RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLASP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000074054

Ensembl transcript IDs: ENST00000263710.8, ENST00000397587.7, ENST00000409078.8, ENST00000418989.5, ENST00000430234.5, ENST00000449975.1, ENST00000452274.6, ENST00000455322.6, ENST00000463621.3, ENST00000472776.1, ENST00000474065.5, ENST00000480007.1, ENST00000485112.1, ENST00000491646.1, ENST00000541377.5

Found 1533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTGCGTGCCCCGAGGACCGGCTGCACCCTGCCCAGACCCTGGCTaGAGGGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCC +
Preference number: 1 (lower is better)
Translates to: SCVPRGPAAPCPDPG*RGGSSLEEAGSQPA
Trigger: GGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCCCTGCAGCCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGCACGCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp CAGGGTCTAGGGGGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTC +
Preference number: 1 (lower is better)
Translates to: QGLGGDGGLGALPVR*WRHASLLGAAAAVF
Trigger: GAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGACCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 90 bp GGGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAGATTGAGGCC +
Preference number: 1 (lower is better)
Translates to: GRRWARRPPSEVVAA*ESPRRGGSSFQIEA
Trigger: GGCCTCAATCTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp GGTCTAGGGGGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAGA +
Preference number: 1 (lower is better)
Translates to: GLGGDGGLGALPVRW*RHASLLGAAAAVFR
Trigger: TCTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp GGCCCGTGGCATCGCCGCAGGTCCGGGAAGCACACACAGTGTACTTaGAGGAAGCTGCGTGCCCCGAGGACCGGCTGCACCCTGCCCAGA +
Preference number: 1 (lower is better)
Translates to: GPWHRRRSGKHTQCT*RKLRAPRTGCTLPR
Trigger: TCTGGGCAGGGTGCAGCCGGTCCTCGGGGCACGCAGCTTCCTTCAAGTACACTGTGTGTGCTTCCCGGACCTGCGGCGATGCCACGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 90 bp TGTCGGTGGAGTCGATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTGAAAGCCAGGGCAGTCGGCCTCCAG +
Preference number: 1 (lower is better)
Translates to: CRWSRLGRAGRRLSG*TPNSTLKARAVGLQ
Trigger: CTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGACTCCACCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR TCA 90 bp GGCGGCATGCGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGACGTGATTGTATCTCTAAGTCAGGAG +
Preference number: 1 (lower is better)
Translates to: GGMRVSSARRQQFSD*GQETCDVIVSLSQE
Trigger: CTCCTGACTTAGAGATACAATCACGTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp AGCTCTGGGGTAGGGACCTTGTCGGTGGAGTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAGC +
Preference number: 1 (lower is better)
Translates to: SSGVGTLSVESIRES*KETVRVHSQFYAES
Trigger: GCTTTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGACTCCACCGACAAGGTCCCTACCCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR TCA 90 bp CTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGT +
Preference number: 1 (lower is better)
Translates to: LVLTGQPMKGVGKGL*EAPPIASRSTQETG
Trigger: ACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
3UTR TCA 90 bp GGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAA +
Preference number: 1 (lower is better)
Translates to: GELEGDCQGALPILR*KPGQSASSLDMTSK
Trigger: TTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR CCA 90 bp CAGGGCAGAGGGGTCTGTGGAAATGATGTTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTC +
Preference number: 1 (lower is better)
Translates to: QGRGVCGNDVKNHVL*HPASAFSPSSCSGL
Trigger: GAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCCTCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 90 bp AGGGTCAGGGCAGAGGGGTCTGTGGAAATGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTG +
Preference number: 1 (lower is better)
Translates to: RVRAEGSVEMMLRIT*SGTQPLLSVLAVAV
Trigger: CACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCCTCTGCCCTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp GGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCCCATGACAACAGTGTTCCCAAGGAT +
Preference number: 1 (lower is better)
Translates to: GNKLVLNLNHRVAQR*GSWQSPHDNSVPKD
Trigger: ATCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp CACACACACACACACACACACACACACACACACACGTCAGCACCCTaGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGCCC +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHTSAP*LYCSYALWGLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp GGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTaGGGTACCTTCTGGGAGTCAAAGAGCTCAAGGAGAAAGGTCTTT +
Preference number: 1 (lower is better)
Translates to: GRPAMFEILSKYTGD*GTFWESKSSRRKVF
Trigger: AAAGACCTTTCTCCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp CAATTCTACGCTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCGTTTGTTAAAAGGCCATCTTCAGAC +
Preference number: 1 (lower is better)
Translates to: QFYAESQGSRPPVWI*QAKFPAFVKRPSSD
Trigger: GTCTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR CCA 90 bp CACACACACACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCCATGTTTCCAAATCAACATCAGTCT +
Preference number: 1 (lower is better)
Translates to: HTHTSAPWLYCSYAL*GLHFQPMFPNQHQS
Trigger: AGACTGATGTTGATTTGGAAACATGGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp ATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGGAGAAAGGTCTTTCTAACTGCATTA +
Preference number: 1 (lower is better)
Translates to: MFEILSKYTGDWGTF*ESKSSRRKVFLTAL
Trigger: TAATGCAGTTAGAAAGACCTTTCTCCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 90 bp TGGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTaGACTGCAATAGCAAATACGTTATTAGAATTAATCTCAAAAGAA +
Preference number: 1 (lower is better)
Translates to: WHPASAFSPSSCSGL*TAIANTLLELISKE
Trigger: TTCTTTTGAGATTAATTCTAATAACGTATTTGCTATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp TCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTaGGAAGTCAGAACTAAGATGGTAAAGATGCCATTTACCAGATTA +
Preference number: 1 (lower is better)
Translates to: SSLSRLFLALNPTLN*EVRTKMVKMPFTRL
Trigger: TAATCTGGTAAATGGCATCTTTACCATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp CAGCGTTTGTTAAAAGGCCATCTTCAGACTGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATA +
Preference number: 1 (lower is better)
Translates to: QRLLKGHLQTVLAKT*FPFLVGLRTQLKDI
Trigger: TATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGATGGCCTTTTAACAAACGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLEVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSKNHVL*HPASAF
Trigger: GAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: GRQQLGGSRESARPAPQWKNHVL*HPASAF
Trigger: GAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAGGCCAAGAGACCTGTaGCGTGATTGTATCTCTAAG +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLRPRDL*RDCISK
Trigger: CTTAGAGATACAATCACGTCACAGGTCTCTTGGCCT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLCSYAL*GLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 2 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 2 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAATCCCACATTAAACTaGGAAGTCAGAACTAAGATG +
Preference number: 2 (lower is better)
Translates to: GRQQLGGSRESARPAPQWNPTLN*EVRTKM
Trigger: CATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAATCCCACATTAAACTaGGAAGTCAGAACTAAGATG +
Preference number: 2 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSNPTLN*EVRTKM
Trigger: CATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 2 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 2 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCTAATCCTGTTTTTCTaGAATCTGCTACACCTCATA +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLLILFF*NLLHLI
Trigger: TATGAGGTGTAGCAGATTGCAGAAAAACAGGATTAG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 2 (lower is better)
Translates to: VDREAETGLGALLFCVLFSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: VDREAETGLGALLFCVLFLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 2 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIRRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 2 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 2 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 2 (lower is better)
Translates to: VDREAETGLGALLFCVLFRRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 2 (lower is better)
Translates to: LIVINICGPPCTDWAADEVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTLAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 2 (lower is better)
Translates to: VDREAETGLGALLFCVLFIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: IVISSLSRLFLALNPTLNRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 2 (lower is better)
Translates to: DVIVSLSQETEDWASDIQPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 2 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 2 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTTTTGTATGAAGACTaGAATACAGGCCTTGCTTCC +
Preference number: 2 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRVLYED*NTGLAS
Trigger: GGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 2 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACAGTGGGCTCTGCACTaGAATAGCAAATACGTTATT +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVQWALH*NSKYVI
Trigger: AATAACGTATTTGCTATTGCAGTGCAGAGCCCACTG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 2 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: IRESWKETVRVHSQFYAEVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: TKMVKMPFTRLTETMLELLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 2 (lower is better)
Translates to: IRESWKETVRVHSQFYAESSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR CCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CAA 90 bp AGATTAACTGAGACCATGTTAGAACTGAACGGCTTAGGCAGAACTTaGAGGGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTA +
Preference number: 2 (lower is better)
Translates to: RLTETMLELNGLGRT*RGGNKLVLNLNHRV
Trigger: TACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCCGTTCAGTTCTAACATGGTCTCAGTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGTTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: TKMVKMPFTRLTETMLELLAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: TKMVKMPFTRLTETMLELSIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGTTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 2 (lower is better)
Translates to: TKMVKMPFTRLTETMLELFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACCTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: IVISSLSRLFLALNPTLNLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATTCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 2 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYSSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR CCA 72 bp GGGGGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTCCTCGGCGCGGCGGCA +
Preference number: 3 (lower is better)
Translates to: GGDGGLGALPVR*WRHASLLGAAA
Trigger: TGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp GGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTCGGCGCGGCGGCAGCA +
Preference number: 3 (lower is better)
Translates to: GDGGLGALPVRW*RHASLLGAAAA
Trigger: TGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp AGGCAGCTGCAGCTGTCAGGGTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGTGAGGTGGTGGCGGCA +
Preference number: 3 (lower is better)
Translates to: RQLQLSGSRGRR*ARRPPSEVVAA
Trigger: TGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGACCCTGACAGCTGCAGCTGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 72 bp TGGGCTCGGCGCCCTCCCAGTGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAG +
Preference number: 3 (lower is better)
Translates to: WARRPPSEVVAA*ESPRRGGSSFQ
Trigger: CTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGTGTTCTGTTTTTCATaGGAACAGGGGCCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: GRQQLGGSRESARPAPQWVFCFS*EQGPCR
Trigger: CCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACAC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp GGTAAGCTAGTGAGGCGCATAGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGGAAGCACACACAGTGT +
Preference number: 3 (lower is better)
Translates to: GKLVRRIEKAGP*HRRRSGKHTQC
Trigger: ACACTGTGTGTGCTTCCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTCTATGCGCCTCACTAGCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 3 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCTCTCTAGGCTTTTCTaGGCTCTTAATCCCACATTA +
Preference number: 3 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSLSRLF*ALNPTL
Trigger: TAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTTCTTGCCAAGACTaGATTCCCATTTTTAGTAGG +
Preference number: 3 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSCSCQD*IPIFSR
Trigger: CCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 3 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 72 bp GAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATG +
Preference number: 3 (lower is better)
Translates to: EGDCQGALPILR*KPGQSASSLDM
Trigger: CATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR TCA 72 bp CGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGACGTGATTGTATCTCTA +
Preference number: 3 (lower is better)
Translates to: RVSSARRQQFSD*GQETCDVIVSL
Trigger: TAGAGATACAATCACGTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp GTAGGGACCTTGTCGGTGGAGTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTGCACTCCCAATTCTAC +
Preference number: 3 (lower is better)
Translates to: VGTLSVESIRES*KETVRVHSQFY
Trigger: GTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGACTCCACCGACAAGGTCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR CAA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: INICGPPCTDWAADEGGGERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR TCA 72 bp TTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCCCATGACAACAGTGTT +
Preference number: 3 (lower is better)
Translates to: LVLNLNHRVAQR*GSWQSPHDNSV
Trigger: AACACTGTTGTCATGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 72 bp CTCTGGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCAATAGCAAATACGTTA +
Preference number: 3 (lower is better)
Translates to: LWHPASAFSPSS*SGLCTAIANTL
Trigger: TAACGTATTTGCTATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 72 bp GCAGAGGGGTCTGTGGAAATGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTGCTTTCAGTCCTAGCA +
Preference number: 3 (lower is better)
Translates to: AEGSVEMMLRIT*SGTQPLLSVLA
Trigger: TGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp GGGGTCTGTGGAAATGATGTTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGC +
Preference number: 3 (lower is better)
Translates to: GVCGNDVKNHVL*HPASAFSPSSC
Trigger: GCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 3 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTCTGGGGTAGGGACCTaGTCGGTGGAGTCGATTAGG +
Preference number: 3 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSGVGT*SVESIR
Trigger: CCTAATCGACTCCACCGACAAGGTCCCTACCCCAGA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 72 bp GCTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCGTTTGTTAAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: AESQGSRPPVWI*QAKFPAFVKRP
Trigger: TGGCCTTTTAACAAACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR CCA 72 bp ACACACACACACACACACACACACACGTCAGCACCCTaGCTTTACTGTTCCTATGCACTATGGGGCCTTCAT +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTSAP*LYCSYALWGLH
Trigger: ATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 3 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 3 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGTAATACCCAACCCCTaGAAACGCGTCCCTCAAGTT +
Preference number: 3 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTVIPNP*KRVPQV
Trigger: AACTTGAGGGACGCGTTTCAAGGGGTTGGGTATTAC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCCATGTTTCCAAATCAA +
Preference number: 3 (lower is better)
Translates to: TSAPWLYCSYAL*GLHFQPMFPNQ
Trigger: TTGATTTGGAAACATGGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 72 bp AACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGACCATACGCACAAGAAA +
Preference number: 3 (lower is better)
Translates to: NLKIYHLSWCQL*KGPHTDHTHKK
Trigger: TTTCTTGTGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATATATCTTTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR CAA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: IVISSLSRLFLALNPTLNERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTGTTCTTGCCAAGACTaGATTCCCATTTTTAGTAGG +
Preference number: 3 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGCSCQD*IPIFSR
Trigger: CCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 72 bp TCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTaGGAAGTCAGAACTAAGATGGTAAAGATGCCATTT +
Preference number: 3 (lower is better)
Translates to: SRLFLALNPTLN*EVRTKMVKMPF
Trigger: AAATGGCATCTTTACCATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGAGCAGCGGGGGTCTTaGGCCCTGGCCAGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLEQRGS*ALASPV
Trigger: TACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTTGAAGGAAGCTGCGTaGCCCGAGGACCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLLKEAA*PEDRLH
Trigger: GTGCAGCCGGTCCTCGGGGCACGCAGCTTCCTTCAA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLTAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLSTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGAAAAGGGAGGTGGGTaGTTCGCTAACCCGTCGGCA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLEKGGG*FANPSA
Trigger: TGCCGACGGGTTAGCGAAGCACCCACCTCCCTTTTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLTWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTTTTCCTGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLFSWGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGGCACGTCTCGAAGCTaGTCCATGTCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSGTSRS*SMSSSN
Trigger: GTTCGATGACGACATGGAGCAGCTTCGAGACGTGCC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLRRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWTRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGACCGGCTGCCAGGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLDRLPG*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCCTGGCAGCCGGTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSKELQQ*LLCDPL
Trigger: GAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCTTTGCCGTCTTGTaGGGATCCGACCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSFAVL*GSDLRM
Trigger: CATCCTTAGGTCGGATCCGCACAAGACGGCAAAGCT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263710.8
ENST00000409078.8
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGCTTTGCCGTCTTGTaGGGATCCGACCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLSFAVL*GSDLRM
Trigger: CATCCTTAGGTCGGATCCGCACAAGACGGCAAAGCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263710.8
ENST00000409078.8
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGGTTGTGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWGCAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCACAACC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCAGGAGACTGAAGACTaGGCGAGTGACATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWQETED*ASDIQG
Trigger: GCCTTGAATGTCACTCGCCCAGTCTTCAGTCTCCTG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGGATCGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLGSLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLPPVWI*QAKFPA
Trigger: CGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGG...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAGTTCTTGGCCAACCTaGAATCGTTTCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSSSWPT*NRFPTS
Trigger: GGATGTGGGGAAACGATTGCAGGTTGGCCAAGAACT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGCTGCATCTCGAACCTaGCTGTTTGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSAASRT*LFGSPS
Trigger: ACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTGCCTCTTTGTTCGCTaGAGGTTACTAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLCLFVR*RLLRAC
Trigger: ACAGGCTCTTAGTAACCTTCAGCGAACAAAGAGGCA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGTCGAGGGATACGGCTaGTCCGTGCTAATCCTATTC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLVEGYG*SVLILF
Trigger: GAATAGGATTAGCACGGAGCAGCCGTATCCCTCGAC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCACACATGTGTAGGGTaGACGCACAAACACACACAA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSHTCVG*THKHTQ
Trigger: TTGTGTGTGTTTGTGCGTGCACCCTACACATGTGTG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSADLDR*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCGATCCAGATCTGC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACGCCCAGCCCCGCAGTaGAGCAGCGGGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYARPAPQ*SSGGLG
Trigger: CCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGCCCAGCCCCGCAGTaGAGCAGCGGGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQRPAPQ*SSGGLG
Trigger: CCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGAAAGGAGTCCCTTGTaGCATCTAGAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSERSPL*HLEPFE
Trigger: TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGAC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLQQFSD*GQETCD
Trigger: GTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQEVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGCCCCGAGGACCGGCTaGACCCTGCCCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTAPRTG*TLPRPW
Trigger: CCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCCAATCGTATTGCTTaGAGAGCCCACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLANRIA*RAHTGV
Trigger: AACACCAGTGTGGGCTCTCCAAGCAATACGATTGGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQSRGRR*ARRPPS
Trigger: ACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGAGCAGCGGGGGTCTTaGGCCCTGGCCAGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEEQRGS*ALASPV
Trigger: TACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCGCCCAGCCCCGCAGTaGAGCAGCGGGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRPAPQ*SSGGLG
Trigger: CCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEEKAGP*HRRRSG
Trigger: CCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGESGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMREVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEEVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTTATGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLLWESL*ASRVFI
Trigger: TATGAAGACTCTGGAAGCCCACAAAGACTCCCATAA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIALPVR*WRHASL
Trigger: GAGACTCGCATGCCGCCACCACCTCACTGGGAGGGC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLSRGRR*ARRPPS
Trigger: ACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAAAACTCTCTTGCTATaGGGGTCAGCAAACATCCGA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLKTLLL*GSANIR
Trigger: TCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTTT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQSGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGAGCAGCGGGGGTCTTaGGCCCTGGCCAGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVEQRGS*ALASPV
Trigger: TACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMREKAGP*HRRRSG
Trigger: CCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGACTTCTGTTTGTCTaGGAAATAGTCTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRLLFV*EIVYQF
Trigger: GAACTGATAGACTATTTCTCAGACAAACAGAAGTCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCTCCAAAAACATACTaGAAACTCTCTTGCTATGAG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSPKTY*KLSCYE
Trigger: CTCATAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSFCNT*ARQDSM
Trigger: CATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGGCTTGTATCTCGGCTaGTCTCACGGCTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPGLYLG*SHGWYR
Trigger: GCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGCAAGGCAAGGCAGCTaGAGCTGTCAGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKARQGS*SCQGLG
Trigger: CCCTAGACCCTGACAGCTGCAGCTGCCTTGCCTTGC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTGAAGGAAGCTGCGTaGCCCGAGGACCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLKEAA*PEDRLH
Trigger: GTGCAGCCGGTCCTCGGGGCACGCAGCTTCCTTCAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAAATTGTTGATCAAATaGAAAGGAGTCCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLKLLIK*KGVPCD
