCGAAGGGGAAGCCAAGTCAGGCCTCCAGTTTGGCTTCGGATGCCAAAACTTAATCTGGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CAA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGGACCCCGTGGGTATTTaGGCATCAACACTGCTCCCC +
Preference number: 3 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSDPVGI*ASTLLP
Trigger: GGGGAGCAGTGTTGATGCCAAAATACCCACGGGGTC...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAGACATTTCAGCTCATTaGCTTAGTGCTAGGTCACTC +
Preference number: 3 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVDISAH*LSARSL
Trigger: GAGTGACCTAGCACTAAGCAAATGAGCTGAAATGTC...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp GGGCCAGACAATGAATGTTCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCTTGGCCATCTTCTTTTaGATCTCCAGCTTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: GPDNECSSQTLMESLGQSLAIFF*ISSFSG
Trigger: CCCAGAGAAGCTGGAGATCAAAAAGAAGATGGCCAA...GCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGAACATTCATTGTCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CAA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGGGGCTTTCCAGCACTaGGGAGCCTCACCCTTTACC +
Preference number: 3 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLGAFQH*GASPFT
Trigger: GGTAAAGGGTGAGGCTCCCAAGTGCTGGAAAGCCCC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp GCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGGCCTTTGTTCTTTCATaGGCCATCTTCTTTTTGATC +
Preference number: 3 (lower is better)
Translates to: AKLSWRAWARATLLPGMEAFVLS*AIFFLI
Trigger: GATCAAAAAGAAGATGGCCAATGAAAGAACAAAGGC...CTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 72 bp CATTTCCTTTTTCCAAGGAGGATGACACCAGCATCTTaGTTCACCGTGCAGTTGAGATGGCCCCTGGCCAGT +
Preference number: 3 (lower is better)
Translates to: HFLFPRRMTPAS*FTVQLRWPLAS
Trigger: ACTGGCCAGGGGCCATCTCAACTGCACGGTGAATCAAGATGCTGGTGTCATCCTCCTTGGAAAAAGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp CACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTaGCAAATGGATTTTCTCACCGGGCGTTCACTGGGA +
Preference number: 3 (lower is better)
Translates to: HYRRGIVEGKGL*QMDFLTGRSLG
Trigger: TCCCAGTGAACGCCCGGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp TTGATTCACCGTGCAGTTGAGATGGCCCCTGGCCAGTaGGAATTGAGGCGAGTCACAGAAGTACTTACCAAA +
Preference number: 3 (lower is better)
Translates to: LIHRAVEMAPGQ*ELRRVTEVLTK
Trigger: TTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACGGTGAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp CTATCTGATACTAGGCTGACGAGGGTCAGGAAAGAATaGGGGAAGAAGTGCTCATTGACAGAGCTTAGGGGG +
Preference number: 3 (lower is better)
Translates to: LSDTRLTRVRKE*GKKCSLTELRG
Trigger: CCCCCTAAGCTCTGTCAATGAGCACTTCTTCCCCCATTCTTTCCTGACCCTCGTCAGCCTAGTATCAGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTATTTTCTCTGTGGCAATaGGCTATGATTCACAGATGT +
Preference number: 3 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVFSLWQ*AMIHRC
Trigger: ACATCTGTGAATCATAGCCAATTGCCACAGAGAAAA...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTATGCTTTCTGAGCGATTaGTATTCATTCAGGACCAAT +
Preference number: 3 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVCFLSD*YSFRTN
Trigger: ATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCA...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp TGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCCCATTTCTTCTGCTaGCTTCTTCCTCTACTCCAT +
Preference number: 3 (lower is better)
Translates to: CSREPTGVAQKIRIIAVLPHFFC*LLPLLH
Trigger: ATGGAGTAGAGGAAGAAGCAAGCAGAAGAAATGGGG...CAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
3UTR CCA 72 bp TGGTGTGGCCTTTTTCTGATAAGATCAAGACTTCACTaGCCCCACCAGCACAAGAAGGGAATGCTGAGGACA +
Preference number: 3 (lower is better)
Translates to: WCGLFLIRSRLH*PHQHKKGMLRT
Trigger: TGTCCTCAGCATTCCCTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCTTATCAGAAAAAGGCCACACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp CCTGGAAAGTCAGCCTGGGAAAACTCGCACTTGGTGTaGCCTTTTTCTGATAAGATCAAGACTTCACTGGCC +
Preference number: 3 (lower is better)
Translates to: PGKSAWENSHLV*PFSDKIKTSLA
Trigger: GGCCAGTGAAGTCTTGATCTTATCAGAAAAAGGCCACACCAAGTGCGAGTTTTCCCAGGCTGACTTTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGAAGGTATTTTGATATaGGCAGAAGAAGCTAGTGGC +
Preference number: 3 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHEGILI*AEEASG
Trigger: GCCACTAGCTTCTTCTGCCAATATCAAAATACCTTC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCATAGAAGGGGGATTGTaGAAGGTAAGGGCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTIEGGL*KVRACG
Trigger: GCCACAGGCCCTTACCTTCAACAATCCCCCTTCTAT...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp CGAAAGTATCCTGACACTAAGCTGGGAGATGCATACTaGCAAAGGGGAAGAATGTGTGTTGATGAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: RKYPDTKLGDAY*QRGRMCVDEEG
Trigger: GCCCTCCTCATCAACACACATTCTTCCCCTTTGTCAGTATGCATCTCCCAGCTTAGTGTCAGGATACTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR GCA 72 bp CAGGGAAGTAAACTGCCTCTTAGGTCATCCTGCCTGTaGTGTAAATTCGGGGAAGGATTTCTGAGTACAGCA +
Preference number: 3 (lower is better)
Translates to: QGSKLPLRSSCL*CKFGEGFLSTA
Trigger: TGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAGGCAGGATGACCTAAGAGGCAGTTTACTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR GCA 72 bp AACTCTTTACAAGATAGACCCGCAGCTTCCTGCCTCTaGCTCTCTCTTAGTTCTATTTGTCCAGGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: NSLQDRPAASCL*LSLSSICPGLA
Trigger: AGCAAGGCCTGGACAAATAGAACTAAGAGAGAGGCAGAGGCAGGAAGCTGCGGGTCTATCTTGTAAAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR GCA 72 bp AGTTTAATTGAACTGCAGCAGGGAACCGACGGGCGTTaGCCAGAAAATCAGAATAATAGCAGTGTTGCCGGT +
Preference number: 3 (lower is better)
Translates to: SLIELQQGTDGR*PENQNNSSVAG
Trigger: ACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCAGTTCAATTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
3UTR CCA 72 bp AGTGGCCTCACCGGAGGCTTGGTTCTGTTTTCTCTGTaGCAATTGGCTATGATTCACAGATGTGTTTCCAGA +
Preference number: 3 (lower is better)
Translates to: SGLTGGLVLFSL*QLAMIHRCVSR
Trigger: TCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp AAGGGCCTGGAAAGTCAGCCTGGGAAAACTCGCACTTaGTGTGGCCTTTTTCTGATAAGATCAAGACTTCAC +
Preference number: 3 (lower is better)
Translates to: KGLESQPGKTRT*CGLFLIRSRLH
Trigger: GTGAAGTCTTGATCTTATCAGAAAAAGGCCACACCAAGTGCGAGTTTTCCCAGGCTGACTTTCCAGGCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGAGGGTAGAAAAGGAGTaGGTGTTGCATGTTTCTAAA +
Preference number: 3 (lower is better)
Translates to: PANTIEGGLLKVRACGKWRVEKE*VLHVSK
Trigger: TTTAGAAACATGCAACACCAACTCCTTTTCTACCCT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGACTGGGAAGACATTTTaGACCCATTCTTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: PANTIEGGLLKVRACGKWTGKTF*THSWVF
Trigger: AAAAACCCAAGAATGGGTCAAAAATGTCTTCCCAGT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp CAGGTAGGTCCAGGGATTGCTTGGGTTAGAATTTGTTaGTATTTCTATGGAAAGGACCCGTGCTATCCTGCC +
Preference number: 3 (lower is better)
Translates to: QVGPGIAWVRIC*YFYGKDPCYPA
Trigger: GGCAGGATAGCACGGGTCCTTTCCATAGAAATATCAACAAATTCTAACCCAAGCAATCCCTGGACCTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp GCCTGTGGCAAATGGATTTTCTCACCGGGCGTTCACTaGGAGAAGGAGTTGATGAGTGCATTTTTCTTAGTT +
Preference number: 3 (lower is better)
Translates to: ACGKWIFSPGVH*EKELMSAFFLV
Trigger: AACTAAGAAAAATGCACTCATCAACTCCTTCTCCCAGTGAACGCCCGGTGAGAAAATCCATTTGCCACAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CCA 72 bp AGCTTCACAGAAGCCTGTCACAGAAACAGCAGAAAGTaGTCCAGGTTGAAGTGGGAGATTGTTTTGGATGAC +
Preference number: 3 (lower is better)
Translates to: SFTEACHRNSRK*SRLKWEIVLDD
Trigger: GTCATCCAAAACAATCTCCCACTTCAACCTGGACCACTTTCTGCTGTTTCTGTGACAGGCTTCTGTGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR CAA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAAGACTGAAGCTGTGTTaGCCAGACACCCAAGTCCAT +
Preference number: 3 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERRLKLC*PDTQVH
Trigger: ATGGACTTGGGTGTCTGGCAAACACAGCTTCAGTCT...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAATTTTTCACCTGGCAGTaGAGTCAGATTGTAGGAAAA +
Preference number: 3 (lower is better)
Translates to: HLGASPFTSEHYRRGIVEFFTWQ*SQIVGK
Trigger: TTTTCCTACAATCTGACTCAACTGCCAGGTGAAAAA...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGATCCAATCCGAGTCCTaGGAATTCTGCAGACTTCTC +
Preference number: 3 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLIQSES*EFCRLL
Trigger: GAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGAT...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAATCCAATCCGAGTCCTaGGAATTCTGCAGACTTCTC +
Preference number: 3 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLIQSES*EFCRLL
Trigger: GAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGAT...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTCTCCCTGAGTTGTTCTaGGGACACCTAAGGACCTCA +
Preference number: 3 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSLPELF*GHLRTS
Trigger: TGAGGTCCTTAGGTGTCCCAAGAACAACTCAGGGAG...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTAACTGGAGGCCTGACTaGGCTTCCCCTTCGCTCTTT +
Preference number: 3 (lower is better)
Translates to: KYILLLMLVFPFLFVSRANWRPD*ASPSLF
Trigger: AAAGAGCGAAGGGGAAGCCAAGTCAGGCCTCCAGTT...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CAA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTCCCCATTTCTTCTGCTaGCTTCTTCCTCTACTCCAT +
Preference number: 3 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTPHFFC*LLPLLH
Trigger: ATGGAGTAGAGGAAGAAGCAAGCAGAAGAAATGGGG...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
3UTR-3UTR CAA 90 bp CAGGGAGGCATGCTTGGGCTCATTGTAAAGAACAATGATTTAATAATCAGAGCTTCAGGGTCCAGGTTCTaGACCAACAGGTGGTACTGT +
Preference number: 3 (lower is better)
Translates to: QGGMLGLIVKNNDLIIRASGSRF*TNRWYC
Trigger: ACAGTACCACCTGTTGGTCAAGAACCTGGACCCTGA...AGCTCTGATTATTAAATCATTGTTCTTTACAATGAGCCCAAGCATGCCTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR CAA 90 bp CAGGGAGGCATGCTTGGGCTCATTGTAAAGAACAATGATTTAATAATCAGAGCTGCTCACCTTAGGAAGTaGCTGGAGGAAGTGAGAAGG +
Preference number: 3 (lower is better)
Translates to: QGGMLGLIVKNNDLIIRAAHLRK*LEEVRR
Trigger: CCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGC...AGCTCTGATTATTAAATCATTGTTCTTTACAATGAGCCCAAGCATGCCTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR TCA 72 bp ATGAGGCTTGATTATAAAAAGTGCGCCTCAAGGCAGTaGTACAGAGGAGTCTATGAAGCTGGAGTCTTAGGG +
Preference number: 3 (lower is better)
Translates to: MRLDYKKCASRQ*YRGVYEAGVLG
Trigger: CCCTAAGACTCCAGCTTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCACTTTTTATAATCAAGCCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp GAGGCTTGGTTCTGTTTTCTCTGTGGCAATTGGCTATaGTTCACAGATGTGTTTCCAGAACAGCCCAACTGT +
Preference number: 3 (lower is better)
Translates to: EAWFCFLCGNWL*FTDVFPEQPNC
Trigger: ACAGTTGGGCTGTTCTGGAAACACATCTGTGAATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp GGCCAAACTCAGAAGCAGGCATTGCTGACTAGACAGTaGATTCAACTCAGTCATTCTGAGTTTGACTCTTGC +
Preference number: 3 (lower is better)
Translates to: GQTQKQALLTRQ*IQLSHSEFDSC
Trigger: GCAAGAGTCAAACTCAGAATGACTGAGTTGAATTCACTGTCTAGTCAGCAATGCCTGCTTCTGAGTTTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp GGTCATTTCTTCACACATTGGCTTGACTTTGGGAGATaGGAACTAGGAGGGGGCCAGACAATGAATGTTCAA +
Preference number: 3 (lower is better)
Translates to: GHFFTHWLDFGR*ELGGGQTMNVQ
Trigger: TTGAACATTCATTGTCTGGCCCCCTCCTAGTTCTCATCTCCCAAAGTCAAGCCAATGTGTGAAGAAATGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CAA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCGAAGGTATTTTGATATaGGCAGAAGAAGCTAGTGGC +
Preference number: 3 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTEGILI*AEEASG
Trigger: GCCACTAGCTTCTTCTGCCAATATCAAAATACCTTC...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTAGACTGAAGCTGTGTTaGCCAGACACCCAAGTCCAT +
Preference number: 3 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSRLKLC*PDTQVH
Trigger: ATGGACTTGGGTGTCTGGCAAACACAGCTTCAGTCT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTACTCAAAAACCACTCATaGGTAAGCACAGTCAAACCC +
Preference number: 3 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLLKNHS*VSTVKP
Trigger: GGGTTTGACTGTGCTTACCAATGAGTGGTTTTTGAG...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGCTAGAAACAGCAATATaGATTTGGTTTGGCCTGTTT +
Preference number: 3 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKLETAI*IWFGLF
Trigger: AAACAGGCCAAACCAAATCAATATTGCTGTTTCTAG...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTCAGTCATTCTGAGTTaGACTCTTGCTTCTGCCTTC +
Preference number: 3 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLSVILS*TLASAF
Trigger: GAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp AGATCTGACGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTTTCATCTCCTGATCTTTGCATaGTATCACTCTGACACAGTG +
Preference number: 3 (lower is better)
Translates to: RSDVRRDFHAHVLNLLFHLLIFA*YHSDTV
Trigger: CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAG...ATGAAAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 72 bp AAAGTGGTCCAGGTTGAAGTGGGAGATTGTTTTGGATaGCCTCTAAATGTCCTTTCCAACTCTCAGATTCCC +
Preference number: 3 (lower is better)
Translates to: KVVQVEVGDCFG*PLNVLSNSQIP
Trigger: GGGAATCTGAGAGTTGGAAAGGACATTTAGAGGTCATCCAAAACAATCTCCCACTTCAACCTGGACCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR TCA 72 bp AGCTTAGGGGGATACAACTACTGTCTTCAAATGAGGTaGAGGCAAGCAAAGCTGTTCTCTGTTACTCTAGAG +
Preference number: 3 (lower is better)
Translates to: SLGGYNYCLQMR*RQAKLFSVTLE
Trigger: CTCTAGAGTAACAGAGAACAGCTTTGCTTGCCTTCACCTCATTTGAAGACAGTAGTTGTATCCCCCTAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR CCA 72 bp TCGCTCTTTGTGAACTTTAGAGGTTTGCCAGGTTTCTaGGATCTGATAAGCTGGATCAGCAGAAATCCAAAG +
Preference number: 3 (lower is better)
Translates to: SLFVNFRGLPGF*DLISWISRNPK
Trigger: CTTTGGATTTCTGCTGATCCAGCTTATCAGATCCCAGAAACCTGGCAAACCTCTAAAGTTCACAAAGAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR-3UTR CAA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATGAAAAGGAGTTGGTGTaGCATGTTTCTAAAGCATCT +
Preference number: 3 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDEKELV*HVSKAS
Trigger: AGATGCTTTAGAAACATGCAACACCAACTCCTTTTC...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCTTTTCTCTGTGGCAATaGGCTATGATTCACAGATGT +
Preference number: 3 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTFSLWQ*AMIHRC
Trigger: ACATCTGTGAATCATAGCCAATTGCCACAGAGAAAA...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTAGAAACAGCAATATaGATTTGGTTTGGCCTGTTT +
Preference number: 3 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSLETAI*IWFGLF
Trigger: AAACAGGCCAAACCAAATCAATATTGCTGTTTCTAG...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGTGCTTTCTGAGCGATTaGTATTCATTCAGGACCAAT +
Preference number: 3 (lower is better)
Translates to: QALLISGTLIWSRSISGMCFLSD*YSFRTN
Trigger: ATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCA...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp GATAAAACTAGTTTGGGATCGTGTGGCCAAATAAGCTaGTGGACTCTGTTTCCGACATTTCAGCTCATTTGC +
Preference number: 3 (lower is better)
Translates to: DKTSLGSCGQIS*WTLFPTFQLIC
Trigger: GCAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGATCCCAAACTAGTTTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp AATTTAAGGCAGGTGGGAATTGAGGAAATCACAGGATaGAGCCCAAGGCTTGGGAGATTCATTTGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: NLRQVGIEEITG*SPRLGRFICLL
Trigger: AAGCAAACAAATGAATCTCCCAAGCCTTGGGCTTCATCCTGTGATTTCCTCAATTCCCACCTGCCTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CCA 72 bp TTTGTCCAGGCCTTGCTGATTTCTGGGACTCTCATATaGTCAAGATCTATTTCAGGCATGACCTATCTTATG +
Preference number: 3 (lower is better)
Translates to: FVQALLISGTLI*SRSISGMTYLM
Trigger: CATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGACTGGGAAGACATTTTaGACCCATTCTTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLTGKTF*THSWVF
Trigger: AAAAACCCAAGAATGGGTCAAAAATGTCTTCCCAGT...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTTTTTCACCTGGCAGTaGAGTCAGATTGTAGGAAAA +
Preference number: 3 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLFFTWQ*SQIVGK
Trigger: TTTTCCTACAATCTGACTCAACTGCCAGGTGAAAAA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTGATGAAGCCCAAGGCTaGGGAGATTCATTTGTTTGC +
Preference number: 3 (lower is better)
Translates to: KYILLLMLVFPFLFVSRADEAQG*GDSFVC
Trigger: GCAAACAAATGAATCTCCCAAGCCTTGGGCTTCATC...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR TCA 72 bp CTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATaGCACTACATGCTGCAAATGGTTAGTAAGTGCAAT +
Preference number: 3 (lower is better)
Translates to: LSDSQGLLYRRG*HYMLQMVSKCN
Trigger: ATTGCACTTACTAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR GCA 72 bp CCCAGGGTTTGTTATATAGGAGAGGATGACACTACATaGTGCAAATGGTTAGTAAGTGCAATGATAGCAAGA +
Preference number: 3 (lower is better)
Translates to: PRVCYIGEDDTT*CKWLVSAMIAR
Trigger: TCTTGCTATCATTGCACTTACTAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR GCA 72 bp CATCACACTTTAAAAAGTTCCTTTCCTCACAGAGTTTaGTGTCTGGCTGAGACAGTAAGATATAAGCATGCG +
Preference number: 3 (lower is better)
Translates to: HHTLKSSFPHRV*CLAETVRYKHA
Trigger: CGCATGCTTATATCTTACTGTCTCAGCCAGACAGCAAACTCTGTGAGGAAAGGAACTTTTTAAAGTGTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR CCA 72 bp TCTCTTAGTTCTATTTGTCCAGGCCTTGCTGATTTCTaGGACTCTCATATGGTCAAGATCTATTTCAGGCAT +
Preference number: 3 (lower is better)
Translates to: SLSSICPGLADF*DSHMVKIYFRH
Trigger: ATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAGAACTAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTCTTCTGTTGTTTCATTaGATAAGGGCCTGGAAAGTC +
Preference number: 3 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSLLLFH*IRAWKV
Trigger: GACTTTCCAGGCCCTTATCAAATGAAACAACAGAAG...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR-3UTR CAA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTAGGGTAGAAAAGGAGTaGGTGTTGCATGTTTCTAAA +
Preference number: 3 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSRVEKE*VLHVSK
Trigger: TTTAGAAACATGCAACACCAACTCCTTTTCTACCCT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp ATGCTTTCTGAGCGATTTGTATTCATTCAGGACCAATaGAAAGGAAGCCTCCTACCCTATAGCTGTATAGTT +
Preference number: 3 (lower is better)
Translates to: MLSERFVFIQDQ*KGSLLPYSCIV
Trigger: AACTATACAGCTATAGGGTAGGAGGCTTCCTTTTCATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR TCA 72 bp GGGAAATCCTATGAGGAAGAGGCCTTTGGAGTGATATaGCTGTATACAACAACGATAATTGCGACTATTACA +
Preference number: 3 (lower is better)
Translates to: GKSYEEEAFGVI*LYTTTIIATIT
Trigger: TGTAATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCCTCATAGGATTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR-3UTR CAA 90 bp ATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTACCTCCACCTCTTCATTaGATAGATGAGGAAAATAAT +
Preference number: 3 (lower is better)
Translates to: IPRVCYIGEDDTTCCKWLPPPLH*IDEENN
Trigger: ATTATTTTCCTCATCTATCAAATGAAGAGGTGGAGG...TAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR GCA 72 bp AGGGTTTGTTATATAGGAGAGGATGACACTACATGCTaGAAATGGTTAGTAAGTGCAATGATAGCAAGAAAG +
Preference number: 3 (lower is better)
Translates to: RVCYIGEDDTTC*KWLVSAMIARK
Trigger: CTTTCTTGCTATCATTGCACTTACTAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR TCA 72 bp AGACTGGAACACAAATTGGTAATTGGTTCAGATTCATaGGGAAAACACTCAGCTGTATCTTCATTAAAAGGC +
Preference number: 3 (lower is better)
Translates to: RLEHKLVIGSDS*GKHSAVSSLKG
Trigger: GCCTTTTAATGAAGATACAGCTGAGTGTTTTCCTCATGAATCTGAACCAATTACCAATTTGTGTTCCAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp GGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTGCTGGAAGGGCGGGTGCGTaGCGGGGGCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GLQMPLPTKTCAPWALAAGRAGA*RGLGCA
Trigger: TGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCC...AGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp GCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGGTCAGGAAGGGCGGGTaGGTGCCGGGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: AKLSWRAWARATLLPGMEVRKGG*VPGARL
Trigger: CAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGAC...CTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp CTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCCTGGGCCAGCACTCTaGGCTCCTGCCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LSWRAWARATLLPGMEINPGPAL*APAAAQ
Trigger: CTGGGCAGCGGCAGGAGCGCAGAGTGCTGGCCCAGG...GTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp GCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGCCCAACGAAGACCTGTaGACCCTGGGCCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: AKLSWRAWARATLLPGMEPNEDL*TLGLGC
Trigger: GCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGG...CTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAGGGCATAGGCGTTCTTaGGGTACCGCCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVGHRRS*GTATGL
Trigger: CAGGCCTGTGGCGGTACCTCAAGAACGCCTATGCCC...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGGAAGGGCGGGTGCGTaGCGGGGGCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QGTDGRCPENQNNSSVAGGRAGA*RGLGCA
Trigger: TGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCC...ACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATCTGCGCTCCTGCCGCTaGCCAGCGGGGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYLRSCR*PAGLLF
Trigger: GAAGAGGAGCCCCGCTGGGCAGCGGCAGGAGCGCAG...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR CCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGACCGTGCAGTTGAGATaGCCCCTGGCCAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQTVQLR*PLASGN
Trigger: ATTCCCACTGGCCAGGGGCCATCTCAACTGCACGGT...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATAGTCTGTCATGCCGTTaGCGCCCGGGGCTACCGTCC +
Preference number: 4 (lower is better)
Translates to: SSQTLMESLGQSNSASRDSLSCR*RPGLPS
Trigger: GGACGGTAGCCCCGGGCGCCAACGGCATGACAGACT...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GGCCAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCTGAAAGCGAGCCACGCTCTTCACGTCCCCGTTaGAGGTCAGGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GQSNSASRDGDKPESEPRSSRPR*RSGRAG
