RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CLASP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000074054

Ensembl transcript IDs: ENST00000263710.8, ENST00000397587.7, ENST00000409078.8, ENST00000418989.5, ENST00000430234.5, ENST00000449975.1, ENST00000452274.6, ENST00000455322.6, ENST00000463621.3, ENST00000472776.1, ENST00000474065.5, ENST00000480007.1, ENST00000485112.1, ENST00000491646.1, ENST00000541377.5

Found 1533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCTGCGTGCCCCGAGGACCGGCTGCACCCTGCCCAGACCCTGGCTaGAGGGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCC +
Preference number: 1 (lower is better)
Translates to: SCVPRGPAAPCPDPG*RGGSSLEEAGSQPA
Trigger: GGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCCCTGCAGCCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGCACGCAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp CAGGGTCTAGGGGGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTC +
Preference number: 1 (lower is better)
Translates to: QGLGGDGGLGALPVR*WRHASLLGAAAAVF
Trigger: GAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGACCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 90 bp GGGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAGATTGAGGCC +
Preference number: 1 (lower is better)
Translates to: GRRWARRPPSEVVAA*ESPRRGGSSFQIEA
Trigger: GGCCTCAATCTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp GGTCTAGGGGGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAGA +
Preference number: 1 (lower is better)
Translates to: GLGGDGGLGALPVRW*RHASLLGAAAAVFR
Trigger: TCTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp GGCCCGTGGCATCGCCGCAGGTCCGGGAAGCACACACAGTGTACTTaGAGGAAGCTGCGTGCCCCGAGGACCGGCTGCACCCTGCCCAGA +
Preference number: 1 (lower is better)
Translates to: GPWHRRRSGKHTQCT*RKLRAPRTGCTLPR
Trigger: TCTGGGCAGGGTGCAGCCGGTCCTCGGGGCACGCAGCTTCCTTCAAGTACACTGTGTGTGCTTCCCGGACCTGCGGCGATGCCACGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 90 bp TGTCGGTGGAGTCGATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTGAAAGCCAGGGCAGTCGGCCTCCAG +
Preference number: 1 (lower is better)
Translates to: CRWSRLGRAGRRLSG*TPNSTLKARAVGLQ
Trigger: CTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGACTCCACCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR TCA 90 bp GGCGGCATGCGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGACGTGATTGTATCTCTAAGTCAGGAG +
Preference number: 1 (lower is better)
Translates to: GGMRVSSARRQQFSD*GQETCDVIVSLSQE
Trigger: CTCCTGACTTAGAGATACAATCACGTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp AGCTCTGGGGTAGGGACCTTGTCGGTGGAGTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAGC +
Preference number: 1 (lower is better)
Translates to: SSGVGTLSVESIRES*KETVRVHSQFYAES
Trigger: GCTTTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGACTCCACCGACAAGGTCCCTACCCCAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR TCA 90 bp CTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGT +
Preference number: 1 (lower is better)
Translates to: LVLTGQPMKGVGKGL*EAPPIASRSTQETG
Trigger: ACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
3UTR TCA 90 bp GGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAA +
Preference number: 1 (lower is better)
Translates to: GELEGDCQGALPILR*KPGQSASSLDMTSK
Trigger: TTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR CCA 90 bp CAGGGCAGAGGGGTCTGTGGAAATGATGTTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTC +
Preference number: 1 (lower is better)
Translates to: QGRGVCGNDVKNHVL*HPASAFSPSSCSGL
Trigger: GAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCCTCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 90 bp AGGGTCAGGGCAGAGGGGTCTGTGGAAATGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTG +
Preference number: 1 (lower is better)
Translates to: RVRAEGSVEMMLRIT*SGTQPLLSVLAVAV
Trigger: CACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCCTCTGCCCTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp GGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCCCATGACAACAGTGTTCCCAAGGAT +
Preference number: 1 (lower is better)
Translates to: GNKLVLNLNHRVAQR*GSWQSPHDNSVPKD
Trigger: ATCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp CACACACACACACACACACACACACACACACACACGTCAGCACCCTaGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGCCC +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHTSAP*LYCSYALWGLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp GGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTaGGGTACCTTCTGGGAGTCAAAGAGCTCAAGGAGAAAGGTCTTT +
Preference number: 1 (lower is better)
Translates to: GRPAMFEILSKYTGD*GTFWESKSSRRKVF
Trigger: AAAGACCTTTCTCCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp CAATTCTACGCTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCGTTTGTTAAAAGGCCATCTTCAGAC +
Preference number: 1 (lower is better)
Translates to: QFYAESQGSRPPVWI*QAKFPAFVKRPSSD