Trigger: GTCACAAGGGACTCCTTTCCATTTGATCAACAATTT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTATCAACAAAAGACCTaGTCCTGCTATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWYQQKT*SCYILS
Trigger: GCTCAAAATATAGCAGGACCAGGTCTTTTGTTGATA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQEKAGP*HRRRSG
Trigger: CCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGAGAGGGCAGTCACGATaGCTCCCTCCCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQRGQSR*LPPSRR
Trigger: ACGTCTGCTGGGAGGGAGTCATCGTGACTGCCCTCT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGAGAGTAAGAGCGCCTaGGAGCCTTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAESKSA*EPCGRE
Trigger: CTCCCTCCCACAAGGCTCTCAGGCGCTCTTACTCTC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTTTCCTGGGGAACTTaGCCGGCTGCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQFSWGT*PAARLG
Trigger: TCCCAGCCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACGGACAGGATGTCCATaGCCAGCAGAACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPRTGCP*PAEPPC
Trigger: ACAAGGTGGTTCTGCTGGGCATGGACATCCTGTCCG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCAAGGCAAGGCAGCTaGAGCTGTCAGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGARQGS*SCQGLG
Trigger: CCCTAGACCCTGACAGCTGCAGCTGCCTTGCCTTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGCCCCGAGGACCGGCTaGACCCTGCCCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEAPRTG*TLPRPW
Trigger: CCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGCTTTGCCGTCTTGTaGGGATCCGACCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSFAVL*GSDPPL
Trigger: AAGCGGAGGGTCGGATCCGCACAAGACGGCAAAGCT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000455322.6
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGETWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGACCCCTGACTCATGCTaGGTCGAGGGATACGGCTGC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGTPDSC*VEGYGC
Trigger: GCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQTAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRTAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAELPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTTTTCCTGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRFSWGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTTTTCCTGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLFSWGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAILAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGESGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGCACGTCTCGAAGCTaGTCCATGTCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGTSRS*SMSSSN
Trigger: GTTCGATGACGACATGGAGCAGCTTCGAGACGTGCC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGCAAGGCAAGGCAGCTaGAGCTGTCAGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLARQGS*SCQGLG
Trigger: CCCTAGACCCTGACAGCTGCAGCTGCCTTGCCTTGC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQTWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQTWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCCAAACCGATCAAGTaGAGGAAAGCCCCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVPKPIK*RKAPSR
Trigger: CCTGCTCGGGGCTTTCCTCCACTTGATCGGTTTGGG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTEKAGP*HRRRSG
Trigger: CCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CAA 72 bp AGGGGGTGGGGAAAGGTCTCTGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAGAGACAGGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: RGWGKVSERHHR*LLGLHKRQVLP
Trigger: TGGCAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGATCGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGGSLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESFCNT*ARQDSM
Trigger: CATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAAGTTCTTGGCCAACCTaGAATCGTTTCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSSWPT*NRFPTS
Trigger: GGATGTGGGGAAACGATTGCAGGTTGGCCAAGAACT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLSTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAATGTATTTCAGGATTaGAACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLNVFQD*NFDLEV
Trigger: AACCTCAAGGTCAAAGTTGCAATCCTGAAATACATT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYASGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGCACGTCTCGAAGCTaGTCCATGTCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGGTSRS*SMSSSN
Trigger: GTTCGATGACGACATGGAGCAGCTTCGAGACGTGCC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAGCACCTTGATGCACTaGTCCGGGTGGATGGAACTG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSTLMH*SGWMEL
Trigger: CAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKFSPSS*SGLCTA
Trigger: TGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADEVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAETWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGTTGTGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGCAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCACAACC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACAGGAGACTGAAGACTaGGCGAGTGACATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEQETED*ASDIQG
Trigger: GCCTTGAATGTCACTCGCCCAGTCTTCAGTCTCCTG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSRGRR*ARRPPS
Trigger: ACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACGCCCAGCCCCGCAGTaGAGCAGCGGGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTRPAPQ*SSGGLG
Trigger: CCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
3UTR CAA 72 bp AGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTaGTCGGTGGAGTCGATTAGGGAGAGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RIPLHGSSGVGT*SVESIRESWKE
Trigger: CTCCTTCCAGCTCTCCCTAATCGACTCCACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAETDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTTDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACGATTTAGACTCTCTTaGGAGCTGGAAGATGAGCGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGERFRLS*ELEDER
Trigger: CCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACGATTTAGACTCTCTTaGGAGCTGGAAGATGAGCGG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKRFRLS*ELEDER
Trigger: CCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEEGPSR*HRFGTN
Trigger: GTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGGATCGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLGSLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTGGGGACCATGCGTGTaGACACAGTGCCAACATAAC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQWGPCV*TQCQHN
Trigger: GTTATGTTGGCACTGTGTTCACACGCATGGTCCCCA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGTTTTTCGTTACTGTTaGCGCTGCGGACCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQVFRYC*RCGPES
Trigger: GCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAAC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAGCACCTTGATGCACTaGTCCGGGTGGATGGAACTG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSTLMH*SGWMEL
Trigger: CAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQFSPSS*SGLCTA
Trigger: TGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGCTTTGCCGTCTTGTaGGGATCCGACCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSFAVL*GSDLSP
Trigger: TGGACTCAGGTCGGATCCGCACAAGACGGCAAAGCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLGCSHG*YRGCTP
Trigger: AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGTTGTGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGCAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCACAACC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCCAATCGTATTGCTTaGAGAGCCCACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEANRIA*RAHTGV
Trigger: AACACCAGTGTGGGCTCTCCAAGCAATACGATTGGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAETLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGAGCTGCTGTTGCTGTTaGTGGTCTGGGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSCCCC*WSGPSL
Trigger: TAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYASIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATGTTCTGTTTTTCATTaGAACAGGGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAICSVFH*NRGPAG
Trigger: CCCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACAGGCTTCTTGCTCCTaGAGTCTCCTAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEQASCS*SLLTAK
Trigger: CTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGCCTG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSCRRC*WHLSRG
Trigger: ACCCCTACTCAGATGCCATCAACACCTACGACAAGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQSCRRC*WHLSRG
Trigger: ACCCCTACTCAGATGCCATCAACACCTACGACAAGA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLKELQQ*LLCDPL
Trigger: GAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGGCCAAGAGACCTGTaGCGTGATTGTATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKRPRDL*RDCISK
Trigger: CTTAGAGATACAATCACGTCACAGGTCTCTTGGCCT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQQQFSD*GQETCD
Trigger: GTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGTTTTTCGTTACTGTTaGCGCTGCGGACCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTVFRYC*RCGPES
Trigger: GCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAAC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACATGGTCTGGTCATaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGENMVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCATGACCAGACCATGTT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAGCAGAGTTTGGTCCTaGTCCCTCACAGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISRVWS*SLTESL
Trigger: TAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGERTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVVQVL*FSAEVT
Trigger: AGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTGCACCCCTGACTCATaGTGGGTCGAGGGATACGGC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTCTPDS*WVEGYG
Trigger: GCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGTGGTTGAGAACTTCTaGTACATCCTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGVVENF*YILSLP
Trigger: CGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCAC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAERRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQMLRIT*SGTQPL
Trigger: CAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACAT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQMLRIT*SGTQPL
Trigger: CAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACAT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAMLRIT*SGTQPL
Trigger: CAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACAT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATACACACATGTGTAGGGTaGACGCACAAACACACACAA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIHTCVG*THKHTQ
Trigger: TTGTGTGTGTTTGTGCGTGCACCCTACACATGTGTG...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGCAAGGCAAGGCAGCTaGAGCTGTCAGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGARQGS*SCQGLG
Trigger: CCCTAGACCCTGACAGCTGCAGCTGCCTTGCCTTGC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGTACTTGAAGGAAGCTaGGTGCCCCGAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGVLEGS*VPRGPA
Trigger: AGCCGGTCCTCGGGGCACGCAGCTTCCTTCAAGTAC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTTTAGCAGCAGAGTTTaGTCCTGCTCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQFSSRV*SCSLTE
Trigger: CTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTTTAGCAGCAGAGTTTaGTCCTGCTCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVFSSRV*SCSLTE
Trigger: CTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCTGCATCTCGAACCTaGCTGTTTGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGAASRT*LFGSPS
Trigger: ACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQREDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQTRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGCCAATCGTATTGCTTaGAGAGCCCACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRANRIA*RAHTGV
Trigger: AACACCAGTGTGGGCTCTCCAAGCAATACGATTGGC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYACCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGCTGCTGTTGCTGTTaGTGGTCTGGGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSCCCC*WSGPSL
Trigger: TAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRSIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNSRGRR*ARRPPS
Trigger: ACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGA...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLEGPSR*HRFGTN
Trigger: GTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEEGPSR*HRFGTN
Trigger: GTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTCGCGGCTGCACCCCTaGCTCATGCTGGGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSSRLHP*LMLGRG
Trigger: CCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGAAAGGAGTCCCTTGTaGCATCTAGAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIERSPL*HLEPFE
Trigger: TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAICLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKCLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLPPVWI*QAKFPA
Trigger: CGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGAC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEQQFSD*GQETCD
Trigger: GTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTGGGGACCATGCGTGTaGACACAGTGCCAACATAAC +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQWGPCV*TQCQHN
Trigger: GTTATGTTGGCACTGTGTTCACACGCATGGTCCCCA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGTTTTTCGTTACTGTTaGCGCTGCGGACCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFVFRYC*RCGPES
Trigger: GCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAAC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACCTGTGTTTCAAAGATaGAATCTGGGGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEPVFQR*NLGNGN
Trigger: GTTGCCATTCCCCAGATTGCATCTTTGAAACACAGG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGTTCTTGGCCAACCTaGAATCGTTTCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSSWPT*NRFPTS
Trigger: GGATGTGGGGAAACGATTGCAGGTTGGCCAAGAACT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTAGCAGAGTTTGGTCCTaGTCCCTCACAGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSRVWS*SLTESL
Trigger: TAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATCTGGCTTCTATTCTTaGTTCGGAATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSGFYS*FGISIM
Trigger: CATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQVVQVL*FSAEVT
Trigger: AGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCAC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGTGGTTGAGAACTTCTaGTACATCCTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLVVENF*YILSLP
Trigger: CGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCAC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADERRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFFSPSS*SGLCTA
Trigger: TGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCACACATGTGTAGGGTaGACGCACAAACACACACAA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVHTCVG*THKHTQ
Trigger: TTGTGTGTGTTTGTGCGTGCACCCTACACATGTGTG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGCCCCGAGGACCGGCTaGACCCTGCCCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVAPRTG*TLPRPW
Trigger: CCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGTACTTGAAGGAAGCTaGGTGCCCCGAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLVLEGS*VPRGPA
Trigger: AGCCGGTCCTCGGGGCACGCAGCTTCCTTCAAGTAC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCACAGGCTTCTTCTTaGTCCTGGAGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSQASS*SWSLLT
Trigger: TGTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTCACAGGCTTCTTCTTaGTCCTGGAGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQSQASS*SWSLLT
Trigger: TGTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTTTAGCAGCAGAGTTTaGTCCTGCTCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRFSSRV*SCSLTE
Trigger: CTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVLQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQLQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQADLDR*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCGATCCAGATCTGC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGADLDR*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCGATCCAGATCTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYALVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRLEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADETAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFKNHVL*HPASAF
Trigger: GAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGCSYAL*GLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCTTCTTCTTGCTCCTaGAGTCTCCTAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGASSCS*SLLTAK
Trigger: CTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGAAGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGATTCCTGGAGCCATATaGGCGCTCAGAGCAAACACT +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQIPGAI*ALRANT
Trigger: AGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAAT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCAGCAAACATCCGAGTaGAGATCTCACACAACCTTT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVQQTSE*RSHTTF
Trigger: AAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCAGCAAACATCCGAGTaGAGATCTCACACAACCTTT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGQQTSE*RSHTTF
Trigger: AAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTAAAACTCTCTTGCTATaGGGGTCAGCAAACATCCGA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRKTLLL*GSANIR
Trigger: TCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTTT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGAAAGGAGTCCCTTGTaGCATCTAGAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRERSPL*HLEPFE
Trigger: TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFPPVWI*QAKFPA
Trigger: CGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGGCCAAGAGACCTGTaGCGTGATTGTATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRPRDL*RDCISK
Trigger: CTTAGAGATACAATCACGTCACAGGTCTCTTGGCCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTGTGCGGATCCGACCTaGGTCCAGGCCTATGTACTC +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLCADPT*VQAYVL
Trigger: GAGTACATAGGCCTGGACTCAGGTCGGATCCGCACA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACCTGTGTTTCAAAGATaGAATCTGGGGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAPVFQR*NLGNGN
Trigger: GTTGCCATTCCCCAGATTGCATCTTTGAAACACAGG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSFCNT*ARQDSM
Trigger: CATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCGGACAGGATGTCCATaGCCAGCAGAACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGRTGCP*PAEPPC
Trigger: ACAAGGTGGTTCTGCTGGGCATGGACATCCTGTCCG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGCAGAGTTTGGTCCTaGTCCCTCACAGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSRVWS*SLTESL
Trigger: TAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCTGGCTTCTATTCTTaGTTCGGAATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSGFYS*FGISIM
Trigger: CATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLVVQVL*FSAEVT
Trigger: AGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCAC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGTGGTTGAGAACTTCTaGTACATCCTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFVVENF*YILSLP
Trigger: CGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCAC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADRRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGTACTTGAAGGAAGCTaGGTGCCCCGAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADVLEGS*VPRGPA
Trigger: AGCCGGTCCTCGGGGCACGCAGCTTCCTTCAAGTAC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTLQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTTRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLLEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYASARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLCSYAL*GLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNALPVR*WRHASL
Trigger: GAGACTCGCATGCCGCCACCACCTCACTGGGAGGGC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTGTTCTGTTTTTCATTaGAACAGGGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQCSVFH*NRGPAG
Trigger: CCCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGCTTCTTCTTGCTCCTaGAGTCTCCTAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRASSCS*SLLTAK
Trigger: CTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGAAGC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000409078.8
3UTR CAA 72 bp AACGGCTTAGGCAGAACTTTGAGGGGAGGAAACAAGTaGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: NGLGRTLRGGNK*VLNLNHRVAQR
Trigger: TCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADETDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADERRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACAGCAAACATCCGAGTaGAGATCTCACACAACCTTT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTQQTSE*RSHTTF
Trigger: AAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRCLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVCLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADELAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATGGGGACCATGCGTGTaGACACAGTGCCAACATAAC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQWGPCV*TQCQHN
Trigger: GTTATGTTGGCACTGTGTTCACACGCATGGTCCCCA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSFCNT*ARQDSM
Trigger: CATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTAACATGGTCTGGTCATaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFNMVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCATGACCAGACCATGTT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGAGAGGCATTGAGTGTTaGTATAAGGCAGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQRGIEC*YKAETD
Trigger: ATCTGTCTCTGCCTTATAGCAACACTCAATGCCTCT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATATGTGGCACAATCTTaGTTAGTGTTAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPYVAQS*LVLKSV
Trigger: CACAGACTTTAACACTAAGCAAGATTGTGCCACATA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNGWYRG*TPDSCW
Trigger: CCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGTTTTGTATGAAGACTaGAATACAGGCCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGVLYED*NTGLAS
Trigger: GGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACAGTGGGCTCTGCACTaGAATAGCAAATACGTTATT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAQWALH*NSKYVI
Trigger: AATAACGTATTTGCTATTGCAGTGCAGAGCCCACTG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCAAAAGACCTGGTCCTaGTATATTTTGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQQKTWS*YILSQS
Trigger: GCTTTGGCTCAAAATATAGCAGGACCAGGTCTTTTG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCTGAATCAGCAATCTTaGTATGAGGGTCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLNQQS*YEGQQT
Trigger: TGTTTGCTGACCCTCATAGCAAGATTGCTGATTCAG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452274.6
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTCAAAGATGCAATCTaGGGAATGGCAACAATGCAC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQFKDAI*GMATMH
Trigger: GTGCATTGTTGCCATTCCCCAGATTGCATCTTTGAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADETRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCGCCTGAGAGCCTTGTaGGAGGGAGCGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNRLRAL*EGAVGM
Trigger: CATCCCCACCGCTCCCTCCCACAAGGCTCTCAGGCG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTATGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLWESL*ASRVFI
Trigger: TATGAAGACTCTGGAAGCCCACAAAGACTCCCATAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTAGCTGCTGTTGCTGTTaGTGGTCTGGGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSCCCC*WSGPSL
Trigger: TAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACAGGAGACTGAAGACTaGGCGAGTGACATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQQETED*ASDIQG
Trigger: GCCTTGAATGTCACTCGCCCAGTCTTCAGTCTCCTG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNALPVR*WRHASL
Trigger: GAGACTCGCATGCCGCCACCACCTCACTGGGAGGGC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATTGTTAGCAAAGTCCTaGTGGGATTCTACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKLLAKS*WDSTKF