Trigger: ACCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGA...GCGTGGCTCGCTTTCAGGTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCCTGCGCTCCTGCCGCTaGCCAGCGGGGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAILRSCR*PAGLLF
Trigger: GAAGAGGAGCCCCGCTGGGCAGCGGCAGGAGCGCAG...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp CAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTTCGCCGAGTCTGTCATaGCGTTGGCGCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: QGTDGRCPENQNNSSVAGSPSLS*RWRPGL
Trigger: TAGCCCCGGGCGCCAACGGCATGACAGACTCGGCGA...ACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGTCTGCTGCGCAGAGTTaGTGGTCCTGGGTTGATGAA +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQSAAQS*WSWVDE
Trigger: TTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGA...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR GCA 90 bp CCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTGTCAGGAAGGGCGGGTaGGTGCCGGGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: PTGVAQKIRIIAVLPVTFVRKGG*VPGARL
Trigger: CAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGAC...AAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTTCAGGCAGGAGCAGCTaGTGGAGAGCACCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGSGRSS*WRAPSR
Trigger: TCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGA...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp GGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTGCTGATCAGTGTCCCAGATaGTCACATGAAAAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: GLQMPLPTKTCAPWALAADQCPR*SHEKER
Trigger: TCGCTCCTTTTCATGTGAGCATCTGGGACACTGATC...AGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAGAGCCCAGATCAGGCTaGCCGGCCGAAAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSEPRSG*PAERWT
Trigger: AGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTC...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACAGGGCCTGGACGGCATaGAAGCCAGGGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHRAWTA*KPGTAW
Trigger: CCATGCTGTCCCTGGCTTCCATGCCGTCCAGGCCCT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAATGGCCCCTGGCCAGTaGGAATTGAGGCGAGTCACA +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVMAPGQ*ELRRVT
Trigger: TGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCAT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp GGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTGCTGGTTTGCCAGGTTTCTaGGATCTGATAAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: GLQMPLPTKTCAPWALAAGLPGF*DLISWI
Trigger: GATCCAGCTTATCAGATCCCAGAAACCTGGCAAACC...AGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACTCTTCACGTCCCCGTTaGAGGTCAGGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHSSRPR*RSGRAG
Trigger: ACCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGA...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGTGCTCAGGATCGGCTaGGGCGTTTGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHVLRIG*GVWRHQ
Trigger: CTGATGTCGCCAAACGCCTCAGCCGATCCTGAGCAC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGTCACCACACTGTTGCTaGGACATGATGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQSPHCC*DMMCCT
Trigger: TGTGCAGCACATCATGTCTCAGCAACAGTGTGGTGA...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGATTCACCGTGCAGTTaGGATGGCCCCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHDSPCS*DGPWPV
Trigger: CACTGGCCAGGGGCCATCTCAACTGCACGGTGAATC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGGAGGAAATCACAGGATaGAGCCCAAGGCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: AKLSWRAWARATLLPGMEEEITG*SPRLGR
Trigger: TCTCCCAAGCCTTGGGCTTCATCCTGTGATTTCCTC...CTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GGGCCAGACAATGAATGTTCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAGGCAAGGATCCCAGTaGGCAAGGAAAGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GPDNECSSQTLMESLGQSRQGSQ*ARKGLQ
Trigger: CTGCAGGCCTTTCCTTGCTCACTGGGATCCTTGCCT...GCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGAACATTCATTGTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTCCCCATCCAGGAACTTaGGCCGGGACCCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGPHPGT*AGTPCL
Trigger: AAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGG...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGTTGTGGGGTCCCAACTaGAGACCCTCCCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWLWGPN*RPSRAP
Trigger: GGGAGCACGGGAGGGTCTGCAGTTGGGACCCCACAA...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAAGACCCGCAGCTTCCTaGCTCTGCCTCTCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVRPAAS*LCLSLS
Trigger: ACTAAGAGAGAGGCAGAGGCAGGAAGCTGCGGGTCT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATCCTGGGCCAGCACTCTaGGCTCCTGCCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDPGPAL*APAAAQ
Trigger: CTGGGCAGCGGCAGGAGCGCAGAGTGCTGGCCCAGG...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR GCA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACGGGAGGCGCCACCTCTaGAGCACCTGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDGRRHL*STWAST
Trigger: AGTGCTGGCCCAGGTGCTGCAGAGGTGGCGCCTCCC...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp ATAATGTGGGCTCACCTTAGGAAGTTGCTGGAGGAAGTGAGAAGGTGGGTCTGTTCGCCGAGTCTGTCATaGCGTTGGCGCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: IMWAHLRKLLEEVRRWVCSPSLS*RWRPGL
Trigger: TAGCCCCGGGCGCCAACGGCATGACAGACTCGGCGA...ACAGACCCACCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGCCCACATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp GGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTGCTTGTAGGCAGAAAACTTaGAAAAGATGTCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: GLQMPLPTKTCAPWALAACRQKT*KRCRCP
Trigger: CGGGCATCGACATCTTTTCCAAGTTTTCTGCCTACA...AGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGCTTCCCCACAAGTGTTaGCGTCAATCTCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQLPHKC*RQSPLV
Trigger: TACCAGAGGAGATTGACGCCAACACTTGTGGGGAAG...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATGAGCCCAGATCAGGCTaGCCGGCCGAAAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYEPRSG*PAERWT
Trigger: AGTCCACCTTTCGGCCGGCCAGCCTGATCTGGGCTC...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGCAGACTTCTCTGGGGTaGAGTGGCCTCACCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWQTSLG*SGLTGG
Trigger: GCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTG...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TTGAACTGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAAGTCTGTCATGCCGTTaGCGCCCGGGGCTACCGTCC +
Preference number: 4 (lower is better)
Translates to: LNCSREPTGVAQKIRIIASLSCR*RPGLPS
Trigger: GGACGGTAGCCCCGGGCGCCAACGGCATGACAGACT...TGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCAGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
3UTR CAA 72 bp ATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTaGGCTGCTGAGCTGGTCATTTCTTCACACATTGGC +
Preference number: 4 (lower is better)
Translates to: MPLPTKTCAPWA*AAELVISSHIG
Trigger: GCCAATGTGTGAAGAAATGACCAGCTCAGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGGGGCATAGGCGTTCTTaGGGTACCGCCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKGHRRS*GTATGL
Trigger: CAGGCCTGTGGCGGTACCTCAAGAACGCCTATGCCC...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGATGACACCAGCATCTTaGTTCACCGTGCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQMTPAS*FTVQLR
Trigger: TCTCAACTGCACGGTGAATCAAGATGCTGGTGTCAT...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAAGGGACAGAGGATGCTaGACCACCTTGCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVRDRGC*TTLQRN
Trigger: ATTCCTCTGCAAGGTGGTGCAGCATCCTCTGTCCCT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR GCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTACCCTTCCATTGAGATaGCCCTGTCCTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSTLPLR*PCPPGA
Trigger: AGCCCCAGGAGGACAGGGGCATCTCAATGGAAGGGT...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR GCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGCCCCATCCAGGAACTTaGGCCGGGACCCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWPHPGT*AGTPCL
Trigger: AAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGG...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCCCATCCAGGAACTTaGGCCGGGACCCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: CSREPTGVAQKIRIIAVLPHPGT*AGTPCL
Trigger: AAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGG...CAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp GAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAACCCCATCCAGGAACTTaGGCCGGGACCCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: EGDLGSLLPDFRVQVLDQPHPGT*AGTPCL
Trigger: AAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGG...TTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGTCCCATCCCAGTCACTaGAGTTTAGAATTGCATGCC +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQSHPSH*SLELHA
Trigger: GGCATGCAATTCTAAACTGCAGTGACTGGGATGGGA...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTCCCAGCCGACAGACCTaGATTCCAGAAGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSPSRQT*IPEAAW
Trigger: CCAAGCTGCTTCTGGAATGCAGGTCTGTCGGCTGGG...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTCTGCAGACCCTCCCGTaGTCCCTGAGTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGLQTLP*SLSCSW
Trigger: CCAAGAACAACTCAGGGAGCACGGGAGGGTCTGCAG...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACCTGCAGACCCTCCCGTaGTCCCTGAGTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHLQTLP*SLSCSW
Trigger: CCAAGAACAACTCAGGGAGCACGGGAGGGTCTGCAG...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTCTGCGCTCCTGCCGCTaGCCAGCGGGGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTLRSCR*PAGLLF
Trigger: GAAGAGGAGCCCCGCTGGGCAGCGGCAGGAGCGCAG...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp GTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTCTGCGCTCCTGCCGCTaGCCAGCGGGGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLSNSQIPRVCYIGEDDTLRSCR*PAGLLF
Trigger: GAAGAGGAGCCCCGCTGGGCAGCGGCAGGAGCGCAG...AGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGAGCAAGGAAAGGCCTaGAGATGCCTCTCCCAACGA +
Preference number: 4 (lower is better)
Translates to: SSQTLMESLGQSNSASRDEQGKA*RCLSQR
Trigger: TCGTTGGGAGAGGCATCTGCAGGCCTTTCCTTGCTC...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTCTTCTGCAGCGGGGATaGGGCAAAATGGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSLLQRG*GKMAVL
Trigger: GAGCACAGCCATTTTGCCCCATCCCCGCTGCAGAAG...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAAAAGCCAGGGACAGCATaGGCCAGGTGCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HLGASPFTSEHYRRGIVEKPGTA*ARCAAA
Trigger: TGCTGCTGCGCACCTGGCCCATGCTGTCCCTGGCTT...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTATCACCGGGCGTTCACTaGGAGAAGGAGTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVSPGVH*EKELMS
Trigger: ACTCATCAACTCCTTCTCCCAGTGAACGCCCGGTGA...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGGAAGGTAAGGGCCTGTaGCAAATGGATTTTCTCACC +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQEGKGL*QMDFLT
Trigger: GGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTC...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAACCGTGCAGTTGAGATaGCCCCTGGCCAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSTVQLR*PLASGN
Trigger: ATTCCCACTGGCCAGGGGCCATCTCAACTGCACGGT...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCATGGGCTCTCCAACACTaGCTGACCCCAAACATGCTG +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSWALQH*LTPNML
Trigger: CAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCA...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTTGGGCTCTCCAACACTaGCTGACCCCAAACATGCTG +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGWALQH*LTPNML
Trigger: CAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCA...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp ACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAACAGGTGGCCGGGGGCTAGGTTGTaGAGGTCAGCTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TLGPYYLTSGSRFLTNRWPGARL*RSAGFL
Trigger: AAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGG...CCACCTGTTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGGAAGGGCGGGTGCGTaGCGGGGGCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLGRAGA*RGLGCA
Trigger: TGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAGTCAGGAAGGGCGGGTaGGTGCCGGGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLVRKGG*VPGARL
Trigger: CAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGAC...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGTCAGGAAGGGCGGGTaGGTGCCGGGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLVRKGG*VPGARL
Trigger: CAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGAC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp GTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTGTCAGGAAGGGCGGGTaGGTGCCGGGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: VLSNSQIPRVCYIGEDDTVRKGG*VPGARL
Trigger: CAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGAC...AGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTGACAATGGGGCTGTGTaGAGCAGGTCCTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSDNGAV*SRSCSL
Trigger: AAGCGAACAGGACCTGCTGCACACAGCCCCATTGTC...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTGGGAGGCGCCACCTCTaGAGCACCTGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTGRRHL*STWAST
Trigger: AGTGCTGGCCCAGGTGCTGCAGAGGTGGCGCCTCCC...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp GAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAAGATGGAGCTGGATCTTaGAGGCCCCTGTGGGTAGAG +
Preference number: 4 (lower is better)
Translates to: EGDLGSLLPDFRVQVLDQDGAGS*RPLWVE
Trigger: CTCTACCCACAGGGGCCTGCAAGATCCAGCTCCATC...TTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp CAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCTGAAAGCGAGCCACGCAAGCGATGCCCGCTGTGTTaGATTCCCGGTGTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QSNSASRDGDKPESEPRKRCPLC*IPGVLQ
Trigger: CTGCAAAACACCGGGAATCCAACACAGCGGGCATCG...CTTGCGTGGCTCGCTTTCAGGTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGCTTCTGCAGCGGGGATaGGGCAAAATGGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWLLQRG*GKMAVL
Trigger: GAGCACAGCCATTTTGCCCCATCCCCGCTGCAGAAG...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTGCCAATTTCCTTTTCTaGCAGGGCCTGGACGGCATG +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSANFLF*QGLDGM
Trigger: CATGCCGTCCAGGCCCTGCCAGAAAAGGAAATTGGC...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp GAAAGGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCATGAAGCCCAAGGCTTaGGAGATTCATTTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: ERPADASPNEDLCTLGLGMKPKA*EIHLFA
Trigger: AGCAAACAAATGAATCTCCCAAGCCTTGGGCTTCAT...GCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAAAGGCCTTACTGTGCTaGATGGTGAAGCTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVKALLC*MVKLEG
Trigger: TCCTTCAAGCTTCACCATTCAGCACAGTAAGGCCTT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR TCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTAGGCTGGAGTTCCCATaGTACCAGCAAGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGRLEFP*YQQDEA
Trigger: AGCCTCATCTTGCTGGTATCATGGGAACTCCAGCCT...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGTGTGGCAATTGGCTATaGTTCACAGATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQCGNWL*FTDVFP
Trigger: TGGAAACACATCTGTGAATCATAGCCAATTGCCACA...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGCTGGCCAGTGGGAATTaGGGCGAGTCACAGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWLASGN*GESQKY
Trigger: GTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAG...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGGCCGGGTTAAGGGAATaGCAACAGGTCGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKAGLRE*QQVVGA
Trigger: TGCTCCCACGACCTGTTGTCATTCCCTTAACCCGGC...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR TCA 90 bp CAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACACAGTGTCCCAGATGCTCACATaGAAAGGAGCGAAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: QDRNSGLLIFALYHSDTVSQMLT*KGAKPG
Trigger: TCCCGGCTTCGCTCCTTTTCATGTGAGCATCTGGGA...CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp CAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCTGAAAGCGAGCCACGCAAGGTGGTACTTGTTCCTTaGCCACATGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QSNSASRDGDKPESEPRKVVLVP*PHGAWA
Trigger: TGCCCAAGCTCCATGTGGTCAAGGAACAAGTACCAC...CTTGCGTGGCTCGCTTTCAGGTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGAGCACTCTGACACAGTGTaGCTGAGCTGGAATTATATC +
Preference number: 4 (lower is better)
Translates to: AKLSWRAWARATLLPGMEHSDTV*LSWNYI
Trigger: GATATAATTCCAGCTCAGTCACACTGTGTCAGAGTG...CTCCATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GCTGGATCAGCAGAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTATGCACACGGAGATCTaGCGTTCGCAGGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: AGSAEIQRDRGQGLAFVLMHTEI*RSQGLP
Trigger: TGGAAGTCCCTGCGAACGTCAGATCTCCGTGTGCAT...AAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTCTGCTGATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCCCGGGGGCTAGGTTGTaGAGGTCAGCTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAIPGARL*RSAGFL
Trigger: AAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGG...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp CCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCCGGGGGCTAGGTTGTaGAGGTCAGCTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PTGVAQKIRIIAVLPVTFPGARL*RSAGFL
Trigger: AAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGG...AAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATGGATTCCCGGTGTTTTaGAGCCAGTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: SSQTLMESLGQSNSASRDGFPVF*SQFGVL
Trigger: AAGTACCCCAAACTGGCTGCAAAACACCGGGAATCC...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACCCCCATCCAGGAACTTaGGCCGGGACCCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDPHPGT*AGTPCL
Trigger: AAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGG...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTATGGAAAGGACCCGTaGTATCCTGCCCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSYGKDP*YPALAE
Trigger: CTCAGCAAGGGCAGGATAGCACGGGTCCTTTCCATA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGAGACCCGCAGCTTCCTaGCTCTGCCTCTCTCTTAGT +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWRPAAS*LCLSLS
Trigger: ACTAAGAGAGAGGCAGAGGCAGGAAGCTGCGGGTCT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCAACAAGTGCCGGGCTaGCCGGAGGTGTCACAGGAT +
Preference number: 4 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSQQVPG*PEVSQD
Trigger: ATCCTGTGACACCTCCGGGCAGCCCGGCACTTGTTG...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGCGTGGGAGCAACAAGTaGCGGGCTGCCCGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLRGSNK*RAARRC
Trigger: ACACCTCCGGGCAGCCCGGCACTTGTTGCTCCCACG...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR GCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTCCTGGGCCAGCACTCTaGGCTCCTGCCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAPGPAL*APAAAQ
Trigger: CTGGGCAGCGGCAGGAGCGCAGAGTGCTGGCCCAGG...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp TCTAAATGTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGACCTGGGCCAGCACTCTaGGCTCCTGCCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SKCPFQLSDSQGLLYRRGPGPAL*APAAAQ
Trigger: CTGGGCAGCGGCAGGAGCGCAGAGTGCTGGCCCAGG...TCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGACATTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATCGCCGAGTCTGTCATaGCGTTGGCGCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLSPSLS*RWRPGL
Trigger: TAGCCCCGGGCGCCAACGGCATGACAGACTCGGCGA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR CCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACACACTCCCATTCTCCTaGAGTTCTGCTGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHTLPFS*SSAAQS
Trigger: ACTCTGCGCAGCAGAACTCCAGGAGAATGGGAGTGT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATGGAGTCTTAGGGGAGTaGTTGAGTCCTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYGVLGE*LSPSAA
Trigger: CGCTGCAGAAGGACTCAACCACTCCCCTAAGACTCC...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAAGTGACTTTCCAGTCTaGCCCTTAGTGCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVSDFPV*PLVPNN
Trigger: GTTATTGGGCACTAAGGGCCAGACTGGAAAGTCACT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAGCAGCGCAGCATTCCTaGCACTGCAACAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSAAQHS*HCNKLR
Trigger: TCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGC...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCAGGGCCTGGACGGCATaGAAGCCAGGGACAGCATGG +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTRAWTA*KPGTAW
Trigger: CCATGCTGTCCCTGGCTTCCATGCCGTCCAGGCCCT...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGGCCAATTTCCTTTTCTaGCAGGGCCTGGACGGCATG +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWANFLF*QGLDGM
Trigger: CATGCCGTCCAGGCCCTGCCAGAAAAGGAAATTGGC...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAAAGCAAGCAAACCCCATaGCTGGTAGACCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: HLGASPFTSEHYRRGIVESKQTP*LVDPVG
Trigger: ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCT...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATGCCTCACCGGAGGCTTaGTTCTGTTTTCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYASPEA*FCFLCG
Trigger: GCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGC...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATGGTATTGTCTGTCTGTaGAGTGGCCATGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYGIVCL*SGHGAQ
Trigger: CTGTGCCCCATGGCCACTCCACAGACAGACAATACC...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAGGCCTTGCTGATTTCTaGGACTCTCATATGGTCAAG +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVGLADF*DSHMVK
Trigger: CTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCC...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACACAGTGAATGACAACAGGTCGTaGGAGCAACAAGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QDRNSGLLIFALYHSDTVNDNRS*EQQVPG