Trigger: GTCTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR CCA 90 bp CACACACACACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCCATGTTTCCAAATCAACATCAGTCT +
Preference number: 1 (lower is better)
Translates to: HTHTSAPWLYCSYAL*GLHFQPMFPNQHQS
Trigger: AGACTGATGTTGATTTGGAAACATGGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 90 bp ATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGGAGAAAGGTCTTTCTAACTGCATTA +
Preference number: 1 (lower is better)
Translates to: MFEILSKYTGDWGTF*ESKSSRRKVFLTAL
Trigger: TAATGCAGTTAGAAAGACCTTTCTCCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 90 bp TGGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTaGACTGCAATAGCAAATACGTTATTAGAATTAATCTCAAAAGAA +
Preference number: 1 (lower is better)
Translates to: WHPASAFSPSSCSGL*TAIANTLLELISKE
Trigger: TTCTTTTGAGATTAATTCTAATAACGTATTTGCTATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp TCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTaGGAAGTCAGAACTAAGATGGTAAAGATGCCATTTACCAGATTA +
Preference number: 1 (lower is better)
Translates to: SSLSRLFLALNPTLN*EVRTKMVKMPFTRL
Trigger: TAATCTGGTAAATGGCATCTTTACCATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 90 bp CAGCGTTTGTTAAAAGGCCATCTTCAGACTGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATA +
Preference number: 1 (lower is better)
Translates to: QRLLKGHLQTVLAKT*FPFLVGLRTQLKDI
Trigger: TATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGATGGCCTTTTAACAAACGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 2 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLEVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSKNHVL*HPASAF
Trigger: GAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: GRQQLGGSRESARPAPQWKNHVL*HPASAF
Trigger: GAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAGGCCAAGAGACCTGTaGCGTGATTGTATCTCTAAG +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLRPRDL*RDCISK
Trigger: CTTAGAGATACAATCACGTCACAGGTCTCTTGGCCT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCC +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLCSYAL*GLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 2 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 2 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAATCCCACATTAAACTaGGAAGTCAGAACTAAGATG +
Preference number: 2 (lower is better)
Translates to: GRQQLGGSRESARPAPQWNPTLN*EVRTKM
Trigger: CATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAATCCCACATTAAACTaGGAAGTCAGAACTAAGATG +
Preference number: 2 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSNPTLN*EVRTKM
Trigger: CATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 2 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 2 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCTAATCCTGTTTTTCTaGAATCTGCTACACCTCATA +
Preference number: 2 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLLILFF*NLLHLI
Trigger: TATGAGGTGTAGCAGATTGCAGAAAAACAGGATTAG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 2 (lower is better)
Translates to: VDREAETGLGALLFCVLFSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: VDREAETGLGALLFCVLFLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 2 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIRRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 2 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 2 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 2 (lower is better)
Translates to: VDREAETGLGALLFCVLFRRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 2 (lower is better)
Translates to: LIVINICGPPCTDWAADEVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTLAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 2 (lower is better)
Translates to: VDREAETGLGALLFCVLFIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: IVISSLSRLFLALNPTLNRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 2 (lower is better)
Translates to: DVIVSLSQETEDWASDIQPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 2 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 2 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTTTTGTATGAAGACTaGAATACAGGCCTTGCTTCC +
Preference number: 2 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRVLYED*NTGLAS
Trigger: GGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 2 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACAGTGGGCTCTGCACTaGAATAGCAAATACGTTATT +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVQWALH*NSKYVI
Trigger: AATAACGTATTTGCTATTGCAGTGCAGAGCCCACTG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 2 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 2 (lower is better)
Translates to: IRESWKETVRVHSQFYAEVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: TKMVKMPFTRLTETMLELLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 2 (lower is better)
Translates to: IRESWKETVRVHSQFYAESSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR CCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 2 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CAA 90 bp AGATTAACTGAGACCATGTTAGAACTGAACGGCTTAGGCAGAACTTaGAGGGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTA +
Preference number: 2 (lower is better)
Translates to: RLTETMLELNGLGRT*RGGNKLVLNLNHRV
Trigger: TACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCCGTTCAGTTCTAACATGGTCTCAGTTAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGTTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: TKMVKMPFTRLTETMLELLAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 2 (lower is better)
Translates to: TKMVKMPFTRLTETMLELSIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CCA 90 bp ACTAAGATGGTAAAGATGCCATTTACCAGATTAACTGAGACCATGTTAGAACTGTTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 2 (lower is better)
Translates to: TKMVKMPFTRLTETMLELFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...CAGTTCTAACATGGTCTCAGTTAATCTGGTAAATGGCATCTTTACCATCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 2 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACCTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 2 (lower is better)
Translates to: IVISSLSRLFLALNPTLNLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATTCTTCAGACTGTTCTTaGCAAGACTTGATTCCCATT +
Preference number: 2 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYSSDCS*QDLIPI
Trigger: AATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGA...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR CCA 72 bp GGGGGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTCCTCGGCGCGGCGGCA +
Preference number: 3 (lower is better)
Translates to: GGDGGLGALPVR*WRHASLLGAAA
Trigger: TGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp GGCGACGGTGGGCTCGGCGCCCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTCGGCGCGGCGGCAGCA +
Preference number: 3 (lower is better)
Translates to: GDGGLGALPVRW*RHASLLGAAAA
Trigger: TGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp AGGCAGCTGCAGCTGTCAGGGTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGTGAGGTGGTGGCGGCA +
Preference number: 3 (lower is better)
Translates to: RQLQLSGSRGRR*ARRPPSEVVAA
Trigger: TGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGACCCTGACAGCTGCAGCTGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 72 bp TGGGCTCGGCGCCCTCCCAGTGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAG +
Preference number: 3 (lower is better)
Translates to: WARRPPSEVVAA*ESPRRGGSSFQ
Trigger: CTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGAGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGTGTTCTGTTTTTCATaGGAACAGGGGCCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: GRQQLGGSRESARPAPQWVFCFS*EQGPCR
Trigger: CCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACAC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp GGTAAGCTAGTGAGGCGCATAGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGGAAGCACACACAGTGT +
Preference number: 3 (lower is better)
Translates to: GKLVRRIEKAGP*HRRRSGKHTQC
Trigger: ACACTGTGTGTGCTTCCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTCTATGCGCCTCACTAGCTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 3 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCTCTCTAGGCTTTTCTaGGCTCTTAATCCCACATTA +
Preference number: 3 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSLSRLF*ALNPTL
Trigger: TAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTTCTTGCCAAGACTaGATTCCCATTTTTAGTAGG +
Preference number: 3 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSCSCQD*IPIFSR
Trigger: CCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 3 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 72 bp GAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATG +
Preference number: 3 (lower is better)
Translates to: EGDCQGALPILR*KPGQSASSLDM
Trigger: CATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR TCA 72 bp CGAGTCTCCTCGGCGCGGCGGCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGACGTGATTGTATCTCTA +
Preference number: 3 (lower is better)
Translates to: RVSSARRQQFSD*GQETCDVIVSL
Trigger: TAGAGATACAATCACGTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTGCCGCCGCGCCGAGGAGACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp GTAGGGACCTTGTCGGTGGAGTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTGCACTCCCAATTCTAC +
Preference number: 3 (lower is better)
Translates to: VGTLSVESIRES*KETVRVHSQFY
Trigger: GTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGACTCCACCGACAAGGTCCCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR CAA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: INICGPPCTDWAADEGGGERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR CAA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR TCA 72 bp TTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCCCATGACAACAGTGTT +
Preference number: 3 (lower is better)
Translates to: LVLNLNHRVAQR*GSWQSPHDNSV
Trigger: AACACTGTTGTCATGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 72 bp CTCTGGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCAATAGCAAATACGTTA +
Preference number: 3 (lower is better)
Translates to: LWHPASAFSPSS*SGLCTAIANTL