Trigger: GAACTTTGTAGAATCCCACCAGGACTTTGCTAACAA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVTDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATTTTTCCTGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYFSWGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTTTTCCTGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSFSWGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTAAAACTCTCTTGCTATaGGGGTCAGCAAACATCCGA +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFKTLLL*GSANIR
Trigger: TCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTTT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQSCRRC*WHLSRG
Trigger: ACCCCTACTCAGATGCCATCAACACCTACGACAAGA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATTAAATCTTGCTGGTTaGTTTCTCAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELNLAG*FLRISL
Trigger: GAGGGAAATTCTGAGAAATCAACCAGCAAGATTTAA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATTAAATCTTGCTGGTTaGTTTCTCAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKLNLAG*FLRISL
Trigger: GAGGGAAATTCTGAGAAATCAACCAGCAAGATTTAA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLKELQQ*LLCDPL
Trigger: GAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTT...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQPPVWI*QAKFPA
Trigger: CGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTGGGGACCATGCGTGTaGACACAGTGCCAACATAAC +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLWGPCV*TQCQHN
Trigger: GTTATGTTGGCACTGTGTTCACACGCATGGTCCCCA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAGAGGCATTGAGTGTTaGTATAAGGCAGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRGIEC*YKAETD
Trigger: ATCTGTCTCTGCCTTATAGCAACACTCAATGCCTCT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAGAGGCATTGAGTGTTaGTATAAGGCAGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAERGIEC*YKAETD
Trigger: ATCTGTCTCTGCCTTATAGCAACACTCAATGCCTCT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACAAGATCTGTACTTGTaGTCAGAACTCTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVQDLYL*SELSWH
Trigger: ATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACAAGATCTGTACTTGTaGTCAGAACTCTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVQDLYL*SELSWH
Trigger: ATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACAAGATCTGTACTTGTaGTCAGAACTCTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEQDLYL*SELSWH
Trigger: ATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCAAGATCTGTACTTGTaGTCAGAACTCTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRQDLYL*SELSWH
Trigger: ATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGGCACGTCTCGAAGCTaGTCCATGTCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVGTSRS*SMSSSN
Trigger: GTTCGATGACGACATGGAGCAGCTTCGAGACGTGCC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAGCACCTTGATGCACTaGTCCGGGTGGATGGAACTG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSTLMH*SGWMEL
Trigger: CAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYRRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEFSPSS*SGLCTA
Trigger: TGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACAAAAGACCTGGTCCTaGTATATTTTGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVQKTWS*YILSQS
Trigger: GCTTTGGCTCAAAATATAGCAGGACCAGGTCTTTTG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCAAAAGACCTGGTCCTaGTATATTTTGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRQKTWS*YILSQS
Trigger: GCTTTGGCTCAAAATATAGCAGGACCAGGTCTTTTG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATTTGAAGGAAGCTGCGTaGCCCGAGGACCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNLKEAA*PEDRLH
Trigger: GTGCAGCCGGTCCTCGGGGCACGCAGCTTCCTTCAA...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTCAAAGATGCAATCTaGGGAATGGCAACAATGCAC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTFKDAI*GMATMH
Trigger: GTGCATTGTTGCCATTCCCCAGATTGCATCTTTGAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCA +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLGILPG*PSPNRS
Trigger: TGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAAATTGTTGATCAAATaGAAAGGAGTCCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKKLLIK*KGVPCD
Trigger: GTCACAAGGGACTCCTTTCCATTTGATCAACAATTT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTTATGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLLWESL*ASRVFI
Trigger: TATGAAGACTCTGGAAGCCCACAAAGACTCCCATAA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGCTGCTGTTGCTGTTaGTGGTCTGGGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESCCCC*WSGPSL
Trigger: TAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVALPVR*WRHASL
Trigger: GAGACTCGCATGCCGCCACCACCTCACTGGGAGGGC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTGCCTCTTTGTTCGCTaGAGGTTACTAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGCLFVR*RLLRAC
Trigger: ACAGGCTCTTAGTAACCTTCAGCGAACAAAGAGGCA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATGCCTCTTTGTTCGCTaGAGGTTACTAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQCLFVR*RLLRAC
Trigger: ACAGGCTCTTAGTAACCTTCAGCGAACAAAGAGGCA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADERHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACGATTTAGACTCTCTTaGGAGCTGGAAGATGAGCGG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADERFRLS*ELEDER
Trigger: CCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGGATCGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTGSLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTATTCCTGGAGCCATATaGGCGCTCAGAGCAAACACT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLIPGAI*ALRANT
Trigger: AGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAAT...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESCRRC*WHLSRG
Trigger: ACCCCTACTCAGATGCCATCAACACCTACGACAAGA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADKELQQ*LLCDPL
Trigger: GAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATCTCCAAAAACATACTaGAAACCTTGCTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSPKTY*KPCYEG
Trigger: ACCCTCATAGCAAGGTTTTCAGTATGTTTTTGGAGA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455322.6
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTGTACAAGAGACTTCTaGTGGAAACAAATTTCCTTC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGCTRDF*WKQISF
Trigger: GAAGGAAATTTGTTTCCATCAGAAGTCTCTTGTACA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452274.6
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGTTTTTCGTTACTGTTaGCGCTGCGGACCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVVFRYC*RCGPES
Trigger: GCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAAC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACGGACAGGATGTCCATaGCCAGCAGAACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTRTGCP*PAEPPC
Trigger: ACAAGGTGGTTCTGCTGGGCATGGACATCCTGTCCG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNSTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTAGCAGAGTTTGGTCCTaGTCCCTCACAGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSRVWS*SLTESL
Trigger: TAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATGTGGCACAATCTTaGTTAGTGTTAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQYVAQS*LVLKSV
Trigger: CACAGACTTTAACACTAAGCAAGATTGTGCCACATA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTATGTGGCACAATCTTaGTTAGTGTTAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQYVAQS*LVLKSV
Trigger: CACAGACTTTAACACTAAGCAAGATTGTGCCACATA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGATCTCCAAGTAAGTTaGATATATGTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYADLQVS*IYVAQS
Trigger: AGATTGTGCCACATATATGCAACTTACTTGGAGATC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGATCTCCAAGTAAGTTaGATATATGTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVDLQVS*IYVAQS
Trigger: AGATTGTGCCACATATATGCAACTTACTTGGAGATC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCTCTGCTCCCAATCATaGTTGTCATCAGATAATATT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLCSQS*LSSDNI
Trigger: AATATTATCTGATGACAAGCATGATTGGGAGCAGAG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTVVQVL*FSAEVT
Trigger: AGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCAC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAGCTTTGCCGTCTTGTaGGGATCCGACCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSFAVL*GSDLRM
Trigger: CATCCTTAGGTCGGATCCGCACAAGACGGCAAAGCT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000409078.8
ENST00000452274.6
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGTGGTTGAGAACTTCTaGTACATCCTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEVVENF*YILSLP
Trigger: CGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCAC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELRRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGTTTTGTATGAAGACTaGAATACAGGCCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQVLYED*NTGLAS
Trigger: GGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGTTTTGTATGAAGACTaGAATACAGGCCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFVLYED*NTGLAS
Trigger: GGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCACACATGTGTAGGGTaGACGCACAAACACACACAA +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTHTCVG*THKHTQ
Trigger: TTGTGTGTGTTTGTGCGTGCACCCTACACATGTGTG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACAGCTTTGCCGTCTTGTaGGGATCCGACCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNSFAVL*GSDPPL
Trigger: AAGCGGAGGGTCGGATCCGCACAAGACGGCAAAGCT...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397587.7
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCCTCACAGGCTTCTTaGTCCTGGAGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSSQAS*SWSLLT
Trigger: TGTTAGGAGACTCCAGGAGCAAGAAGCCTGTGAGGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSTWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADERRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTSRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTTRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAAAATTGTTGATCAAATaGAAAGGAGTCCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAKLLIK*KGVPCD
Trigger: GTCACAAGGGACTCCTTTCCATTTGATCAACAATTT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTAGCAAAGTCCTGGTaGGATTCTACAAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRLAKSW*DSTKFL
Trigger: TAAGAACTTTGTAGAATCCCACCAGGACTTTGCTAA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTTGTTAGCAAAGTCCTaGTGGGATTCTACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLLLAKS*WDSTKF
Trigger: GAACTTTGTAGAATCCCACCAGGACTTTGCTAACAA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCGATTTAGACTCTCTTaGGAGCTGGAAGATGAGCGG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADRFRLS*ELEDER
Trigger: CCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGGATCGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSGSLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR TCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATATTCCTGGAGCCATATaGGCGCTCAGAGCAAACACT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADIPGAI*ALRANT
Trigger: AGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAAT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCTCCAAAAACATACTaGAAACTCTCTTGCTATGAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSPKTY*KLSCYE
Trigger: CTCATAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATCTCCAAAAACATACTaGAAACTCTCTTGCTATGAG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSPKTY*KLSCYE
Trigger: CTCATAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTCLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVSCRRC*WHLSRG
Trigger: ACCCCTACTCAGATGCCATCAACACCTACGACAAGA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTAAATCTTGCTGGTTaGTTTCTCAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTLNLAG*FLRISL
Trigger: GAGGGAAATTCTGAGAAATCAACCAGCAAGATTTAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVPPVWI*QAKFPA
Trigger: CGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGG...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSLAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAATCCCACATTAAACTaGGAAGTCAGAACTAAGATG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVNPTLN*EVRTKM
Trigger: CATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAATCCCACATTAAACTaGGAAGTCAGAACTAAGATG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAENPTLN*EVRTKM
Trigger: CATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTAGGCCAAGAGACCTGTaGCGTGATTGTATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLRPRDL*RDCISK
Trigger: CTTAGAGATACAATCACGTCACAGGTCTCTTGGCCT...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATCAGCAATCTTGCTATaGGGGTCAGCAAACATCCGA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESAILL*GSANIR
Trigger: TCGGATGTTTGCTGACCCTCATAGCAAGATTGCTGA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452274.6
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAACATGGTCTGGTCATaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADENMVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCATGACCAGACCATGTT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACCGGACAGGATGTCCATaGCCAGCAGAACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNRTGCP*PAEPPC
Trigger: ACAAGGTGGTTCTGCTGGGCATGGACATCCTGTCCG...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATATGTGGCACAATCTTaGTTAGTGTTAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVYVAQS*LVLKSV
Trigger: CACAGACTTTAACACTAAGCAAGATTGTGCCACATA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGATCTCCAAGTAAGTTaGATATATGTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRDLQVS*IYVAQS
Trigger: AGATTGTGCCACATATATGCAACTTACTTGGAGATC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGCTGCATCTCGAACCTaGCTGTTTGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVAASRT*LFGSPS
Trigger: ACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADELQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNTRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAAATTGTTGATCAAATaGAAAGGAGTCCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVKLLIK*KGVPCD
Trigger: GTCACAAGGGACTCCTTTCCATTTGATCAACAATTT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLLEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAAGCTGCTGTTGCTGTTaGTGGTCTGGGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTSCCCC*WSGPSL
Trigger: TAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATATCAACAAAAGACCTaGTCCTGCTATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTYQQKT*SCYILS
Trigger: GCTCAAAATATAGCAGGACCAGGTCTTTTGTTGATA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTTAGCAAAGTCCTGGTaGGATTCTACAAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLAKSW*DSTKFL
Trigger: TAAGAACTTTGTAGAATCCCACCAGGACTTTGCTAA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGCTTCTTCTTGCTCCTaGAGTCTCCTAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLASSCS*SLLTAK
Trigger: CTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGAAGC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
3UTR CAA 72 bp GAGACCATGTTAGAACTGAACGGCTTAGGCAGAACTTaGAGGGGAGGAAACAAGTTGGTGCTCAATCTGAAT +
Preference number: 4 (lower is better)
Translates to: ETMLELNGLGRT*RGGNKLVLNLN
Trigger: ATTCAGATTGAGCACCAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCCGTTCAGTTCTAACATGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTGCCTCTTTGTTCGCTaGAGGTTACTAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVCLFVR*RLLRAC
Trigger: ACAGGCTCTTAGTAACCTTCAGCGAACAAAGAGGCA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNTDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACAGCAAACATCCGAGTaGAGATCTCACACAACCTTT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEQQTSE*RSHTTF
Trigger: AAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAAAACTCTCTTGCTATaGGGGTCAGCAAACATCCGA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEKTLLL*GSANIR
Trigger: TCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTTT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLCLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNKELQQ*LLCDPL
Trigger: GAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTT...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTAATCCCACATTAAACTaGGAAGTCAGAACTAAGATG +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFNPTLN*EVRTKM
Trigger: CATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGCCAGGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVARLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCCTGGC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGAATGTATTTCAGGATTaGAACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRNVFQD*NFDLEV
Trigger: AACCTCAAGGTCAAAGTTGCAATCCTGAAATACATT...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAATGTATTTCAGGATTaGAACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAENVFQD*NFDLEV
Trigger: AACCTCAAGGTCAAAGTTGCAATCCTGAAATACATT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAATGTATTTCAGGATTaGAACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLNVFQD*NFDLEV
Trigger: AACCTCAAGGTCAAAGTTGCAATCCTGAAATACATT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGTTTTGTATGAAGACTaGAATACAGGCCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTVLYED*NTGLAS
Trigger: GGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYRRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACAGTGGGCTCTGCACTaGAATAGCAAATACGTTATT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQQWALH*NSKYVI
Trigger: AATAACGTATTTGCTATTGCAGTGCAGAGCCCACTG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTCACAGGCTTCTTCTTaGTCCTGGAGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSQASS*SWSLLT
Trigger: TGTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTTCAAAGATGCAATCTaGGGAATGGCAACAATGCAC +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGFKDAI*GMATMH
Trigger: GTGCATTGTTGCCATTCCCCAGATTGCATCTTTGAA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATTTAGCAGCAGAGTTTaGTCCTGCTCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTFSSRV*SCSLTE
Trigger: CTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGCCAATCGTATTGCTTaGAGAGCCCACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTANRIA*RAHTGV
Trigger: AACACCAGTGTGGGCTCTCCAAGCAATACGATTGGC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATTATGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQLWESL*ASRVFI
Trigger: TATGAAGACTCTGGAAGCCCACAAAGACTCCCATAA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADELLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSSIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSKNHVL*HPASAF
Trigger: GAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADCSYAL*GLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTATCAACAAAAGACCTaGTCCTGCTATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFYQQKT*SCYILS
Trigger: GCTCAAAATATAGCAGGACCAGGTCTTTTGTTGATA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCAGGAGACTGAAGACTaGGCGAGTGACATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYQETED*ASDIQG
Trigger: GCCTTGAATGTCACTCGCCCAGTCTTCAGTCTCCTG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATGTTCTGTTTTTCATTaGAACAGGGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTCSVFH*NRGPAG
Trigger: CCCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYEGPSR*HRFGTN
Trigger: GTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGGAGTCCCTTGTaGCATCTAGAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADERSPL*HLEPFE
Trigger: TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNKELQQ*LLCDPL
Trigger: GAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTT...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAAGGCCAAGAGACCTGTaGCGTGATTGTATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTRPRDL*RDCISK
Trigger: CTTAGAGATACAATCACGTCACAGGTCTCTTGGCCT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGAC +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNQQFSD*GQETCD
Trigger: GTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTG...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACTGAAAACCTTGCTATaGGGGTCAGCAAACATCCGA +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTLKTLL*GSANIR
Trigger: TCGGATGTTTGCTGACCCTCATAGCAAGGTTTTCAG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000455322.6
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGCCTGTGTTTCAAAGATaGAATCTGGGGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVPVFQR*NLGNGN
Trigger: GTTGCCATTCCCCAGATTGCATCTTTGAAACACAGG...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGAGGCATTGAGTGTTaGTATAAGGCAGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADERGIEC*YKAETD
Trigger: ATCTGTCTCTGCCTTATAGCAACACTCAATGCCTCT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATCTGGCTTCTATTCTTaGTTCGGAATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESGFYS*FGISIM
Trigger: CATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACAAGATCTGTACTTGTaGTCAGAACTCTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEQDLYL*SELSWH
Trigger: ATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGTCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVSGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTTTAGCAGCAGAGTTTaGTCCTGCTCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSFSSRV*SCSLTE
Trigger: CTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGCTGCATCTCGAACCTaGCTGTTTGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNAASRT*LFGSPS
Trigger: ACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGGTTGTGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNGCAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCACAACC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVSARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTGTTCTGTTTTTCATTaGAACAGGGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNCSVFH*NRGPAG
Trigger: CCCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACA...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CAA 72 bp AGTACTTATCAACAAAAGACCTGGTCCTGCTATATTTaGAGCCAAAGCTCGTCAGTAATACCCAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: STYQQKTWSCYI*SQSSSVIPNPL
Trigger: CAAGGGGTTGGGTATTACTGACGAGCTTTGGCTCAAAATATAGCAGGACCAGGTCTTTTGTTGATAAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTAGACTTCTGTTTGTCTaGGAAATAGTCTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTRLLFV*EIVYQF
Trigger: GAACTGATAGACTATTTCTCAGACAAACAGAAGTCT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAAGACTTCTGTTTGTCTaGGAAATAGTCTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQRLLFV*EIVYQF
Trigger: GAACTGATAGACTATTTCTCAGACAAACAGAAGTCT...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGCGATTTAGACTCTCTTaGGAGCTGGAAGATGAGCGG +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELRFRLS*ELEDER
Trigger: CCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCG...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELEGPSR*HRFGTN
Trigger: GTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTC...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATATTCCTGGAGCCATATaGGCGCTCAGAGCAAACACT +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNIPGAI*ALRANT
Trigger: AGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAAT...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACAGCAAACATCCGAGTaGAGATCTCACACAACCTTT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTQQTSE*RSHTTF
Trigger: AAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGAAAGGAGTCCCTTGTaGCATCTAGAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTERSPL*HLEPFE
Trigger: TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTTAAATCTTGCTGGTTaGTTTCTCAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGLNLAG*FLRISL
Trigger: GAGGGAAATTCTGAGAAATCAACCAGCAAGATTTAA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATTAAATCTTGCTGGTTaGTTTCTCAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQLNLAG*FLRISL
Trigger: GAGGGAAATTCTGAGAAATCAACCAGCAAGATTTAA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCTCACATTCTGCTTCTaGATCAGCAATCTTGCTATG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADLTFCF*ISNLAM
Trigger: CATAGCAAGATTGCTGATTCAGAAGCAGAATGTGAG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452274.6
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACAGCAGAGTTTGGTCCTaGTCCCTCACAGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNSRVWS*SLTESL
Trigger: TAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCT...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAGAGGCATTGAGTGTTaGTATAAGGCAGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADRGIEC*YKAETD