Trigger: GCCCGGCACTTGTTGCTCCCACGACCTGTTGTCATT...CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTAGTCTGTCATGCCGTTaGCGCCCGGGGCTACCGTCC +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTSLSCR*RPGLPS
Trigger: GGACGGTAGCCCCGGGCGCCAACGGCATGACAGACT...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CCA 90 bp CAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACACAGTGACTGGAGGCCTGACTTaGCTTCCCCTTCGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QDRNSGLLIFALYHSDTVTGGLT*LPLRSL
Trigger: CAAAGAGCGAAGGGGAAGCCAAGTCAGGCCTCCAGT...CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp ACTGAAGCTCAAGGAGGCCACACAGCCAACAAGCAGCAGAGGGTGACCTTGGGTAGAAACAGCAGAAAGTaGTCCAGGTTGAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TEAQGGHTANKQQRVTLGRNSRK*SRLKWE
Trigger: CTCCCACTTCAACCTGGACCACTTTCTGCTGTTTCT...ACCCAAGGTCACCCTCTGCTGCTTGTTGGCTGTGTGGCCTCCTTGAGCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp ACTGAAGCTCAAGGAGGCCACACAGCCAACAAGCAGCAGAGGGTGACCTTGGGTGCAGGGAGGCATGCTTaGGCTCATTGTAAAGAACAA +
Preference number: 4 (lower is better)
Translates to: TEAQGGHTANKQQRVTLGAGRHA*AHCKEQ
Trigger: TTGTTCTTTACAATGAGCCCAAGCATGCCTCCCTGC...ACCCAAGGTCACCCTCTGCTGCTTGTTGGCTGTGTGGCCTCCTTGAGCTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR CAA 72 bp CAGACTTCTCTGGGGTGGAGTGGCCTCACCGGAGGCTaGGTTCTGTTTTCTCTGTGGCAATTGGCTATGATT +
Preference number: 4 (lower is better)
Translates to: QTSLGWSGLTGG*VLFSLWQLAMI
Trigger: AATCATAGCCAATTGCCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 72 bp CACCGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATaGAGGCGAGTCACAGAAGTACTTACCAAATACTCA +
Preference number: 4 (lower is better)
Translates to: HRAVEMAPGQWE*RRVTEVLTKYS
Trigger: TGAGTATTTGGTAAGTACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGTCTTCACGTCCCCGTTaGAGGTCAGGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMSSRPR*RSGRAG
Trigger: ACCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGA...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCGTGCTCAGGATCGGCTaGGGCGTTTGGCGACATCAG +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTVLRIG*GVWRHQ
Trigger: CTGATGTCGCCAAACGCCTCAGCCGATCCTGAGCAC...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTGCGCCTCAAGGCAGTaGTACAGAGGAGTCTATGAA +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSCASRQ*YRGVYE
Trigger: TTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAGGACTTTCCAGTTGCTaGATTCTGAACATCCAATCC +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVGLSSC*ILNIQS
Trigger: GGATTGGATGTTCAGAATTCAGCAACTGGAAAGTCC...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGTTGCTGACTAGACAGTaGATTCAACTCAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQLLTRQ*IQLSHS
Trigger: AGAATGACTGAGTTGAATTCACTGTCTAGTCAGCAA...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATTGCATTGTATCACTCTaGCACAGTGTGACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSQTLMESLGQSNSASRDCIVSL*HSVTEL
Trigger: CAGCTCAGTCACACTGTGTCAGAGTGATACAATGCA...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCCTTGACTTTGGGAGATaGGAACTAGGAGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAILDFGR*ELGGGQ
Trigger: CTGGCCCCCTCCTAGTTCTCATCTCCCAAAGTCAAG...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAAAGAGCTCTCTTACCTTaGCCACATGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: EGDLGSLLPDFRVQVLDQRALLP*PHGAWA
Trigger: TGCCCAAGCTCCATGTGGTCAAGGTAAGAGAGCTCT...TTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp GAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAAACAAGCAGCAGAGGGTaGCCTTGGGTCCTTATTACC +
Preference number: 4 (lower is better)
Translates to: EGDLGSLLPDFRVQVLDQTSSRG*PWVLIT
Trigger: GGTAATAAGGACCCAAGGTCACCCTCTGCTGCTTGT...TTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGATTCTCCTGGAGTTCTaGTGCGCAGAGTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWILLEF*CAELLV
Trigger: GACCAGCAACTCTGCGCAGCAGAACTCCAGGAGAAT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR GCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATAAGGACAGTTGCCGATaGTTTCTCCATCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SSQTLMESLGQSNSASRDKDSCR*FLHRFQ
Trigger: CTGGAATCGATGGAGAAAGCATCGGCAACTGTCCTT...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGGAAGGGCGGGTGCGTaGCGGGGGCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSGRAGA*RGLGCA
Trigger: TGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTGGAAGGGCGGGTGCGTaGCGGGGGCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAGRAGA*RGLGCA
Trigger: TGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCC...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp CAGGGAGGCATGCTTGGGCTCATTGTAAAGAACAATGATTTAATAATCAGAGCTGGAAGGGCGGGTGCGTaGCGGGGGCTAGGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QGGMLGLIVKNNDLIIRAGRAGA*RGLGCA
Trigger: TGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCC...AGCTCTGATTATTAAATCATTGTTCTTTACAATGAGCCCAAGCATGCCTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTGTCAGGAAGGGCGGGTaGGTGCCGGGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAVRKGG*VPGARL
Trigger: CAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGAC...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTGGATTCCCGGTGTTTTaGAGCCAGTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGGFPVF*SQFGVL
Trigger: AAGTACCCCAAACTGGCTGCAAAACACCGGGAATCC...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGGGAGGCGCCACCTCTaGAGCACCTGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSGRRHL*STWAST
Trigger: AGTGCTGGCCCAGGTGCTGCAGAGGTGGCGCCTCCC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR GCA 90 bp GATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTTCATTTGATAGAGGGAGGCGCCACCTCTaGAGCACCTGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: DSKKVTSLLATSTSSFDRGRRHL*STWAST
Trigger: AGTGCTGGCCCAGGTGCTGCAGAGGTGGCGCCTCCC...TCTATCAAATGAAGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCGGAAAGGCCTGCAGATaGCTCTCCCAACGAAGACCT +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAIGKACR*LSQRRP
Trigger: AGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTCC...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGCGATGCCCGCTGTGTTaGATTCCCGGTGTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKRCPLC*IPGVLQ
Trigger: CTGCAAAACACCGGGAATCCAACACAGCGGGCATCG...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCGATGCCCGCTGTGTTaGATTCCCGGTGTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: PTGVAQKIRIIAVLPVTFRCPLC*IPGVLQ
Trigger: CTGCAAAACACCGGGAATCCAACACAGCGGGCATCG...AAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CCA 90 bp CAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTCTTCCCCACAAGTGTTaGCGTCAATCTCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: QGTDGRCPENQNNSSVAGLPHKC*RQSPLV
Trigger: TACCAGAGGAGATTGACGCCAACACTTGTGGGGAAG...ACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGGATGGCGTTTGTCCTTaGCCTTGTAGGTATGGACGG +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWDGVCP*PCRYGR
Trigger: CCGTCCATACCTACAAGGCCAAGGACAAACGCCATC...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCTTTTCTGGCAGGGCCTaGACGGCATGGAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTFSGRA*TAWKPG
Trigger: CCCTGGCTTCCATGCCGTCCAGGCCCTGCCAGAAAA...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGGTTCTGTTTTCTCTGTaGCAATTGGCTATGATTCAC +
Preference number: 4 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQVLFSL*QLAMIH
Trigger: GTGAATCATAGCCAATTGCCACAGAGAAAACAGAAC...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTACAGACTTCTCTGGGGTaGAGTGGCCTCACCGGAGGC +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLQTSLG*SGLTGG
Trigger: GCCTCCGGTGAGGCCACTCCACCCCAGAGAAGTCTG...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAGGGAAAACTCGCACTTaGTGTGGCCTTTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVGKTRT*CGLFLI
Trigger: TATCAGAAAAAGGCCACACCAAGTGCGAGTTTTCCC...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATAGTCTGTCATGCCGTTaGCGCCCGGGGCTACCGTCC +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNSLSCR*RPGLPS
Trigger: GGACGGTAGCCCCGGGCGCCAACGGCATGACAGACT...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTCAGCCAGAGGATCATaGAGAGGCGCTGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKSARGS*RGAERK
Trigger: CTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCTCAGCCAGAGGATCATaGAGAGGCGCTGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAISARGS*RGAERK
Trigger: CTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGA...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp TTGAACTGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCATCAGCCAGAGGATCATaGAGAGGCGCTGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LNCSREPTGVAQKIRIIASARGS*RGAERK
Trigger: CTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGA...TGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCAGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR TCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTTCTTCACGTCCCCGTTaGAGGTCAGGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTSSRPR*RSGRAG
Trigger: ACCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGA...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR TCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTAGGTTAGCAGTTACATaGTGCCACCAGTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGRLAVT*CHQSKT
Trigger: AGTCTTGGACTGGTGGCATCATGTAACTGCTAACCT...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAAGGTTAGCAGTTACATaGTGCCACCAGTCCAAGACT +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSRLAVT*CHQSKT
Trigger: AGTCTTGGACTGGTGGCATCATGTAACTGCTAACCT...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTTCGGGGAAGGATTTCTaGGTACAGCAGGATTTCACA +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGSGKDF*VQQDFT
Trigger: TGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGA...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTTCATTCAGGACCAATaGAAAGGAAGCCTCCTACCC +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSFIQDQ*KGSLLP
Trigger: GGGTAGGAGGCTTCCTTTTCATTGGTCCTGAATGAA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTTGTGGCCAAATAAGCTaGTGGACTCTGTTTCCGACA +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGCGQIS*WTLFPT
Trigger: TGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACA...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCATGTGGCCAAATAAGCTaGTGGACTCTGTTTCCGACA +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSCGQIS*WTLFPT
Trigger: TGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACA...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGACAAGAAGGGAATGCTaGGGACAGGGCCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKTRREC*GQGHFP
Trigger: TGGGAAATGGCCCTGTCCTCAGCATTCCCTTCTTGT...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCATGGGGCACAGAACTGTaGAGAGCTTCTGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSWGTEL*RASVVS
Trigger: TGAAACAACAGAAGCTCTTCACAGTTCTGTGCCCCA...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACTTGTCCAGGCCTTGCTaGTTTCTGGGACTCTCATAT +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHLSRPC*FLGLSY
Trigger: ATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAA...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGATTCACCGTGCAGTTaGGATGGCCCCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLDSPCS*DGPWPV
Trigger: CACTGGCCAGGGGCCATCTCAACTGCACGGTGAATC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTATGACACCAGCATCTTaGTTCACCGTGCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSMTPAS*FTVQLR
Trigger: TCTCAACTGCACGGTGAATCAAGATGCTGGTGTCAT...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACACAGTGCCCCTTCGCTCTTTGTaGACTTTAGAGGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QDRNSGLLIFALYHSDTVPLRSL*TLEVCQ
Trigger: CTGGCAAACCTCTAAAGTTCACAAAGAGCGAAGGGG...CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTAAGGACAGTTGCCGATaGTTTCTCCATCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGKDSCR*FLHRFQ
Trigger: CTGGAATCGATGGAGAAAGCATCGGCAACTGTCCTT...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTGAGAGAAAGGACAGTTaGCGATGCTTTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGERKDS*RCFLHR
Trigger: TCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTC...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGAGAGAAAGGACAGTTaGCGATGCTTTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHERKDS*RCFLHR
Trigger: TCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATTGGAAAAGATGTCGATaGCCGCTGTGTTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYWKRCR*PLCWIP
Trigger: GGGAATCCAACACAGCGGGCATCGACATCTTTTCCA...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTCCCCATCCAGGAACTTaGGCCGGGACCCCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTPHPGT*AGTPCL
Trigger: AAGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGG...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATGATCTCACTGTCAGCTaGACAGGTGTTGGTGAACTC +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYDLTVS*TGVGEL
Trigger: GAGTTCACCAACACCTGTGCAGCTGACAGTGAGATC...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAGGGGCAAAATGGCTGTaGTCAGGATCGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLGAKWL*SGSAEA
Trigger: CGCCTCAGCCGATCCTGAGCACAGCCATTTTGCCCC...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCATCCCATCCCAGTCACTaGAGTTTAGAATTGCATGCC +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSSHPSH*SLELHA
Trigger: GGCATGCAATTCTAAACTGCAGTGACTGGGATGGGA...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATAGGTCATCCTGCCTGTaGTGTAAATTCGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYRSSCL*CKFGEG
Trigger: TCCTTCCCCGAATTTACAGCACAGGCAGGATGACCT...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTTCTGAGTTTGACTCTTaGTTCTGCCTTCGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGSEFDS*FCLRLP
Trigger: TGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGA...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTTCGCCGAGTCTGTCATaGCGTTGGCGCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILASPSLS*RWRPGL
Trigger: TAGCCCCGGGCGCCAACGGCATGACAGACTCGGCGA...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp GCCAACAAGCAGCAGAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCTTTCCTCACAGAGTTTaGTGTCTGGCTGAGACAGTA +
Preference number: 4 (lower is better)
Translates to: ANKQQRVTLGPYYLTSGSFPHRV*CLAETV
Trigger: TACTGTCTCAGCCAGACAGCAAACTCTGTGAGGAAA...GGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTCTGCTGCTTGTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGTTGTGCAGGTCAGCTaGCTTTCTTTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHVVQVS*LSFQIH
Trigger: GTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAAC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGTGGCCGGCCGAAAGGTaGACTGTGTCTATCATTTCT +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWWPAER*TVSIIS
Trigger: AGAAATGATAGACACAGTCCACCTTTCGGCCGGCCA...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAAGTGACTTTCCAGTCTaGCCCTTAGTGCCCAATAAC +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSSDFPV*PLVPNN
Trigger: GTTATTGGGCACTAAGGGCCAGACTGGAAAGTCACT...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATAAGCCAGGGACAGCATaGGCCAGGTGCGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNKPGTA*ARCAAA
Trigger: TGCTGCTGCGCACCTGGCCCATGCTGTCCCTGGCTT...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGAGCAAGCAAACCCCATaGCTGGTAGACCCCGTGGGT +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMSKQTP*LVDPVG
Trigger: ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCT...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAAAGGGCCTGTGGCAAATaGATTTTCTCACCGGGCGTT +
Preference number: 4 (lower is better)
Translates to: HLGASPFTSEHYRRGIVERACGK*IFSPGV
Trigger: AACGCCCGGTGAGAAAATCCATTTGCCACAGGCCCT...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGGGTATTGTCTGTCTGTaGAGTGGCCATGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSGIVCL*SGHGAQ
Trigger: CTGTGCCCCATGGCCACTCCACAGACAGACAATACC...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAGGCCTTGCTGATTTCTaGGACTCTCATATGGTCAAG +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSGLADF*DSHMVK
Trigger: CTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCC...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGATGGCCCCTGGCCAGTaGGAATTGAGGCGAGTCACA +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMMAPGQ*ELRRVT
Trigger: TGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCAT...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 72 bp ACCAGAGTGTCAGAAGTAGTGAGACTGAAGCTGTGTTaGCCAGACACCCAAGTCCATAGCCAGCTCGGTACT +
Preference number: 4 (lower is better)
Translates to: TRVSEVVRLKLC*PDTQVHSQLGT
Trigger: AGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAACACAGCTTCAGTCTCACTACTTCTGACACTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AGTAAGTGCAATGATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTTCTTCACGTCCCCGTTaGAGGTCAGGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: SKCNDSKKVTSLLATSTSSSRPR*RSGRAG
Trigger: ACCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGA...AGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATCATTGCACTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGGGCACTGCAACAAACTaGGAATGTGTCTCAAGTGAC +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWGTATN*ECVSSD
Trigger: GTCACTTGAGACACATTCTCAGTTTGTTGCAGTGCC...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATCCCTCCCGTGCTCCCTaGGTTGTTCTTGGGACACCT +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNPSRAP*VVLGTP
Trigger: AGGTGTCCCAAGAACAACTCAGGGAGCACGGGAGGG...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTAGAAGCAGGCATTGCTaGCTAGACAGTGAATTCAAC +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSRSRHC*LDSEFN
Trigger: GTTGAATTCACTGTCTAGTCAGCAATGCCTGCTTCT...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATCTGGGAGATGCATACTaGCAAAGGGGAAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYLGDAY*QRGRMC
Trigger: ACACATTCTTCCCCTTTGTCAGTATGCATCTCCCAG...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AGATCTGACGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTTTCATGCCGGGTTAAGGGAATaGCAACAGGTCGTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RSDVRRDFHAHVLNLLFHAGLRE*QQVVGA
Trigger: TGCTCCCACGACCTGTTGTCATTCCCTTAACCCGGC...ATGAAAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GCTGGATCAGCAGAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTAAGGCAGGTGGGAATTaGGGAAATCACAGGATGAAG +
Preference number: 4 (lower is better)
Translates to: AGSAEIQRDRGQGLAFVLKAGGN*GNHRMK
Trigger: CTTCATCCTGTGATTTCCTCAATTCCCACCTGCCTT...AAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTCTGCTGATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp ACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAACAGGTGGGAAAGTGGTCCAGGTTaGAGTGGGAGATTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TLGPYYLTSGSRFLTNRWESGPG*SGRLFW
Trigger: CCAAAACAATCTCCCACTTCAACCTGGACCACTTTC...CCACCTGTTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATAAGGACAGTTGCCGATaGTTTCTCCATCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYKDSCR*FLHRFQ
Trigger: CTGGAATCGATGGAGAAAGCATCGGCAACTGTCCTT...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACACAGTGGAGAGAAAGGACAGTTaGCGATGCTTTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: QDRNSGLLIFALYHSDTVERKDS*RCFLHR
Trigger: TCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTC...CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGCCGGGGGCTAGGTTGTaGAGGTCAGCTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLPGARL*RSAGFL
Trigger: AAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGG...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAAGGATTCCCGGTGTTTTaGAGCCAGTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: HLGASPFTSEHYRRGIVEGFPVF*SQFGVL
Trigger: AAGTACCCCAAACTGGCTGCAAAACACCGGGAATCC...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTGGATTCCCGGTGTTTTaGAGCCAGTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: PTGVAQKIRIIAVLPVTFGFPVF*SQFGVL
Trigger: AAGTACCCCAAACTGGCTGCAAAACACCGGGAATCC...AAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCATTAAGTACCCAGAAGTaGCTTCCTTCTGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSLSTQK*LPSVLL
Trigger: GAGGAGTACAGAAGGAAGGCACTTCTGGGTACTTAA...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTTCGCCGAGTCTGTCATaGCGTTGGCGCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: KYILLLMLVFPFLFVSRASPSLS*RWRPGL
Trigger: TAGCCCCGGGCGCCAACGGCATGACAGACTCGGCGA...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTTCTTCTGGCTGGTCTaGAACCTCATACGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKFFWLV*NLIRPL
Trigger: GAGAGGACGTATGAGGTTCCAGACCAGCCAGAAGAA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCCCTCTGTCTTCTGACTaGACAGAGGCCAAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTPLSSD*TEAKLV
Trigger: GACCAGCTTGGCCTCTGTCCAGTCAGAAGACAGAGG...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTCAGAGTTGCTGGTCCTaGGTTGATGAATATAACCCT +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSQSCWS*VDEYNP
Trigger: AGGGTTATATTCATCAACCCAGGACCAGCAACTCTG...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGCGATGCCCGCTGTGTTaGATTCCCGGTGTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMRCPLC*IPGVLQ
Trigger: CTGCAAAACACCGGGAATCCAACACAGCGGGCATCG...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGGGAGTCTTAGGGGAGTaGTTGAGTCCTTCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMGVLGE*LSPSAA
Trigger: CGCTGCAGAAGGACTCAACCACTCCCCTAAGACTCC...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGCAGCTTGGAGAAACTaGGAAGACATTTTTGACCCA +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHAAWRN*EDIFDP
Trigger: TGGGTCAAAAATGTCTTCCCAGTTTCTCCAAGCTGC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATTTCTCTGGGGTGGAGTaGCCTCACCGGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNFSGVE*PHRRLG
Trigger: ACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAA...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTGGGAAAACTCGCACTTaGTGTGGCCTTTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGGKTRT*CGLFLI