Trigger: TAACGTATTTGCTATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR GCA 72 bp GCAGAGGGGTCTGTGGAAATGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTGCTTTCAGTCCTAGCA +
Preference number: 3 (lower is better)
Translates to: AEGSVEMMLRIT*SGTQPLLSVLA
Trigger: TGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp GGGGTCTGTGGAAATGATGTTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGC +
Preference number: 3 (lower is better)
Translates to: GVCGNDVKNHVL*HPASAFSPSSC
Trigger: GCAACTGCTAGGACTGAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACATCATTTCCACAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 3 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTCTGGGGTAGGGACCTaGTCGGTGGAGTCGATTAGG +
Preference number: 3 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSGVGT*SVESIR
Trigger: CCTAATCGACTCCACCGACAAGGTCCCTACCCCAGA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 72 bp GCTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCGTTTGTTAAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: AESQGSRPPVWI*QAKFPAFVKRP
Trigger: TGGCCTTTTAACAAACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR CCA 72 bp ACACACACACACACACACACACACACGTCAGCACCCTaGCTTTACTGTTCCTATGCACTATGGGGCCTTCAT +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTSAP*LYCSYALWGLH
Trigger: ATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGATCTTCAGACTGTTCTaGCCAAGACTTGATTCCCAT +
Preference number: 3 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRIFRLF*PRLDSH
Trigger: ATGGGAATCAAGTCTTGGCAAGAACAGTCTGAAGAT...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACAAAATTCCCAGCGTTaGTTAAAAGGCCATCTTCAG +
Preference number: 3 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVQNSQR*LKGHLQ
Trigger: CTGAAGATGGCCTTTTAACAAACGCTGGGAATTTTG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGTAATACCCAACCCCTaGAAACGCGTCCCTCAAGTT +
Preference number: 3 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTVIPNP*KRVPQV
Trigger: AACTTGAGGGACGCGTTTCAAGGGGTTGGGTATTAC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CCA 72 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCCATGTTTCCAAATCAA +
Preference number: 3 (lower is better)
Translates to: TSAPWLYCSYAL*GLHFQPMFPNQ
Trigger: TTGATTTGGAAACATGGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 72 bp AACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGACCATACGCACAAGAAA +
Preference number: 3 (lower is better)
Translates to: NLKIYHLSWCQL*KGPHTDHTHKK
Trigger: TTTCTTGTGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATATATCTTTAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
3UTR-3UTR CAA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAG +
Preference number: 3 (lower is better)
Translates to: IVISSLSRLFLALNPTLNERHHR*LLGLHK
Trigger: CTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR-3UTR CAA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTGTTCTTGCCAAGACTaGATTCCCATTTTTAGTAGG +
Preference number: 3 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGCSCQD*IPIFSR
Trigger: CCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR TCA 72 bp TCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTaGGAAGTCAGAACTAAGATGGTAAAGATGCCATTT +
Preference number: 3 (lower is better)
Translates to: SRLFLALNPTLN*EVRTKMVKMPF
Trigger: AAATGGCATCTTTACCATCTTAGTTCTGACTTCTCAGTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGAGCAGCGGGGGTCTTaGGCCCTGGCCAGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLEQRGS*ALASPV
Trigger: TACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTTGAAGGAAGCTGCGTaGCCCGAGGACCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLLKEAA*PEDRLH
Trigger: GTGCAGCCGGTCCTCGGGGCACGCAGCTTCCTTCAA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLSWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLTAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLSTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGAAAAGGGAGGTGGGTaGTTCGCTAACCCGTCGGCA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLEKGGG*FANPSA
Trigger: TGCCGACGGGTTAGCGAAGCACCCACCTCCCTTTTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLTWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTTTTCCTGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLFSWGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGGCACGTCTCGAAGCTaGTCCATGTCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSGTSRS*SMSSSN
Trigger: GTTCGATGACGACATGGAGCAGCTTCGAGACGTGCC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLRRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWTRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGACCGGCTGCCAGGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLDRLPG*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCCTGGCAGCCGGTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSKELQQ*LLCDPL
Trigger: GAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCTTTGCCGTCTTGTaGGGATCCGACCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSFAVL*GSDLRM