Trigger: ATCTGTCTCTGCCTTATAGCAACACTCAATGCCTCT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCTCTGCTCCCAATCATaGTTGTCATCAGATAATATT +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTLCSQS*LSSDNI
Trigger: AATATTATCTGATGACAAGCATGATTGGGAGCAGAG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTCTGGCTTCTATTCTTaGTTCGGAATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVSGFYS*FGISIM
Trigger: CATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYVVQVL*FSAEVT
Trigger: AGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCAC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGGTGGTTGAGAACTTCTaGTACATCCTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELVVENF*YILSLP
Trigger: CGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCAC...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVRRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCTAATCCTGTTTTTCTaGAATCTGCTACACCTCATA +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTLILFF*NLLHLI
Trigger: TATGAGGTGTAGCAGATTGCAGAAAAACAGGATTAG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTTCAAAGATGCAATCTaGGGAATGGCAACAATGCAC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVFKDAI*GMATMH
Trigger: GTGCATTGTTGCCATTCCCCAGATTGCATCTTTGAA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSLEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVKNHVL*HPASAF
Trigger: GAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTT...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATTAGCAAAGTCCTGGTaGGATTCTACAAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQLAKSW*DSTKFL
Trigger: TAAGAACTTTGTAGAATCCCACCAGGACTTTGCTAA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCTTCCCTCATGTGTCTaGACTCTAAGGATGCGTATG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSLPSCV*TLRMRM
Trigger: CATACGCATCCTTAGAGTCCAGACACATGAGGGAAG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR TCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGTCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVSCRRC*WHLSRG
Trigger: ACCCCTACTCAGATGCCATCAACACCTACGACAAGA...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADESGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAATCCCACATTAAACTaGGAAGTCAGAACTAAGATG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADENPTLN*EVRTKM
Trigger: CATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATAACATGGTCTGGTCATaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNNMVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCATGACCAGACCATGTT...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACAGTGGGCTCTGCACTaGAATAGCAAATACGTTATT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTQWALH*NSKYVI
Trigger: AATAACGTATTTGCTATTGCAGTGCAGAGCCCACTG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVMLRIT*SGTQPL
Trigger: CAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACAT...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATTCAAAGATGCAATCTaGGGAATGGCAACAATGCAC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTFKDAI*GMATMH
Trigger: GTGCATTGTTGCCATTCCCCAGATTGCATCTTTGAA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNADLDR*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCGATCCAGATCTGC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR CCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATTCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATTATGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTLWESL*ASRVFI
Trigger: TATGAAGACTCTGGAAGCCCACAAAGACTCCCATAA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCCTGTGTTTCAAAGATaGAATCTGGGGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNPVFQR*NLGNGN
Trigger: GTTGCCATTCCCCAGATTGCATCTTTGAAACACAGG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGAACATGGTCTGGTCATaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVNMVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCATGACCAGACCATGTT...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGCTCTGCTCCCAATCATaGTTGTCATCAGATAATATT +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVLCSQS*LSSDNI
Trigger: AATATTATCTGATGACAAGCATGATTGGGAGCAGAG...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATTCTGGCTTCTATTCTTaGTTCGGAATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYSGFYS*FGISIM
Trigger: CATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGA...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTSSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELSARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVCSYAL*GLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACA...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGCTTCTTCTTGCTCCTaGAGTCTCCTAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVASSCS*SLLTAK
Trigger: CTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGAAGC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAAGACTTCTGTTTGTCTaGGAAATAGTCTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTRLLFV*EIVYQF
Trigger: GAACTGATAGACTATTTCTCAGACAAACAGAAGTCT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAATGTATTTCAGGATTaGAACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADNVFQD*NFDLEV
Trigger: AACCTCAAGGTCAAAGTTGCAATCCTGAAATACATT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGTTTTGTATGAAGACTaGAATACAGGCCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNVLYED*NTGLAS
Trigger: GGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGCAGTGGGCTCTGCACTaGAATAGCAAATACGTTATT +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELQWALH*NSKYVI
Trigger: AATAACGTATTTGCTATTGCAGTGCAGAGCCCACTG...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTTGTTAGCAAAGTCCTaGTGGGATTCTACAAAGTTC +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSLLAKS*WDSTKF
Trigger: GAACTTTGTAGAATCCCACCAGGACTTTGCTAACAA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTAGACTTCTGTTTGTCTaGGAAATAGTCTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSRLLFV*EIVYQF
Trigger: GAACTGATAGACTATTTCTCAGACAAACAGAAGTCT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTCTCCAAAAACATACTaGAAACTCTCTTGCTATGAG +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNSPKTY*KLSCYE
Trigger: CTCATAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTATGTGGCACAATCTTaGTTAGTGTTAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSYVAQS*LVLKSV
Trigger: CACAGACTTTAACACTAAGCAAGATTGTGCCACATA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCTCTGCTCCCAATCATaGTTGTCATCAGATAATATT +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSLCSQS*LSSDNI
Trigger: AATATTATCTGATGACAAGCATGATTGGGAGCAGAG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCAAGATCTGTACTTGTaGTCAGAACTCTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVQDLYL*SELSWH
Trigger: ATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACCTAATCCTGTTTTTCTaGAATCTGCTACACCTCATA +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNLILFF*NLLHLI
Trigger: TATGAGGTGTAGCAGATTGCAGAAAAACAGGATTAG...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCTAATCCTGTTTTTCTaGAATCTGCTACACCTCATA +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSLILFF*NLLHLI
Trigger: TATGAGGTGTAGCAGATTGCAGAAAAACAGGATTAG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCAAAAGACCTGGTCCTaGTATATTTTGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVQKTWS*YILSQS
Trigger: GCTTTGGCTCAAAATATAGCAGGACCAGGTCTTTTG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACAAATTGTTGATCAAATaGAAAGGAGTCCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNKLLIK*KGVPCD
Trigger: GTCACAAGGGACTCCTTTCCATTTGATCAACAATTT...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATTATCAACAAAAGACCTaGTCCTGCTATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYYQQKT*SCYILS
Trigger: GCTCAAAATATAGCAGGACCAGGTCTTTTGTTGATA...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGATCTCCAAGTAAGTTaGATATATGTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNDLQVS*IYVAQS
Trigger: AGATTGTGCCACATATATGCAACTTACTTGGAGATC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCTAATCCTGTTTTTCTaGAATCTGCTACACCTCATA +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNLILFF*NLLHLI
Trigger: TATGAGGTGTAGCAGATTGCAGAAAAACAGGATTAG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGTTAAATCTTGCTGGTTaGTTTCTCAGAATTTCCCTC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVLNLAG*FLRISL
Trigger: GAGGGAAATTCTGAGAAATCAACCAGCAAGATTTAA...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGATCTCCAAGTAAGTTaGATATATGTGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVDLQVS*IYVAQS
Trigger: AGATTGTGCCACATATATGCAACTTACTTGGAGATC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGAATGTATTTCAGGATTaGAACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TKMVKMPFTRLTETMLELNVFQD*NFDLEV
Trigger: AACCTCAAGGTCAAAGTTGCAATCCTGAAATACATT...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGAAATTGTTGATCAAATaGAAAGGAGTCCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVKLLIK*KGVPCD
Trigger: GTCACAAGGGACTCCTTTCCATTTGATCAACAATTT...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGTTAGCAAAGTCCTGGTaGGATTCTACAAAGTTCTTA +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVLAKSW*DSTKFL
Trigger: TAAGAACTTTGTAGAATCCCACCAGGACTTTGCTAA...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CAA 72 bp TTCCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTaGCTTCCTTTACATTCAATACCAGTAAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: FLLFCMKTAIQA*LPLHSIPVRFY
Trigger: GTAGAATCTTACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGTCTAGTGAATGTGTCTaGCATTCTTGTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVSSECV*HSCKSK
Trigger: TTTGCTTTTACAAGAATGGCAGACACATTCACTAGA...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGGAGCAGCGGGGGTCTaGGGCCCTGGCCAGTCCGGT +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLGAAGV*GPGQSG
Trigger: ACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTCC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS GCA 90 bp CGGGTCACCAGGGCGGACAGGATGTCCATGCCCAGCAGAACCACCTaGAGCGGGAAACACCGGGAGCCTGTTAGCAGCCGGCCTGCGGGG +
Preference number: 5 (lower is better)
Translates to: RVTRADRMSMPSRTT*SGKHREPVSSRPAG
Trigger: CCCCGCAGGCCGGCTGCTAACAGGCTCCCGGTGTTTCCCGCTGCAGGTGGTTCTGCTGGGCATGGACATCCTGTCCGCCCTGGTGACCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485112.1
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGTGCCGATCTGCGCCTaGAACCGATCCTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLVPICA*NRSCSR
Trigger: CCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCAC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGGCACTCCCAGAGCTTaGCCGTCTTGTGCGGATCCG +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLGTPRA*PSCADP
Trigger: CGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTATGGGGCAGAGCACCTaGATGCACTGCTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLMGQST*MHCSGW
Trigger: CCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCAT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS TCA 90 bp AGTCTCGCGCCCGCGGCCCCGGGAAGGCGCGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTATCCAGAGCTGTCCGGCCTCCTTCTA +
Preference number: 5 (lower is better)
Translates to: SLAPAAPGRRAEAGC*VVRSCYPELSGLLL
Trigger: TAGAAGGAGGCCGGACAGCTCTGGATAACAAGACCTCACTACTCAACACCCAGCCTCCGCGCGCCTTCCCGGGGCCGCGGGCGCGAGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS GCA 90 bp GAGCAGGGCTTGTATCTCGGCTGCTCTCACGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGGGTCGAGGGATACGGCTGCTCCGTG +
Preference number: 5 (lower is better)
Translates to: EQGLYLGCSHGWYRG*TPDSCWVEGYGCSV
Trigger: CACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS GCA 90 bp GACCCCCATGGGAACAGTTGGTGGGTGAGGTCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGGGCGTCCGGCCAATCGTATTGCTTG +
Preference number: 5 (lower is better)
Translates to: DPHGNSWWVRSGGWS*CWCVGRASGQSYCL
Trigger: CAAGCAATACGATTGGCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CCA 90 bp GAGACAGACCCCCATGGGAACAGTTGGTGGGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTCGGGAGGGCGTCCGGCCAATCGTAT +
Preference number: 5 (lower is better)
Translates to: ETDPHGNSWWVRSGG*SCCWCVGRASGQSY
Trigger: ATACGATTGGCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGTCTGTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGCAGCAATGACTCCTTaGCGATCCTCTCGACGACTT +
Preference number: 5 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSAAMTP*RSSRRL
Trigger: AAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS CCA 90 bp GAGGAAAGCCCCGAGCAGGGCTTGTATCTCGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCTGACTCATGCTGGGTCGAGGGATAC +
Preference number: 5 (lower is better)
Translates to: EESPEQGLYLGCSHG*YRGCTPDSCWVEGY
Trigger: GTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCCCTGCTCGGGGCTTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 90 bp CATGGGAACAGTTGGTGGGTGAGGTCAGGGGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCCGGCCAATCGTATTGCTTGGAGAGC +
Preference number: 5 (lower is better)
Translates to: HGNSWWVRSGGWSCC*CVGRASGQSYCLES
Trigger: GCTCTCCAAGCAATACGATTGGCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGGCCAATCGTATTGCTaGGAGAGCCCACACTGGTGT +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLGQSYC*ESPHWC
Trigger: ACACCAGTGTGGGCTCTCCAAGCAATACGATTGGCC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTACTCGCTCATTGTGGTaGGACAGCTCTTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSTRSLW*DSSFRR
Trigger: CCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS TCA 90 bp CACAGCCTCTTTCAGGGCGGTCTTGTCGTAGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTAGTCTCGCGCCCGCGGCCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: HSLFQGGLVVGVDGI*VGVRVVVSRPRPRE
Trigger: TTCCCGGGGCCGCGGGCGCGAGACTACAACCCGTACCCCTACTCAGATGCCATCAACACCTACGACAAGACCGCCCTGAAAGAGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS GCA 90 bp CTCGGCTGCTCTCACGGCTGGTATCGCGGCTGCACCCCTGACTCATaGTGGGTCGAGGGATACGGCTGCTCCGTGCTAATCCTATTCGGT +
Preference number: 5 (lower is better)
Translates to: LGCSHGWYRGCTPDS*WVEGYGCSVLILFG
Trigger: ACCGAATAGGATTAGCACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS GCA 90 bp ACCGATCAAGTGGAGGAAAGCCCCGAGCAGGGCTTGTATCTCGGCTaGTCTCACGGCTGGTATCGCGGCTGCACCCCTGACTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: TDQVEESPEQGLYLG*SHGWYRGCTPDSCW
Trigger: CCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCCCTGCTCGGGGCTTTCCTCCACTTGATCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 90 bp CATAGTCCAGCATGCTTGGAGACAGACCCCCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGGTCCTGCTGCTGGTGTGTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: HSPACLETDPHGNSW*VRSGGWSCCWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGACGTATCTGGGAGGTaGCCTCTTTGTTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLDVSGR*PLCSLK
Trigger: CTTCAGCGAACAAAGAGGCAACCTCCCAGATACGTC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGCGAGTACGGAAATTCTaGTGTTTGAAGCCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRVRKF*CLKPPS
Trigger: GCTTGGAGGCTTCAAACACAAGAATTTCCGTACTCG...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTTTGCAGCTGAAGACTaGGATCCAAGGGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLFAAED*DPRVDE
Trigger: TTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCTTGAGGCATCACTGTaGGCATCATCGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLEASL*ASSSEY
Trigger: GTATTCTGACGATGATGCCAACAGTGATGCCTCAAG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTTTAGTAGCTTCATCTaGCTCCCTGTGAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: GRQQLGGSRESARPAPQWFSSFI*LPVSCA
Trigger: TGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGGAGCAGCGGGGGTCTaGGGCCCTGGCCAGTCCGGT +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQGAAGV*GPGQSG
Trigger: ACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTCC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGAGCAGCGGGGGTCTaGGGCCCTGGCCAGTCCGGT +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGAAGV*GPGQSG
Trigger: ACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTCC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGATGAGACAAAGTCAGTaGCATTACCTGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: GRQQLGGSRESARPAPQWMRQSQ*HYLHRV
Trigger: CACCCTGTGCAGGTAATGCAACTGACTTTGTCTCAT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS TCA 90 bp CTTGTATCTCGGCTGCTCTCACGGCTGGTATCGCGGCTGCACCCCTaGCTCATGCTGGGTCGAGGGATACGGCTGCTCCGTGCTAATCCT +
Preference number: 5 (lower is better)
Translates to: LVSRLLSRLVSRLHP*LMLGRGIRLLRANP
Trigger: AGGATTAGCACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS GCA 90 bp ATTAGACTTGGCAGCACTGTGCCGATCTGCGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCGGACAGGATGTCCATGCCCAGCAGA +
Preference number: 5 (lower is better)
Translates to: IRLGSTVPICALNRS*SRVTRADRMSMPSR
Trigger: TCTGCTGGGCATGGACATCCTGTCCGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCTGCCAAGTCTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000485112.1
ENST00000541377.5
CDS CCA 90 bp GGCTGCTCTCACGGCTGGTATCGCGGCTGCACCCCTGACTCATGCTaGGTCGAGGGATACGGCTGCTCCGTGCTAATCCTATTCGGTTTG +
Preference number: 5 (lower is better)
Translates to: GCSHGWYRGCTPDSC*VEGYGCSVLILFGL
Trigger: CAAACCGAATAGGATTAGCACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGTGCCGATCTGCGCCTaGAACCGATCCTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPVPICA*NRSCSR
Trigger: CCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCAC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGGAGCAGCGGGGGTCTaGGGCCCTGGCCAGTCCGGT +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLGAAGV*GPGQSG
Trigger: ACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTCC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS CCA 90 bp TATCATAGTCCAGCATGCTTGGAGACAGACCCCCATGGGAACAGTTaGTGGGTGAGGTCAGGGGGCTGGTCCTGCTGCTGGTGTGTCGGG +
Preference number: 5 (lower is better)
Translates to: YHSPACLETDPHGNS*WVRSGGWSCCWCVG
Trigger: CCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATGATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS-3UTR CAA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGTCGTTGACACAGATTaGGTACTAACTGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLVVDTD*VLTVEA
Trigger: AGCTTCTACAGTTAGTACCAAATCTGTGTCAACGAC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGAGGAGGAGCTGCTGTaGCTGTTGGTGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPEEELL*LLVVWA
Trigger: GGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: GRQQLGGSRESARPAPQWQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAGGGGAGGAAACAAGTaGGTGCTCAATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLRGGNK*VLNLNH
Trigger: GTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCTCTCTAGGCTTTTCTaGGCTCTTAATCCCACATTA +
Preference number: 5 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLSRLF*ALNPTL
Trigger: TAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS TCA 90 bp CGTCATCGAACACAGCCTCTTTCAGGGCGGTCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGTACGGGTTGTAGTCTCGCGCCCGCG +
Preference number: 5 (lower is better)
Translates to: RHRTQPLSGRSCRRC*WHLSRGTGCSLAPA
Trigger: CGCGGGCGCGAGACTACAACCCGTACCCCTACTCAGATGCCATCAACACCTACGACAAGACCGCCCTGAAAGAGGCTGTGTTCGATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGTGCCGATCTGCGCCTaGAACCGATCCTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVVPICA*NRSCSR
Trigger: CCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCAC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGCACTCCCAGAGCTTaGCCGTCTTGTGCGGATCCG +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGTPRA*PSCADP
Trigger: CGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGCACTCCCAGAGCTTaGCCGTCTTGTGCGGATCCG +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGTPRA*PSCADP
Trigger: CGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGTGCCGATCTGCGCCTaGAACCGATCCTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLVPICA*NRSCSR
Trigger: CCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCAC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: GRQQLGGSRESARPAPQWICGTI*LSVKVC
Trigger: ACAGACTTTAACACTAAGCAAGATTGTGCCACATAT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTTCTGGCTTCTATTCTaGCTTCGGAATCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLFWLLF*LRNQHH
Trigger: ATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACAGAGCTTTGCCGTCTaGTGCGGATCCGACCTAAGG +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPQSFAV*CGSDLR
Trigger: CCTTAGGTCGGATCCGCACAAGACGGCAAAGCTCTG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263710.8
ENST00000409078.8
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGCACTCCCAGAGCTTaGCCGTCTTGTGCGGATCCG +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGTPRA*PSCADP
Trigger: CGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGAGCTGCTGTTGCTGTaGGTGGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGAGGAGGAGCTGCTGTaGCTGTTGGTGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQREEELL*LLVVWA
Trigger: GGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS CCA 90 bp CAGCTGAAGACTTGGATCCAAGGGTGGATGAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTCTCCGAGAACTTGGTGGAGCCTTGG +
Preference number: 5 (lower is better)
Translates to: QLKTWIQGWMNQAGG*FPFQRFSENLVEPW
Trigger: CCAAGGCTCCACCAAGTTCTCGGAGAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGTCTTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000418989.5
ENST00000430234.5
ENST00000449975.1
ENST00000452274.6
ENST00000455322.6
ENST00000474065.5
ENST00000480007.1
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGGCACTCCCAGAGCTTaGCCGTCTTGTGCGGATCCG +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLGTPRA*PSCADP
Trigger: CGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGGVEAT*VALPEL
Trigger: AAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGVEAT*VALPEL
Trigger: AAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTCCGGCCAATCGTATaGCTTGGAGAGCCCACACTG +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVRPIV*LGEPTL
Trigger: CAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAATGGGGCAGAGCACCTaGATGCACTGCTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVMGQST*MHCSGW
Trigger: CCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCAT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGAGCTGCTGTTGCTGTaGGTGGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACAGAGCTTTGCCGTCTaGTGCGGATCCGACCCTCCG +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTQSFAV*CGSDPP
Trigger: CGGAGGGTCGGATCCGCACAAGACGGCAAAGCTCTG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000455322.6
CDS GCA 90 bp TCTATCAGTTCTTGGCCAACCTGCAATCGTTTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAGGACTCCATGCGAGGCTCCATAGTG +
Preference number: 5 (lower is better)
Translates to: SISSWPTCNRFPTSF*NTCARQDSMRGSIV
Trigger: CACTATGGAGCCTCGCATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAAACGATTGCAGGTTGGCCAAGAACTGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGCCAATCGTATTGCTaGGAGAGCCCACACTGGTGT +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGQSYC*ESPHWC
Trigger: ACACCAGTGTGGGCTCTCCAAGCAATACGATTGGCC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGTCCGGCCAATCGTATaGCTTGGAGAGCCCACACTG +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQVRPIV*LGEPTL
Trigger: CAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGAC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGAACCCCATAACCGACTaGGAGACAGACCCCCATGGG +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGNPITD*ETDPHG
Trigger: CCCATGGGGGTCTGTCTCCAAGTCGGTTATGGGGTT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACGCGGAGGCTGGGTGTaGAGTAGTGAGGTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGERGGWV*SSEVLL
Trigger: TAACAAGACCTCACTACTCAACACCCAGCCTCCGCG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATCCTCCACTCGCTCATaGTGGTTGGACAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSSTRS*WLDSSF
Trigger: GAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGAGCTGCTGTTGCTGTaGGTGGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGAGCTGCTGTTGCTGTaGGTGGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGAGGAGGAGCTGCTGTaGCTGTTGGTGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQEEELL*LLVVWA
Trigger: GGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGTGTTCTGTTTTTCATaGGAACAGGGGCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPVFCFS*EQGPCR