Trigger: TATCAGAAAAAGGCCACACCAAGTGCGAGTTTTCCC...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATAATGACAACAGGTCGTaGGAGCAACAAGTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDNDNRS*EQQVPG
Trigger: GCCCGGCACTTGTTGCTCCCACGACCTGTTGTCATT...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR CCA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATTATCATCCCTTTCAGTaGTACTTGTTCCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: SSQTLMESLGQSNSASRDYHPFQ*YLFLDH
Trigger: GTGGTCAAGGAACAAGTACCACTGAAAGGGATGATA...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCATAGGGGCCAAGGGCTaGCCTTTGTTCTTTCATTGG +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAIIGAKG*PLFFHW
Trigger: CCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTAT...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp AGATCTGACGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTTTCATGTGCACCCTGGGCCTTaGCTGCTGAGCTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: RSDVRRDFHAHVLNLLFHVHPGP*LLSWSF
Trigger: AAATGACCAGCTCAGCAGCCAAGGCCCAGGGTGCAC...ATGAAAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CAA 72 bp AGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATaGGCCATCTTCTTTTTGATCTCCAGCTTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RDRGQGLAFVLS*AIFFLISSFSG
Trigger: CCCAGAGAAGCTGGAGATCAAAAAGAAGATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CAA 72 bp AAGTTTTGGCATCCGAAGCCAAACTGGAGGCCTGACTaGGCTTCCCCTTCGCTCTTTGTGAACTTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: KFWHPKPNWRPD*ASPSLFVNFRG
Trigger: ACCTCTAAAGTTCACAAAGAGCGAAGGGGAAGCCAAGTCAGGCCTCCAGTTTGGCTTCGGATGCCAAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAATACTGTGCTGAATGGTaGAGCTTGAAGGAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HLGASPFTSEHYRRGIVEYCAEW*SLKEKA
Trigger: TGCCTTCTCCTTCAAGCTTCACCATTCAGCACAGTA...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR TCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGTCAGCCAGAGGATCATaGAGAGGCGCTGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMSARGS*RGAERK
Trigger: CTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGA...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGATACAGAGGAGTCTATaGAGCTGGAGTCTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKIQRSL*SWSLRG
Trigger: TCCCCTAAGACTCCAGCTTCATAGACTCCTCTGTAT...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTTGTGGCAATTGGCTATaGTTCACAGATGTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGCGNWL*FTDVFP
Trigger: TGGAAACACATCTGTGAATCATAGCCAATTGCCACA...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACTCAAATGGCTATCATTaGTCATATAACACCCCCACC +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHSNGYH*SYNTPT
Trigger: GGTGGGGGTGTTATATGATCAATGATAGCCATTTGA...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATGAAGGCCAGACAGGCTaGAGCATCTGGAGAAAGATC +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDEGQTG*SIWRKI
Trigger: GATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTC...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAACTGTTGCTGAGACATaGTGTGCTGCACATATGATA +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSTVAET*CAAHMI
Trigger: TATCATATGTGCAGCACATCATGTCTCAGCAACAGT...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCACAAGAAGGGAATGCTaGGGACAGGGCCATTTCCCA +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTTRREC*GQGHFP
Trigger: TGGGAAATGGCCCTGTCCTCAGCATTCCCTTCTTGT...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCGGAACTCGGGTCTCCTaGTCTTTGCATTGTATCACT +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAIGTRVS*SLHCIT
Trigger: AGTGATACAATGCAAAGATCAGGAGACCCGAGTTCC...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTCAGGGTCCAGGTTCTTaGCCAACAGGTGGTACTGTC +
Preference number: 4 (lower is better)
Translates to: VLSNSQIPRVCYIGEDDTQGPGS*PTGGTV
Trigger: GACAGTACCACCTGTTGGTCAAGAACCTGGACCCTG...AGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp AGGAAAATAATGTGGGCTCACCTTAGGAAGTTGCTGGAGGAAGTGAGAAGGTGGTGGGTCCTTATTACCTaGCTTCAGGGTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RKIMWAHLRKLLEEVRRWWVLIT*LQGPGS
Trigger: AGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCA...CCACCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGCCCACATTATTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp GAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAAACTACTGTCTTCAAATaGGGTGAAGGCAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: EGDLGSLLPDFRVQVLDQTTVFK*GEGKQS
Trigger: GCTTTGCTTGCCTTCACCTCATTTGAAGACAGTAGT...TTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp TTGAACTGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAAAGGACAGTTGCCGATaGTTTCTCCATCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LNCSREPTGVAQKIRIIAKDSCR*FLHRFQ
Trigger: CTGGAATCGATGGAGAAAGCATCGGCAACTGTCCTT...TGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCAGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp CCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTGAGAGAAAGGACAGTTaGCGATGCTTTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: PTGVAQKIRIIAVLPVTFERKDS*RCFLHR
Trigger: TCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTC...AAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp ATAATGTGGGCTCACCTTAGGAAGTTGCTGGAGGAAGTGAGAAGGTGGGTCTGTGAGAGAAAGGACAGTTaGCGATGCTTTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: IMWAHLRKLLEEVRRWVCERKDS*RCFLHR
Trigger: TCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTC...ACAGACCCACCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGCCCACATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGTGGAAAAGATGTCGATaGCCGCTGTGTTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSWKRCR*PLCWIP
Trigger: GGGAATCCAACACAGCGGGCATCGACATCTTTTCCA...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AGGAAAATAATGTGGGCTCACCTTAGGAAGTTGCTGGAGGAAGTGAGAAGGTGGTGGAAAAGATGTCGATaGCCGCTGTGTTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: RKIMWAHLRKLLEEVRRWWKRCR*PLCWIP
Trigger: GGGAATCCAACACAGCGGGCATCGACATCTTTTCCA...CCACCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGCCCACATTATTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGGGGCAAAATGGCTGTaGTCAGGATCGGCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSGAKWL*SGSAEA
Trigger: CGCCTCAGCCGATCCTGAGCACAGCCATTTTGCCCC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGACAATGGGGCTGTGTaGAGCAGGTCCTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLDNGAV*SRSCSL
Trigger: AAGCGAACAGGACCTGCTGCACACAGCCCCATTGTC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTCGATGCCCGCTGTGTTaGATTCCCGGTGTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTRCPLC*IPGVLQ
Trigger: CTGCAAAACACCGGGAATCCAACACAGCGGGCATCG...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CCA 90 bp AACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCCGATGCCCGCTGTGTTaGATTCCCGGTGTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: NSQIPRVCYIGEDDTTCCRCPLC*IPGVLQ
Trigger: CTGCAAAACACCGGGAATCCAACACAGCGGGCATCG...GCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp TGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGTGTAGGCAGAAAACTTaGAAAAGATGTCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: CSREPTGVAQKIRIIAVLCRQKT*KRCRCP
Trigger: CGGGCATCGACATCTTTTCCAAGTTTTCTGCCTACA...CAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CCA 90 bp GGGCCAGACAATGAATGTTCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCATTTCTTTAGAGCCTTaGTTAGGCCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: GPDNECSSQTLMESLGQSISLEP*LGLFQE
Trigger: CTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAAT...GCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGAACATTCATTGTCTGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACCTTCCCCACAAGTGTTaGCGTCAATCTCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDLPHKC*RQSPLV
Trigger: TACCAGAGGAGATTGACGCCAACACTTGTGGGGAAG...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTTTTCTGGCAGGGCCTaGACGGCATGGAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSFSGRA*TAWKPG
Trigger: CCCTGGCTTCCATGCCGTCCAGGCCCTGCCAGAAAA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATTCACCGGGCGTTCACTaGGAGAAGGAGTTGATGAGT +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDSPGVH*EKELMS
Trigger: ACTCATCAACTCCTTCTCCCAGTGAACGCCCGGTGA...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTTCTCTGGGGTGGAGTaGCCTCACCGGAGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSFSGVE*PHRRLG
Trigger: ACCAAGCCTCCGGTGAGGCCACTCCACCCCAGAGAA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTCTGGGACTCTCATATaGTCAAGATCTATTTCAGGC +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSSGTLI*SRSISG
Trigger: GCCTGAAATAGATCTTGACCATATGAGAGTCCCAGA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp AGATCTGACGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTTTCATCTCTCATGGAGAGCCTaGGCCAGAGCAACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RSDVRRDFHAHVLNLLFHLSWRA*ARATLL
Trigger: AAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAG...ATGAAAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp CCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTGAAAGCTTGACCACATaGAGCTTGGGCAACAGATTG +
Preference number: 4 (lower is better)
Translates to: PTGVAQKIRIIAVLPVTFESLTT*SLGNRL
Trigger: CAATCTGTTGCCCAAGCTCCATGTGGTCAAGCTTTC...AAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
3UTR CAA 72 bp CCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATaGTTGAAGGTAAGGGCCTGTGGCAAATGGATTTTC +
Preference number: 4 (lower is better)
Translates to: PHPLPANTIEGG*LKVRACGKWIF
Trigger: GAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 72 bp GGGGCACAGAACTGTGAAGAGCTTCTGTTGTTTCATTaGATAAGGGCCTGGAAAGTCAGCCTGGGAAAACTC +
Preference number: 4 (lower is better)
Translates to: GAQNCEELLLFH*IRAWKVSLGKL
Trigger: GAGTTTTCCCAGGCTGACTTTCCAGGCCCTTATCAAATGAAACAACAGAAGCTCTTCACAGTTCTGTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGTCATTCATGCTTATTaGTCCGAGAGATCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHVIHAY*SERSVY
Trigger: GTAAACAGATCTCTCGGATCAATAAGCATGAATGAC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR TCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAATCATGAAGAGGCGCTaGGAGAAAGGACAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLIMKRR*EKGQLP
Trigger: CGGCAACTGTCCTTTCTCTCAGCGCCTCTTCATGAT...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGACATGAATCTTCACGTCCCCGTTaGAGGTCAGGAAGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: ENQNNSSVAGDISRARHESSRPR*RSGRAG
Trigger: ACCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGA...TTCATGTCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR TCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATCTTGGCCACAATCTTaGCCACATGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLSWPQS*PHGAWA
Trigger: TGCCCAAGCTCCATGTGGTCAAGATTGTGGCCAAGA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGAGGCTGGAGTTCCCATaGTACCAGCAAGATGAGGCT +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLRLEFP*YQQDEA
Trigger: AGCCTCATCTTGCTGGTATCATGGGAACTCCAGCCT...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAAGGACTTTCCAGTTGCTaGATTCTGAACATCCAATCC +
Preference number: 4 (lower is better)
Translates to: HLGASPFTSEHYRRGIVEGLSSC*ILNIQS
Trigger: GGATTGGATGTTCAGAATTCAGCAACTGGAAAGTCC...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATTCACCACACTGTTGCTaGGACATGATGTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDSPHCC*DMMCCT
Trigger: TGTGCAGCACATCATGTCTCAGCAACAGTGTGGTGA...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACATTGGTTCAGATTCATaGGGAAAACACTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHIGSDS*GKHSAV
Trigger: TACAGCTGAGTGTTTTCCTCATGAATCTGAACCAAT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGATCCCAGATGCTCACATaGAAAGGAGCGAAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERSQMLT*KGAKPG
Trigger: TCCCGGCTTCGCTCCTTTTCATGTGAGCATCTGGGA...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR TCA 90 bp CCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTAACAAAAAGAAAGCTTaGCCACATGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PTGVAQKIRIIAVLPVTFNKKKA*PHGAWA
Trigger: TGCCCAAGCTCCATGTGGTCAAGCTTTCTTTTTGTT...AAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTAGTCTTCGTCATTCATaGTTATTGATCCGAGAGATC +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSSLRHS*LLIREI
Trigger: GATCTCTCGGATCAATAAGCATGAATGACGAAGACT...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTCCGGGGGCTAGGTTGTaGAGGTCAGCTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSPGARL*RSAGFL
Trigger: AAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGG...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTCCGGGGGCTAGGTTGTaGAGGTCAGCTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAPGARL*RSAGFL
Trigger: AAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGG...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTAGAGCAGCATTGTTCTaGTGCTTGGTATTTTTGATG +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSRAALF*CLVFLM
Trigger: CATCAAAAATACCAAGCAGCAGAACAATGCTGCTCT...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAGTGGTTGAGTCCTTCTaGAGCGGGGATGGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERVVESF*SGDGAK
Trigger: TTTTGCCCCATCCCCGCTGCAGAAGGACTCAACCAC...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATATGGAAAGGACCCGTaGTATCCTGCCCTTGCTGAG +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLYGKDP*YPALAE
Trigger: CTCAGCAAGGGCAGGATAGCACGGGTCCTTTCCATA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTTCTGTGCCACCAAAATaGTTTCTGAGCGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGSVPPK*FLSDLY
Trigger: ATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGA...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCACCCCCAATAGTGCTGTaGAAGTCAAAGAAGATAAAT +
Preference number: 4 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSPPIVL*KSKKIN
Trigger: ATTTATCTTCTTTGACTTGCACAGCACTATTGGGGG...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACGTTGTGCAGGTCAGCTaGCTTTCTTTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDVVQVS*LSFQIH
Trigger: GTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAAC...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTGTAGGCAGAAAACTTaGAAAAGATGTCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKCRQKT*KRCRCP
Trigger: CGGGCATCGACATCTTTTCCAAGTTTTCTGCCTACA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGCTTCCCCACAAGTGTTaGCGTCAATCTCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMLPHKC*RQSPLV
Trigger: TACCAGAGGAGATTGACGCCAACACTTGTGGGGAAG...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACTTGTTGATATTTCTATaGAAAGGACCCGTGCTATCC +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHLLIFL*KGPVLS
Trigger: GGATAGCACGGGTCCTTTCCATAGAAATATCAACAA...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGTCTGGGACTCTCATATaGTCAAGATCTATTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWSGTLI*SRSISG
Trigger: GCCTGAAATAGATCTTGACCATATGAGAGTCCCAGA...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATATGGATAGAAGACAATaGGGCTGTGTGCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDMDRRQ*GCVQQV
Trigger: GACCTGCTGCACACAGCCCCATTGTCTTCTATCCAT...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTGTATACAACAACGATAATTGCGACTATTACACATATTAAGCCCCCACAATATAGTCTGTCATGCCGTTaGCGCCCGGGGCTACCGTCC +
Preference number: 4 (lower is better)
Translates to: LYTTTIIATITHIKPPQYSLSCR*RPGLPS
Trigger: GGACGGTAGCCCCGGGCGCCAACGGCATGACAGACT...ATATTGTGGGGGCTTAATATGTGTAATAGTCGCAATTATCGTTGTTGTATACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACTGTTCCTTGACCACATaGAGCTTGGGCAACAGATTG +
Preference number: 4 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDCSLTT*SLGNRL
Trigger: CAATCTGTTGCCCAAGCTCCATGTGGTCAAGGAACA...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp AGGAAAATAATGTGGGCTCACCTTAGGAAGTTGCTGGAGGAAGTGAGAAGGTGGCTTACCTTGACCACATaGAGCTTGGGCAACAGATTG +
Preference number: 4 (lower is better)
Translates to: RKIMWAHLRKLLEEVRRWLTLTT*SLGNRL
Trigger: CAATCTGTTGCCCAAGCTCCATGTGGTCAAGGTAAG...CCACCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGCCCACATTATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp TCTAAATGTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGAGACCTGGGCCTAAGATaGAGCTGGATCTTGCAGGCC +
Preference number: 4 (lower is better)
Translates to: SKCPFQLSDSQGLLYRRGDLGLR*SWILQA
Trigger: GGCCTGCAAGATCCAGCTCCATCTTAGGCCCAGGTC...TCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGACATTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACTCATGGGTATTCAGCTaGGTGGCATATAAATCATTT +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHSWVFS*VAYKSF
Trigger: AAATGATTTATATGCCACTCAGCTGAATACCCATGA...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR TCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATTCTTGGCCACAATCTTaGCCACATGGAGCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNSWPQS*PHGAWA
Trigger: TGCCCAAGCTCCATGTGGTCAAGATTGTGGCCAAGA...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTCTGAGAAGGTATTTTaGTATTGGCAGAAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSSEKVF*YWQKKL
Trigger: TAGCTTCTTCTGCCAATATCAAAATACCTTCTCAGA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCAGAATGTGTCTCAAGTaGCTTTCCAGTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTRMCLK*LSSLAL
Trigger: AAGGGCCAGACTGGAAAGTCACTTGAGACACATTCT...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGTGGAAAGGTTCCTTTTaGGGTGGAAATGAATCAACT +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWWKGSF*GGNEST
Trigger: AGTTGATTCATTTCCACCTCAAAAGGAACCTTTCCA...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAGAAGGCCAGACAGGCTaGAGCATCTGGAGAAAGATC +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHEREGQTG*SIWRKI
Trigger: GATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTC...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGTTCATTCAGGACCAATaGAAAGGAAGCCTCCTACCC +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMFIQDQ*KGSLLP
Trigger: GGGTAGGAGGCTTCCTTTTCATTGGTCCTGAATGAA...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGCTTTGGATCCATCATaGTTTTACTTATCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHALDPS*FYLSSL
Trigger: TAAGCTGGATAAGTAAAATCATGATGGATCCAAAGC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATATTGGTTCAGATTCATaGGGAAAACACTCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYIGSDS*GKHSAV
Trigger: TACAGCTGAGTGTTTTCCTCATGAATCTGAACCAAT...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACCTGACACAGTGTGACTaGGCTGGAATTATATCATCC +
Preference number: 4 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDLTQCD*AGIISS
Trigger: GGATGATATAATTCCAGCTCAGTCACACTGTGTCAG...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp ACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAACAGGTGGTCTTCCACCAACACTTaGAGTAAGCAATATATGCCT +
Preference number: 4 (lower is better)
Translates to: TLGPYYLTSGSRFLTNRWSSTNT*SKQYMP
Trigger: AGGCATATATTGCTTACTTCAAGTGTTGGTGGAAGA...CCACCTGTTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATTTGTGTCATAGATGGTaGTGTAGTCTTCGTCATTCA +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYLCHRW*CSLRHS
Trigger: TGAATGACGAAGACTACAGCACCATCTATGACACAA...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR GCA 90 bp AACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCGGATTCCCGGTGTTTTaGAGCCAGTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: NSQIPRVCYIGEDDTTCCGFPVF*SQFGVL
Trigger: AAGTACCCCAAACTGGCTGCAAAACACCGGGAATCC...GCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp AGATCTGACGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTTTCATTGGAAAAGATGTCGATaGCCGCTGTGTTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: RSDVRRDFHAHVLNLLFHWKRCR*PLCWIP
Trigger: GGGAATCCAACACAGCGGGCATCGACATCTTTTCCA...ATGAAAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTTGGAAAAGATGTCGATaGCCGCTGTGTTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTWKRCR*PLCWIP
Trigger: GGGAATCCAACACAGCGGGCATCGACATCTTTTCCA...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp TGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGAGAGCAGCATTGTTCTaGTGCTTGGTATTTTTGATG +
Preference number: 4 (lower is better)
Translates to: CSREPTGVAQKIRIIAVLRAALF*CLVFLM
Trigger: CATCAAAAATACCAAGCAGCAGAACAATGCTGCTCT...CAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp GAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAAAGAGCAGCATTGTTCTaGTGCTTGGTATTTTTGATG +
Preference number: 4 (lower is better)
Translates to: EGDLGSLLPDFRVQVLDQRAALF*CLVFLM
Trigger: CATCAAAAATACCAAGCAGCAGAACAATGCTGCTCT...TTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGCCCCCAATAGTGCTGTaGAAGTCAAAGAAGATAAAT +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWPPIVL*KSKKIN
Trigger: ATTTATCTTCTTTGACTTGCACAGCACTATTGGGGG...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTGAGATGAAGAAACTGTaGTTTGGATCCATCATGATT +
Preference number: 4 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGEMKKL*FGSIMI
Trigger: AATCATGATGGATCCAAAGCACAGTTTCTTCATCTC...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATGATCAGTGTCCCAGATaGTCACATGAAAAGGAGCGA +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDDQCPR*SHEKER
Trigger: TCGCTCCTTTTCATGTGAGCATCTGGGACACTGATC...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR GCA 90 bp ACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAACAGGTGGGAGGATGACACTACATaGTGCAAATGGTTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: TLGPYYLTSGSRFLTNRWEDDTT*CKWLVS
Trigger: ACTTACTAACCATTTGCAGCATGTAGTGTCATCCTC...CCACCTGTTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTCTTCCCCACAAGTGTTaGCGTCAATCTCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTLPHKC*RQSPLV
Trigger: TACCAGAGGAGATTGACGCCAACACTTGTGGGGAAG...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGACAATCTTGACCACATaGAGCTTGGGCAACAGATTG +
Preference number: 4 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSTILTT*SLGNRL
