Pregenerated sensors for CLIC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000213719Ensembl transcript IDs: ENST00000375780.6, ENST00000375784.7, ENST00000383405.6, ENST00000400052.7, ENST00000418285.6, ENST00000420458.5, ENST00000422167.6, ENST00000425464.6, ENST00000431921.5, ENST00000438750.5, ENST00000442045.5, ENST00000447369.5, ENST00000456863.6, ENST00000457485.6
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCAGGGCTGTCCCTTCAGCACAACACAAGCTCAATCAGACCTACTTaGACCCAAACTAGGCCTCCCCACCAGCCCAACGCACCCCACACC | + |
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Preference number: 5 (lower is better) Translates to: PGLSLQHNTSSIRPT*TQTRPPHQPNAPHT Trigger: GGTGTGGGGTGCGTTGGGCTGGTGGGGAGGCCTAGTTTGGGTGCAAGTAGGTCTGATTGAGCTTGTGTTGTGCTGAAGGGACAGCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000375784.7 ENST00000400052.7 ENST00000418285.6 ENST00000422167.6 ENST00000425464.6 ENST00000456863.6 ENST00000457485.6 |
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| CDS CCA 90 bp | GCATTTCTTCCAGACTCCAATCCAAATTCTGGGTTGCTGGGACTGTaGTCTGAGAGAAGAACTCGGAAGTGGAAGGCTGGGACTGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: AFLPDSNPNSGLLGL*SERRTRKWKAGTAD Trigger: ATCTGCAGTCCCAGCCTTCCACTTCCGAGTTCTTCTCTCAGACCACAGTCCCAGCAACCCAGAATTTGGATTGGAGTCTGGAAGAAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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| CDS CCA 90 bp | GGGAACTGGGAGGGGAGCTTGGGCACACCCGTGAAGATTCAGGGATaGGGACTTCAAATGGAAAGGTGGTCGTTTAATCATTCTGCATTT | + |
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Preference number: 5 (lower is better) Translates to: GNWEGSLGTPVKIQG*GLQMERWSFNHSAF Trigger: AAATGCAGAATGATTAAACGACCACCTTTCCATTTGAAGTCCCCATCCCTGAATCTTCACGGGTGTGCCCAAGCTCCCCTCCCAGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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| CDS CCA 90 bp | GGCACACCCGTGAAGATTCAGGGATGGGGACTTCAAATGGAAAGGTaGTCGTTTAATCATTCTGCATTTCTTCCAGACTCCAATCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GTPVKIQGWGLQMER*SFNHSAFLPDSNPN Trigger: ATTTGGATTGGAGTCTGGAAGAAATGCAGAATGATTAAACGACCACCTTTCCATTTGAAGTCCCCATCCCTGAATCTTCACGGGTGTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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| CDS GCA 72 bp | GTCTACTGTCTCCGGGCCCAGCTCAGCACTAGGACTTaGAGTCCTTGTGGCCTACACTTGGGATTGGGCATA | + |
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Preference number: 6 (lower is better) Translates to: VYCLRAQLSTRT*SPCGLHLGLGI Trigger: TATGCCCAATCCCAAGTGTAGGCCACAAGGACTGCAAGTCCTAGTGCTGAGCTGGGCCCGGAGACAGTAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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| CDS TCA 72 bp | CTCCAATCCAAATTCTGGGTTGCTGGGACTGTGGTCTaGGAGAAGAACTCGGAAGTGGAAGGCTGGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: LQSKFWVAGTVV*EKNSEVEGWDC Trigger: GCAGTCCCAGCCTTCCACTTCCGAGTTCTTCTCTCAGACCACAGTCCCAGCAACCCAGAATTTGGATTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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| CDS CCA 72 bp | CCAGACTCCAATCCAAATTCTGGGTTGCTGGGACTGTaGTCTGAGAGAAGAACTCGGAAGTGGAAGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PDSNPNSGLLGL*SERRTRKWKAG Trigger: CCCAGCCTTCCACTTCCGAGTTCTTCTCTCAGACCACAGTCCCAGCAACCCAGAATTTGGATTGGAGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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| CDS CAA 72 bp | ACTAGGACTTGCAGTCCTTGTGGCCTACACTTGGGATaGGGCATAGGAAATAGAGTTAGGGGCCGGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: TRTCSPCGLHLG*GIGNRVRGRVR Trigger: CCTCACCCGGCCCCTAACTCTATTTCCTATGCCCAATCCCAAGTGTAGGCCACAAGGACTGCAAGTCCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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| CDS CCA 72 bp | GAGGGGAGCTTGGGCACACCCGTGAAGATTCAGGGATaGGGACTTCAAATGGAAAGGTGGTCGTTTAATCAT | + |
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Preference number: 6 (lower is better) Translates to: EGSLGTPVKIQG*GLQMERWSFNH Trigger: ATGATTAAACGACCACCTTTCCATTTGAAGTCCCCATCCCTGAATCTTCACGGGTGTGCCCAAGCTCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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| CDS CCA 72 bp | CATTTCTTCCAGACTCCAATCCAAATTCTGGGTTGCTaGGACTGTGGTCTGAGAGAAGAACTCGGAAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HFFQTPIQILGC*DCGLREELGSG Trigger: TCCACTTCCGAGTTCTTCTCTCAGACCACAGTCCCAGCAACCCAGAATTTGGATTGGAGTCTGGAAGAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000375780.6 ENST00000383405.6 ENST00000420458.5 ENST00000431921.5 ENST00000438750.5 ENST00000442045.5 ENST00000447369.5 |
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