Trigger: CCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACAC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTATTTCCAAACATTATaGTTAGCAAAGTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLYFQTL*LAKSWW
Trigger: CCACCAGGACTTTGCTAACAATAATGTTTGGAAATA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCAGAGCTTTGCCGTCTaGTGCGGATCCGACCTGAGT +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVQSFAV*CGSDLS
Trigger: ACTCAGGTCGGATCCGCACAAGACGGCAAAGCTCTG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS TCA 90 bp TGGAGGCAAAGCTGCTGCAGAGCTGAAAGGCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGCACTGGCTGCTGCGTTCACATCAAT +
Preference number: 5 (lower is better)
Translates to: WRQSCCRAERRRARR*GDFGFGTGCCVHIN
Trigger: ATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS GCA 90 bp ATAATTCAGCAGTCCATTAGCCCTGTTTTTCGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGCCTTCTCCTCCACCCCAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: IIQQSISPVFRYCCR*GPESRRLLLHPNEV
Trigger: AACCTCATTGGGGTGGAGGAGAAGGCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAACAGGGCTAATGGACTGCTGAATTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS GCA 90 bp TCTTGGCCAACCTGCAATCGTTTCCCCACATCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATGCGAGGCTCCATAGTGGAATTCAAA +
Preference number: 5 (lower is better)
Translates to: SWPTCNRFPTSFCNT*ARQDSMRGSIVEFK
Trigger: TTTGAATTCCACTATGGAGCCTCGCATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAAACGATTGCAGGTTGGCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS GCA 90 bp CTTGAGAGCTGGAAGATGAGCGGTCTGACTGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGTGGGACTGCAGGGCTTTCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: LESWKMSGLTEAETL*CLSSSGGTAGLSGR
Trigger: CCTACCAGAAAGCCCTGCAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATCTTCCAGCTCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 90 bp TGTGCTCAGAACTCTCATGGCATTCACAGAACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCGATCAAGTGGAGGAAAGCCCCGAGC +
Preference number: 5 (lower is better)
Translates to: CAQNSHGIHRTRYSS*LAKPKPIKWRKAPS
Trigger: GCTCGGGGCTTTCCTCCACTTGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGTTCTGTGAATGCCATGAGAGTTCTGAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 90 bp CATTTCCGGCCCAGACGCAGTCCGAGAGTCCAGACGCATGCCGACTaGAGGACCAAAGAGATTAGCACGAAGAAGGATGATCTTCCACAA +
Preference number: 5 (lower is better)
Translates to: HFRPRRSPRVQTHAD*RTKEISTKKDDLPQ
Trigger: TTGTGGAAGATCATCCTTCTTCGTGCTAATCTCTTTGGTCCTCCAGTCGGCATGCGTCTGGACTCTCGGACTGCGTCTGGGCCGGAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485112.1
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACGTTTCTCCGAGAACTaGGTGGAGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGERFSEN*VEPWMM
Trigger: CATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQGVEAT*VALPEL
Trigger: AAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATGGTTGTGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCACAACCA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGGCCAATCGTATTGCTaGGAGAGCCCACACTGGTGT +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQGQSYC*ESPHWC
Trigger: ACACCAGTGTGGGCTCTCCAAGCAATACGATTGGCC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGCCAATCGTATTGCTaGGAGAGCCCACACTGGTGT +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGQSYC*ESPHWC
Trigger: ACACCAGTGTGGGCTCTCCAAGCAATACGATTGGCC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCGCGGAGGCTGGGTGTaGAGTAGTGAGGTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGRGGWV*SSEVLL
Trigger: TAACAAGACCTCACTACTCAACACCCAGCCTCCGCG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCAGCAATGACTCCTTaGCGATCCTCTCGACGACTT +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEAAMTP*RSSRRL
Trigger: AAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCTGGGGTAGGGACCTaGTCGGTGGAGTCGATTAGG +
Preference number: 5 (lower is better)
Translates to: IRESWKETVRVHSQFYAESGVGT*SVESIR
Trigger: CCTAATCGACTCCACCGACAAGGTCCCTACCCCAGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATCTGGGGTAGGGACCTaGTCGGTGGAGTCGATTAGG +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSGVGT*SVESIR
Trigger: CCTAATCGACTCCACCGACAAGGTCCCTACCCCAGA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGTAATACCCAACCCCTaGAAACGCGTCCCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPVIPNP*KRVPQV
Trigger: AACTTGAGGGACGCGTTTCAAGGGGTTGGGTATTAC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTGTTCTGTTTTTCATaGGAACAGGGGCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVFCFS*EQGPCR
Trigger: CCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGCACACACAGTGTACTaGAAGGAAGCTGCGTGCCCC +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVAHTVY*KEAACP
Trigger: GGGGCACGCAGCTTCCTTCAAGTACACTGTGTGTGC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCATAGTCCAGCATGCTaGGAGACAGACCCCCATGGG +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLHSPAC*ETDPHG
Trigger: CCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS TCA 90 bp ACCCTGCAGCAAGCCTGGGATGATGTCGACAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTCGACGACTTTGGTCTGCATCTTGAT +
Preference number: 5 (lower is better)
Translates to: TLQQAWDDVDKELQQ*LLCDPLDDFGLHLD
Trigger: ATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 90 bp ATCCTATTCGGTTTGGACTTGTTTCCCGGCTACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTTCTGAAGACGGTGTCACAGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ILFGLDLFPGYIPGS*ESCFAFLKTVSQVG
Trigger: GCCCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTGTTTTTCGTTACTGTaGCCGCTGCGGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGCFSLL*PLRTRE
Trigger: CTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAACA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTGTTTTTCGTTACTGTaGCCGCTGCGGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQCFSLL*PLRTRE
Trigger: CTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAACA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGACGTATCTGGGAGGTaGCCTCTTTGTTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYADVSGR*PLCSLK
Trigger: CTTCAGCGAACAAAGAGGCAACCTCCCAGATACGTC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGTGCCGATCTGCGCCTaGAACCGATCCTGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLVPICA*NRSCSR
Trigger: CCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCAC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGTCTGTCTATTAGACTaGGCAGCACTGTGCCGATCT +
Preference number: 5 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIVCLLD*AALCRS
Trigger: AGATCGGCACAGTGCTGCCAAGTCTAATAGACAGAC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTCTGTCTATTAGACTaGGCAGCACTGTGCCGATCT +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVCLLD*AALCRS
Trigger: AGATCGGCACAGTGCTGCCAAGTCTAATAGACAGAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACCACTAAGCTGTTTATaGCTGCATCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKPLSCL*LHLEPG
Trigger: GCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGAACTTGGTGGAGCCTaGGATGATGTAGAACTAGCA +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPELGGA*DDVELA
Trigger: TGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCGTTTCTCCGAGAACTaGGTGGAGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVRFSEN*VEPWMM
Trigger: CATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACACCAGCTCCTTCTTTaGCAGCTGAAGACTTGGATC +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEHQLLL*QLKTWI
Trigger: GATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACACCAGCTCCTTCTTTaGCAGCTGAAGACTTGGATC +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKHQLLL*QLKTWI
Trigger: GATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATACTATTCGGTTTGGACTaGTTTCCCGGCTACATCCCT +
Preference number: 5 (lower is better)
Translates to: HPASAFSPSSCSGLCTAILFGLD*FPGYIP
Trigger: AGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAG...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACTATTCGGTTTGGACTaGTTTCCCGGCTACATCCCT +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKLFGLD*FPGYIP
Trigger: AGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTATTCGGTTTGGACTaGTTTCCCGGCTACATCCCT +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGELFGLD*FPGYIP
Trigger: AGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTAGCCCCGAGCAGGGCTaGTATCTCGGCTGCTCTCAC +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTSPEQG*YLGCSH
Trigger: GTGAGAGCAGCCGAGATACAAGCCCTGCTCGGGGCT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGCTCAGAGCAAACACTaGAGGCATCACTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKAQSKH*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTGGTTGTGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCACAACCA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGTTGTGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCACAACCA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGTCCGGCCAATCGTATaGCTTGGAGAGCCCACACTG +
Preference number: 5 (lower is better)
Translates to: VDREAETGLGALLFCVLFVRPIV*LGEPTL
Trigger: CAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGAC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACGCGGAGGCTGGGTGTaGAGTAGTGAGGTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: IRESWKETVRVHSQFYAERGGWV*SSEVLL
Trigger: TAACAAGACCTCACTACTCAACACCCAGCCTCCGCG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACGCGGAGGCTGGGTGTaGAGTAGTGAGGTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVRGGWV*SSEVLL
Trigger: TAACAAGACCTCACTACTCAACACCCAGCCTCCGCG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACTCGCTCATTGTGGTaGGACAGCTCTTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTRSLW*DSSFRR
Trigger: CCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCTCCACTCGCTCATaGTGGTTGGACAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSSTRS*WLDSSF
Trigger: GAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAAGGAGCAGAATGGTCTaGAAGTGCTCCTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYARSRMV*KCSSQT
Trigger: TGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCCT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGAGGAGCAGAATGGTCTaGAAGTGCTCCTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGRSRMV*KCSSQT
Trigger: TGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCCT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACGAATTGAATGGTCTTaGTCTCCAAGGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGERIEWS*SPRVSS
Trigger: GCTGGAGACCCTTGGAGACAAAGACCATTCAATTCG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAACTTTGGTCTGCATCTaGATGGCAGCAAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPTLVCI*MAARLM
Trigger: CATCAACCTTGCTGCCATCAAGATGCAGACCAAAGT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCAGCAATGACTCCTTaGCGATCCTCTCGACGACTT +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGAAMTP*RSSRRL
Trigger: AAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 5 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGTGTTCTGTTTTTCATaGGAACAGGGGCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGVFCFS*EQGPCR
Trigger: CCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACAC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGCACACACAGTGTACTaGAAGGAAGCTGCGTGCCCC +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQAHTVY*KEAACP
Trigger: GGGGCACGCAGCTTCCTTCAAGTACACTGTGTGTGC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAATGAGACAAAGTCAGTaGCATTACCTGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPMRQSQ*HYLHRV
Trigger: CACCCTGTGCAGGTAATGCAACTGACTTTGTCTCAT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCTCACAGGCTTCTTCTaGCTCCTGGAGTCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGLTGFF*LLESPN
Trigger: GTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGAG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS CCA 90 bp CTACATCCTCAGTCTGCCGCAGATAATGGGGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAGAGCAAACACTTGAGGCATCACTGT +
Preference number: 5 (lower is better)
Translates to: LHPQSAADNGECHHS*SHMSAQSKHLRHHC
Trigger: ACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTGAGGATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTGTTTTTCGTTACTGTaGCCGCTGCGGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLCFSLL*PLRTRE
Trigger: CTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAACA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGACGTATCTGGGAGGTaGCCTCTTTGTTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVDVSGR*PLCSLK
Trigger: CTTCAGCGAACAAAGAGGCAACCTCCCAGATACGTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCTCGAACCTGGCTGTTaGGATCTCCAAGTAAGTTGC +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRLEPGC*DLQVSC
Trigger: GCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCTCGAACCTGGCTGTTaGGATCTCCAAGTAAGTTGC +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQLEPGC*DLQVSC
Trigger: GCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATTTGCAGCTGAAGACTaGGATCCAAGGGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKFAAED*DPRVDE
Trigger: TTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCTATTCGGTTTGGACTaGTTTCCCGGCTACATCCCT +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQLFGLD*FPGYIP
Trigger: AGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTAATCCTATTCGGTTaGGACTTGTTTCCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGELILFG*DLFPGY
Trigger: GTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTTGAGGCATCACTGTaGGCATCATCGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGELEASL*ASSSEY
Trigger: GTATTCTGACGATGATGCCAACAGTGATGCCTCAAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGCTCAGAGCAAACACTaGAGGCATCACTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRAQSKH*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGAACTAGCACAGTGGTaGAGAACTTCTGCTACATCC +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKELAQW*RTSATS
Trigger: GGATGTAGCAGAAGTTCTCAACCACTGTGCTAGTTC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGCGCGGAGGCTGGGTGTaGAGTAGTGAGGTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQRGGWV*SSEVLL
Trigger: TAACAAGACCTCACTACTCAACACCCAGCCTCCGCG...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTCCTCCACTCGCTCATaGTGGTTGGACAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLSSTRS*WLDSSF
Trigger: GAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAGGAGCAGAATGGTCTaGAAGTGCTCCTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVRSRMV*KCSSQT
Trigger: TGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCCT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGGAGCAGAATGGTCTaGAAGTGCTCCTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRSRMV*KCSSQT
Trigger: TGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCCT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCGAATTGAATGGTCTTaGTCTCCAAGGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGRIEWS*SPRVSS
Trigger: GCTGGAGACCCTTGGAGACAAAGACCATTCAATTCG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAATGGGGCAGAGCACCTaGATGCACTGCTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEMGQST*MHCSGW
Trigger: CCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCAT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGATCCTCTCGACGACTTaGGTCTGCATCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQILSTT*VCILMA
Trigger: TGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGAT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGCAGCAATGACTCCTTaGCGATCCTCTCGACGACTT +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLAAMTP*RSSRRL
Trigger: AAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGCAGCAATGACTCCTTaGCGATCCTCTCGACGACTT +
Preference number: 5 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRAAMTP*RSSRRL
Trigger: AAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATTTAGTAGCTTCATCTaGCTCCCTGTGAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEFSSFI*LPVSCA
Trigger: TGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGAGGAGGAGCTGCTGTaGCTGTTGGTGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEEEELL*LLVVWA
Trigger: GGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGAGGAGGAGCTGCTGTaGCTGTTGGTGGTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLEEELL*LLVVWA
Trigger: GGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 5 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGTAATACCCAACCCCTaGAAACGCGTCCCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAVIPNP*KRVPQV
Trigger: AACTTGAGGGACGCGTTTCAAGGGGTTGGGTATTAC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGTAATACCCAACCCCTaGAAACGCGTCCCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVVIPNP*KRVPQV
Trigger: AACTTGAGGGACGCGTTTCAAGGGGTTGGGTATTAC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACTCACAGGCTTCTTCTaGCTCCTGGAGTCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVLTGFF*LLESPN
Trigger: GTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGAG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS TCA 90 bp TGGAATTCAAATCCAGATCCAGCAAAAGCTAGAGGGCAGTCACGATaGCTCCCTCCCAGCAGACGTATCTGGGAGGTTGCCTCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: WNSNPDPAKARGQSR*LPPSRRIWEVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGGAGGGAGTCATCGTGACTGCCCTCTAGCTTTTGCTGGATCTGGATTTGAATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS GCA 90 bp ACAGGTACTGCCATTAGCTGTGCGTGGAGACATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCTGGGCCCTCTTTATGTATAAGTTTA +
Preference number: 5 (lower is better)
Translates to: TGTAISCAWRHRRRS*CCCWWSGPSLCISL
Trigger: TAAACTTATACATAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGCAGTACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 90 bp CGTGCTAATCCTATTCGGTTTGGACTTGTTTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTTCGCTTTTCTGAAGACGGTGTCACA +
Preference number: 5 (lower is better)
Translates to: RANPIRFGLVSRLHP*LLGILLRFSEDGVT
Trigger: TGTGACACCGTCTTCAGAAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTGTTTTTCGTTACTGTaGCCGCTGCGGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQCFSLL*PLRTRE
Trigger: CTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAACA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCGAGTACGGAAATTCTaGTGTTTGAAGCCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVRVRKF*CLKPPS
Trigger: GCTTGGAGGCTTCAAACACAAGAATTTCCGTACTCG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATGTGCTCCAGAGGCATaGAGTGTTGCTATAAGGCAG +
Preference number: 5 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVCAPEA*SVAIRQ
Trigger: CTGCCTTATAGCAACACTCAATGCCTCTGGAGCACA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCTCGAACCTGGCTGTTaGGATCTCCAAGTAAGTTGC +
Preference number: 5 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLEPGC*DLQVSC
Trigger: GCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACCACTAAGCTGTTTATaGCTGCATCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTPLSCL*LHLEPG
Trigger: GCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCCACTAAGCTGTTTATaGCTGCATCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLPLSCL*LHLEPG
Trigger: GCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGAACTTGGTGGAGCCTaGGATGATGTAGAACTAGCA +
Preference number: 5 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQELGGA*DDVELA
Trigger: TGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTTTGCAGCTGAAGACTaGGATCCAAGGGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVFAAED*DPRVDE
Trigger: TTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGTCGTTGACACAGATTaGGTACTAACTGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPVVDTD*VLTVEA
Trigger: AGCTTCTACAGTTAGTACCAAATCTGTGTCAACGAC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEGVEAT*VALPEL
Trigger: AAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACTAATCCTATTCGGTTaGGACTTGTTTCCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYALILFG*DLFPGY
Trigger: GTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCTAATCCTATTCGGTTaGGACTTGTTTCCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLILFG*DLFPGY
Trigger: GTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCTTGAGGCATCACTGTaGGCATCATCGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLEASL*ASSSEY
Trigger: GTATTCTGACGATGATGCCAACAGTGATGCCTCAAG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTAGCACAGTGGTaGAGAACTTCTGCTACATCC +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGELAQW*RTSATS
Trigger: GGATGTAGCAGAAGTTCTCAACCACTGTGCTAGTTC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTGGTTGTGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: VDREAETGLGALLFCVLFWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCACAACCA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAACTCGCTCATTGTGGTaGGACAGCTCTTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVTRSLW*DSSFRR
Trigger: CCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACGAATTGAATGGTCTTaGTCTCCAAGGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRIEWS*SPRVSS
Trigger: GCTGGAGACCCTTGGAGACAAAGACCATTCAATTCG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACGAATTGAATGGTCTTaGTCTCCAAGGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVRIEWS*SPRVSS
Trigger: GCTGGAGACCCTTGGAGACAAAGACCATTCAATTCG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGACGCCAGTGCTCGAATaGAATGGTCTTTGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQTPVLE*NGLCLQ
Trigger: TTGGAGACAAAGACCATTCAATTCGAGCACTGGCGT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATATGGGGCAGAGCACCTaGATGCACTGCTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADMGQST*MHCSGW
Trigger: CCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCAT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGACTTTGGTCTGCATCTaGATGGCAGCAAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGTLVCI*MAARLM
Trigger: CATCAACCTTGCTGCCATCAAGATGCAGACCAAAGT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAATCCTCTCGACGACTTaGGTCTGCATCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTILSTT*VCILMA
Trigger: TGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGAT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAGGGGAGGAAACAAGTaGGTGCTCAATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQRGGNK*VLNLNH
Trigger: GTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGGCTTAGGCAGAACTTaGAGGGGAGGAAACAAGTTG +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLGLGRT*RGGNKL
Trigger: CAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGGCTTAGGCAGAACTTaGAGGGGAGGAAACAAGTTG +
Preference number: 5 (lower is better)
Translates to: IRESWKETVRVHSQFYAEGLGRT*RGGNKL
Trigger: CAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGCACACACAGTGTACTaGAAGGAAGCTGCGTGCCCC +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGAHTVY*KEAACP
Trigger: GGGGCACGCAGCTTCCTTCAAGTACACTGTGTGTGC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTATGAGACAAAGTCAGTaGCATTACCTGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRMRQSQ*HYLHRV
Trigger: CACCCTGTGCAGGTAATGCAACTGACTTTGTCTCAT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS TCA 90 bp ACTCCCTCCCAGCAGACGTATCTGGGAGGTTGCCTCTTTGTTCGCTaGAGGTTACTAAGAGCCTGTGTTTCAAAGATGCAATCTGGGGAA +
Preference number: 5 (lower is better)
Translates to: TPSQQTYLGGCLFVR*RLLRACVSKMQSGE
Trigger: TTCCCCAGATTGCATCTTTGAAACACAGGCTCTTAGTAACCTTCAGCGAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGGAGGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS GCA 90 bp CAGGGCTTTCTGGTAGGAGGACTCCAAGGTGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACTGTGGAAACCCCAGTAACATTTTCT +
Preference number: 5 (lower is better)
Translates to: QGFLVGGLQGVVQVL*FSAEVTVETPVTFS
Trigger: AGAAAATGTTACTGGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTCCTACCAGAAAGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 90 bp CAGCAACAGCAGCTTCAAGATCTGTACTTGTGCTCAGAACTCTCATaGCATTCACAGAACCAGGTATTCTTCCTGGCTGGCCAAGCCCAA +
Preference number: 5 (lower is better)
Translates to: QQQQLQDLYLCSELS*HSQNQVFFLAGQAQ
Trigger: TTGGGCTTGGCCAGCCAGGAAGAATACCTGGTTCTGTGAATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTGAAGCTGCTGTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CCA 90 bp TGGAGCCATATGAGCGCTCAGAGCAAACACTTGAGGCATCACTGTTaGCATCATCGTCAGAATACATCCCATACGGCTCATATCTCCTCC +
Preference number: 5 (lower is better)
Translates to: WSHMSAQSKHLRHHC*HHRQNTSHTAHISS