Trigger: CAATCTGTTGCCCAAGCTCCATGTGGTCAAGATTGT...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGGCAGCTTGGAGAAACTaGGAAGACATTTTTGACCCA +
Preference number: 4 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSAAWRN*EDIFDP
Trigger: TGGGTCAAAAATGTCTTCCCAGTTTCTCCAAGCTGC...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAAGGGCCTGTGGCAAATaGATTTTCTCACCGGGCGTT +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERRACGK*IFSPGV
Trigger: AACGCCCGGTGAGAAAATCCATTTGCCACAGGCCCT...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATGAAGGTAAGGGCCTGTaGCAAATGGATTTTCTCACC +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDEGKGL*QMDFLT
Trigger: GGTGAGAAAATCCATTTGCCACAGGCCCTTACCTTC...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATGTTCCTCTTCCTCAATaGGCTCTAGGAGACCTCCTG +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNVPLPQ*ALGDLL
Trigger: CAGGAGGTCTCCTAGAGCCCATTGAGGAAGAGGAAC...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATTCAATACCTTCTCTCTaGGCCAAACTCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDSIPSL*AKLRSR
Trigger: CCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGA...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAAGATCAAGACTTCACTaGCCCCACCAGCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLRSRLH*PHQHKK
Trigger: CTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCT...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTTGGGTCTTGACCACATaGAGCTTGGGCAACAGATTG +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTWVLTT*SLGNRL
Trigger: CAATCTGTTGCCCAAGCTCCATGTGGTCAAGACCCA...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CCA 90 bp GAAAGGAAAAGAAGGCAAGAAGGAATACAATCCACTTCTGTTCTTCTAGGCATGCATCCGAAGCCAAACTaGAGGCCTGACTTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ERKRRQEGIQSTSVLLGMHPKPN*RPDLAS
Trigger: GGAAGCCAAGTCAGGCCTCCAGTTTGGCTTCGGATG...CATGCCTAGAAGAACAGAAGTGGATTGTATTCCTTCTTGCCTTCTTTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
3UTR CAA 72 bp CACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTaGAAGGTAAGGGCCTGTGGCAAATGGATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HPLPANTIEGGL*KVRACGKWIFS
Trigger: TGAGAAAATCCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 72 bp ACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTaGCCGGTGACATTTCAAGAGCTAGACATGAACTGC +
Preference number: 4 (lower is better)
Translates to: TGVAQKIRIIAV*PVTFQELDMNC
Trigger: GCAGTTCATGTCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR TCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTTCAGCCAGAGGATCATaGAGAGGCGCTGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILASARGS*RGAERK
Trigger: CTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGA...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR TCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAATACAGAGGAGTCTATaGAGCTGGAGTCTTAGGGGA +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLIQRSL*SWSLRG
Trigger: TCCCCTAAGACTCCAGCTTCATAGACTCCTCTGTAT...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTACCAGTTGCTGAATTCTaGACATCCAATCCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLPVAEF*TSNPSP
Trigger: AGGACTCGGATTGGATGTTCAGAATTCAGCAACTGG...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATTTCTTTATCAGGAGATaGAGAAACTGTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYFFIRR*RNCALD
Trigger: ATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAA...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATGGGGCACAGAACTGTaGAGAGCTTCTGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLWGTEL*RASVVS
Trigger: TGAAACAACAGAAGCTCTTCACAGTTCTGTGCCCCA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATTGTCCAGGCCTTGCTaGTTTCTGGGACTCTCATAT +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLLSRPC*FLGLSY
Trigger: ATATGAGAGTCCCAGAAATCAGCAAGGCCTGGACAA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTTCATTTGATAGAAGGTGGTACTGTCCTTaGCTCATCCACACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: DSKKVTSLLATSTSSFDRRWYCP*LIHTGD
Trigger: GTCACCTGTGTGGATGAGTCAAGGACAGTACCACCT...TCTATCAAATGAAGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp ATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTAGCCAGGGAAATCCTATaGGGAAGAGGCCTTTGGAGT +
Preference number: 4 (lower is better)
Translates to: IPRVCYIGEDDTTCCKWLAREIL*GRGLWS
Trigger: ACTCCAAAGGCCTCTTCCTCATAGGATTTCCCTGGC...TAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp GTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTATGGAAAAGATGTCGATaGCCGCTGTGTTGGATTCCC +
Preference number: 4 (lower is better)
Translates to: VAQKIRIIAVLPVTFQELWKRCR*PLCWIP
Trigger: GGGAATCCAACACAGCGGGCATCGACATCTTTTCCA...TAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR GCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCAGAGCAGCATTGTTCTaGTGCTTGGTATTTTTGATG +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAIRAALF*CLVFLM
Trigger: CATCAAAAATACCAAGCAGCAGAACAATGCTGCTCT...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGAAAAGGAGTTGGTGTTaGATGTTTCTAAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PANTIEGGLLKVRACGKWKRSWC*MFLKHL
Trigger: CAGATGCTTTAGAAACATGCAACACCAACTCCTTTT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATAGGTCATCCTGCCTGTaGTGTAAATTCGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNRSSCL*CKFGEG
Trigger: TCCTTCCCCGAATTTACAGCACAGGCAGGATGACCT...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAGAGTCCTTGGAATTCTaGAGACTTCTCTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERESLEF*RLLWGG
Trigger: TCCACCCCAGAGAAGTCTGCAGAATTCCAAGGACTC...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAATCTGTGCCACCAAAATaGTTTCTGAGCGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: HLGASPFTSEHYRRGIVESVPPK*FLSDLY
Trigger: ATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGA...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGATTTGACTCTTGCTTCTaGCTTCGTCTCCCACTACCC +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERFDSCF*LRLPLP
Trigger: GGGTAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAA...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATGCTGCGCAGAGTTGCTaGTCCTGGGTTGATGAATAT +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNAAQSC*SWVDEY
Trigger: ATATTCATCAACCCAGGACCAGCAACTCTGCGCAGC...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTGTTGTGCAGGTCAGCTaGCTTTCTTTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTVVQVS*LSFQIH
Trigger: GTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAAC...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CCA 90 bp AACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCGTTGTGCAGGTCAGCTaGCTTTCTTTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: NSQIPRVCYIGEDDTTCCVVQVS*LSFQIH
Trigger: GTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAAC...GCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGCAGCGCAGCATTCCTaGCACTGCAACAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSAAQHS*HCNKLR
Trigger: TCTCAGTTTGTTGCAGTGCCAGGAATGCTGCGCTGC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATTCCAATCCGAGTCCTTaGAATTCTGCAGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDSNPSP*NSADFS
Trigger: AGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGA...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATCAATACCTTCTCTCTaGGCCAAACTCAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLSIPSL*AKLRSR
Trigger: CCTGCTTCTGAGTTTGGCCCAGAGAGAAGGTATTGA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTGAGGAAGTGAGAAGGTaGGTCTTGACCACATGGAGC +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAEEVRR*VLTTWS
Trigger: GCTCCATGTGGTCAAGACCCACCTTCTCACTTCCTC...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CCA 90 bp AGATCTGACGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTTTCATGCCCAGATTAAGTTTTaGCATCCGAAGCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: RSDVRRDFHAHVLNLLFHAQIKF*HPKPNW
Trigger: CCAGTTTGGCTTCGGATGCCAAAACTTAATCTGGGC...ATGAAAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTGCTGGAGGAAATCCATaGAGGCTTCTTGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTAGGNP*RLLVGR
Trigger: TCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGC...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR TCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTGCGCCTCAAGGCAGTaGTACAGAGGAGTCTATGAA +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSCASRQ*YRGVYE
Trigger: TTCATAGACTCCTCTGTATCACTGCCTTGAGGCGCA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAAGAATGTGTCTCAAGTaGCTTTCCAGTCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERRMCLK*LSSLAL
Trigger: AAGGGCCAGACTGGAAAGTCACTTGAGACACATTCT...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTATTACAGGCTACAGTTaGATCAGGCAGGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSITGYS*IRQEQL
Trigger: CAGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAAT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGATCGGGGAAGGATTTCTaGGTACAGCAGGATTTCACA +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERSGKDF*VQQDFT
Trigger: TGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGA...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATCCAGTTGCTGAATTCTaGACATCCAATCCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNPVAEF*TSNPSP
Trigger: AGGACTCGGATTGGATGTTCAGAATTCAGCAACTGG...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAAGAAGCAGGCATTGCTaGCTAGACAGTGAATTCAAC +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLRSRHC*LDSEFN
Trigger: GTTGAATTCACTGTCTAGTCAGCAATGCCTGCTTCT...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGGCTTTGGATCCATCATaGTTTTACTTATCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKALDPS*FYLSSL
Trigger: TAAGCTGGATAAGTAAAATCATGATGGATCCAAAGC...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGACTGGGAGATGCATACTaGCAAAGGGGAAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERLGDAY*QRGRMC
Trigger: ACACATTCTTCCCCTTTGTCAGTATGCATCTCCCAG...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp GAAAGGAAAAGAAGGCAAGAAGGAATACAATCCACTTCTGTTCTTCTAGGCATGGGGTTAACCACCCACTaGATTTTCTCCAAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ERKRRQEGIQSTSVLLGMGLTTH*IFSKDR
Trigger: CCTGTCCTTGGAGAAAATTCAGTGGGTGGTTAACCC...CATGCCTAGAAGAACAGAAGTGGATTGTATTCCTTCTTGCCTTCTTTTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp GAAATCCAAAGAGATAGGGGCCAAGGGCTGGCCTTTGTTCTTTCATTGGCCATCATTTGCTCTTTCATATaGAAACAGTTAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: EIQRDRGQGLAFVLSLAIICSFI*KQLAPT
Trigger: TGTGGGAGCTAACTGTTTTCATATGAAAGAGCAAAT...GATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGCCCCTATCTCTTTGGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp AGTAAGTGCAATGATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTAAGGACAGTTGCCGATaGTTTCTCCATCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SKCNDSKKVTSLLATSTSKDSCR*FLHRFQ
Trigger: CTGGAATCGATGGAGAAAGCATCGGCAACTGTCCTT...AGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATCATTGCACTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTGGATTCCCGGTGTTTTaGAGCCAGTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAGFPVF*SQFGVL
Trigger: AAGTACCCCAAACTGGCTGCAAAACACCGGGAATCC...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGCCGGGATATCATAGTTaGGGTATTTCTTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLPGYHS*GISWPQ
Trigger: TTGTGGCCAAGAAATACCGCAACTATGATATCCCGG...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGATCTCACTGTCAGCTaGACAGGTGTTGGTGAACTC +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSDLTVS*TGVGEL
Trigger: GAGTTCACCAACACCTGTGCAGCTGACAGTGAGATC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTTTGACTCTTGCTTCTaGCTTCGTCTCCCACTACCC +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSFDSCF*LRLPLP
Trigger: GGGTAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATTCTGAGTTTGACTCTTaGTTCTGCCTTCGTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNSEFDS*FCLRLP
Trigger: TGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGA...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAGCAGCTTCCTGCCTCTaGCTCTCTCTTAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERAASCL*LSLSSI
Trigger: AATAGAACTAAGAGAGAGGCAGAGGCAGGAAGCTGC...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp GTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGGAACCGACGGGCGTTaGCCAGAAAATCAGAATAAT +
Preference number: 4 (lower is better)
Translates to: VAQKIRIIAVLPVTFQELGTDGR*PENQNN
Trigger: ATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCC...TAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CCA 90 bp TGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGAGTTGTGCAGGTCAGCTaGCTTTCTTTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: CPENQNNSSVAGDISRARVVQVS*LSFQIH
Trigger: GTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAAC...TCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTGTAGGCAGAAAACTTaGAAAAGATGTCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLCRQKT*KRCRCP
Trigger: CGGGCATCGACATCTTTTCCAAGTTTTCTGCCTACA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp ATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTACTTCCCCACAAGTGTTaGCGTCAATCTCCTCTGGTA +
Preference number: 4 (lower is better)
Translates to: IPRVCYIGEDDTTCCKWLLPHKC*RQSPLV
Trigger: TACCAGAGGAGATTGACGCCAACACTTGTGGGGAAG...TAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAACAATCTTGACCACATaGAGCTTGGGCAACAGATTG +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLTILTT*SLGNRL
Trigger: CAATCTGTTGCCCAAGCTCCATGTGGTCAAGATTGT...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTCCAATCCGAGTCCTTaGAATTCTGCAGACTTCTCT +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLSNPSP*NSADFS
Trigger: AGAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTAGATCAAGACTTCACTaGCCCCACCAGCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSRSRLH*PHQHKK
Trigger: CTTCTTGTGCTGGTGGGGCCAGTGAAGTCTTGATCT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTATGGATAGAAGACAATaGGGCTGTGTGCAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSMDRRQ*GCVQQV
Trigger: GACCTGCTGCACACAGCCCCATTGTCTTCTATCCAT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTAGTAAGTGCAATGTCTTGCAGGCCCCTGTaGGTAGAGCTCTCTTACCTT +
Preference number: 4 (lower is better)
Translates to: CYIGEDDTTCCKWLVSAMSCRPL*VELSYL
Trigger: AAGGTAAGAGAGCTCTACCCACAGGGGCCTGCAAGA...CATTGCACTTACTAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp CTGTATACAACAACGATAATTGCGACTATTACACATATTAAGCCCCCACAATATGGCCTAAGATGGAGCTaGATCTTGCAGGCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LYTTTIIATITHIKPPQYGLRWS*ILQAPV
Trigger: CACAGGGGCCTGCAAGATCCAGCTCCATCTTAGGCC...ATATTGTGGGGGCTTAATATGTGTAATAGTCGCAATTATCGTTGTTGTATACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp AACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCGAGGAAGTGAGAAGGTaGGTCTGTGCACAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: NSQIPRVCYIGEDDTTCCEEVRR*VCAQRK
Trigger: TTTTCTTTGTGCACAGACCCACCTTCTCACTTCCTC...GCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCTTGCTGACTAGACAGTaGATTCAACTCAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTLLTRQ*IQLSHS
Trigger: AGAATGACTGAGTTGAATTCACTGTCTAGTCAGCAA...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGGCACATGTCTTTCTCTaGTGCTTTCTTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: QALLISGTLIWSRSISGMAHVFL*CFLKIL
Trigger: GAGAATCTTAAGAAAGCATCAGAGAAAGACATGTGC...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTGAGGGGGCCAGACAATaGATGTTCAAGCCAAACTCT +
Preference number: 4 (lower is better)
Translates to: KYILLLMLVFPFLFVSRAEGARQ*MFKPNS
Trigger: AGAGTTTGGCTTGAACATTCATTGTCTGGCCCCCTC...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR GCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTAAGGACAGTTGCCGATaGTTTCTCCATCGATTCCAG +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAKDSCR*FLHRFQ
Trigger: CTGGAATCGATGGAGAAAGCATCGGCAACTGTCCTT...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTGAGAGAAAGGACAGTTaGCGATGCTTTCTCCATCGA +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAERKDS*RCFLHR
Trigger: TCGATGGAGAAAGCATCGGCAACTGTCCTTTCTCTC...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGCAGCTTCCTGCCTCTaGCTCTCTCTTAGTTCTATT +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSAASCL*LSLSSI
Trigger: AATAGAACTAAGAGAGAGGCAGAGGCAGGAAGCTGC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGTTGTGCAGGTCAGCTaGCTTTCTTTTCAGATCCAC +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSVVQVS*LSFQIH
Trigger: GTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAAC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATATTTCTTTAGAGCCTTaGTTAGGCCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDISLEP*LGLFQE
Trigger: CTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAAT...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCTTGTTGATATTTCTATaGAAAGGACCCGTGCTATCC +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTLLIFL*KGPVLS
Trigger: GGATAGCACGGGTCCTTTCCATAGAAATATCAACAA...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAAGAAGAAACTGTGCTTTaGATCCATCATGATTTTACT +
Preference number: 4 (lower is better)
Translates to: HLGASPFTSEHYRRGIVEEETVL*IHHDFT
Trigger: AGTAAAATCATGATGGATCCAAAGCACAGTTTCTTC...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTCTTGATGGCAGTCTTTaGGTTGAAATCCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTLDGSL*VEILAL
Trigger: AAGAGCTAGGATTTCAACCCAAAGACTGCCATCAAG...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
3UTR CAA 72 bp AAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTaGCTTAGTGCTAGGTCACTCTACCTCTCGTTTAAA +
Preference number: 4 (lower is better)
Translates to: KLMDSVSDISAH*LSARSLYLSFK
Trigger: TTTAAACGAGAGGTAGAGTGACCTAGCACTAAGCAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
3UTR CAA 72 bp CCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTTaGAAGCAGGGGTATAAATATATATGTGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PWRLLVGRTIRT*KQGYKYICACE
Trigger: CTCACAGGCACATATATATTTATACCCCTGCTTCAAAGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR TCA 90 bp CTGTATACAACAACGATAATTGCGACTATTACACATATTAAGCCCCCACAATATTCAGCCAGAGGATCATaGAGAGGCGCTGAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: LYTTTIIATITHIKPPQYSARGS*RGAERK
Trigger: CTTTCTCTCAGCGCCTCTTCATGATCCTCTGGCTGA...ATATTGTGGGGGCTTAATATGTGTAATAGTCGCAATTATCGTTGTTGTATACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATTCTGAGAAGGTATTTTaGTATTGGCAGAAGAAGCTA +
Preference number: 4 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDSEKVF*YWQKKL
Trigger: TAGCTTCTTCTGCCAATATCAAAATACCTTCTCAGA...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATCTTTTGAGGTGGAAATaGATCAACTCATTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNLLRWK*INSFRL
Trigger: AAGGCGGAATGAGTTGATTCATTTCCACCTCAAAAG...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGATCAAATGGCTATCATTaGTCATATAACACCCCCACC +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERSNGYH*SYNTPT
Trigger: GGTGGGGGTGTTATATGATCAATGATAGCCATTTGA...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATACTGTTGCTGAGACATaGTGTGCTGCACATATGATA +
Preference number: 4 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNTVAET*CAAHMI
Trigger: TATCATATGTGCAGCACATCATGTCTCAGCAACAGT...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCTTCTTTATCAGGAGATaGAGAAACTGTGCTTTGGAT +
Preference number: 4 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTFFIRR*RNCALD
Trigger: ATCCAAAGCACAGTTTCTTCATCTCCTGATAAAGAA...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGGCACATGTCTTTCTCTaGTGCTTTCTTAAGATTCTC +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLAHVFL*CFLKIL
Trigger: GAGAATCTTAAGAAAGCATCAGAGAAAGACATGTGC...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTTGGCAGTCTTTGGGTTaGAATCCTAGCTCTTATTGC +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAWQSLG*NPSSYC
Trigger: GCAATAAGAGCTAGGATTTCAACCCAAAGACTGCCA...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR TCA 90 bp GTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTTTATATAGGAGAGGATaGCACTACATGCTGCAAATG +
Preference number: 4 (lower is better)
Translates to: VLSNSQIPRVCYIGEDDTLYRRG*HYMLQM
Trigger: CATTTGCAGCATGTAGTGTCATCCTCTCCTATATAA...AGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp AGTAAGTGCAATGATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTGGAGATTGTTTTGGATaGCCTCTAAATGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SKCNDSKKVTSLLATSTSGDCFG*PLNVLS
Trigger: GGAAAGGACATTTAGAGGTCATCCAAAACAATCTCC...AGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATCATTGCACTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp GATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTTCATTTGATAGATGTCTTCAAATGAGGTaGAGGCAAGCAAAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DSKKVTSLLATSTSSFDRCLQMR*RQAKLF
Trigger: GAACAGCTTTGCTTGCCTTCACCTCATTTGAAGACA...TCTATCAAATGAAGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTAGAGCAGCATTGTTCTaGTGCTTGGTATTTTTGATG +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTRAALF*CLVFLM
Trigger: CATCAAAAATACCAAGCAGCAGAACAATGCTGCTCT...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTCCGGGATATCATAGTTaGGGTATTTCTTGGCCACAA +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSPGYHS*GISWPQ
Trigger: TTGTGGCCAAGAAATACCGCAACTATGATATCCCGG...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTTAAGTACCCAGAAGTaGCTTCCTTCTGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSLSTQK*LPSVLL
Trigger: GAGGAGTACAGAAGGAAGGCACTTCTGGGTACTTAA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAACATTTCAGCTCATTTaGTTAGTGCTAGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLTFQLI*LVLGHS
Trigger: AGAGTGACCTAGCACTAAGCAAATGAGCTGAAATGT...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTAGTAAGTGCAATGGAATGGGGGAAGAAGTaGTCATTGACAGAGCTTAGG +
Preference number: 4 (lower is better)
Translates to: CYIGEDDTTCCKWLVSAMEWGKK*SLTELR
Trigger: CCTAAGCTCTGTCAATGAGCACTTCTTCCCCCATTC...CATTGCACTTACTAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTCATTTTCTTCTGGCTaGTCTGGAACCTCATACGTC +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSSFSSG*SGTSYV