Trigger: CATCCTTAGGTCGGATCCGCACAAGACGGCAAAGCT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263710.8
ENST00000409078.8
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGCTTTGCCGTCTTGTaGGGATCCGACCTAAGGATG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLSFAVL*GSDLRM
Trigger: CATCCTTAGGTCGGATCCGCACAAGACGGCAAAGCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263710.8
ENST00000409078.8
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGGTTGTGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWGCAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCACAACC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCAGGAGACTGAAGACTaGGCGAGTGACATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWQETED*ASDIQG
Trigger: GCCTTGAATGTCACTCGCCCAGTCTTCAGTCTCCTG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGGATCGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLGSLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLPPVWI*QAKFPA
Trigger: CGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGG...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAGTTCTTGGCCAACCTaGAATCGTTTCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSSSWPT*NRFPTS
Trigger: GGATGTGGGGAAACGATTGCAGGTTGGCCAAGAACT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGCTGCATCTCGAACCTaGCTGTTTGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSAASRT*LFGSPS
Trigger: ACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTGCCTCTTTGTTCGCTaGAGGTTACTAAGAGCCTGT +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLCLFVR*RLLRAC
Trigger: ACAGGCTCTTAGTAACCTTCAGCGAACAAAGAGGCA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGTCGAGGGATACGGCTaGTCCGTGCTAATCCTATTC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLVEGYG*SVLILF
Trigger: GAATAGGATTAGCACGGAGCAGCCGTATCCCTCGAC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTCACACATGTGTAGGGTaGACGCACAAACACACACAA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSHTCVG*THKHTQ
Trigger: TTGTGTGTGTTTGTGCGTGCACCCTACACATGTGTG...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSADLDR*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCGATCCAGATCTGC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACGCCCAGCCCCGCAGTaGAGCAGCGGGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYARPAPQ*SSGGLG
Trigger: CCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGCCCAGCCCCGCAGTaGAGCAGCGGGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQRPAPQ*SSGGLG
Trigger: CCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTGAAAGGAGTCCCTTGTaGCATCTAGAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSERSPL*HLEPFE
Trigger: TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTC...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGAC +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLQQFSD*GQETCD
Trigger: GTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTG...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQEVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGCCCCGAGGACCGGCTaGACCCTGCCCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTAPRTG*TLPRPW
Trigger: CCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAGGAGACTTTGGATTTaGCACTGGCTGCTGCGTTCA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLRRLWI*HWLLRS
Trigger: TGAACGCAGCAGCCAGTGCCAAATCCAAAGTCTCCT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTGCCAATCGTATTGCTTaGAGAGCCCACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLANRIA*RAHTGV
Trigger: AACACCAGTGTGGGCTCTCCAAGCAATACGATTGGC...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQSRGRR*ARRPPS
Trigger: ACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGAGCAGCGGGGGTCTTaGGCCCTGGCCAGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEEQRGS*ALASPV
Trigger: TACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCGCCCAGCCCCGCAGTaGAGCAGCGGGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRPAPQ*SSGGLG
Trigger: CCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEEKAGP*HRRRSG
Trigger: CCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: WRKQGVSPPSPAVEQRGSRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...AGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGESGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMREVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEEVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTTATGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLLWESL*ASRVFI
Trigger: TATGAAGACTCTGGAAGCCCACAAAGACTCCCATAA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIALPVR*WRHASL
Trigger: GAGACTCGCATGCCGCCACCACCTCACTGGGAGGGC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLSRGRR*ARRPPS
Trigger: ACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAAAACTCTCTTGCTATaGGGGTCAGCAAACATCCGA +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLKTLLL*GSANIR
Trigger: TCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTTT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTCAGGGGGCTGGTCCTaGTGCTGGTGTGTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQSGGWS*CWCVGR