Trigger: GGAGGAGATATGAGCCGTATGGGATGTATTCTGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCATATGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CCA 90 bp CGATCTAATCCTATTCGGTTTGGACTTGTTTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTTCGCTTTTCTGAAGACGGTGTCACA +
Preference number: 5 (lower is better)
Translates to: RSNPIRFGLVSRLHP*LLGILLRFSEDGVT
Trigger: TGTGACACCGTCTTCAGAAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CCA 90 bp GTACGAGTCTGCAGATTCTTTCTCAGTGGTGAGGCATTCTCACTGTaGTCACATTACCCACGACCTGGCAAGCCTGAACAACTAGGTATG +
Preference number: 5 (lower is better)
Translates to: VRVCRFFLSGEAFSL*SHYPRPGKPEQLGM
Trigger: CATACCTAGTTGTTCAGGCTTGCCAGGTCGTGGGTAATGTGACCACAGTGAGAATGCCTCACCACTGAGAAAGAATCTGCAGACTCGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480007.1
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAATAGTCTATCAGTTCTaGGCCAACCTGCAATCGTTT +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKIVYQF*ANLQSF
Trigger: AAACGATTGCAGGTTGGCCAAGAACTGATAGACTAT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACGAGTACGGAAATTCTaGTGTTTGAAGCCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRVRKF*CLKPPS
Trigger: GCTTGGAGGCTTCAAACACAAGAATTTCCGTACTCG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTGTGCTCCAGAGGCATaGAGTGTTGCTATAAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQCAPEA*SVAIRQ
Trigger: CTGCCTTATAGCAACACTCAATGCCTCTGGAGCACA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTTGCAGCTGAAGACTaGGATCCAAGGGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTFAAED*DPRVDE
Trigger: TTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCACCAGCTCCTTCTTTaGCAGCTGAAGACTTGGATC +
Preference number: 5 (lower is better)
Translates to: VDREAETGLGALLFCVLFHQLLL*QLKTWI
Trigger: GATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATTCTGGCTTCTATTCTaGCTTCGGAATCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKFWLLF*LRNQHH
Trigger: ATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGTCGTTGACACAGATTaGGTACTAACTGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEVVDTD*VLTVEA
Trigger: AGCTTCTACAGTTAGTACCAAATCTGTGTCAACGAC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGGCACTCCCAGAGCTTaGCCGTCTTGTGCGGATCCG +
Preference number: 5 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTGTPRA*PSCADP
Trigger: CGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVGVEAT*VALPEL
Trigger: AAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACTAATCCTATTCGGTTaGGACTTGTTTCCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: IRESWKETVRVHSQFYAELILFG*DLFPGY
Trigger: GTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACTAATCCTATTCGGTTaGGACTTGTTTCCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLILFG*DLFPGY
Trigger: GTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCTAATCCTATTCGGTTaGGACTTGTTTCCCGGCTAC +
Preference number: 5 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLILFG*DLFPGY
Trigger: GTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGAACTAGCACAGTGGTaGAGAACTTCTGCTACATCC +
Preference number: 5 (lower is better)
Translates to: IRESWKETVRVHSQFYAEELAQW*RTSATS
Trigger: GGATGTAGCAGAAGTTCTCAACCACTGTGCTAGTTC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATTCAGGATTGCAACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGEFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGGCCAATCGTATTGCTaGGAGAGCCCACACTGGTGT +
Preference number: 5 (lower is better)
Translates to: DVIVSLSQETEDWASDIQGQSYC*ESPHWC
Trigger: ACACCAGTGTGGGCTCTCCAAGCAATACGATTGGCC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGTCCGGCCAATCGTATaGCTTGGAGAGCCCACACTG +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLVRPIV*LGEPTL
Trigger: CAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGAC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAATATCACACTCCTTTTaGCCATCTCGTTTAATTGGC +
Preference number: 5 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPISHSF*PSRLIG
Trigger: GCCAATTAAACGAGATGGCAAAAAGGAGTGTGATAT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCGAATTGAATGGTCTTaGTCTCCAAGGGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: VDREAETGLGALLFCVLFRIEWS*SPRVSS
Trigger: GCTGGAGACCCTTGGAGACAAAGACCATTCAATTCG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAACGCCAGTGCTCGAATaGAATGGTCTTTGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVTPVLE*NGLCLQ
Trigger: TTGGAGACAAAGACCATTCAATTCGAGCACTGGCGT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAACGCCAGTGCTCGAATaGAATGGTCTTTGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTTPVLE*NGLCLQ
Trigger: TTGGAGACAAAGACCATTCAATTCGAGCACTGGCGT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGATCCTCTCGACGACTTaGGTCTGCATCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQILSTT*VCILMA
Trigger: TGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGAT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTTTAGTAGCTTCATCTaGCTCCCTGTGAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLFSSFI*LPVSCA
Trigger: TGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATTTAGTAGCTTCATCTaGCTCCCTGTGAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: IRESWKETVRVHSQFYAEFSSFI*LPVSCA
Trigger: TGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAGGGGAGGAAACAAGTaGGTGCTCAATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVRGGNK*VLNLNH
Trigger: GTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGTCCTGCTATATTTaGAGCCAAAGCTCGTCAGTA +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRWSCYI*SQSSSV
Trigger: TACTGACGAGCTTTGGCTCAAAATATAGCAGGACCA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTGGTCCTGCTATATTTaGAGCCAAAGCTCGTCAGTA +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQWSCYI*SQSSSV
Trigger: TACTGACGAGCTTTGGCTCAAAATATAGCAGGACCA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAATGAGACAAAGTCAGTaGCATTACCTGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTMRQSQ*HYLHRV
Trigger: CACCCTGTGCAGGTAATGCAACTGACTTTGTCTCAT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS TCA 90 bp GGTTCCCATTCCAACGTTTCTCCGAGAACTTGGTGGAGCCTTGGATaGTGTAGAACTAGCAGAGGAAGGTCTGTTACCATCCACAGAATC +
Preference number: 5 (lower is better)
Translates to: GSHSNVSPRTWWSLG*CRTSRGRSVTIHRI
Trigger: GATTCTGTGGATGGTAACAGACCTTCCTCTGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACGTTGGAATGGGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000418989.5
ENST00000430234.5
ENST00000449975.1
ENST00000452274.6
ENST00000455322.6
ENST00000474065.5
ENST00000480007.1
ENST00000541377.5
CDS TCA 90 bp GGTAGGAGGACTCCAAGGTGTGGTACAAGTGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCCAGTAACATTTTCTGGCTTCTATTC +
Preference number: 5 (lower is better)
Translates to: GRRTPRCGTSALLLC*SDCGNPSNIFWLLF
Trigger: GAATAGAAGCCAGAAAATGTTACTGGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTGTTTTTCGTTACTGTaGCCGCTGCGGACCAGAGAG +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGCFSLL*PLRTRE
Trigger: CTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAACA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGATAGTCTATCAGTTCTaGGCCAACCTGCAATCGTTT +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGIVYQF*ANLQSF
Trigger: AAACGATTGCAGGTTGGCCAAGAACTGATAGACTAT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGATCTCCAAGTAAGTaGCATATATGTGGCACAATC +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGSPSK*HICGTI
Trigger: GATTGTGCCACATATATGCAACTTACTTGGAGATCC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCGTTTCTCCGAGAACTaGGTGGAGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGRFSEN*VEPWMM
Trigger: CATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCGTTTCTCCGAGAACTaGGTGGAGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTRFSEN*VEPWMM
Trigger: CATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGCTCCCAATCATGCTaGTCATCAGATAATATTTCC +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKCSQSC*SSDNIS
Trigger: GGAAATATTATCTGATGACAAGCATGATTGGGAGCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGACTTAGAGGTACAGTaGCTTGTTATGACAGGTATT +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKDLEVQ*LVMTGI
Trigger: AATACCTGTCATAACAAGCAACTGTACCTCTAAGTC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTCTGGCTTCTATTCTaGCTTCGGAATCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQFWLLF*LRNQHH
Trigger: ATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTCTGGCTTCTATTCTaGCTTCGGAATCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGFWLLF*LRNQHH
Trigger: ATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCAGAGCTTTGCCGTCTaGTGCGGATCCGACCTAAGG +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADQSFAV*CGSDLR
Trigger: CCTTAGGTCGGATCCGCACAAGACGGCAAAGCTCTG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000409078.8
ENST00000452274.6
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGCTTGAGGCATCACTGTaGGCATCATCGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQLEASL*ASSSEY
Trigger: GTATTCTGACGATGATGCCAACAGTGATGCCTCAAG...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGAACTAGCACAGTGGTaGAGAACTTCTGCTACATCC +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQELAQW*RTSATS
Trigger: GGATGTAGCAGAAGTTCTCAACCACTGTGCTAGTTC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTATGGGGCAGAGCACCTaGATGCACTGCTCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSMGQST*MHCSGW
Trigger: CCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCAT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAGCTGCTGTTGCTGTaGGTGGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATGTTCTTGCCAAGACTaGATTCCCATTTTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGECSCQD*IPIFSR
Trigger: CCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTCTGGGGTAGGGACCTaGTCGGTGGAGTCGATTAGG +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADSGVGT*SVESIR
Trigger: CCTAATCGACTCCACCGACAAGGTCCCTACCCCAGA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGAGGGGAGGAAACAAGTaGGTGCTCAATCTGAATCAC +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQRGGNK*VLNLNH
Trigger: GTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACTCTCTAGGCTTTTCTaGGCTCTTAATCCCACATTA +
Preference number: 5 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYALSRLF*ALNPTL
Trigger: TAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTGGTCCTGCTATATTTaGAGCCAAAGCTCGTCAGTA +
Preference number: 5 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRWSCYI*SQSSSV
Trigger: TACTGACGAGCTTTGGCTCAAAATATAGCAGGACCA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATGGTCCTGCTATATTTaGAGCCAAAGCTCGTCAGTA +
Preference number: 5 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVWSCYI*SQSSSV
Trigger: TACTGACGAGCTTTGGCTCAAAATATAGCAGGACCA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGTGTTCTGTTTTTCATaGGAACAGGGGCCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTVFCFS*EQGPCR
Trigger: CCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACAC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGCACACACAGTGTACTaGAAGGAAGCTGCGTGCCCC +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVAHTVY*KEAACP
Trigger: GGGGCACGCAGCTTCCTTCAAGTACACTGTGTGTGC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAGTGTAACATTACGCTaGATAAATAAAGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISVTLR*INKGWQ
Trigger: CTGCCACCCTTTATTTATCAAGCGTAATGTTACACT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCTCACAGGCTTCTTCTaGCTCCTGGAGTCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGLTGFF*LLESPN
Trigger: GTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGAG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000409078.8
CDS TCA 90 bp TTATCCCTAAACCAAACCATTAATCCAAAGCATCAGAAAGCTATCTaGGTCACCACGGCATGGCATGCAGCAGCCTCCCTGTCACTCAGT +
Preference number: 5 (lower is better)
Translates to: LSLNQTINPKHQKAI*VTTAWHAAASLSLS
Trigger: ACTGAGTGACAGGGAGGCTGCTGCATGCCATGCCGTGGTGACTCAGATAGCTTTCTGATGCTTTGGATTAATGGTTTGGTTTAGGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472776.1
CDS CCA 90 bp GGTCTTCTCCGATTACGGAATAAATTGCCACTAAGCAAAACACGCTaGCCTTACGCACACTACTTTCGGTGTTGTCATAACCCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GLLRLRNKLPLSKTR*PYAHYFRCCHNPAA
Trigger: TGCTGCAGGGTTATGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGACGTATCTGGGAGGTaGCCTCTTTGTTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEDVSGR*PLCSLK
Trigger: CTTCAGCGAACAAAGAGGCAACCTCCCAGATACGTC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGTCTGTCTATTAGACTaGGCAGCACTGTGCCGATCT +
Preference number: 5 (lower is better)
Translates to: DVIVSLSQETEDWASDIQVCLLD*AALCRS
Trigger: AGATCGGCACAGTGCTGCCAAGTCTAATAGACAGAC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKICGTI*LSVKVC
Trigger: ACAGACTTTAACACTAAGCAAGATTGTGCCACATAT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGGATCTCCAAGTAAGTaGCATATATGTGGCACAATC +
Preference number: 5 (lower is better)
Translates to: IRESWKETVRVHSQFYAEGSPSK*HICGTI
Trigger: GATTGTGCCACATATATGCAACTTACTTGGAGATCC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCACCAGCTCCTTCTTTaGCAGCTGAAGACTTGGATC +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTHQLLL*QLKTWI
Trigger: GATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGACTTAGAGGTACAGTaGCTTGTTATGACAGGTATT +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGDLEVQ*LVMTGI
Trigger: AATACCTGTCATAACAAGCAACTGTACCTCTAAGTC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGTCGTTGACACAGATTaGGTACTAACTGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLVVDTD*VLTVEA
Trigger: AGCTTCTACAGTTAGTACCAAATCTGTGTCAACGAC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTT +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYGVEAT*VALPEL
Trigger: AAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTTGAGGTTTGGAGTTaGAGTTTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: NICGPPCTDWAADEGGGELEVWS*SLIHNK
Trigger: TTTATTGTGGATCAAACTCAAACTCCAAACCTCAAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATACTTGAGGTTTGGAGTTaGAGTTTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: HPASAFSPSSCSGLCTAILEVWS*SLIHNK
Trigger: TTTATTGTGGATCAAACTCAAACTCCAAACCTCAAG...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTTCAGGATTGCAACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATTCAGGATTGCAACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: IRESWKETVRVHSQFYAEFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATTCAGGATTGCAACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTCAGGATTGCAACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTACTCGCTCATTGTGGTaGGACAGCTCTTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTTRSLW*DSSFRR
Trigger: CCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCCTCCACTCGCTCATaGTGGTTGGACAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSSTRS*WLDSSF
Trigger: GAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGGAGCAGAATGGTCTaGAAGTGCTCCTCCCAGACA +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADERSRMV*KCSSQT
Trigger: TGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCCT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTATCCTCTCGACGACTTaGGTCTGCATCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTILSTT*VCILMA
Trigger: TGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGAT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTGTTCTTGCCAAGACTaGATTCCCATTTTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQCSCQD*IPIFSR
Trigger: CCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATGTTCTTGCCAAGACTaGATTCCCATTTTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYACSCQD*IPIFSR
Trigger: CCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGGCTTAGGCAGAACTTaGAGGGGAGGAAACAAGTTG +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGGLGRT*RGGNKL
Trigger: CAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAGTGTAACATTACGCTaGATAAATAAAGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSVTLR*INKGWQ
Trigger: CTGCCACCCTTTATTTATCAAGCGTAATGTTACACT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCAGAGCTTTGCCGTCTaGTGCGGATCCGACCCTCCG +
Preference number: 5 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNQSFAV*CGSDPP
Trigger: CGGAGGGTCGGATCCGCACAAGACGGCAAAGCTCTG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000455322.6
CDS-3UTR CAA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACATAGTCCAGCATGCTaGGAGACAGACCCCCATGGG +
Preference number: 5 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTHSPAC*ETDPHG
Trigger: CCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTATTTTCCTGGGGAACTaGACCGGCTGCCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSIFLGN*TGCQAG
Trigger: CCCAGCCTGGCAGCCGGTCAAGTTCCCCAGGAAAAT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS TCA 90 bp AGACCCAGCTCACATGTTCAAGGAGACATCTCTGAAGCTCTGTGGTaGCACTATTTTATGGTGAGAATATGGAGCATCGCAGTCCTTACC +
Preference number: 5 (lower is better)
Translates to: RPSSHVQGDISEALW*HYFMVRIWSIAVLT
Trigger: GGTAAGGACTGCGATGCTCCATATTCTCACCATAAAATAGTGTCACCACAGAGCTTCAGAGATGTCTCCTTGAACATGTGAGCTGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491646.1
CDS CCA 90 bp CTGGAATTCTTGAGGTGGTTGTGCAGGAGTTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCACCAAGTAACATGGTAAATTCAGGA +
Preference number: 5 (lower is better)
Translates to: LEFLRWLCRSLVAPS*NVFGKAPSNMVNSG
Trigger: TCCTGAATTTACCATGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCACAACCACCTCAAGAATTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCTCGAACCTGGCTGTTaGGATCTCCAAGTAAGTTGC +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLLEPGC*DLQVSC
Trigger: GCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATGCTCCCAATCATGCTaGTCATCAGATAATATTTCC +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVCSQSC*SSDNIS
Trigger: GGAAATATTATCTGATGACAAGCATGATTGGGAGCA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGATGTGGCCATAATTTaGGCACTGTTTGGAATTAAA +
Preference number: 5 (lower is better)
Translates to: INICGPPCTDWAADEGGGDVAII*ALFGIK
Trigger: TTTAATTCCAAACAGTGCCAAAATTATGGCCACATC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGACTTAGAGGTACAGTaGCTTGTTATGACAGGTATT +
Preference number: 5 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVDLEVQ*LVMTGI
Trigger: AATACCTGTCATAACAAGCAACTGTACCTCTAAGTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCAGAGCTTTGCCGTCTaGTGCGGATCCGACCTAAGG +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSQSFAV*CGSDLR
Trigger: CCTTAGGTCGGATCCGCACAAGACGGCAAAGCTCTG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263710.8
ENST00000409078.8
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGCTCAGAGCAAACACTaGAGGCATCACTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLAQSKH*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGAACTAGCACAGTGGTaGAGAACTTCTGCTACATCC +
Preference number: 5 (lower is better)
Translates to: DVIVSLSQETEDWASDIQELAQW*RTSATS
Trigger: GGATGTAGCAGAAGTTCTCAACCACTGTGCTAGTTC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTGGTTGTGCAGGAGTTaGGTGGCACCATCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVWLCRS*VAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCACAACCA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGTCCGGCCAATCGTATaGCTTGGAGAGCCCACACTG +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYVRPIV*LGEPTL
Trigger: CAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGAC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGATATCACACTCCTTTTaGCCATCTCGTTTAATTGGC +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLISHSF*PSRLIG
Trigger: GCCAATTAAACGAGATGGCAAAAAGGAGTGTGATAT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTACTTTGGTCTGCATCTaGATGGCAGCAAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGTLVCI*MAARLM
Trigger: CATCAACCTTGCTGCCATCAAGATGCAGACCAAAGT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTACTTTGGTCTGCATCTaGATGGCAGCAAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTTLVCI*MAARLM
Trigger: CATCAACCTTGCTGCCATCAAGATGCAGACCAAAGT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAATCCTCTCGACGACTTaGGTCTGCATCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEILSTT*VCILMA
Trigger: TGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGAT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGAGCTGCTGTTGCTGTaGGTGGTCTGGGCCCTCTTT +
Preference number: 5 (lower is better)
Translates to: IVISSLSRLFLALNPTLNELLLL*VVWALF
Trigger: AAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTATTTCCAAACATTATaGTTAGCAAAGTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRYFQTL*LAKSWW
Trigger: CCACCAGGACTTTGCTAACAATAATGTTTGGAAATA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTATTTCCAAACATTATaGTTAGCAAAGTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVYFQTL*LAKSWW
Trigger: CCACCAGGACTTTGCTAACAATAATGTTTGGAAATA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACCATAGTCCAGCATGCTaGGAGACAGACCCCCATGGG +
Preference number: 5 (lower is better)
Translates to: IVISSLSRLFLALNPTLNHSPAC*ETDPHG
Trigger: CCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATG...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCCACTAAGCTGTTTATaGCTGCATCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADPLSCL*LHLEPG
Trigger: GCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACGTTTCTCCGAGAACTaGGTGGAGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTRFSEN*VEPWMM
Trigger: CATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTTGCAGCTGAAGACTaGGATCCAAGGGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEFAAED*DPRVDE
Trigger: TTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGCACCAGCTCCTTCTTTaGCAGCTGAAGACTTGGATC +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVHQLLL*QLKTWI
Trigger: GATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTG...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCACCAGCTCCTTCTTTaGCAGCTGAAGACTTGGATC +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADHQLLL*QLKTWI
Trigger: GATCCAAGTCTTCAGCTGCAAAAGAAGGAGCTGGTG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGATGTGGCCATAATTTaGGCACTGTTTGGAATTAAA +
Preference number: 5 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVDVAII*ALFGIK
Trigger: TTTAATTCCAAACAGTGCCAAAATTATGGCCACATC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGATGTGGCCATAATTTaGGCACTGTTTGGAATTAAA +
Preference number: 5 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTDVAII*ALFGIK
Trigger: TTTAATTCCAAACAGTGCCAAAATTATGGCCACATC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGATGTGGCCATAATTTaGGCACTGTTTGGAATTAAA +
Preference number: 5 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLDVAII*ALFGIK
Trigger: TTTAATTCCAAACAGTGCCAAAATTATGGCCACATC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTC +
Preference number: 5 (lower is better)
Translates to: IVISSLSRLFLALNPTLNEETLD*ALAAAF
Trigger: GAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCTTGAGGCATCACTGTaGGCATCATCGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLLEASL*ASSSEY
Trigger: GTATTCTGACGATGATGCCAACAGTGATGCCTCAAG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCGCGGAGGCTGGGTGTaGAGTAGTGAGGTCTTGTTA +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSRGGWV*SSEVLL
Trigger: TAACAAGACCTCACTACTCAACACCCAGCCTCCGCG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATACTCGCTCATTGTGGTaGGACAGCTCTTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADTRSLW*DSSFRR
Trigger: CCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAACGCCAGTGCTCGAATaGAATGGTCTTTGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADETPVLE*NGLCLQ
Trigger: TTGGAGACAAAGACCATTCAATTCGAGCACTGGCGT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGCAGCAATGACTCCTTaGCGATCCTCTCGACGACTT +
Preference number: 5 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTAAMTP*RSSRRL
Trigger: AAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTTAGTAGCTTCATCTaGCTCCCTGTGAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEFSSFI*LPVSCA
Trigger: TGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 5 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCTCCTCACAGGCTTCTaGCTCCTGGAGTCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYLLTGF*LLESPN
Trigger: GTTAGGAGACTCCAGGAGCAAGAAGCCTGTGAGGAG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS GCA 90 bp TTCTCTATGTGCGATGTGCAGATCACAGACCAGGCATGTCAGAAATaGCTAGTTTGTCACATTCAAGTGTCCCAGCATGATGAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: FSMCDVQITDQACQK*LVCHIQVSQHDEAF