Trigger: GACGTATGAGGTTCCAGACCAGCCAGAAGAAAATGA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTTGTAGGCAGAAAACTTaGAAAAGATGTCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILACRQKT*KRCRCP
Trigger: CGGGCATCGACATCTTTTCCAAGTTTTCTGCCTACA...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CCA 90 bp ATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTATGTAGGCAGAAAACTTaGAAAAGATGTCGATGCCCG +
Preference number: 4 (lower is better)
Translates to: IPRVCYIGEDDTTCCKWLCRQKT*KRCRCP
Trigger: CGGGCATCGACATCTTTTCCAAGTTTTCTGCCTACA...TAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAATTTCTTTAGAGCCTTaGTTAGGCCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLISLEP*LGLFQE
Trigger: CTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAAT...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATTGGTCCAGGTTGAAGTaGGAGATTGTTTTGGATGAC +
Preference number: 4 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYWSRLK*EIVLDD
Trigger: GTCATCCAAAACAATCTCCCACTTCAACCTGGACCA...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp TGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTAGTAAGTGCAATGAGGGTCAGGAAAGAATaGGGGAAGAAGTGCTCATTG +
Preference number: 4 (lower is better)
Translates to: CYIGEDDTTCCKWLVSAMRVRKE*GKKCSL
Trigger: CAATGAGCACTTCTTCCCCCATTCTTTCCTGACCCT...CATTGCACTTACTAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTCTTTTGAGGTGGAAATaGATCAACTCATTCCGCCTT +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSLLRWK*INSFRL
Trigger: AAGGCGGAATGAGTTGATTCATTTCCACCTCAAAAG...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTAGCCAGTACAGACAATaGGTTCCACATTTAGAAATT +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTSQYRQ*VPHLEI
Trigger: AATTTCTAAATGTGGAACTCATTGTCTGTACTGGCT...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR TCA 90 bp CTGTATACAACAACGATAATTGCGACTATTACACATATTAAGCCCCCACAATATGGAAGAAGTGCTCATTaGCAGAGCTTAGGGGGATAC +
Preference number: 4 (lower is better)
Translates to: LYTTTIIATITHIKPPQYGRSAH*QSLGGY
Trigger: GTATCCCCCTAAGCTCTGTCAATGAGCACTTCTTCC...ATATTGTGGGGGCTTAATATGTGTAATAGTCGCAATTATCGTTGTTGTATACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGAAAAGGAGTTGGTGTTaGATGTTTCTAAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLKRSWC*MFLKHL
Trigger: CAGATGCTTTAGAAACATGCAACACCAACTCCTTTT...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAGAGATGAAGAAACTGTaGTTTGGATCCATCATGATT +
Preference number: 4 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLEMKKL*FGSIMI
Trigger: AATCATGATGGATCCAAAGCACAGTTTCTTCATCTC...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAACATTTCAGCTCATTTaGTTAGTGCTAGGTCACTCT +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERTFQLI*LVLGHS
Trigger: AGAGTGACCTAGCACTAAGCAAATGAGCTGAAATGT...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTTGTTTGTCTCCAGGGCTTCGCAGGGACTTCCATaGTCATGTTCTGAATTTGCT +
Preference number: 4 (lower is better)
Translates to: KYILLLMLVFPFLFVSRASQGLP*SCSEFA
Trigger: AGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGA...AGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CCA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAGTTCTGTTTTCTCTGTaGCAATTGGCTATGATTCAC +
Preference number: 4 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERVLFSL*QLAMIH
Trigger: GTGAATCATAGCCAATTGCCACAGAGAAAACAGAAC...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CCA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTCATAAGCAACTGTTGTaGGCCTCATACTATATCTTA +
Preference number: 4 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTHKQLL*ASYYIL
Trigger: TAAGATATAGTATGAGGCCCACAACAGTTGCTTATG...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR TCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTGGAAAGGTTCCTTTTaGGGTGGAAATGAATCAACT +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSWKGSF*GGNEST
Trigger: AGTTGATTCATTTCCACCTCAAAAGGAACCTTTCCA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR TCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTATATATATGTGCCTGTaGGACTTGATGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAIYMCL*DLMAVF
Trigger: AAAGACTGCCATCAAGTCTCACAGGCACATATATAT...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR TCA 90 bp ATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCAAATGGTTATTTATAAATGAAAACTaGAGCTCAAGGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: IPRVCYIGEDDTTCCKWLFINEN*SSRRPH
Trigger: GTGTGGCCTCCTTGAGCTTCAGTTTTCATTTATAAA...TAACCATTTGCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATGCCTTTGGAGTGATATaGCTGTATACAACAACGATA +
Preference number: 4 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYAFGVI*LYTTTI
Trigger: TATCGTTGTTGTATACAGTCATATCACTCCAAAGGC...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR TCA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATAAGAGGCCTTTGGAGTaGTATGACTGTATACAACAA +
Preference number: 4 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYKRPLE*YDCIQQ
Trigger: TTGTTGTATACAGTCATATCACTCCAAAGGCCTCTT...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTAGAGCAGCATTGTTCTaGTGCTTGGTATTTTTGATG +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSRAALF*CLVFLM
Trigger: CATCAAAAATACCAAGCAGCAGAACAATGCTGCTCT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR GCA 90 bp GTCCTTTCCAACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTCAAATGGTTAGTAAGTaGAATGATAGCAAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VLSNSQIPRVCYIGEDDTQMVSK*NDSKKV
Trigger: CACTTTCTTGCTATCATTGCACTTACTAACCATTTG...AGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTTGGAAAGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR GCA 90 bp CAGGGAGGCATGCTTGGGCTCATTGTAAAGAACAATGATTTAATAATCAGAGCTGATGACACTACATGCTaGAAATGGTTAGTAAGTGCA +
Preference number: 4 (lower is better)
Translates to: QGGMLGLIVKNNDLIIRADDTTC*KWLVSA
Trigger: TGCACTTACTAACCATTTGCAGCATGTAGTGTCATC...AGCTCTGATTATTAAATCATTGTTCTTTACAATGAGCCCAAGCATGCCTCCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTATTTCTTTAGAGCCTTaGTTAGGCCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAISLEP*LGLFQE
Trigger: CTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAAT...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CCA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATATTTCTTTAGAGCCTTaGTTAGGCCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYISLEP*LGLFQE
Trigger: CTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAAT...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp CAGGGAGGCATGCTTGGGCTCATTGTAAAGAACAATGATTTAATAATCAGAGCTATGAGGAAAATAATGTaGGCTCACCTTAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: QGGMLGLIVKNNDLIIRAMRKIM*AHLRKL
Trigger: CAACTTCCTAAGGTGAGCCCACATTATTTTCCTCAT...AGCTCTGATTATTAAATCATTGTTCTTTACAATGAGCCCAAGCATGCCTCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp AACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCACTACATGCTGCAAATaGTTAGTAAGTGCAATGATA +
Preference number: 4 (lower is better)
Translates to: NSQIPRVCYIGEDDTTCCTTCCK*LVSAMI
Trigger: TATCATTGCACTTACTAACCATTTGCAGCATGTAGT...GCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
3UTR CAA 72 bp AAATATATACTTCTATTGATGTTGGTGTTCCCCTTCTaGTTTGTCTCCAGGGCTGAACATCGTCACTATGCT +
Preference number: 4 (lower is better)
Translates to: KYILLLMLVFPF*FVSRAEHRHYA
Trigger: AGCATAGTGACGATGTTCAGCCCTGGAGACAAACAAGAAGGGGAACACCAACATCAATAGAAGTATATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR TCA 90 bp CTGTATACAACAACGATAATTGCGACTATTACACATATTAAGCCCCCACAATATTATCTGATACTAGGCTaGCGAGGGTCAGGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: LYTTTIIATITHIKPPQYYLILG*RGSGKN
Trigger: ATTCTTTCCTGACCCTCGTCAGCCTAGTATCAGATA...ATATTGTGGGGGCTTAATATGTGTAATAGTCGCAATTATCGTTGTTGTATACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CCA 90 bp GAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGACATGAAATTTCTTTAGAGCCTTaGTTAGGCCTCTTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: ENQNNSSVAGDISRARHEISLEP*LGLFQE
Trigger: CTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAAT...TTCATGTCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CCA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTGAAGAAACTGTGCTTTaGATCCATCATGATTTTACT +
Preference number: 4 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSEETVL*IHHDFT
Trigger: AGTAAAATCATGATGGATCCAAAGCACAGTTTCTTC...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGGGGGCTTTCCAGCACTaGGGAGCCTCACCCTTTACC +
Preference number: 5 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQGAFQH*GASPFT
Trigger: GGTAAAGGGTGAGGCTCCCAAGTGCTGGAAAGCCCC...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GGCCAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCTGAAAGCGAGCCACGCGTCTTCACGTCCCCGTaGAAGGTCAGGAAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: GQSNSASRDGDKPESEPRVFTSP*KVRKGG
Trigger: CCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGAC...GCGTGGCTCGCTTTCAGGTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGGACCCCGTGGGTATTTaGGCATCAACACTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQDPVGI*ASTLLP
Trigger: GGGGAGCAGTGTTGATGCCAAAATACCCACGGGGTC...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTGCTAGTGGTACTTGTTCCTaGACCACATGGAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GLQMPLPTKTCAPWALAASGTCS*TTWSLG
Trigger: GCCCAAGCTCCATGTGGTCAAGGAACAAGTACCACT...AGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGGGATGCTGCACCACCTaGCAGAGGAATCAACGAGCT +
Preference number: 5 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQGCCTT*QRNQRA
Trigger: AGCTCGTTGATTCCTCTGCAAGGTGGTGCAGCATCC...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp GGGCCAGACAATGAATGTTCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCGTGCCGGGGGCTAGGTaGTGCAGGTCAGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: GPDNECSSQTLMESLGQSVPGAR*CRSAGF
Trigger: AAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCAC...GCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGAACATTCATTGTCTGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp TGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGGAGTCTGTCATGCCGTaGGCGCCCGGGGCTACCGTC +
Preference number: 5 (lower is better)
Translates to: CSREPTGVAQKIRIIAVLESVMP*APGATV
Trigger: GACGGTAGCCCCGGGCGCCAACGGCATGACAGACTC...CAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp GAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAAGAGTCTGTCATGCCGTaGGCGCCCGGGGCTACCGTC +
Preference number: 5 (lower is better)
Translates to: EGDLGSLLPDFRVQVLDQESVMP*APGATV
Trigger: GACGGTAGCCCCGGGCGCCAACGGCATGACAGACTC...TTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp GGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTGCTTTGGTGTTCCCCTTCTaGTTTGTCTCCAGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: GLQMPLPTKTCAPWALAALVFPF*FVSRAE
Trigger: TTCAGCCCTGGAGACAAACAAGAAGGGGAACACCAA...AGCAGCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS TCA 90 bp CGCAGCCTCAGGTTTCCCTACTTCTGCAGCGTCGGCACCAAGGGCTaGTCAAATGTTTCTTTCTCCTTACACCGGCGGACCGGGAAACGC +
Preference number: 5 (lower is better)
Translates to: RSLRFPYFCSVGTKG*SNVSFSLHRRTGKR
Trigger: GCGTTTCCCGGTCCGCCGGTGTAAGGAGAAAGAAACATTTGATCAGCCCTTGGTGCCGACGCTGCAGAAGTAGGGAAACCTGAGGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464137.1
CDS-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGTGCCGGGGGCTAGGTaGTGCAGGTCAGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHVPGAR*CRSAGF
Trigger: AAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCAC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAGTCTTCACGTCCCCGTaGAAGGTCAGGAAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSVFTSP*KVRKGG
Trigger: CCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGAC...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTCCCCATCCAGGAACTaGCGCCGGGACCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSSPSRN*RRDPLS
Trigger: AGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTTCCCCATCCAGGAACTaGCGCCGGGACCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: QGTDGRCPENQNNSSVAGSPSRN*RRDPLS
Trigger: AGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGA...ACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAGGCCTCACCGGAGGCTaGGTTCTGTTTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVGLTGG*VLFSLW
Trigger: CCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCC...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS TCA 90 bp GTTCTTGACCAACAGGTGGTACTGTCCTTGACTCATCCACACAGGTaGCCTGGGCCTAAGATGGAGCTGGATCTTGCAGGCCCCTGTGGG +
Preference number: 5 (lower is better)
Translates to: VLDQQVVLSLTHPHR*PGPKMELDLAGPCG
Trigger: CCCACAGGGGCCTGCAAGATCCAGCTCCATCTTAGGCCCAGGTCACCTGTGTGGATGAGTCAAGGACAGTACCACCTGTTGGTCAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTGGGGCTTTCCAGCACTaGGGAGCCTCACCCTTTACC +
Preference number: 5 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGGAFQH*GASPFT
Trigger: GGTAAAGGGTGAGGCTCCCAAGTGCTGGAAAGCCCC...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGCCTCACCAGTTCTCCTaGTTAAACATCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQPHQFS*LNISRA
Trigger: TGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGG...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTACCTGGCCAGTGGGAATaGAGGCGAGTCACAGAAGTA +
Preference number: 5 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVPGQWE*RRVTEV
Trigger: TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGG...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTGTGCCGGGGGCTAGGTaGTGCAGGTCAGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: PTGVAQKIRIIAVLPVTFVPGAR*CRSAGF
Trigger: AAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCAC...AAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTACTCCCTGAGTTGTTCTaGGGACACCTAAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVLPELF*GHLRTS
Trigger: TGAGGTCCTTAGGTGTCCCAAGAACAACTCAGGGAG...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTCCCGTGCTCCCTGAGTaGTTCTTGGGACACCTAAGG +
Preference number: 5 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGPVLPE*FLGHLR
Trigger: CCTTAGGTGTCCCAAGAACAACTCAGGGAGCACGGG...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGGAGTCTGTCATGCCGTaGGCGCCCGGGGCTACCGTC +
Preference number: 5 (lower is better)
Translates to: QALLISGTLIWSRSISGMESVMP*APGATV
Trigger: GACGGTAGCCCCGGGCGCCAACGGCATGACAGACTC...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339561.12
CDS-3UTR CAA 90 bp GAAAGGCCTGCAGATGCCTCTCCCAACGAAGACCTGTGCACCCTGGGCCTTGGCTCTTCACACATTGGCTaGACTTTGGGAGATGAGAAC +
Preference number: 5 (lower is better)
Translates to: ERPADASPNEDLCTLGLGSSHIG*TLGDEN
Trigger: GTTCTCATCTCCCAAAGTCAAGCCAATGTGTGAAGA...GCCAAGGCCCAGGGTGCACAGGTCTTCGTTGGGAGAGGCATCTGCAGGCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS GCA 90 bp AGAGTTGCTGGTCCTGGGTTGATGAATATAACCCTTCCATTGAGATaGCCCTGTCCTCCTGGGGCTCACCTGGATGAGCCTCCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: RVAGPGLMNITLPLR*PCPPGAHLDEPPGV
Trigger: AACTCCAGGAGGCTCATCCAGGTGAGCCCCAGGAGGACAGGGGCATCTCAATGGAAGGGTTATATTCATCAACCCAGGACCAGCAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp AGGAAAATAATGTGGGCTCACCTTAGGAAGTTGCTGGAGGAAGTGAGAAGGTGGGTGCCGGGGGCTAGGTaGTGCAGGTCAGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: RKIMWAHLRKLLEEVRRWVPGAR*CRSAGF
Trigger: AAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCAC...CCACCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGCCCACATTATTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATTGGATTCCCGGTGTTTaGCAGCCAGTTTGGGGTACT +
Preference number: 5 (lower is better)
Translates to: SSQTLMESLGQSNSASRDWIPGV*QPVWGT
Trigger: AGTACCCCAAACTGGCTGCAAAACACCGGGAATCCA...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACTCGATGCCCGCTGTGTaGGATTCCCGGTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHSMPAV*DSRCFA
Trigger: TGCAAAACACCGGGAATCCAACACAGCGGGCATCGA...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACTCCCCATCCAGGAACTaGCGCCGGGACCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDSPSRN*RRDPLS
Trigger: AGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGA...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp AGATCTGACGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTTTCATGAGTCTGTCATGCCGTaGGCGCCCGGGGCTACCGTC +
Preference number: 5 (lower is better)
Translates to: RSDVRRDFHAHVLNLLFHESVMP*APGATV
Trigger: GACGGTAGCCCCGGGCGCCAACGGCATGACAGACTC...ATGAAAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp GGCCAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCTGAAAGCGAGCCACGCCCCTTTCAGTGGTACTaGTTCCTTGACCACATGGAG +
Preference number: 5 (lower is better)
Translates to: GQSNSASRDGDKPESEPRPFQWY*FLDHME
Trigger: CTCCATGTGGTCAAGGAACAAGTACCACTGAAAGGG...GCGTGGCTCGCTTTCAGGTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS CCA 90 bp ACACTCCCATTCTCCTGGAGTTCTGCTGCGCAGAGTTGCTGGTCCTaGGTTGATGAATATAACCCTTCCATTGAGATGCCCCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TLPFSWSSAAQSCWS*VDEYNPSIEMPLSS
Trigger: GGAGGACAGGGGCATCTCAATGGAAGGGTTATATTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGAACTCCAGGAGAATGGGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGCTTTCAAGAGCAGCATaGTTCTGCTGCTTGGTATTT +
Preference number: 5 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQLSRAA*FCCLVF
Trigger: AAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAG...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTTCTTGGCCACAATCTaGACCACATGGAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSFLATI*TTWSLG
Trigger: GCCCAAGCTCCATGTGGTCAAGATTGTGGCCAAGAA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GGCCAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCTGAAAGCGAGCCACGCTTGGCCATCTTCTTTTaGATCTCCAGCTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GQSNSASRDGDKPESEPRLAIFF*ISSFSG
Trigger: CCCAGAGAAGCTGGAGATCAAAAAGAAGATGGCCAA...GCGTGGCTCGCTTTCAGGTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAGTGCCGGGGGCTAGGTaGTGCAGGTCAGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLVPGAR*CRSAGF
Trigger: AAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCAC...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTGTGCCGGGGGCTAGGTaGTGCAGGTCAGCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTVPGAR*CRSAGF
Trigger: AAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCAC...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTGTCTTCACGTCCCCGTaGAAGGTCAGGAAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTVFTSP*KVRKGG
Trigger: CCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGAC...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp GAGGGTGACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAATGGATTCCCGGTGTTTaGCAGCCAGTTTGGGGTACT +
Preference number: 5 (lower is better)
Translates to: EGDLGSLLPDFRVQVLDQWIPGV*QPVWGT
Trigger: AGTACCCCAAACTGGCTGCAAAACACCGGGAATCCA...TTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGTCACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAATCGATGCCCGCTGTGTaGGATTCCCGGTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: HLGASPFTSEHYRRGIVESMPAV*DSRCFA
Trigger: TGCAAAACACCGGGAATCCAACACAGCGGGCATCGA...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATTCTTCCCCACAAGTGTaGGCGTCAATCTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYSSPQV*ASISSG
Trigger: ACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGA...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CACTTGGGAGCCTCACCCTTTACCAGCGAACACTATAGAAGGGGGATTGTTGAATCAGCTGCACAGGTGTaGGTGAACTCATCACGGGCA +
Preference number: 5 (lower is better)
Translates to: HLGASPFTSEHYRRGIVESAAQV*VNSSRA
Trigger: TGCCCGTGATGAGTTCACCAACACCTGTGCAGCTGA...TTCAACAATCCCCCTTCTATAGTGTTCGCTGGTAAAGGGTGAGGCTCCCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGGTCTTAGGGGAGTGGTaGAGTCCTTCTGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: QALLISGTLIWSRSISGMVLGEW*SPSAAG
Trigger: CCCCGCTGCAGAAGGACTCAACCACTCCCCTAAGAC...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCGTCTTAGGGGAGTGGTaGAGTCCTTCTGCAGCGGGG +
Preference number: 5 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTVLGEW*SPSAAG
Trigger: CCCCGCTGCAGAAGGACTCAACCACTCCCCTAAGAC...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACAGACTGAAGCTGTGTTaGCCAGACACCCAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHRLKLC*PDTQVH
Trigger: ATGGACTTGGGTGTCTGGCAAACACAGCTTCAGTCT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGACTGGGAAGACATTTTaGACCCATTCTTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQTGKTF*THSWVF
Trigger: AAAAACCCAAGAATGGGTCAAAAATGTCTTCCCAGT...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGATAGAAGGGGGATTGTaGAAGGTAAGGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: PANTIEGGLLKVRACGKWIEGGL*KVRACG
Trigger: GCCACAGGCCCTTACCTTCAACAATCCCCCTTCTAT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACCCTCACCAGTTCTCCTaGTTAAACATCTCCAGGGCA +
Preference number: 5 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHPHQFS*LNISRA
Trigger: TGCCCTGGAGATGTTTAACAAGGAGAACTGGTGAGG...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGTGCTTTCTGAGCGATTaGTATTCATTCAGGACCAAT +
Preference number: 5 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQCFLSD*YSFRTN
Trigger: ATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCA...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTATCAGTCATTCTGAGTTaGACTCTTGCTTCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVSVILS*TLASAF
Trigger: GAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGA...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCACTAAGATGCTTGGTATaGTCTGTCTGTGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSLRCLV*SVCGVA
Trigger: GGCCACTCCACAGACAGACAATACCAAGCATCTTAG...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACCTATTTGTCCAGGCCTaGCTGATTTCTGGGACTCTC +
Preference number: 5 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHLFVQA*LISGTL
Trigger: GAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAG...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTCTATTTGTCCAGGCCTaGCTGATTTCTGGGACTCTC +
Preference number: 5 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSLFVQA*LISGTL
Trigger: GAGAGTCCCAGAAATCAGCAAGGCCTGGACAAATAG...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTGAGTCTGTCATGCCGTaGGCGCCCGGGGCTACCGTC +
Preference number: 5 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAESVMP*APGATV
Trigger: GACGGTAGCCCCGGGCGCCAACGGCATGACAGACTC...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS GCA 90 bp TCCTTCATCACACTCCCATTCTCCTGGAGTTCTGCTGCGCAGAGTTaGTGGTCCTGGGTTGATGAATATAACCCTTCCATTGAGATGCCC +
Preference number: 5 (lower is better)
Translates to: SFITLPFSWSSAAQS*WSWVDEYNPSIEMP
Trigger: GGGCATCTCAATGGAAGGGTTATATTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGAACTCCAGGAGAATGGGAGTGTGATGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS CCA 90 bp TTCATCACACTCCCATTCTCCTGGAGTTCTGCTGCGCAGAGTTGCTaGTCCTGGGTTGATGAATATAACCCTTCCATTGAGATGCCCCTG +
Preference number: 5 (lower is better)
Translates to: FITLPFSWSSAAQSC*SWVDEYNPSIEMPL
Trigger: CAGGGGCATCTCAATGGAAGGGTTATATTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGAACTCCAGGAGAATGGGAGTGTGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAGTCTTCACGTCCCCGTaGAAGGTCAGGAAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERVFTSP*KVRKGG
Trigger: CCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGAC...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGTCTTCACGTCCCCGTaGAAGGTCAGGAAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: VAQKIRIIAVLPVTFQELVFTSP*KVRKGG
Trigger: CCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGAC...TAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp ATAATGTGGGCTCACCTTAGGAAGTTGCTGGAGGAAGTGAGAAGGTGGGTCTGTTCTTCCCCACAAGTGTaGGCGTCAATCTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: IMWAHLRKLLEEVRRWVCSSPQV*ASISSG
Trigger: ACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGA...ACAGACCCACCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGCCCACATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGATCCCCATCCAGGAACTaGCGCCGGGACCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERSPSRN*RRDPLS
Trigger: AGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGA...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATCATTACAGGCTACAGTaGAATCAGGCAGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYHYRLQ*NQAGAA
Trigger: AGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAATG...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAACTATAGAAGGGGGATaGTTGAAGGTAAGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSTIEGG*LKVRAC
Trigger: ACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGT...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGCTCCCTGAGTTGTTCTaGGGACACCTAAGGACCTCA +
Preference number: 5 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKLPELF*GHLRTS
Trigger: TGAGGTCCTTAGGTGTCCCAAGAACAACTCAGGGAG...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATCCCGTGCTCCCTGAGTaGTTCTTGGGACACCTAAGG +
Preference number: 5 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDPVLPE*FLGHLR
Trigger: CCTTAGGTGTCCCAAGAACAACTCAGGGAGCACGGG...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGCTAAGATGCTTGGTATaGTCTGTCTGTGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: PANTIEGGLLKVRACGKWLRCLV*SVCGVA
Trigger: GGCCACTCCACAGACAGACAATACCAAGCATCTTAG...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGGATGACACCAGCATCTaGATTCACCGTGCAGTTGAG +
Preference number: 5 (lower is better)
Translates to: PANTIEGGLLKVRACGKWDDTSI*IHRAVE
Trigger: CTCAACTGCACGGTGAATCAAGATGCTGGTGTCATC...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AATCAGGCAGGAGCAGCTGCTGGAGAGCACCCAGCCGACAGACCTGCATTCCAGAGACTGGAACACAAATaGGTAATTGGTTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: NQAGAAAGEHPADRPAFQRLEHK*VIGSDS
Trigger: TGAATCTGAACCAATTACCAATTTGTGTTCCAGTCT...CTGGAATGCAGGTCTGTCGGCTGGGTGCTCTCCAGCAGCTGCTCCTGCCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGAGCAACTCTGCTTCCAGGGATGGAGATAAACCTGAAAGCGAGCCACGCAAGGATGAAGCCCAAGGCTaGGGAGATTCATTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: QSNSASRDGDKPESEPRKDEAQG*GDSFVC
Trigger: GCAAACAAATGAATCTCCCAAGCCTTGGGCTTCATC...CTTGCGTGGCTCGCTTTCAGGTTTATCTCCATCCCTGGAAGCAGAGTTGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp CAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACACAGTGTGTTCCCCTTCTTGTTaGTCTCCAGGGCTGAACATC +
Preference number: 5 (lower is better)
Translates to: QDRNSGLLIFALYHSDTVCSPSC*SPGLNI
Trigger: GATGTTCAGCCCTGGAGACAAACAAGAAGGGGAACA...CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp CAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTCAACAAAAAGAAAGCTaGACCACATGGAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: QGTDGRCPENQNNSSVAGQQKES*TTWSLG
Trigger: GCCCAAGCTCCATGTGGTCAAGCTTTCTTTTTGTTG...ACCGGCAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS CCA 90 bp CTTGAAGGAGAAGGCAGATCTTCCTTCATCACACTCCCATTCTCCTaGAGTTCTGCTGCGCAGAGTTGCTGGTCCTGGGTTGATGAATAT +
Preference number: 5 (lower is better)
Translates to: LEGEGRSSFITLPFS*SSAAQSCWSWVDEY
Trigger: ATATTCATCAACCCAGGACCAGCAACTCTGCGCAGCAGAACTCCAGGAGAATGGGAGTGTGATGAAGGAAGATCTGCCTTCTCCTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATGTCTTCACGTCCCCGTaGAAGGTCAGGAAGGGCGGG +
Preference number: 5 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYVFTSP*KVRKGG
Trigger: CCCGCCCTTCCTGACCTTCAACGGGGACGTGAAGAC...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGTCTTCCCCACAAGTGTaGGCGTCAATCTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSSSPQV*ASISSG
Trigger: ACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGA...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACTCTTCCCCACAAGTGTaGGCGTCAATCTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDSSPQV*ASISSG
Trigger: ACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGA...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTTCCCCATCCAGGAACTaGCGCCGGGACCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: NIYVPVRLDGSLWVEILASPSRN*RRDPLS
Trigger: AGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGA...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATTCCCCATCCAGGAACTaGCGCCGGGACCCCTTGTCT +
Preference number: 5 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYSPSRN*RRDPLS
Trigger: AGACAAGGGGTCCCGGCGCAAGTTCCTGGATGGGGA...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAAGGGTAGAAAAGGAGTaGGTGTTGCATGTTTCTAAA +
Preference number: 5 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVRVEKE*VLHVSK
Trigger: TTTAGAAACATGCAACACCAACTCCTTTTCTACCCT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACCTCAAAAACCACTCATaGGTAAGCACAGTCAAACCC +
Preference number: 5 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHLKNHS*VSTVKP
Trigger: GGGTTTGACTGTGCTTACCAATGAGTGGTTTTTGAG...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATCATTCCAGAAGCAGCTaGGAGAAACTGGGAAGACAT +
Preference number: 5 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYHSRSS*EKLGRH
Trigger: ATGTCTTCCCAGTTTCTCCAAGCTGCTTCTGGAATG...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGATAGAAGGGGGATTGTaGAAGGTAAGGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSIEGGL*KVRACG
Trigger: GCCACAGGCCCTTACCTTCAACAATCCCCCTTCTAT...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGATCCAATCCGAGTCCTaGGAATTCTGCAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: PANTIEGGLLKVRACGKWIQSES*EFCRLL
Trigger: GAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGAT...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTCAGTCATTCTGAGTTaGACTCTTGCTTCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSSVILS*TLASAF
Trigger: GAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACGACATTTCAGCTCATTaGCTTAGTGCTAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHDISAH*LSARSL
Trigger: GAGTGACCTAGCACTAAGCAAATGAGCTGAAATGTC...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTACAAGATAAAACTAGTTaGGGATCGTGTGGCCAAATA +
Preference number: 5 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVQDKTS*GSCGQI
Trigger: TATTTGGCCACACGATCCCAAACTAGTTTTATCTTG...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACACAGTGGTGAACTTTAGAGGTTaGCCAGGTTTCTGGGATCTG +
Preference number: 5 (lower is better)
Translates to: QDRNSGLLIFALYHSDTVVNFRG*PGFWDL
Trigger: CAGATCCCAGAAACCTGGCAAACCTCTAAAGTTCAC...CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS GCA 90 bp GTGACTCTTCCCTTCTCAGCGATCTGCATATTTCTAGGGAAACTTTaGACTGAGAGAGTTTTCCCCCTTTGTGAAAGGTCTTGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: VTLPFSAICIFLGKL*TERVFPLCERSWRP
Trigger: TGGGCGCCAAGACCTTTCACAAAGGGGGAAAACTCTCTCAGTGCAAAGTTTCCCTAGAAATATGCAGATCGCTGAGAAGGGAAGAGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464137.1
CDS-3UTR CAA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGTCCACAGTGGTGACATaGAACACGACTCCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSSTVVT*NTTPFS
Trigger: GCTGAAAGGAGTCGTGTTCAATGTCACCACTGTGGA...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGTGGATTCCCGGTGTTTaGCAGCCAGTTTGGGGTACT +
Preference number: 5 (lower is better)
Translates to: QALLISGTLIWSRSISGMWIPGV*QPVWGT
Trigger: AGTACCCCAAACTGGCTGCAAAACACCGGGAATCCA...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGCATTCCAGAAGCAGCTaGGAGAAACTGGGAAGACAT +
Preference number: 5 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKHSRSS*EKLGRH
Trigger: ATGTCTTCCCAGTTTCTCCAAGCTGCTTCTGGAATG...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATGGCCTCACCGGAGGCTaGGTTCTGTTTTCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNGLTGG*VLFSLW
Trigger: CCACAGAGAAAACAGAACCAAGCCTCCGGTGAGGCC...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTACCTGGCCAGTGGGAATaGAGGCGAGTCACAGAAGTA +
Preference number: 5 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLPGQWE*RRVTEV
Trigger: TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGG...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CGTGCAGTTGAGATGGCCCCTGGCCAGTGGGAATTGAGGCGAGTCACAGAAGTAATCCCTTGGGAATCATaGTACTTAGTTTTAACCATG +
Preference number: 5 (lower is better)
Translates to: RAVEMAPGQWELRRVTEVIPWES*YLVLTM
Trigger: CATGGTTAAAACTAAGTACAATGATTCCCAAGGGAT...TACTTCTGTGACTCGCCTCAATTCCCACTGGCCAGGGGCCATCTCAACTGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS TCA 90 bp ATACTTGGTGGTAGAGAAGGCCTTACTGTGCTGAATGGTGAAGCTTaGAGGAGAAGGCAGATCTTCCTTCATCACACTCCCATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: ILGGREGLTVLNGEA*RRRQIFLHHTPILL
Trigger: CAGGAGAATGGGAGTGTGATGAAGGAAGATCTGCCTTCTCCTTCAAGCTTCACCATTCAGCACAGTAAGGCCTTCTCTACCACCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS TCA 90 bp ACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTaGCACAGTGTGACTGAGCTGGAATTATATCATCCCTTTCAGTGG +
Preference number: 5 (lower is better)
Translates to: TGPELGSPDLCIVSL*HSVTELELYHPFQW
Trigger: CCACTGAAAGGGATGATATAATTCCAGCTCAGTCACACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486570.2
ENST00000544153.3
CDS-3UTR CAA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTTGGATTCCCGGTGTTTaGCAGCCAGTTTGGGGTACT +
Preference number: 5 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTWIPGV*QPVWGT
Trigger: AGTACCCCAAACTGGCTGCAAAACACCGGGAATCCA...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp TGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGATCGATGCCCGCTGTGTaGGATTCCCGGTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: CPENQNNSSVAGDISRARSMPAV*DSRCFA
Trigger: TGCAAAACACCGGGAATCCAACACAGCGGGCATCGA...TCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp ACCTTGGGTCCTTATTACCTGACTTCAGGGTCCAGGTTCTTGACCAACAGGTGGCTTTCAAGAGCAGCATaGTTCTGCTGCTTGGTATTT +
Preference number: 5 (lower is better)
Translates to: TLGPYYLTSGSRFLTNRWLSRAA*FCCLVF
Trigger: AAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAG...CCACCTGTTGGTCAAGAACCTGGACCCTGAAGTCAGGTAATAAGGACCCAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTTCTTCCCCACAAGTGTaGGCGTCAATCTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTSSPQV*ASISSG
Trigger: ACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGA...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATTCAGCTGCACAGGTGTaGGTGAACTCATCACGGGCA +
Preference number: 5 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNSAAQV*VNSSRA
Trigger: TGCCCGTGATGAGTTCACCAACACCTGTGCAGCTGA...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTGAAACAACTACTCCTAAGCAAGCAAACCCCATGGCTGGTAGACCCCGTGGGTGAAAAGGAGTTGGTGTaGCATGTTTCTAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: LKQLLLSKQTPWLVDPVGEKELV*HVSKAS
Trigger: AGATGCTTTAGAAACATGCAACACCAACTCCTTTTC...ACCCACGGGGTCTACCAGCCATGGGGTTTGCTTGCTTAGGAGTAGTTGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCATATGTGGGCTCTCCAACACTGACTGACCCCAAACATGCTGAGCCCAGATCAAGGGTAGAAAAGGAGTaGGTGTTGCATGTTTCTAAA +
Preference number: 5 (lower is better)
Translates to: PYVGSPTLTDPKHAEPRSRVEKE*VLHVSK
Trigger: TTTAGAAACATGCAACACCAACTCCTTTTCTACCCT...TGATCTGGGCTCAGCATGTTTGGGGTCAGTCAGTGTTGGAGAGCCCACATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTTTTTCACCTGGCAGTaGAGTCAGATTGTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSFFTWQ*SQIVGK
Trigger: TTTTCCTACAATCTGACTCAACTGCCAGGTGAAAAA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GTTTGCCAGACACCCAAGTCCATAGCCAGCTCGGTACTCCTCCATTCACTCTCTTGCTTTCTGAGCGATTaGTATTCATTCAGGACCAAT +
Preference number: 5 (lower is better)
Translates to: VCQTPKSIASSVLLHSLSCFLSD*YSFRTN
Trigger: ATTGGTCCTGAATGAATACAAATCGCTCAGAAAGCA...AGAGAGTGAATGGAGGAGTACCGAGCTGGCTATGGACTTGGGTGTCTGGCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGGACATTTCAGCTCATTaGCTTAGTGCTAGGTCACTC +
Preference number: 5 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKDISAH*LSARSL
Trigger: GAGTGACCTAGCACTAAGCAAATGAGCTGAAATGTC...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATACAGTTCTAAGATGCTaGGTATTGTCTGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYTVLRC*VLSVCG
Trigger: TCCACAGACAGACAATACCAAGCATCTTAGAACTGT...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCGATGACACCAGCATCTaGATTCACCGTGCAGTTGAG +
Preference number: 5 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTDDTSI*IHRAVE
Trigger: CTCAACTGCACGGTGAATCAAGATGCTGGTGTCATC...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTGTGAGAAGGTGGGTCTaGACCACATGGAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: NIYVPVRLDGSLWVEILAVRRWV*TTWSLG
Trigger: GCCCAAGCTCCATGTGGTCAAGACCCACCTTCTCAC...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp TCAAGCCAAACTCTCATGGAGAGCCTGGGCCAGAGCAACTCTGCTTCCAGGGATATACTTCTATTGATGTaGGTGTTCCCCTTCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SSQTLMESLGQSNSASRDILLLM*VFPFLF
Trigger: AAACAAGAAGGGGAACACCAACATCAATAGAAGTAT...ATCCCTGGAAGCAGAGTTGCTCTGGCCCAGGCTCTCCATGAGAGTTTGGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp TGCAGCAGGGAACCGACGGGCGTTGCCCAGAAAATCAGAATAATAGCAGTGTTGAGAATAATAGCAGTGTaGCCGGTGACATTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: CSREPTGVAQKIRIIAVLRIIAV*PVTFQE
Trigger: CTCTTGAAATGTCACCGGCAACACTGCTATTATTCT...CAACACTGCTATTATTCTGATTTTCTGGGCAACGCCCGTCGGTTCCCTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp CAGGGAGGCATGCTTGGGCTCATTGTAAAGAACAATGATTTAATAATCAGAGCTAGATGGAGCTGGATCTaGCAGGCCCCTGTGGGTAGA +
Preference number: 5 (lower is better)
Translates to: QGGMLGLIVKNNDLIIRARWSWI*QAPVGR
Trigger: TCTACCCACAGGGGCCTGCAAGATCCAGCTCCATCT...AGCTCTGATTATTAAATCATTGTTCTTTACAATGAGCCCAAGCATGCCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp AACTCTCAGATTCCCAGGGTTTGTTATATAGGAGAGGATGACACTACATGCTGCTCAGGGTCCAGGTTCTaGACCAACAGGTGGTACTGT +
Preference number: 5 (lower is better)
Translates to: NSQIPRVCYIGEDDTTCCSGSRF*TNRWYC
Trigger: ACAGTACCACCTGTTGGTCAAGAACCTGGACCCTGA...GCAGCATGTAGTGTCATCCTCTCCTATATAACAAACCCTGGGAATCTGAGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS CCA 90 bp CTGGTAGAGGGGTGTTCAGGTAGTCATCCAATTTCTTTAGAGCCTTaGTTAGGCCTCTTTCAAGAGCAGCATTGTTCTGCTGCTTGGTAT +
Preference number: 5 (lower is better)
Translates to: LVEGCSGSHPISLEP*LGLFQEQHCSAAWY
Trigger: ATACCAAGCAGCAGAACAATGCTGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGGATGACTACCTGAACACCCCTCTACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000185206.12
ENST00000339561.12
ENST00000544153.3
ENST00000642250.1
ENST00000644324.1
ENST00000644878.1
ENST00000672327.1
CDS CCA 90 bp TATTCAAACTTCTTGCCAGTGGATACAGTCATAGGGTCTTCAGAGTaGAGTAGCTCATCTAGAATCCTGTCCCCTTCATCACACTGCCAG +
Preference number: 5 (lower is better)
Translates to: YSNFLPVDTVIGSSE*SSSSRILSPSSHCQ
Trigger: CTGGCAGTGTGATGAAGGGGACAGGATTCTAGATGAGCTACTCCACTCTGAAGACCCTATGACTGTATCCACTGGCAAGAAGTTTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484572.2
ENST00000486570.2
ENST00000487396.3
ENST00000643162.1
CDS CCA 90 bp GCAGAATACCCAGGGCACATACGCTTATGCAAGCACACACATAGCTaGTCCTTAAACCATTCAAACTACTCCTGGGACGTACAATGGAAA +
Preference number: 5 (lower is better)
Translates to: AEYPGHIRLCKHTHS*SLNHSNYSWDVQWK
Trigger: TTTCCATTGTACGTCCCAGGAGTAGTTTGAATGGTTTAAGGACCAGCTATGTGTGTGCTTGCATAAGCGTATGTGCCCTGGGTATTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486570.2
CDS-3UTR CAA 90 bp TGTGCTGCACATATGATAAGAAGGCCAGACAGGCTGAAGCATCTGGAGAAAGATAATATAACCCTTCCATaGAGATGCCCCTGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CAAHMIRRPDRLKHLEKDNITLP*RCPCPP
Trigger: AGGAGGACAGGGGCATCTCAATGGAAGGGTTATATT...ATCTTTCTCCAGATGCTTCAGCCTGTCTGGCCTTCTTATCATATGTGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp GAAAGGAAAAGAAGGCAAGAAGGAATACAATCCACTTCTGTTCTTCTAGGCATGTCGATGCCCGCTGTGTaGGATTCCCGGTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: ERKRRQEGIQSTSVLLGMSMPAV*DSRCFA
Trigger: TGCAAAACACCGGGAATCCAACACAGCGGGCATCGA...CATGCCTAGAAGAACAGAAGTGGATTGTATTCCTTCTTGCCTTCTTTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTTCGATGCCCGCTGTGTaGGATTCCCGGTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: NIYVPVRLDGSLWVEILASMPAV*DSRCFA
Trigger: TGCAAAACACCGGGAATCCAACACAGCGGGCATCGA...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp TGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGATCTTCCCCACAAGTGTaGGCGTCAATCTCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: CPENQNNSSVAGDISRARSSPQV*ASISSG
Trigger: ACCAGAGGAGATTGACGCCAACACTTGTGGGGAAGA...TCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGATTCTTGGCCACAATCTaGACCACATGGAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERFLATI*TTWSLG
Trigger: GCCCAAGCTCCATGTGGTCAAGATTGTGGCCAAGAA...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGGAAAAGGAGTTGGTGTaGCATGTTTCTAAAGCATCT +
Preference number: 5 (lower is better)
Translates to: PANTIEGGLLKVRACGKWEKELV*HVSKAS
Trigger: AGATGCTTTAGAAACATGCAACACCAACTCCTTTTC...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCTGGCCGGCCGAAAGGTGGACTGTGTCTATCATTTCTGCTAGATTCCTATTTTGGTTTGGCCTGTTaGTTTTTAAGGACTTTCCAG +
Preference number: 5 (lower is better)
Translates to: QAGRPKGGLCLSFLLDSYFGLAC*FLRTFQ
Trigger: CTGGAAAGTCCTTAAAAACAAACAGGCCAAACCAAA...ATAGGAATCTAGCAGAAATGATAGACACAGTCCACCTTTCGGCCGGCCAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTTGGGACACCTAAGGACCTCACCACACTGTTGCTGAGACATGATGTGCTGCACATCCCTTGGGAATCATaGTACTTAGTTTTAACCATG +
Preference number: 5 (lower is better)
Translates to: LGTPKDLTTLLLRHDVLHIPWES*YLVLTM
Trigger: CATGGTTAAAACTAAGTACAATGATTCCCAAGGGAT...GTGCAGCACATCATGTCTCAGCAACAGTGTGGTGAGGTCCTTAGGTGTCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACCTCCTGATCTTTGCATaGTATCACTCTGACACAGTG +
Preference number: 5 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDLLIFA*YHSDTV
Trigger: CACTGTGTCAGAGTGATACAATGCAAAGATCAGGAG...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp GAAAGGAAAAGAAGGCAAGAAGGAATACAATCCACTTCTGTTCTTCTAGGCATGAACTGGAGGCCTGACTaGGCTTCCCCTTCGCTCTTT +
Preference number: 5 (lower is better)
Translates to: ERKRRQEGIQSTSVLLGMNWRPD*ASPSLF
Trigger: AAAGAGCGAAGGGGAAGCCAAGTCAGGCCTCCAGTT...CATGCCTAGAAGAACAGAAGTGGATTGTATTCCTTCTTGCCTTCTTTTCCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTTGGATTCCCGGTGTTTaGCAGCCAGTTTGGGGTACT +
Preference number: 5 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSWIPGV*QPVWGT
Trigger: AGTACCCCAAACTGGCTGCAAAACACCGGGAATCCA...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAAATACAGGACCGGAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACCTTTCAAGAGCAGCATaGTTCTGCTGCTTGGTATTT +
Preference number: 5 (lower is better)
Translates to: QIQDRNSGLLIFALYHSDLSRAA*FCCLVF
Trigger: AAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAG...GTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTCCGGTCCTGTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATCATTACAGGCTACAGTaGAATCAGGCAGGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNHYRLQ*NQAGAA
Trigger: AGCTGCTCCTGCCTGATTCAACTGTAGCCTGTAATG...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGTTTTTCACCTGGCAGTaGAGTCAGATTGTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKFFTWQ*SQIVGK
Trigger: TTTTCCTACAATCTGACTCAACTGCCAGGTGAAAAA...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCAGCGAACACTATAGAAGGGGGATTGTTGAAGGTAAGGGCCTGTGGCAAATGGCTAGAAACAGCAATATaGATTTGGTTTGGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: PANTIEGGLLKVRACGKWLETAI*IWFGLF
Trigger: AAACAGGCCAAACCAAATCAATATTGCTGTTTCTAG...CCATTTGCCACAGGCCCTTACCTTCAACAATCCCCCTTCTATAGTGTTCGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGTGGGAAAACTCGCACTaGGTGTGGCCTTTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLWENSH*VWPFSD
Trigger: ATCAGAAAAAGGCCACACCAAGTGCGAGTTTTCCCA...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGTGTGAAGAGCTTCTGTaGTTTCATTTGATAAGGGCC +
Preference number: 5 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSCEELL*FHLIRA
Trigger: GGCCCTTATCAAATGAAACAACAGAAGCTCTTCACA...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GAAAGGAAAAGAAGGCAAGAAGGAATACAATCCACTTCTGTTCTTCTAGGCATGGCCAAGGGCTGGCCTTaGTTCTTTCATTGGCCATCT +
Preference number: 5 (lower is better)
Translates to: ERKRRQEGIQSTSVLLGMAKGWP*FFHWPS