Trigger: AAAAGCTTCATCATGCTGGGACACTTGAATGTGACAAACTAGGCATTTCTGACATGCCTGGTCTGTGATCTGCACATCGCACATAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472776.1
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGACGTATCTGGGAGGTaGCCTCTTTGTTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYDVSGR*PLCSLK
Trigger: CTTCAGCGAACAAAGAGGCAACCTCCCAGATACGTC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTATAGTCTATCAGTTCTaGGCCAACCTGCAATCGTTT +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTIVYQF*ANLQSF
Trigger: AAACGATTGCAGGTTGGCCAAGAACTGATAGACTAT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQICGTI*LSVKVC
Trigger: ACAGACTTTAACACTAAGCAAGATTGTGCCACATAT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGAACTTGGTGGAGCCTaGGATGATGTAGAACTAGCA +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVELGGA*DDVELA
Trigger: TGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACTTGGTGGAGCCTaGGATGATGTAGAACTAGCA +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADELGGA*DDVELA
Trigger: TGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCGTTTCTCCGAGAACTaGGTGGAGCCTTGGATGATG +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSRFSEN*VEPWMM
Trigger: CATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTTTGCAGCTGAAGACTaGGATCCAAGGGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADFAAED*DPRVDE
Trigger: TTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATTCTGGCTTCTATTCTaGCTTCGGAATCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: DVIVSLSQETEDWASDIQFWLLF*LRNQHH
Trigger: ATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACTATTCGGTTTGGACTaGTTTCCCGGCTACATCCCT +
Preference number: 5 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTLFGLD*FPGYIP
Trigger: AGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCTTGAGGCATCACTGTaGGCATCATCGTCAGAATAC +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADLEASL*ASSSEY
Trigger: GTATTCTGACGATGATGCCAACAGTGATGCCTCAAG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACTAGCACAGTGGTaGAGAACTTCTGCTACATCC +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADELAQW*RTSATS
Trigger: GGATGTAGCAGAAGTTCTCAACCACTGTGCTAGTTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATTCCTCCACTCGCTCATaGTGGTTGGACAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYSSTRS*WLDSSF
Trigger: GAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGA...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGACGCCAGTGCTCGAATaGAATGGTCTTTGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVTPVLE*NGLCLQ
Trigger: TTGGAGACAAAGACCATTCAATTCGAGCACTGGCGT...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGTCTGGGGTAGGGACCTaGTCGGTGGAGTCGATTAGG +
Preference number: 5 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVSGVGT*SVESIR
Trigger: CCTAATCGACTCCACCGACAAGGTCCCTACCCCAGA...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGGCTTAGGCAGAACTTaGAGGGGAGGAAACAAGTTG +
Preference number: 5 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTGLGRT*RGGNKL
Trigger: CAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCTCTCTAGGCTTTTCTaGGCTCTTAATCCCACATTA +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGLSRLF*ALNPTL
Trigger: TAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACTCTCTAGGCTTTTCTaGGCTCTTAATCCCACATTA +
Preference number: 5 (lower is better)
Translates to: DVIVSLSQETEDWASDIQLSRLF*ALNPTL
Trigger: TAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCTCACAGGCTTCTTCTaGCTCCTGGAGTCTCCTAAC +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSLTGFF*LLESPN
Trigger: GTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGAG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR CAA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCATAGTCCAGCATGCTaGGAGACAGACCCCCATGGG +
Preference number: 5 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVHSPAC*ETDPHG
Trigger: CCCATGGGGGTCTGTCTCCAAGCATGCTGGACTATG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTGTGCTCCAGAGGCATaGAGTGTTGCTATAAGGCAG +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSCAPEA*SVAIRQ
Trigger: CTGCCTTATAGCAACACTCAATGCCTCTGGAGCACA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATGCTCCCAATCATGCTaGTCATCAGATAATATTTCC +
Preference number: 5 (lower is better)
Translates to: DVIVSLSQETEDWASDIQCSQSC*SSDNIS
Trigger: GGAAATATTATCTGATGACAAGCATGATTGGGAGCA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCTATTCGGTTTGGACTaGTTTCCCGGCTACATCCCT +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYLFGLD*FPGYIP
Trigger: AGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGCTCAGAGCAAACACTaGAGGCATCACTGTTGGCAT +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSAQSKH*RHHCWH
Trigger: ATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCATCCTGGAATGTTTTaGGCAAGGCACCAAGTAACA +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADHPGMF*ARHQVT
Trigger: TGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTATATCACACTCCTTTTaGCCATCTCGTTTAATTGGC +
Preference number: 5 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGISHSF*PSRLIG
Trigger: GCCAATTAAACGAGATGGCAAAAAGGAGTGTGATAT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTACTCGCTCATTGTGGTaGGACAGCTCTTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSTRSLW*DSSFRR
Trigger: CCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGTAATACCCAACCCCTaGAAACGCGTCCCTCAAGTT +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSVIPNP*KRVPQV
Trigger: AACTTGAGGGACGCGTTTCAAGGGGTTGGGTATTAC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS GCA 90 bp TTATTGCTGCATCTCGAACCTGGCTGTTTGGATCTCCAAGTAAGTTaGATATATGTGGCACAATCTTGCTTAGTGTTAAAGTCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: LLLHLEPGCLDLQVS*IYVAQSCLVLKSVL
Trigger: GAGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATGCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGCAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000474065.5
ENST00000485112.1
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATATAGTCTATCAGTTCTaGGCCAACCTGCAATCGTTT +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADIVYQF*ANLQSF
Trigger: AAACGATTGCAGGTTGGCCAAGAACTGATAGACTAT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGGTCTGTCTATTAGACTaGGCAGCACTGTGCCGATCT +
Preference number: 5 (lower is better)
Translates to: TKMVKMPFTRLTETMLELVCLLD*AALCRS
Trigger: AGATCGGCACAGTGCTGCCAAGTCTAATAGACAGAC...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTCGAGTACGGAAATTCTaGTGTTTGAAGCCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSRVRKF*CLKPPS
Trigger: GCTTGGAGGCTTCAAACACAAGAATTTCCGTACTCG...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCTCGAACCTGGCTGTTaGGATCTCCAAGTAAGTTGC +
Preference number: 5 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNLEPGC*DLQVSC
Trigger: GCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCCACTAAGCTGTTTATaGCTGCATCTCGAACCTGGC +
Preference number: 5 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNPLSCL*LHLEPG
Trigger: GCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGAACTTGGTGGAGCCTaGGATGATGTAGAACTAGCA +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSELGGA*DDVELA
Trigger: TGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGAACTTGGTGGAGCCTaGGATGATGTAGAACTAGCA +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYELGGA*DDVELA
Trigger: TGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGACTTAGAGGTACAGTaGCTTGTTATGACAGGTATT +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEDLEVQ*LVMTGI
Trigger: AATACCTGTCATAACAAGCAACTGTACCTCTAAGTC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTTCTGGCTTCTATTCTaGCTTCGGAATCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADFWLLF*LRNQHH
Trigger: ATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGTCGTTGACACAGATTaGGTACTAACTGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVVVDTD*VLTVEA
Trigger: AGCTTCTACAGTTAGTACCAAATCTGTGTCAACGAC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTATATCACACTCCTTTTaGCCATCTCGTTTAATTGGC +
Preference number: 5 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLISHSF*PSRLIG
Trigger: GCCAATTAAACGAGATGGCAAAAAGGAGTGTGATAT...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATACGCCAGTGCTCGAATaGAATGGTCTTTGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYTPVLE*NGLCLQ
Trigger: TTGGAGACAAAGACCATTCAATTCGAGCACTGGCGT...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGATCCTCTCGACGACTTaGGTCTGCATCTTGATGGCA +
Preference number: 5 (lower is better)
Translates to: TKMVKMPFTRLTETMLELILSTT*VCILMA
Trigger: TGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGAT...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTTTAGTAGCTTCATCTaGCTCCCTGTGAGCTGTGCA +
Preference number: 5 (lower is better)
Translates to: IVISSLSRLFLALNPTLNFSSFI*LPVSCA
Trigger: TGCACAGCTCACAGGGAGCAAGATGAAGCTACTAAA...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGCAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTATTTCCAAACATTATaGTTAGCAAAGTCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTYFQTL*LAKSWW
Trigger: CCACCAGGACTTTGCTAACAATAATGTTTGGAAATA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTCTGTCTATTAGACTaGGCAGCACTGTGCCGATCT +
Preference number: 5 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVVCLLD*AALCRS
Trigger: AGATCGGCACAGTGCTGCCAAGTCTAATAGACAGAC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCGAGTACGGAAATTCTaGTGTTTGAAGCCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNRVRKF*CLKPPS
Trigger: GCTTGGAGGCTTCAAACACAAGAATTTCCGTACTCG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGTGTGCTCCAGAGGCATaGAGTGTTGCTATAAGGCAG +
Preference number: 5 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVCAPEA*SVAIRQ
Trigger: CTGCCTTATAGCAACACTCAATGCCTCTGGAGCACA...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: LIVINICGPPCTDWAADEICGTI*LSVKVC
Trigger: ACAGACTTTAACACTAAGCAAGATTGTGCCACATAT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTGCTCCCAATCATGCTaGTCATCAGATAATATTTCC +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADCSQSC*SSDNIS
Trigger: GGAAATATTATCTGATGACAAGCATGATTGGGAGCA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGACTTAGAGGTACAGTaGCTTGTTATGACAGGTATT +
Preference number: 5 (lower is better)
Translates to: ILIVINICGPPCTDWAADDLEVQ*LVMTGI
Trigger: AATACCTGTCATAACAAGCAACTGTACCTCTAAGTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGATATCACACTCCTTTTaGCCATCTCGTTTAATTGGC +
Preference number: 5 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVISHSF*PSRLIG
Trigger: GCCAATTAAACGAGATGGCAAAAAGGAGTGTGATAT...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACTTTGGTCTGCATCTaGATGGCAGCAAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNTLVCI*MAARLM
Trigger: CATCAACCTTGCTGCCATCAAGATGCAGACCAAAGT...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGTCGTTGACACAGATTaGGTACTAACTGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYVVDTD*VLTVEA
Trigger: AGCTTCTACAGTTAGTACCAAATCTGTGTCAACGAC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGGGATCTCCAAGTAAGTaGCATATATGTGGCACAATC +
Preference number: 5 (lower is better)
Translates to: TKMVKMPFTRLTETMLELGSPSK*HICGTI
Trigger: GATTGTGCCACATATATGCAACTTACTTGGAGATCC...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAGATGTGGCCATAATTTaGGCACTGTTTGGAATTAAA +
Preference number: 5 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTDVAII*ALFGIK
Trigger: TTTAATTCCAAACAGTGCCAAAATTATGGCCACATC...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATTTCAGGATTGCAACTTaGACCTTGAGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNFRIAT*TLRFGV
Trigger: AACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAA...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATATATCACACTCCTTTTaGCCATCTCGTTTAATTGGC +
Preference number: 5 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYISHSF*PSRLIG
Trigger: GCCAATTAAACGAGATGGCAAAAAGGAGTGTGATAT...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTGTTCTTGCCAAGACTaGATTCCCATTTTTAGTAGG +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSCSCQD*IPIFSR
Trigger: CCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTAGTGTAACATTACGCTaGATAAATAAAGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSSVTLR*INKGWQ
Trigger: CTGCCACCCTTTATTTATCAAGCGTAATGTTACACT...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS CCA 90 bp AAGTATTGTAAAACTACTGAAAGAAGTGTTAACTGGAATGGGTCTTaGAGACTAGTCAGAAGTTACATTAAAGAGACCCAGCTCACATGT +
Preference number: 5 (lower is better)
Translates to: KYCKTTERSVNWNGS*RLVRSYIKETQLTC
Trigger: ACATGTGAGCTGGGTCTCTTTAATGTAACTTCTGACTAGTCTCCAAGACCCATTCCAGTTAACACTTCTTTCAGTAGTTTTACAATACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491646.1
CDS-3UTR CAA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGGATCTCCAAGTAAGTaGCATATATGTGGCACAATC +
Preference number: 5 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVGSPSK*HICGTI
Trigger: GATTGTGCCACATATATGCAACTTACTTGGAGATCC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGATGTGGCCATAATTTaGGCACTGTTTGGAATTAAA +
Preference number: 5 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSDVAII*ALFGIK
Trigger: TTTAATTCCAAACAGTGCCAAAATTATGGCCACATC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGCTTGAGGTTTGGAGTTaGAGTTTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: TKMVKMPFTRLTETMLELLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAAACTCAAACTCCAAACCTCAAG...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CAA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGAGTGTAACATTACGCTaGATAAATAAAGGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVSVTLR*INKGWQ
Trigger: CTGCCACCCTTTATTTATCAAGCGTAATGTTACACT...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS CCA 90 bp ATGTTTCCATTATCTTCCCTTTTTAAAAGTAACAAAGATCTCCAATaGCTTGACAAACTCATAAATAATATCATGACACCGGTTGCCAGG +
Preference number: 5 (lower is better)
Translates to: MFPLSSLFKSNKDLQ*LDKLINNIMTPVAR
Trigger: CCTGGCAACCGGTGTCATGATATTATTTATGAGTTTGTCAAGCCATTGGAGATCTTTGTTACTTTTAAAAAGGGAAGATAATGGAAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418989.5
CDS-3UTR CAA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVICGTI*LSVKVC
Trigger: ACAGACTTTAACACTAAGCAAGATTGTGCCACATAT...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CAA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGCTTGAGGTTTGGAGTTaGAGTTTGATCCACAATAAA +
Preference number: 5 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVLEVWS*SLIHNK
Trigger: TTTATTGTGGATCAAACTCAAACTCCAAACCTCAAG...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS CCA 72 bp CCCCATGGGAACAGTTGGTGGGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTCGGGAGGGCGTCCGGC +
Preference number: 6 (lower is better)
Translates to: PHGNSWWVRSGG*SCCWCVGRASG
Trigger: GCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CCA 72 bp GCAATACAGCGTAGCCAAACCCGGGTTAGCTGCGGGTaGAGTTCAAGAGCGCGCCGCGGTCCCGCCCCCGCC +
Preference number: 6 (lower is better)
Translates to: AIQRSQTRVSCG*SSRARRGPAPA
Trigger: GGCGGGGGCGGGACCGCGGCGCGCTCTTGAACTCCACCCGCAGCTAACCCGGGTTTGGCTACGCTGTATTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485112.1
CDS TCA 72 bp CCCGCGGCCCCGGGAAGGCGCGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTATCCAGAGCTGTCCGGC +
Preference number: 6 (lower is better)
Translates to: PAAPGRRAEAGC*VVRSCYPELSG
Trigger: GCCGGACAGCTCTGGATAACAAGACCTCACTACTCAACACCCAGCCTCCGCGCGCCTTCCCGGGGCCGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS GCA 72 bp GGGAACAGTTGGTGGGTGAGGTCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGGGCGTCCGGCCAATCG +
Preference number: 6 (lower is better)
Translates to: GNSWWVRSGGWS*CWCVGRASGQS
Trigger: CGATTGGCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS GCA 72 bp CCTGCAGCCGGGTCACCAGGGCGGACAGGATGTCCATaGCCAGCAGAACCACCTGCAGCGGGAAACACCGGG +
Preference number: 6 (lower is better)
Translates to: PAAGSPGRTGCP*PAEPPAAGNTG
Trigger: CCCGGTGTTTCCCGCTGCAGGTGGTTCTGCTGGGCATGGACATCCTGTCCGCCCTGGTGACCCGGCTGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485112.1
CDS CAA 72 bp GCCCGCGGCCCCGGGAAGGCGCGCGGAGGCTGGGTGTaGAGTAGTGAGGTCTTGTTATCCAGAGCTGTCCGG +
Preference number: 6 (lower is better)
Translates to: ARGPGKARGGWV*SSEVLLSRAVR
Trigger: CCGGACAGCTCTGGATAACAAGACCTCACTACTCAACACCCAGCCTCCGCGCGCCTTCCCGGGGCCGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS TCA 72 bp CGGCTGCTCTCACGGCTGGTATCGCGGCTGCACCCCTaGCTCATGCTGGGTCGAGGGATACGGCTGCTCCGT +
Preference number: 6 (lower is better)
Translates to: RLLSRLVSRLHP*LMLGRGIRLLR
Trigger: ACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 72 bp TCTCGCGCCCGCGGCCCCGGGAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTCTTGTTATCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: SRARGPGKARGG*VLSSEVLLSRA
Trigger: AGCTCTGGATAACAAGACCTCACTACTCAACACCCAGCCTCCGCGCGCCTTCCCGGGGCCGCGGGCGCGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS GCA 72 bp GGCAGCACTGTGCCGATCTGCGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCGGACAGGATGTCCATG +
Preference number: 6 (lower is better)
Translates to: GSTVPICALNRS*SRVTRADRMSM
Trigger: CATGGACATCCTGTCCGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000485112.1
ENST00000541377.5
CDS GCA 72 bp GTGGAGGAAAGCCCCGAGCAGGGCTTGTATCTCGGCTaGTCTCACGGCTGGTATCGCGGCTGCACCCCTGAC +
Preference number: 6 (lower is better)
Translates to: VEESPEQGLYLG*SHGWYRGCTPD
Trigger: GTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCCCTGCTCGGGGCTTTCCTCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 72 bp CCCGAGCAGGGCTTGTATCTCGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCTGACTCATGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: PEQGLYLGCSHG*YRGCTPDSCWV
Trigger: GACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCCCTGCTCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 72 bp AGTTGGTGGGTGAGGTCAGGGGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCCGGCCAATCGTATTGC +
Preference number: 6 (lower is better)
Translates to: SWWVRSGGWSCC*CVGRASGQSYC
Trigger: GCAATACGATTGGCCGGACGCCCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CAA 72 bp CGACTGCGGCCCCGGTTATCAGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTTTGCCGTCTTGTGCGG +
Preference number: 6 (lower is better)
Translates to: RLRPRLSGVEAT*VALPELCRLVR
Trigger: CCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACCTGATAACCGGGGCCGCAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 90 bp GGCCAAGCCCAAACCGATCAAGTGGAGGAAAGCCCCGAGCAGGGCTaGTATCTCGGCTGCTCTCACGGCTGGTATCGCGGCTGCACCCCT +
Preference number: 6 (lower is better)
Translates to: GQAQTDQVEESPEQG*YLGCSHGWYRGCTP
Trigger: AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCCCTGCTCGGGGCTTTCCTCCACTTGATCGGTTTGGGCTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CAA 90 bp CTGAGTCACCACGGCATGGCATGCAGCAGCCTCCCTGTCACTCAGTaGCCATGCAAGTCCCCTCTAGCTGGCCCTGGGCATGGCCTGCCA +
Preference number: 6 (lower is better)
Translates to: LSHHGMACSSLPVTQ*PCKSPLAGPGHGLP
Trigger: TGGCAGGCCATGCCCAGGGCCAGCTAGAGGGGACTTGCATGGCAACTGAGTGACAGGGAGGCTGCTGCATGCCATGCCGTGGTGACTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472776.1
CDS CAA 90 bp ACTTTAGCGCGACTGCGGCCCCGGTTATCAGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTTTGCCGTCTTGTGCGGATCCGACCC +
Preference number: 6 (lower is better)
Translates to: TLARLRPRLSGVEAT*VALPELCRLVRIRP
Trigger: GGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACCTGATAACCGGGGCCGCAGTCGCGCTAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000455322.6
CDS GCA 72 bp TCTCACGGCTGGTATCGCGGCTGCACCCCTGACTCATaGTGGGTCGAGGGATACGGCTGCTCCGTGCTAATC +
Preference number: 6 (lower is better)
Translates to: SHGWYRGCTPDS*WVEGYGCSVLI
Trigger: GATTAGCACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS GCA 72 bp TTGTATCTCGGCTGCTCTCACGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGGGTCGAGGGATACGGC +
Preference number: 6 (lower is better)
Translates to: LYLGCSHGWYRG*TPDSCWVEGYG
Trigger: GCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS GCA 72 bp GCCGTCTGGATGATGGGGCAGAGCACCTTGATGCACTaGTCCGGGTGGATGGAACTGGCCAGTGTGGACGCA +
Preference number: 6 (lower is better)
Translates to: AVWMMGQSTLMH*SGWMELASVDA
Trigger: TGCGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCATCATCCAGACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS GCA 72 bp ATGGCATGCAGCAGCCTCCCTGTCACTCAGTTGCCATaGAAGTCCCCTCTAGCTGGCCCTGGGCATGGCCTG +
Preference number: 6 (lower is better)
Translates to: MACSSLPVTQLP*KSPLAGPGHGL
Trigger: CAGGCCATGCCCAGGGCCAGCTAGAGGGGACTTGCATGGCAACTGAGTGACAGGGAGGCTGCTGCATGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472776.1
CDS GCA 72 bp GGTGTAGAGGCGACGTTGGTGGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGACCTGAGTCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: GVEATLVALPEL*RLVRIRPESRP
Trigger: AGGCCTGGACTCAGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS CCA 72 bp CACGGCTGGTATCGCGGCTGCACCCCTGACTCATGCTaGGTCGAGGGATACGGCTGCTCCGTGCTAATCCTA +
Preference number: 6 (lower is better)
Translates to: HGWYRGCTPDSC*VEGYGCSVLIL
Trigger: TAGGATTAGCACGGAGCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 72 bp ACCGACTTGGAGACAGACCCCCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGGTCCTGCTGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: TDLETDPHGNSW*VRSGGWSCCWC
Trigger: ACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCCAAGTCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 72 bp GCATGCTTGGAGACAGACCCCCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGGTCCTGCTGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: ACLETDPHGNSW*VRSGGWSCCWC
Trigger: ACACCAGCAGCAGGACCAGCCCCCTGACCTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCCAAGCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CCA 72 bp CACTCAGTTGCCATGCAAGTCCCCTCTAGCTGGCCCTaGGCATGGCCTGCCACCTCCTGGCAATCCTCCCAT +
Preference number: 6 (lower is better)
Translates to: HSVAMQVPSSWP*AWPATSWQSSH
Trigger: ATGGGAGGATTGCCAGGAGGTGGCAGGCCATGCCCAGGGCCAGCTAGAGGGGACTTGCATGGCAACTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472776.1
CDS CAA 72 bp CACGGCATGGCATGCAGCAGCCTCCCTGTCACTCAGTaGCCATGCAAGTCCCCTCTAGCTGGCCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: HGMACSSLPVTQ*PCKSPLAGPGH
Trigger: ATGCCCAGGGCCAGCTAGAGGGGACTTGCATGGCAACTGAGTGACAGGGAGGCTGCTGCATGCCATGCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472776.1
CDS CAA 90 bp ACTTTAGCGCGACTGCGGCCCCGGTTATCAGGTGTAGAGGCGACGTaGGTGGCACTCCCAGAGCTTTGCCGTCTTGTGCGGATCCGACCT +
Preference number: 6 (lower is better)
Translates to: TLARLRPRLSGVEAT*VALPELCRLVRIRP
Trigger: AGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACCTGATAACCGGGGCCGCAGTCGCGCTAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000409078.8
ENST00000452274.6
ENST00000541377.5
CDS TCA 72 bp CTATTAGACTTGGCAGCACTGTGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGGTCACCAGGGCGGACA +
Preference number: 6 (lower is better)
Translates to: LLDLAALCRSAP*TDPAAGSPGRT
Trigger: TGTCCGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCTGCCAAGTCTAATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000485112.1
ENST00000541377.5
CDS GCA 72 bp GGTGTAGAGGCGACGTTGGTGGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGACCCTCCGCTTTAGTG +
Preference number: 6 (lower is better)
Translates to: GVEATLVALPEL*RLVRIRPSALV
Trigger: CACTAAAGCGGAGGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000455322.6
CDS CAA 72 bp TCTATTAGACTTGGCAGCACTGTGCCGATCTGCGCCTaGAACCGATCCTGCAGCCGGGTCACCAGGGCGGAC +
Preference number: 6 (lower is better)
Translates to: SIRLGSTVPICA*NRSCSRVTRAD
Trigger: GTCCGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCTGCCAAGTCTAATAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000485112.1
ENST00000541377.5
CDS CAA 72 bp CAAACCGATCAAGTGGAGGAAAGCCCCGAGCAGGGCTaGTATCTCGGCTGCTCTCACGGCTGGTATCGCGGC +
Preference number: 6 (lower is better)
Translates to: QTDQVEESPEQG*YLGCSHGWYRG
Trigger: GCCGCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCCCTGCTCGGGGCTTTCCTCCACTTGATCGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS TCA 72 bp TTTCAGGGCGGTCTTGTCGTAGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTAGTCTCGCGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: FQGGLVVGVDGI*VGVRVVVSRPR
Trigger: CCGCGGGCGCGAGACTACAACCCGTACCCCTACTCAGATGCCATCAACACCTACGACAAGACCGCCCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS GCA 72 bp TCTTGGCCAACCTGCAATCGTTTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAGGACTCCATGCGAGGC +
Preference number: 6 (lower is better)
Translates to: SWPTCNRFPTSF*NTCARQDSMRG
Trigger: GCCTCGCATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAAACGATTGCAGGTTGGCCAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS CAA 72 bp AGGTGTAGAGGCGACGTTGGTGGCACTCCCAGAGCTTaGCCGTCTTGTGCGGATCCGACCCTCCGCTTTAGT +
Preference number: 6 (lower is better)
Translates to: RCRGDVGGTPRA*PSCADPTLRFS
Trigger: ACTAAAGCGGAGGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000455322.6
CDS CAA 90 bp CCGGTTATCAGGTGTAGAGGCGACGTTGGTGGCACTCCCAGAGCTTaGCCGTCTTGTGCGGATCCGACCCTCCGCTTTAGTGGTAGTACC +
Preference number: 6 (lower is better)
Translates to: PVIRCRGDVGGTPRA*PSCADPTLRFSGST
Trigger: GGTACTACCACTAAAGCGGAGGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACCTGATAACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000455322.6
CDS TCA 72 bp TATCATAGTCCAGCATGCTGGGAGAGTAAGAGCGCCTaGGAGCCTTGTGGGAGGGAGCGGTGGGGATGGAGT +
Preference number: 6 (lower is better)
Translates to: YHSPACWESKSA*EPCGRERWGWS
Trigger: ACTCCATCCCCACCGCTCCCTCCCACAAGGCTCTCAGGCGCTCTTACTCTCCCAGCATGCTGGACTATGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS GCA 72 bp GGTGTAGAGGCGACGTTGGTGGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGACCTAAGGATGCGTAT +
Preference number: 6 (lower is better)
Translates to: GVEATLVALPEL*RLVRIRPKDAY
Trigger: ATACGCATCCTTAGGTCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGCCACCAACGTCGCCTCTACACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000409078.8
ENST00000452274.6
CDS CAA 72 bp CTGCTGGTGTGTCGGGAGGGCGTCCGGCCAATCGTATaGCTTGGAGAGCCCACACTGGTGTTACTGGAATTC +
Preference number: 6 (lower is better)
Translates to: LLVCREGVRPIV*LGEPTLVLLEF
Trigger: GAATTCCAGTAACACCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGACGCCCTCCCGACACACCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS TCA 72 bp AGCTGCTGCAGAGCTGAAAGGCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGCACTGGCTGCTGCGTT +
Preference number: 6 (lower is better)
Translates to: SCCRAERRRARR*GDFGFGTGCCV
Trigger: AACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS GCA 72 bp ATTCAGCAGTCCATTAGCCCTGTTTTTCGTTACTGTTaGCGCTGCGGACCAGAGAGCCGCCGCCTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: IQQSISPVFRYC*RCGPESRRLLL
Trigger: GAGGAGAAGGCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAACAGGGCTAATGGACTGCTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS GCA 72 bp TGCTGGTGTGTCGGGAGGGCGTCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGGTGTTACTGGAATTCT +
Preference number: 6 (lower is better)
Translates to: CWCVGRASGQSY*LESPHWCYWNS
Trigger: AGAATTCCAGTAACACCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGACGCCCTCCCGACACACCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS GCA 72 bp CCCTGCAGCAAGCCTGGGATGATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCGATCCTCTCGACGACT +
Preference number: 6 (lower is better)
Translates to: PCSKPGMMSTRS*SNDSFAILSTT
Trigger: AGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS GCA 72 bp GCCATTAGCTGTGCGTGGAGACATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCTGGGCCCTCTTTATGT +
Preference number: 6 (lower is better)
Translates to: AISCAWRHRRRS*CCCWWSGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 72 bp GACAGCTCTTTCAGAAGGTCAGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGAAGCTGCTCCATGTCG +
Preference number: 6 (lower is better)
Translates to: DSSFRRSATRSE*SMGTSRSCSMS
Trigger: CGACATGGAGCAGCTTCGAGACGTGCCCATCGACCATTCTGACCTGGTGGCTGACCTTCTGAAAGAGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CAA 72 bp GAGGGATACGGCTGCTCCGTGCTAATCCTATTCGGTTaGGACTTGTTTCCCGGCTACATCCCTGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: EGYGCSVLILFG*DLFPGYIPGSW
Trigger: CCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAGCACGGAGCAGCCGTATCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CAA 72 bp AGGGCTCCCTTCCGTTCCTCCACTCGCTCATTGTGGTaGGACAGCTCTTTCAGAAGGTCAGCCACCAGGTCA +
Preference number: 6 (lower is better)
Translates to: RAPFRSSTRSLW*DSSFRRSATRS
Trigger: TGACCTGGTGGCTGACCTTCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGAGGAACGGAAGGGAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS TCA 72 bp AATCCAGATCCAGCAAAAGCTAGAGGGCAGTCACGATaGCTCCCTCCCAGCAGACGTATCTGGGAGGTTGCC +
Preference number: 6 (lower is better)
Translates to: NPDPAKARGQSR*LPPSRRIWEVA
Trigger: GGCAACCTCCCAGATACGTCTGCTGGGAGGGAGTCATCGTGACTGCCCTCTAGCTTTTGCTGGATCTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS TCA 72 bp GTGAGAATATGGAGCATCGCAGTCCTTACCCCAACGTaGTACAAGCCTCCCGCACTACCTGAGACCGCAGGT +
Preference number: 6 (lower is better)
Translates to: VRIWSIAVLTPT*YKPPALPETAG
Trigger: ACCTGCGGTCTCAGGTAGTGCGGGAGGCTTGTATCACGTTGGGGTAAGGACTGCGATGCTCCATATTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491646.1
CDS GCA 72 bp GCATCAGAAAGCTATCTGAGTCACCACGGCATGGCATaGAGCAGCCTCCCTGTCACTCAGTTGCCATGCAAG +
Preference number: 6 (lower is better)
Translates to: ASESYLSHHGMA*SSLPVTQLPCK
Trigger: CTTGCATGGCAACTGAGTGACAGGGAGGCTGCTGCATGCCATGCCGTGGTGACTCAGATAGCTTTCTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472776.1
CDS CCA 72 bp ACTTGGATCCAAGGGTGGATGAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTCTCCGAGAACTTGGTG +
Preference number: 6 (lower is better)
Translates to: TWIQGWMNQAGG*FPFQRFSENLV
Trigger: CACCAAGTTCTCGGAGAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000418989.5
ENST00000430234.5
ENST00000449975.1
ENST00000452274.6
ENST00000455322.6
ENST00000474065.5
ENST00000480007.1
ENST00000541377.5
CDS CCA 72 bp TCAGCCGCTCTCACCACCTCCTTATGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATAATCGTCAGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: SAALTTSLWESL*ASRVFIIVSSA
Trigger: CGCCGAGCTGACGATTATGAAGACTCTGGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAGAGCGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 72 bp CCCAGACGCAGTCCGAGAGTCCAGACGCATGCCGACTaGAGGACCAAAGAGATTAGCACGAAGAAGGATGAT +
Preference number: 6 (lower is better)
Translates to: PRRSPRVQTHAD*RTKEISTKKDD
Trigger: ATCATCCTTCTTCGTGCTAATCTCTTTGGTCCTCCAGTCGGCATGCGTCTGGACTCTCGGACTGCGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485112.1
CDS CAA 72 bp GCTGGCCAAGCCCAAACCGATCTAATCCTATTCGGTTaGGACTTGTTTCCCGGCTACATCCCTGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: AGQAQTDLILFG*DLFPGYIPGSW
Trigger: CCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAGATCGGTTTGGGCTTGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CAA 72 bp ACGCGCGGTCTTCTGGGTAAAACCGAGCCGCCGCTTTaGCGACCCTTCGGGAGCCTCAGAAAACAAAGAATT +
Preference number: 6 (lower is better)
Translates to: TRGLLGKTEPPL*RPFGSLRKQRI
Trigger: AATTCTTTGTTTTCTGAGGCTCCCGAAGGGTCGCAAAAGCGGCGGCTCGGTTTTACCCAGAAGACCGCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485112.1
CDS TCA 72 bp AGATGCCCCAACGTGATACAAGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCAGAGAGTTTAAAGGCT +
Preference number: 6 (lower is better)
Translates to: RCPNVIQASRTT*DRRSLAESLKA
Trigger: AGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGCTTGTATCACGTTGGGGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000430234.5
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS TCA 72 bp ACACAGCCTCTTTCAGGGCGGTCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGTACGGGTTGTAGTCTC +
Preference number: 6 (lower is better)
Translates to: TQPLSGRSCRRC*WHLSRGTGCSL
Trigger: GAGACTACAACCCGTACCCCTACTCAGATGCCATCAACACCTACGACAAGACCGCCCTGAAAGAGGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS TCA 72 bp CAAGCCTGGGATGATGTCGACAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTCGACGACTTTGGTCTG +
Preference number: 6 (lower is better)
Translates to: QAWDDVDKELQQ*LLCDPLDDFGL
Trigger: CAGACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACATCATCCCAGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS TCA 72 bp CCTTACCCCAACGTGATACAAGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCAGAGAGTTTAAAGGCT +
Preference number: 6 (lower is better)
Translates to: PYPNVIQASRTT*DRRSLAESLKA
Trigger: AGCCTTTAAACTCTCTGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGCTTGTATCACGTTGGGGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491646.1
CDS GCA 72 bp TGGAAGATGAGCGGTCTGACTGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGTGGGACTGCAGGGCTT +
Preference number: 6 (lower is better)
Translates to: WKMSGLTEAETL*CLSSSGGTAGL
Trigger: AAGCCCTGCAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 72 bp CTCCTTCTTTTGCAGCTGAAGACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGGTGGTTCCCATTCCAA +
Preference number: 6 (lower is better)
Translates to: LLLLQLKTWIQG*MNQAGGWFPFQ
Trigger: TTGGAATGGGAACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000418989.5
ENST00000430234.5
ENST00000449975.1
ENST00000452274.6
ENST00000455322.6
ENST00000474065.5
ENST00000480007.1
ENST00000541377.5
CDS CCA 72 bp CAGTCTGCCGCAGATAATGGGGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAGAGCAAACACTTGAGG +
Preference number: 6 (lower is better)
Translates to: QSAADNGECHHS*SHMSAQSKHLR
Trigger: CCTCAAGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTCCCCATTATCTGCGGCAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CAA 72 bp CACGATGACTCCCTCCCAGCAGACGTATCTGGGAGGTaGCCTCTTTGTTCGCTGAAGGTTACTAAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: HDDSLPADVSGR*PLCSLKVTKSL
Trigger: CAGGCTCTTAGTAACCTTCAGCGAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGGAGGGAGTCATCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS CAA 72 bp TACGGCTGCTCCGTGCTAATCCTATTCGGTTTGGACTaGTTTCCCGGCTACATCCCTGGCTCCTGGGAATCT +
Preference number: 6 (lower is better)
Translates to: YGCSVLILFGLD*FPGYIPGSWES
Trigger: AGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAGCACGGAGCAGCCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS CCA 72 bp GGAGAGCCCACACTGGTGTTACTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTGGCACCATCCTGGAAT +
Preference number: 6 (lower is better)
Translates to: GEPTLVLLEFLR*LCRSLVAPSWN
Trigger: ATTCCAGGATGGTGCCACCAAACTCCTGCACAACCACCTCAAGAATTCCAGTAACACCAGTGTGGGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CAA 72 bp TTGCTTGGAGAGCCCACACTGGTGTTACTGGAATTCTaGAGGTGGTTGTGCAGGAGTTTGGTGGCACCATCC +
Preference number: 6 (lower is better)
Translates to: LLGEPTLVLLEF*RWLCRSLVAPS
Trigger: GGATGGTGCCACCAAACTCCTGCACAACCACCTCAAGAATTCCAGTAACACCAGTGTGGGCTCTCCAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CAA 72 bp TGCAGCAATGACTCCTTTGCGATCCTCTCGACGACTTaGGTCTGCATCTTGATGGCAGCAAGGTTGATGGGG +
Preference number: 6 (lower is better)
Translates to: CSNDSFAILSTT*VCILMAARLMG
Trigger: CCCCATCAACCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGAGAGGATCGCAAAGGAGTCATTGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 90 bp GAGGGCAGTCACGATGACTCCCTCCCAGCAGACGTATCTGGGAGGTaGCCTCTTTGTTCGCTGAAGGTTACTAAGAGCCTGTGTTTCAAA +
Preference number: 6 (lower is better)
Translates to: EGSHDDSLPADVSGR*PLCSLKVTKSLCFK
Trigger: TTTGAAACACAGGCTCTTAGTAACCTTCAGCGAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGGAGGGAGTCATCGTGACTGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS CAA 90 bp CGGGTGGTTCCCATTCCAACGTTTCTCCGAGAACTTGGTGGAGCCTaGGATGATGTAGAACTAGCAGAGGAAGGTCTGTTACCATCCACA +
Preference number: 6 (lower is better)
Translates to: RVVPIPTFLRELGGA*DDVELAEEGLLPST
Trigger: TGTGGATGGTAACAGACCTTCCTCTGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACGTTGGAATGGGAACCACCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000418989.5
ENST00000430234.5
ENST00000449975.1
ENST00000452274.6
ENST00000455322.6
ENST00000474065.5
ENST00000480007.1
ENST00000541377.5
CDS CCA 72 bp CCTATTCGGTTTGGACTTGTTTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTTCGCTTTTCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: PIRFGLVSRLHP*LLGILLRFSED
Trigger: GTCTTCAGAAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CAA 72 bp GAGCCCACACTGGTGTTACTGGAATTCTTGAGGTGGTaGTGCAGGAGTTTGGTGGCACCATCCTGGAATGTT +
Preference number: 6 (lower is better)
Translates to: EPTLVLLEFLRW*CRSLVAPSWNV
Trigger: AACATTCCAGGATGGTGCCACCAAACTCCTGCACAACCACCTCAAGAATTCCAGTAACACCAGTGTGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CAA 72 bp CAAGCCCAAACCGATCTAATCCTATTCGGTTTGGACTaGTTTCCCGGCTACATCCCTGGCTCCTGGGAATCT +
Preference number: 6 (lower is better)
Translates to: QAQTDLILFGLD*FPGYIPGSWES
Trigger: AGATTCCCAGGAGCCAGGGATGTAGCCGGGAAACAAGTCCAAACCGAATAGGATTAGATCGGTTTGGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CAA 90 bp CTGGAGCCATATGAGCGCTCAGAGCAAACACTTGAGGCATCACTGTaGGCATCATCGTCAGAATACATCCCATACGGCTCATATCTCCTC +
Preference number: 6 (lower is better)
Translates to: LEPYERSEQTLEASL*ASSSEYIPYGSYLL
Trigger: GAGGAGATATGAGCCGTATGGGATGTATTCTGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCATATGGCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CAA 90 bp GAATGCCACCATTCCTGGAGCCATATGAGCGCTCAGAGCAAACACTaGAGGCATCACTGTTGGCATCATCGTCAGAATACATCCCATACG +
Preference number: 6 (lower is better)
Translates to: ECHHSWSHMSAQSKH*RHHCWHHRQNTSHT
Trigger: CGTATGGGATGTATTCTGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS TCA 72 bp AACCAAACCATTAATCCAAAGCATCAGAAAGCTATCTaGGTCACCACGGCATGGCATGCAGCAGCCTCCCTG +
Preference number: 6 (lower is better)
Translates to: NQTINPKHQKAI*VTTAWHAAASL
Trigger: CAGGGAGGCTGCTGCATGCCATGCCGTGGTGACTCAGATAGCTTTCTGATGCTTTGGATTAATGGTTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472776.1
CDS CCA 72 bp TGCAGATTCTTTCTCAGTGGTGAGGCATTCTCACTGTaGTCACATTACCCACGACCTGGCAAGCCTGAACAA +
Preference number: 6 (lower is better)
Translates to: CRFFLSGEAFSL*SHYPRPGKPEQ
Trigger: TTGTTCAGGCTTGCCAGGTCGTGGGTAATGTGACCACAGTGAGAATGCCTCACCACTGAGAAAGAATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480007.1
CDS CAA 72 bp AAAGGCGTCGTGCCCGAAGATGAGGAGACTTTGGATTaGGCACTGGCTGCTGCGTTCACATCAATATCACTT +
Preference number: 6 (lower is better)
Translates to: KGVVPEDEETLD*ALAAAFTSISL
Trigger: AAGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 72 bp GCTGCCAGCACCAGCAGGATTAGCAGATCTGGATCCTaGATTATGAGAGCAGACCAAAGGACAGGCAAAAAG +
Preference number: 6 (lower is better)
Translates to: AASTSRISRSGS*IMRADQRTGKK
Trigger: CTTTTTGCCTGTCCTTTGGTCTGCTCTCATAATCAAGGATCCAGATCTGCTAATCCTGCTGGTGCTGGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463621.3
CDS CAA 90 bp GCTGTGCAAGGTGAGGTTTCAGGTCTTCTCCGATTACGGAATAAATaGCCACTAAGCAAAACACGCTGGCCTTACGCACACTACTTTCGG +
Preference number: 6 (lower is better)
Translates to: AVQGEVSGLLRLRNK*PLSKTRWPYAHYFR
Trigger: CCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCGGAGAAGACCTGAAACCTCACCTTGCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS TCA 72 bp AGCATTCTGTCCCATACGTACTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGCAGAGTTTGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SILSHTYWGLAA*SMIFSSRVWSC
Trigger: GCAGGACCAAACTCTGCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCAGTACGTATGGGACAGAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000485112.1
ENST00000541377.5
CDS TCA 72 bp TCCAACGTTTCTCCGAGAACTTGGTGGAGCCTTGGATaGTGTAGAACTAGCAGAGGAAGGTCTGTTACCATC +
Preference number: 6 (lower is better)
Translates to: SNVSPRTWWSLG*CRTSRGRSVTI
Trigger: GATGGTAACAGACCTTCCTCTGCTAGTTCTACATCATCCAAGGCTCCACCAAGTTCTCGGAGAAACGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000418989.5
ENST00000430234.5
ENST00000449975.1
ENST00000452274.6
ENST00000455322.6
ENST00000474065.5
ENST00000480007.1
ENST00000541377.5
CDS TCA 72 bp ACTCCAAGGTGTGGTACAAGTGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCCAGTAACATTTTCTGG +
Preference number: 6 (lower is better)
Translates to: TPRCGTSALLLC*SDCGNPSNIFW
Trigger: CCAGAAAATGTTACTGGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 72 bp CAGCTTCAAGATCTGTACTTGTGCTCAGAACTCTCATaGCATTCACAGAACCAGGTATTCTTCCTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: QLQDLYLCSELS*HSQNQVFFLAG
Trigger: GCCAGCCAGGAAGAATACCTGGTTCTGTGAATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTGAAGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CCA 72 bp TTGAGGTGGTTGTGCAGGAGTTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCACCAAGTAACATGGTA +
Preference number: 6 (lower is better)
Translates to: LRWLCRSLVAPS*NVFGKAPSNMV
Trigger: TACCATGTTACTTGGTGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAAACTCCTGCACAACCACCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000472776.1
ENST00000541377.5
CDS CCA 72 bp CTCATGGCATTCACAGAACCAGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCTAATCCTATTCGGTTT +
Preference number: 6 (lower is better)
Translates to: LMAFTEPGILPG*PSPNRSNPIRF
Trigger: AAACCGAATAGGATTAGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGTTCTGTGAATGCCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CAA 72 bp CGAGATCGCTGGAGGGACCCAGTCGTTGACACAGATTaGGTACTAACTGTAGAAGCTCTAGATGTGGTACTT +
Preference number: 6 (lower is better)
Translates to: RDRWRDPVVDTD*VLTVEALDVVL
Trigger: AAGTACCACATCTAGAGCTTCTACAGTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTCCAGCGATCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 72 bp TATGAGCGCTCAGAGCAAACACTTGAGGCATCACTGTaGGCATCATCGTCAGAATACATCCCATACGGCTCA +
Preference number: 6 (lower is better)
Translates to: YERSEQTLEASL*ASSSEYIPYGS
Trigger: TGAGCCGTATGGGATGTATTCTGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CAA 72 bp CATTCCTGGAGCCATATGAGCGCTCAGAGCAAACACTaGAGGCATCACTGTTGGCATCATCGTCAGAATACA +
Preference number: 6 (lower is better)
Translates to: HSWSHMSAQSKH*RHHCWHHRQNT
Trigger: TGTATTCTGACGATGATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000463621.3
ENST00000541377.5
CDS CAA 90 bp ATATCACTTCGAGATCGCTGGAGGGACCCAGTCGTTGACACAGATTaGGTACTAACTGTAGAAGCTCTAGATGTGGTACTTCCAGTAGGA +
Preference number: 6 (lower is better)
Translates to: ISLRDRWRDPVVDTD*VLTVEALDVVLPVG
Trigger: TCCTACTGGAAGTACCACATCTAGAGCTTCTACAGTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 90 bp CAGGCTTCTTCAAAGCATCAGCAACAGCAGCTTCAAGATCTGTACTaGTGCTCAGAACTCTCATGGCATTCACAGAACCAGGTATTCTTC +
Preference number: 6 (lower is better)
Translates to: QASSKHQQQQLQDLY*CSELSWHSQNQVFF
Trigger: GAAGAATACCTGGTTCTGTGAATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTGAAGCTGCTGTTGCTGATGCTTTGAAGAAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263710.8
ENST00000463621.3
CDS CAA 90 bp CTCCTAACAGCAAAGCATCAGCAACAGCAGCTTCAAGATCTGTACTaGTGCTCAGAACTCTCATGGCATTCACAGAACCAGGTATTCTTC +
Preference number: 6 (lower is better)
Translates to: LLTAKHQQQQLQDLY*CSELSWHSQNQVFF
Trigger: GAAGAATACCTGGTTCTGTGAATGCCATGAGAGTTCTGAGCACAAGTACAGATCTTGAAGCTGCTGTTGCTGATGCTTTGCTGTTAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS TCA 72 bp AATATCACTTCGAGATCGCTGGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAACTGTAGAAGCTCTAGA +
Preference number: 6 (lower is better)
Translates to: NITSRSLEGPSR*HRFGTNCRSSR
Trigger: TCTAGAGCTTCTACAGTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 72 bp CAGCGCCTTCTAACTGCGACAGACTTAGAGGTACAGTaGCTTGTTATGACAGGTATTAACCTAGGGATGTGT +
Preference number: 6 (lower is better)
Translates to: QRLLTATDLEVQ*LVMTGINLGMC
Trigger: ACACATCCCTAGGTTAATACCTGTCATAACAAGCAACTGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 90 bp AATTCAAAACAGCGCCTTCTAACTGCGACAGACTTAGAGGTACAGTaGCTTGTTATGACAGGTATTAACCTAGGGATGTGTGTGTGCCGA +
Preference number: 6 (lower is better)
Translates to: NSKQRLLTATDLEVQ*LVMTGINLGMCVCR
Trigger: TCGGCACACACACATCCCTAGGTTAATACCTGTCATAACAAGCAACTGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGTTTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CCA 72 bp GTAGCAAGTCCATCCACAAGTTTATCTAACATGGTCTaGTCATGCTCAAGGTCAGCAGACTTCTGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: VASPSTSLSNMV*SCSRSADFCLS
Trigger: AGACAAACAGAAGTCTGCTGACCTTGAGCATGACCAGACCATGTTAGATAAACTTGTGGATGGACTTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS CCA 72 bp CGATTACGGAATAAATTGCCACTAAGCAAAACACGCTaGCCTTACGCACACTACTTTCGGTGTTGTCATAAC +
Preference number: 6 (lower is better)
Translates to: RLRNKLPLSKTR*PYAHYFRCCHN
Trigger: GTTATGACAACACCGAAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAGTGGCAATTTATTCCGTAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 90 bp TGGCTGTTTGGATCTCCAAGTAAGTTGCATATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGTGCTCCAGAGGCATTGAGTGTTGCT +
Preference number: 6 (lower is better)
Translates to: WLFGSPSKLHICGTI*LSVKVCAPEALSVA
Trigger: AGCAACACTCAATGCCTCTGGAGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATGCAACTTACTTGGAGATCCAAACAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000485112.1
ENST00000541377.5
CDS TCA 72 bp TCACATGTTCAAGGAGACATCTCTGAAGCTCTGTGGTaGCACTATTTTATGGTGAGAATATGGAGCATCGCA +
Preference number: 6 (lower is better)
Translates to: SHVQGDISEALW*HYFMVRIWSIA
Trigger: TGCGATGCTCCATATTCTCACCATAAAATAGTGTCACCACAGAGCTTCAGAGATGTCTCCTTGAACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491646.1
CDS TCA 72 bp AAAGAGACCCAGCTCACATGTTCAAGGAGACATCTCTaGAGCTCTGTGGTGACACTATTTTATGGTGAGAAT +
Preference number: 6 (lower is better)
Translates to: KETQLTCSRRHL*SSVVTLFYGEN
Trigger: ATTCTCACCATAAAATAGTGTCACCACAGAGCTTCAGAGATGTCTCCTTGAACATGTGAGCTGGGTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491646.1
CDS CAA 72 bp GGATCTCCAAGTAAGTTGCATATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGTGCTCCAGAGGCATTG +
Preference number: 6 (lower is better)
Translates to: GSPSKLHICGTI*LSVKVCAPEAL
Trigger: CAATGCCTCTGGAGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATGCAACTTACTTGGAGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000485112.1
ENST00000541377.5
CDS CAA 72 bp CTCCTACATGTCTGTAAATTTCCACTAAGCTGTTTATaGCTGCATCTCGAACCTGGCTGTTTGGATCTCCAA +
Preference number: 6 (lower is better)
Translates to: LLHVCKFPLSCL*LHLEPGCLDLQ
Trigger: TTGGAGATCCAAACAGCCAGGTTCGAGATGCAGCAATAAACAGCTTAGTGGAAATTTACAGACATGTAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000474065.5
ENST00000485112.1
ENST00000541377.5
CDS GCA 72 bp CATCTCGAACCTGGCTGTTTGGATCTCCAAGTAAGTTaGATATATGTGGCACAATCTTGCTTAGTGTTAAAG +
Preference number: 6 (lower is better)
Translates to: HLEPGCLDLQVS*IYVAQSCLVLK
Trigger: CTTTAACACTAAGCAAGATTGTGCCACATATATGCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000474065.5
ENST00000485112.1
ENST00000541377.5
CDS CAA 72 bp GCATCTCGAACCTGGCTGTTTGGATCTCCAAGTAAGTaGCATATATGTGGCACAATCTTGCTTAGTGTTAAA +
Preference number: 6 (lower is better)
Translates to: ASRTWLFGSPSK*HICGTILLSVK
Trigger: TTTAACACTAAGCAAGATTGTGCCACATATATGCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000474065.5
ENST00000485112.1
ENST00000541377.5
CDS CAA 72 bp GGATCTCCAAGTAAGTTGCATATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGTGCTCCAGAGCTGAAA +
Preference number: 6 (lower is better)
Translates to: GSPSKLHICGTI*LSVKVCAPELK
Trigger: TTTCAGCTCTGGAGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATGCAACTTACTTGGAGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474065.5
CDS CAA 90 bp TTTATTGCTGCATCTCGAACCTGGCTGTTTGGATCTCCAAGTAAGTaGCATATATGTGGCACAATCTTGCTTAGTGTTAAAGTCTGTGCT +
Preference number: 6 (lower is better)
Translates to: FIAASRTWLFGSPSK*HICGTILLSVKVCA
Trigger: AGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATGCAACTTACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGCAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000474065.5
ENST00000485112.1
ENST00000541377.5
CDS CAA 90 bp TGGCTGTTTGGATCTCCAAGTAAGTTGCATATATGTGGCACAATCTaGCTTAGTGTTAAAGTCTGTGCTCCAGAGCTGAAAACAAAAGGA +
Preference number: 6 (lower is better)
Translates to: WLFGSPSKLHICGTI*LSVKVCAPELKTKG
Trigger: TCCTTTTGTTTTCAGCTCTGGAGCACAGACTTTAACACTAAGCAAGATTGTGCCACATATATGCAACTTACTTGGAGATCCAAACAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474065.5
CDS GCA 72 bp GTGGAAACCCCAGTAACATTTTCTGGCTTCTATTCTTaGTTCGGAATCAGCATCATGTATTCCCTTCTTTAT +
Preference number: 6 (lower is better)
Translates to: VETPVTFSGFYS*FGISIMYSLLY
Trigger: ATAAAGAAGGGAATACATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGGGTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS CAA 72 bp TTTCAGGATTGCAACTTTGACCTTGAGGTTTGGAGTTaGAGTTTGATCCACAATAAATCTCATCAAAATGTT +
Preference number: 6 (lower is better)
Translates to: FQDCNFDLEVWS*SLIHNKSHQNV
Trigger: AACATTTTGATGAGATTTATTGTGGATCAAACTCAAACTCCAAACCTCAAGGTCAAAGTTGCAATCCTGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5