Trigger: AGATGGCCAATGAAAGAACAAAGGCCAGCCCTTGGC...CATGCCTAGAAGAACAGAAGTGGATTGTATTCCTTCTTGCCTTCTTTTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATGCTCACCTTAGGAAGTaGCTGGAGGAAGTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYAHLRK*LEEVRR
Trigger: CCTTCTCACTTCCTCCAGCAACTTCCTAAGGTGAGC...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp AGTAAGTGCAATGATAGCAAGAAAGTGACATCACTTCTTGCAACCTCCACCTCTGGGAAGAAGTGCTCATaGACAGAGCTTAGGGGGATA +
Preference number: 5 (lower is better)
Translates to: SKCNDSKKVTSLLATSTSGKKCS*TELRGI
Trigger: TATCCCCCTAAGCTCTGTCAATGAGCACTTCTTCCC...AGAGGTGGAGGTTGCAAGAAGTGATGTCACTTTCTTGCTATCATTGCACTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS TCA 90 bp AACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTGACACAGTGTaGCTGAGCTGGAATTATATCATCCCTTTCAGTGGTACTTGTTCC +
Preference number: 5 (lower is better)
Translates to: NSGLLIFALYHSDTV*LSWNYIIPFSGTCS
Trigger: GGAACAAGTACCACTGAAAGGGATGATATAATTCCAGCTCAGTCACACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486570.2
ENST00000544153.3
CDS-3UTR CAA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGAGTTGCTGGTCCTGGGTaGATGAATATAACCCTTCCA +
Preference number: 5 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERVAGPG*MNITLP
Trigger: TGGAAGGGTTATATTCATCAACCCAGGACCAGCAAC...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp GAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGACATGAATGGATTCCCGGTGTTTaGCAGCCAGTTTGGGGTACT +
Preference number: 5 (lower is better)
Translates to: ENQNNSSVAGDISRARHEWIPGV*QPVWGT
Trigger: AGTACCCCAAACTGGCTGCAAAACACCGGGAATCCA...TTCATGTCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGGAAGGTATTTTGATATaGGCAGAAGAAGCTAGTGGC +
Preference number: 5 (lower is better)
Translates to: QALLISGTLIWSRSISGMEGILI*AEEASG
Trigger: GCCACTAGCTTCTTCTGCCAATATCAAAATACCTTC...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GATAAAGAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGTTTTCTCTGTGGCAATaGGCTATGATTCACAGATGT +
Preference number: 5 (lower is better)
Translates to: DKEKWIEDNGAVCSRSCSFSLWQ*AMIHRC
Trigger: ACATCTGTGAATCATAGCCAATTGCCACAGAGAAAA...CGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTCTTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CTGTGCTGTAAATTCGGGGAAGGATTTCTGAGTACAGCAGGATTTCACACTAATTGGGAAAACTCGCACTaGGTGTGGCCTTTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LCCKFGEGFLSTAGFHTNWENSH*VWPFSD
Trigger: ATCAGAAAAAGGCCACACCAAGTGCGAGTTTTCCCA...ATTAGTGTGAAATCCTGCTGTACTCAGAAATCCTTCCCCGAATTTACAGCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp GAGAAATGGATAGAAGACAATGGGGCTGTGTGCAGCAGGTCCTGTTCGCTTAAGAGACTGGAACACAAATaGGTAATTGGTTCAGATTCA +
Preference number: 5 (lower is better)
Translates to: EKWIEDNGAVCSRSCSLKRLEHK*VIGSDS
Trigger: TGAATCTGAACCAATTACCAATTTGTGTTCCAGTCT...CTTAAGCGAACAGGACCTGCTGCACACAGCCCCATTGTCTTCTATCCATTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp TGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGACCCCATTTCTTCTGCTaGCTTCTTCCTCTACTCCAT +
Preference number: 5 (lower is better)
Translates to: CPENQNNSSVAGDISRARPHFFC*LLPLLH
Trigger: ATGGAGTAGAGGAAGAAGCAAGCAGAAGAAATGGGG...TCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS GCA 90 bp CTGGAACCTCATACGTCCTCTCATTTTGGATTGTGTCATAGATGGTaGTGTAGTCTTCGTCATTCATGCTTATTGATCCGAGAGATCTGT +
Preference number: 5 (lower is better)
Translates to: LEPHTSSHFGLCHRW*CSLRHSCLLIREIC
Trigger: ACAGATCTCTCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATGACACAATCCAAAATGAGAGGACGTATGAGGTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS GCA 90 bp GTCCTTAAACCATTCAAACTACTCCTGGGACGTACAATGGAAATGTaGCTTGCTTTGTTTTCAACTGCTATGGTCTTCCTTACAAGCTCC +
Preference number: 5 (lower is better)
Translates to: VLKPFKLLLGRTMEM*LALFSTAMVFLTSS
Trigger: GGAGCTTGTAAGGAAGACCATAGCAGTTGAAAACAAAGCAAGGCACATTTCCATTGTACGTCCCAGGAGTAGTTTGAATGGTTTAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486570.2
CDS CCA 90 bp TGCAAGCACACACATAGCTGGTCCTTAAACCATTCAAACTACTCCTaGGACGTACAATGGAAATGTGCCTTGCTTTGTTTTCAACTGCTA +
Preference number: 5 (lower is better)
Translates to: CKHTHSWSLNHSNYS*DVQWKCALLCFQLL
Trigger: TAGCAGTTGAAAACAAAGCAAGGCACATTTCCATTGTACGTCCCAGGAGTAGTTTGAATGGTTTAAGGACCAGCTATGTGTGTGCTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486570.2
CDS-3UTR CAA 90 bp CTGTATACAACAACGATAATTGCGACTATTACACATATTAAGCCCCCACAATATTCGATGCCCGCTGTGTaGGATTCCCGGTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: LYTTTIIATITHIKPPQYSMPAV*DSRCFA
Trigger: TGCAAAACACCGGGAATCCAACACAGCGGGCATCGA...ATATTGTGGGGGCTTAATATGTGTAATAGTCGCAATTATCGTTGTTGTATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGCTTTCAAGAGCAGCATaGTTCTGCTGCTTGGTATTT +
Preference number: 5 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLLSRAA*FCCLVF
Trigger: AAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAG...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTCTTTCAAGAGCAGCATaGTTCTGCTGCTTGGTATTT +
Preference number: 5 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTLSRAA*FCCLVF
Trigger: AAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAG...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTAGAAGGTATTTTGATATaGGCAGAAGAAGCTAGTGGC +
Preference number: 5 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLEGILI*AEEASG
Trigger: GCCACTAGCTTCTTCTGCCAATATCAAAATACCTTC...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CAGGCCTTGCTGATTTCTGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACTGGGAAGACATTTTaGACCCATTCTTGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: QALLISGTLIWSRSISGMTGKTF*THSWVF
Trigger: AAAAACCCAAGAATGGGTCAAAAATGTCTTCCCAGT...CATGCCTGAAATAGATCTTGACCATATGAGAGTCCCAGAAATCAGCAAGGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTATCCAATCCGAGTCCTaGGAATTCTGCAGACTTCTC +
Preference number: 5 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSIQSES*EFCRLL
Trigger: GAGAAGTCTGCAGAATTCCAAGGACTCGGATTGGAT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp CCCCTTTCTGTGCCACCAAAATGCTTTCTGAGCGATTTGTATTCATTCAGGACCCAAGATAAAACTAGTTaGGGATCGTGTGGCCAAATA +
Preference number: 5 (lower is better)
Translates to: PLSVPPKCFLSDLYSFRTQDKTS*GSCGQI
Trigger: TATTTGGCCACACGATCCCAAACTAGTTTTATCTTG...GGTCCTGAATGAATACAAATCGCTCAGAAAGCATTTTGGTGGCACAGAAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp ATCGTGTGGCCAAATAAGCTGATGGACTCTGTTTCCGACATTTCAGCTCATTTGCTTCTGTTGTTTCATTaGATAAGGGCCTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: IVWPNKLMDSVSDISAHLLLLFH*IRAWKV
Trigger: GACTTTCCAGGCCCTTATCAAATGAAACAACAGAAG...CAAATGAGCTGAAATGTCGGAAACAGAGTCCATCAGCTTATTTGGCCACACGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AAGAAAGCTGGAGGAAATCCATGGAGGCTTCTTGTAGGAAGAACCATCAGAACTGAACATAAGCAACTGTaGTGGGCCTCATACTATATC +
Preference number: 5 (lower is better)
Translates to: KKAGGNPWRLLVGRTIRTEHKQL*WASYYI
Trigger: GATATAGTATGAGGCCCACAACAGTTGCTTATGTTC...AGTTCTGATGGTTCTTCCTACAAGAAGCCTCCATGGATTTCCTCCAGCTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS GCA 90 bp CATTTTGGATTGTGTCATAGATGGTGCTGTAGTCTTCGTCATTCATaGTTATTGATCCGAGAGATCTGTTTACAGGGAGACCTGAGTAGA +
Preference number: 5 (lower is better)
Translates to: HFGLCHRWCCSLRHS*LLIREICLQGDLSR
Trigger: TCTACTCAGGTCTCCCTGTAAACAGATCTCTCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATGACACAATCCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTACGTCATTCATGCTTATaGATCCGAGAGATCTGTTTA +
Preference number: 5 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLRHSCL*IREICL
Trigger: TAAACAGATCTCTCGGATCAATAAGCATGAATGACG...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS-3UTR CAA 90 bp TGCCCAGAAAATCAGAATAATAGCAGTGTTGCCGGTGACATTTCAAGAGCTAGACTTTCAAGAGCAGCATaGTTCTGCTGCTTGGTATTT +
Preference number: 5 (lower is better)
Translates to: CPENQNNSSVAGDISRARLSRAA*FCCLVF
Trigger: AAATACCAAGCAGCAGAACAATGCTGCTCTTGAAAG...TCTAGCTCTTGAAATGTCACCGGCAACACTGCTATTATTCTGATTTTCTGGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644878.1
CDS-3UTR CAA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATTTTCTCTGTGGCAATaGGCTATGATTCACAGATGT +
Preference number: 5 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLFSLWQ*AMIHRC
Trigger: ACATCTGTGAATCATAGCCAATTGCCACAGAGAAAA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp ATTCAACTCAGTCATTCTGAGTTTGACTCTTGCTTCTGCCTTCGTCTCCCACTATTTGGTTTGGCCTGTTaGTTTTTAAGGACTTTCCAG +
Preference number: 5 (lower is better)
Translates to: IQLSHSEFDSCFCLRLPLFGLAC*FLRTFQ
Trigger: CTGGAAAGTCCTTAAAAACAAACAGGCCAAACCAAA...TAGTGGGAGACGAAGGCAGAAGCAAGAGTCAAACTCAGAATGACTGAGTTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGACTTCTGTTGTTTCATTaGATAAGGGCCTGGAAAGTC +
Preference number: 5 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERLLLFH*IRAWKV
Trigger: GACTTTCCAGGCCCTTATCAAATGAAACAACAGAAG...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGATGTGAAGAGCTTCTGTaGTTTCATTTGATAAGGGCC +
Preference number: 5 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERCEELL*FHLIRA
Trigger: GGCCCTTATCAAATGAAACAACAGAAGCTCTTCACA...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp AGATCTGACGTTCGCAGGGACTTCCATGCTCATGTTCTGAATTTGCTCTTTCATGCCTTTGTTCTTTCATaGGCCATCTTCTTTTTGATC +
Preference number: 5 (lower is better)
Translates to: RSDVRRDFHAHVLNLLFHAFVLS*AIFFLI
Trigger: GATCAAAAAGAAGATGGCCAATGAAAGAACAAAGGC...ATGAAAGAGCAAATTCAGAACATGAGCATGGAAGTCCCTGCGAACGTCAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544153.3
CDS-3UTR CAA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTCTATATCTTAGGAAGTaGCTGGAGGAAGTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: NIYVPVRLDGSLWVEILALYLRK*LEEVRR
Trigger: CCTTCTCACTTCCTCCAGCAACTTCCTAAGATATAG...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATAGAAAGTGGTCCAGGTaGAAGTGGGAGATTGTTTTG +
Preference number: 5 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYRKWSR*KWEIVL
Trigger: CAAAACAATCTCCCACTTCAACCTGGACCACTTTCT...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS-3UTR CAA 90 bp TGGGACTCTCATATGGTCAAGATCTATTTCAGGCATGACCTATCTTATGACAGTACAGTTCTAAGATGCTaGGTATTGTCTGTCTGTGGA +
Preference number: 5 (lower is better)
Translates to: WDSHMVKIYFRHDLSYDSTVLRC*VLSVCG
Trigger: TCCACAGACAGACAATACCAAGCATCTTAGAACTGT...ACTGTCATAAGATAGGTCATGCCTGAAATAGATCTTGACCATATGAGAGTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS-3UTR CAA 90 bp TGTAAGGTTAGCAGTTACATGATGCCACCAGTCCAAGACTTAGATCATGAGAGACTAGAAACAGCAATATaGATTTGGTTTGGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: CKVSSYMMPPVQDLDHERLETAI*IWFGLF
Trigger: AAACAGGCCAAACCAAATCAATATTGCTGTTTCTAG...TCTCTCATGATCTAAGTCTTGGACTGGTGGCATCATGTAACTGCTAACCTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000185206.12
ENST00000339561.12
CDS TCA 90 bp TGCTGTCACACGGGCTGTGTGACAATGAAACATCTGGTCAAAAAGTaGGAAATCCATTTGGATTTTTCCTTATTGCCAGATAAAGAAACT +
Preference number: 5 (lower is better)
Translates to: CCHTGCVTMKHLVKK*EIHLDFSLLPDKET
Trigger: AGTTTCTTTATCTGGCAATAAGGAAAAATCCAAATGGATTTCTCACTTTTTGACCAGATGTTTCATTGTCACACAGCCCGTGTGACAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000486570.2
CDS CCA 90 bp AGGGGTATAAATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTaGGTTGAAATCCTAGCTCTTATTGCTTATGAACATAAGCAACTG +
Preference number: 5 (lower is better)
Translates to: RGINIYVPVRLDGSL*VEILALIAYEHKQL
Trigger: CAGTTGCTTATGTTCATAAGCAATAAGAGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATTTATACCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp AATATATATGTGCCTGTGAGACTTGATGGCAGTCTTTGGGTTGAAATCCTAGCTAGAACCATCAGAACTTaGAAGCAGGGGTATAAATAT +
Preference number: 5 (lower is better)
Translates to: NIYVPVRLDGSLWVEILARTIRT*KQGYKY
Trigger: ATATTTATACCCCTGCTTCAAAGTTCTGATGGTTCT...AGCTAGGATTTCAACCCAAAGACTGCCATCAAGTCTCACAGGCACATATATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS-3UTR CAA 90 bp GGAAGAGGCCTTTGGAGTGATATGACTGTATACAACAACGATAATTGCGACTATCCTCCACCTCTTCATTaGATAGATGAGGAAAATAAT +
Preference number: 5 (lower is better)
Translates to: GRGLWSDMTVYNNDNCDYPPPLH*IDEENN
Trigger: ATTATTTTCCTCATCTATCAAATGAAGAGGTGGAGG...ATAGTCGCAATTATCGTTGTTGTATACAGTCATATCACTCCAAAGGCCTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS GCA 90 bp TCCAATTTCTTTAGAGCCTTGGTTAGGCCTCTTTCAAGAGCTTATTaGCAGATAAAGAAACTGAATGTAAAGTCCATTTTACAGATGCAG +
Preference number: 5 (lower is better)
Translates to: SNFFRALVRPLSRAY*QIKKLNVKSILQMQ
Trigger: CTGCATCTGTAAAATGGACTTTACATTCAGTTTCTTTATCTGGCAATAAGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645626.1
CDS GCA 72 bp TGCAGCACCTGGGCCAGCACTCTGCGCTCCTGCCGCTaGCCAGCGGGGCTCCTCTTCAGGGCGGTGTTTAAT +
Preference number: 6 (lower is better)
Translates to: CSTWASTLRSCR*PAGLLFRAVFN
Trigger: ATTAAACACCGCCCTGAAGAGGAGCCCCGCTGGGCAGCGGCAGGAGCGCAGAGTGCTGGCCCAGGTGCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339561.12
ENST00000544153.3
ENST00000642250.1
ENST00000672327.1
CDS GCA 72 bp CCGACTTCCCCTCCCCCAAGTCCTGGCGACTGTTTCTaGTCAGCCCTGGAGGCTACTCTCCCGCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PTSPPPSPGDCF*SALEATLPQPQ
Trigger: CTGAGGCTGCGGGAGAGTAGCCTCCAGGGCTGAGCAGAAACAGTCGCCAGGACTTGGGGGAGGGGAAGTCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464137.1
CDS GCA 72 bp CCCGAGCAGCGGGGTCTGAGAGATCAGTGTCCCAGATaGTCACATGAAAAGGAGCGAAGCCGGGAGGAGGCG +
Preference number: 6 (lower is better)
Translates to: PEQRGLRDQCPR*SHEKERSREEA
Trigger: CGCCTCCTCCCGGCTTCGCTCCTTTTCATGTGAGCATCTGGGACACTGATCTCTCAGACCCCGCTGCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339561.12
ENST00000544153.3
CDS CCA 72 bp CTCCCCCAAGTCCTGGCGACTGTTTCTGCTCAGCCCTaGAGGCTACTCTCCCGCAGCCTCAGGTTTCCCTAC +
Preference number: 6 (lower is better)
Translates to: LPQVLATVSAQP*RLLSRSLRFPY
Trigger: GTAGGGAAACCTGAGGCTGCGGGAGAGTAGCCTCCAGGGCTGAGCAGAAACAGTCGCCAGGACTTGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464137.1
CDS GCA 72 bp GTCAGGAAGGGCGGGTGCGTGCCGGGGGCTAGGTTGTaGAGGTCAGCTGGCTTTCTTTTCAGATCCACAGTG +
Preference number: 6 (lower is better)
Translates to: VRKGGCVPGARL*RSAGFLFRSTV
Trigger: CACTGTGGATCTGAAAAGAAAGCCAGCTGACCTGCACAACCTAGCCCCCGGCACGCACCCGCCCTTCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000185206.12
ENST00000339561.12
ENST00000544153.3
ENST00000642250.1
ENST00000644324.1
ENST00000644878.1
ENST00000672327.1
CDS CCA 72 bp CTCATCCACACAGGTGACCTGGGCCTAAGATGGAGCTaGATCTTGCAGGCCCCTGTGGGTAGAGCTCTCTTA +
Preference number: 6 (lower is better)
Translates to: LIHTGDLGLRWS*ILQAPVGRALL
Trigger: TAAGAGAGCTCTACCCACAGGGGCCTGCAAGATCCAGCTCCATCTTAGGCCCAGGTCACCTGTGTGGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS TCA 72 bp GGGTCCAGGTTCTTGACCAACAGGTGGTACTGTCCTTaGCTCATCCACACAGGTGACCTGGGCCTAAGATGG +
Preference number: 6 (lower is better)
Translates to: GSRFLTNRWYCP*LIHTGDLGLRW
Trigger: CCATCTTAGGCCCAGGTCACCTGTGTGGATGAGTCAAGGACAGTACCACCTGTTGGTCAAGAACCTGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672327.1
CDS GCA 72 bp GGTCCTGGGTTGATGAATATAACCCTTCCATTGAGATaGCCCTGTCCTCCTGGGGCTCACCTGGATGAGCCT +
Preference number: 6 (lower is better)
Translates to: GPGLMNITLPLR*PCPPGAHLDEP
Trigger: AGGCTCATCCAGGTGAGCCCCAGGAGGACAGGGGCATCTCAATGGAAGGGTTATATTCATCAACCCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS GCA 72 bp CTGTCCCCTTCATCACACTGCCAGCTCCCCACACACTaGAGAATACCCAGGGCACATACGCTTATGCAAGCA +
Preference number: 6 (lower is better)
Translates to: LSPSSHCQLPTH*RIPRAHTLMQA
Trigger: TGCTTGCATAAGCGTATGTGCCCTGGGTATTCTGCAGTGTGTGGGGAGCTGGCAGTGTGATGAAGGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486570.2
CDS TCA 72 bp AGGTTTCCCTACTTCTGCAGCGTCGGCACCAAGGGCTaGTCAAATGTTTCTTTCTCCTTACACCGGCGGACC +
Preference number: 6 (lower is better)
Translates to: RFPYFCSVGTKG*SNVSFSLHRRT
Trigger: GGTCCGCCGGTGTAAGGAGAAAGAAACATTTGATCAGCCCTTGGTGCCGACGCTGCAGAAGTAGGGAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464137.1
CDS TCA 72 bp GGTAGAGAAGGCCTTACTGTGCTGAATGGTGAAGCTTaGAGGAGAAGGCAGATCTTCCTTCATCACACTCCC +
Preference number: 6 (lower is better)
Translates to: GREGLTVLNGEA*RRRQIFLHHTP
Trigger: GGGAGTGTGATGAAGGAAGATCTGCCTTCTCCTTCAAGCTTCACCATTCAGCACAGTAAGGCCTTCTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS CAA 90 bp CGGGATATCATAGTTGCGGTATTTCTTGGCCACAATCTTAGGAAGTaGCTGGAGGAAGTGAGAAGGTGGGTCTTGACCACATGGAGCTTG +
Preference number: 6 (lower is better)
Translates to: RDIIVAVFLGHNLRK*LEEVRRWVLTTWSL
Trigger: CAAGCTCCATGTGGTCAAGACCCACCTTCTCACTTCCTCCAGCAACTTCCTAAGATTGTGGCCAAGAAATACCGCAACTATGATATCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484572.2
CDS TCA 72 bp CAGGAATACTTGGTGGTAGAGAAGGCCTTACTGTGCTaGATGGTGAAGCTTGAAGGAGAAGGCAGATCTTCC +
Preference number: 6 (lower is better)
Translates to: QEYLVVEKALLC*MVKLEGEGRSS
Trigger: GGAAGATCTGCCTTCTCCTTCAAGCTTCACCATTCAGCACAGTAAGGCCTTCTCTACCACCAAGTATTCCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS GCA 72 bp CCACACACTGCAGAATACCCAGGGCACATACGCTTATaGAAGCACACACATAGCTGGTCCTTAAACCATTCA +
Preference number: 6 (lower is better)
Translates to: PHTAEYPGHIRL*KHTHSWSLNHS
Trigger: TGAATGGTTTAAGGACCAGCTATGTGTGTGCTTGCATAAGCGTATGTGCCCTGGGTATTCTGCAGTGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486570.2
CDS CAA 72 bp AGATGCAGAGCCAGAGGCTCAGAAAGAATAAGCCTCTaGGGTAAAGTTGTGCAGCTAGAAGTGCTGGGATTC +
Preference number: 6 (lower is better)
Translates to: RCRARGSERISL*GKVVQLEVLGF
Trigger: GAATCCCAGCACTTCTAGCTGCACAACTTTACCCAAGAGGCTTATTCTTTCTGAGCCTCTGGCTCTGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484572.2
ENST00000486570.2
ENST00000487396.3
ENST00000643162.1
ENST00000645626.1
CDS CCA 72 bp TTCTTGCCAGTGGATACAGTCATAGGGTCTTCAGAGTaGAGTAGCTCATCTAGAATCCTGTCCCCTTCATCA +
Preference number: 6 (lower is better)
Translates to: FLPVDTVIGSSE*SSSSRILSPSS
Trigger: TGATGAAGGGGACAGGATTCTAGATGAGCTACTCCACTCTGAAGACCCTATGACTGTATCCACTGGCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484572.2
ENST00000486570.2
ENST00000487396.3
ENST00000643162.1
CDS TCA 72 bp GAACTCGGGTCTCCTGATCTTTGCATTGTATCACTCTaGCACAGTGTGACTGAGCTGGAATTATATCATCCC +
Preference number: 6 (lower is better)
Translates to: ELGSPDLCIVSL*HSVTELELYHP
Trigger: GGGATGATATAATTCCAGCTCAGTCACACTGTGTCAGAGTGATACAATGCAAAGATCAGGAGACCCGAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486570.2
ENST00000544153.3
CDS GCA 72 bp ACCTCCTCTTGGCCTTTGTTGGTTTGCCGTGCTTTATaGATCCCTGGGAGTAGCTATAAAGCCTTTCTTATT +
Preference number: 6 (lower is better)
Translates to: TSSWPLLVCRAL*IPGSSYKAFLI
Trigger: AATAAGAAAGGCTTTATAGCTACTCCCAGGGATGCATAAAGCACGGCAAACCAACAAAGGCCAAGAGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476852.1
CDS CCA 72 bp GGGTGTTCAGGTAGTCATCCAATTTCTTTAGAGCCTTaGTTAGGCCTCTTTCAAGAGCAGCATTGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: GCSGSHPISLEP*LGLFQEQHCSA
Trigger: AGCAGAACAATGCTGCTCTTGAAAGAGGCCTAACCAAGGCTCTAAAGAAATTGGATGACTACCTGAACACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000185206.12
ENST00000339561.12
ENST00000544153.3
ENST00000642250.1
ENST00000644324.1
ENST00000644878.1
ENST00000672327.1
CDS CAA 72 bp CATAGATGGTGCTGTAGTCTTCGTCATTCATGCTTATaGATCCGAGAGATCTGTTTACAGGGAGACCTGAGT +
Preference number: 6 (lower is better)
Translates to: HRWCCSLRHSCL*IREICLQGDLS
Trigger: ACTCAGGTCTCCCTGTAAACAGATCTCTCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS CAA 90 bp GGATTGTGTCATAGATGGTGCTGTAGTCTTCGTCATTCATGCTTATaGATCCGAGAGATCTGTTTACAGGGAGACCTGAGTAGATCTGAA +
Preference number: 6 (lower is better)
Translates to: GLCHRWCCSLRHSCL*IREICLQGDLSRSE
Trigger: TTCAGATCTACTCAGGTCTCCCTGTAAACAGATCTCTCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATGACACAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS CAA 90 bp CCCTTCATCACACTGCCAGCTCCCCACACACTGCAGAATACCTTATaGCCAGATAAAGAAACTGAATGTAAAGTCCATTTTACAGATGCA +
Preference number: 6 (lower is better)
Translates to: PFITLPAPHTLQNTL*PDKETECKVHFTDA
Trigger: TGCATCTGTAAAATGGACTTTACATTCAGTTTCTTTATCTGGCAATAAGGTATTCTGCAGTGTGTGGGGAGCTGGCAGTGTGATGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487396.3
ENST00000643162.1
CDS TCA 72 bp CTCCTGATCTTTGCATTGTATCACTCTGACACAGTGTaGCTGAGCTGGAATTATATCATCCCTTTCAGTGGT +
Preference number: 6 (lower is better)
Translates to: LLIFALYHSDTV*LSWNYIIPFSG
Trigger: ACCACTGAAAGGGATGATATAATTCCAGCTCAGTCACACTGTGTCAGAGTGATACAATGCAAAGATCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000486570.2
ENST00000544153.3
CDS GCA 72 bp TTGTGTCATAGATGGTGCTGTAGTCTTCGTCATTCATaGTTATTGATCCGAGAGATCTGTTTACAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: LCHRWCCSLRHS*LLIREICLQGD
Trigger: GTCTCCCTGTAAACAGATCTCTCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATGACACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS GCA 72 bp CAAACTACTCCTGGGACGTACAATGGAAATGTGCCTTaGTTTGTTTTCAACTGCTATGGTCTTCCTTACAAG +
Preference number: 6 (lower is better)
Translates to: QTTPGTYNGNVP*FVFNCYGLPYK
Trigger: CTTGTAAGGAAGACCATAGCAGTTGAAAACAAAGCAAGGCACATTTCCATTGTACGTCCCAGGAGTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486570.2
CDS GCA 72 bp CATACGTCCTCTCATTTTGGATTGTGTCATAGATGGTaGTGTAGTCTTCGTCATTCATGCTTATTGATCCGA +
Preference number: 6 (lower is better)
Translates to: HTSSHFGLCHRW*CSLRHSCLLIR
Trigger: TCGGATCAATAAGCATGAATGACGAAGACTACAGCACCATCTATGACACAATCCAAAATGAGAGGACGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000185206.12
CDS CCA 72 bp ACACATAGCTGGTCCTTAAACCATTCAAACTACTCCTaGGACGTACAATGGAAATGTGCCTTGCTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: THSWSLNHSNYS*DVQWKCALLCF
Trigger: AAAACAAAGCAAGGCACATTTCCATTGTACGTCCCAGGAGTAGTTTGAATGGTTTAAGGACCAGCTATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486570.2
CDS CAA 72 bp ATCCTAGCTCTTATTGCTTATGAACATAAGCAACTGTaGTGGGCCTCATACTATATCTTAGGAAGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: ILALIAYEHKQL*WASYYILGSCW
Trigger: CCAGCAACTTCCTAAGATATAGTATGAGGCCCACAACAGTTGCTTATGTTCATAAGCAATAAGAGCTAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642250.1
CDS CAA 72 bp ATCCTAGCTCTTATTGCTTATGAACATAAGCAACTGTaGTGGGCCTCATACTATATCTTCATGAAAGATAGC +
Preference number: 6 (lower is better)
Translates to: ILALIAYEHKQL*WASYYIFMKDS
Trigger: GCTATCTTTCATGAAGATATAGTATGAGGCCCACAACAGTTGCTTATGTTCATAAGCAATAAGAGCTAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645626.1