Trigger: CCTCCCGACACACCAGCAGCAGGACCAGCCCCCTGA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGGCTGGTCCTGCTGCTaGTGTGTCGGGAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLGWSCC*CVGRAS
Trigger: GGACGCCCTCCCGACACACCAGCAGCAGGACCAGCC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGAGCAGCGGGGGTCTTaGGCCCTGGCCAGTCCGGTA +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVEQRGS*ALASPV
Trigger: TACCGGACTGGCCAGGGCCCAAGACCCCCGCTGCTC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMREKAGP*HRRRSG
Trigger: CCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAGACTTCTGTTTGTCTaGGAAATAGTCTATCAGTTC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLRLLFV*EIVYQF
Trigger: GAACTGATAGACTATTTCTCAGACAAACAGAAGTCT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTCTCCAAAAACATACTaGAAACTCTCTTGCTATGAG +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWSPKTY*KLSCYE
Trigger: CTCATAGCAAGAGAGTTTTCAGTATGTTTTTGGAGA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGTCAGGCATCCCTAAATaGTGCCATACATTTATCTTA +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLSGIPK*CHTFIL
Trigger: TAAGATAAATGTATGGCATCATTTAGGGATGCCTGA...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSFCNT*ARQDSM
Trigger: CATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGGCTTGTATCTCGGCTaGTCTCACGGCTGGTATCGC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPGLYLG*SHGWYR
Trigger: GCGATACCAGCCGTGAGAGCAGCCGAGATACAAGCC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGCAAGGCAAGGCAGCTaGAGCTGTCAGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKARQGS*SCQGLG
Trigger: CCCTAGACCCTGACAGCTGCAGCTGCCTTGCCTTGC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTGAAGGAAGCTGCGTaGCCCGAGGACCGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLKEAA*PEDRLH
Trigger: GTGCAGCCGGTCCTCGGGGCACGCAGCTTCCTTCAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGAGCAGCGGGGGTCTTGAAATTGTTGATCAAATaGAAAGGAGTCCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: EEAGSQPAQPRSGAAGVLKLLIK*KGVPCD
Trigger: GTCACAAGGGACTCCTTTCCATTTGATCAACAATTT...CAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGCAGCAGCTTGGAGGAAGCAGGGAGTCAGCCCGCCCAGCCCCGCAGTGGTATCAACAAAAGACCTaGTCCTGCTATATTTTGAGC +
Preference number: 4 (lower is better)
Translates to: GRQQLGGSRESARPAPQWYQQKT*SCYILS
Trigger: GCTCAAAATATAGCAGGACCAGGTCTTTTGTTGATA...CCACTGCGGGGCTGGGCGGGCTGACTCCCTGCTTCCTCCAAGCTGCTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQEKAGP*HRRRSG
Trigger: CCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGAGAGGGCAGTCACGATaGCTCCCTCCCAGCAGACGT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQRGQSR*LPPSRR
Trigger: ACGTCTGCTGGGAGGGAGTCATCGTGACTGCCCTCT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGAGAGTAAGAGCGCCTaGGAGCCTTGTGGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAESKSA*EPCGRE
Trigger: CTCCCTCCCACAAGGCTCTCAGGCGCTCTTACTCTC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTTTCCTGGGGAACTTaGCCGGCTGCCAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQFSWGT*PAARLG
Trigger: TCCCAGCCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACGGACAGGATGTCCATaGCCAGCAGAACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPRTGCP*PAEPPC
Trigger: ACAAGGTGGTTCTGCTGGGCATGGACATCCTGTCCG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCAAGGCAAGGCAGCTaGAGCTGTCAGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGARQGS*SCQGLG
Trigger: CCCTAGACCCTGACAGCTGCAGCTGCCTTGCCTTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGCCCCGAGGACCGGCTaGACCCTGCCCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEAPRTG*TLPRPW
Trigger: CCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGCTTTGCCGTCTTGTaGGGATCCGACCCTCCGCTT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSFAVL*GSDPPL
Trigger: AAGCGGAGGGTCGGATCCGCACAAGACGGCAAAGCT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000455322.6
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGETWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGACCCCTGACTCATGCTaGGTCGAGGGATACGGCTGC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGTPDSC*VEGYGC
Trigger: GCAGCCGTATCCCTCGACCCAGCATGAGTCAGGGGT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQTAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRTAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVLPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACTCCCAGTGAGGTGGTaGCGGCATGCGAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAELPVRW*RHASLL
Trigger: GAGGAGACTCGCATGCCGCCACCACCTCACTGGGAG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAAGCTGCTGCAGAGCTaGAAGGCGTCGTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEKLLQS*KASCPK
Trigger: CTTCGGGCACGACGCCTTTCAGCTCTGCAGCAGCTT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTTTTCCTGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRFSWGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTTTTCCTGGGGAACTTaGCCGGCTGCCAGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLFSWGT*PAASTS
Trigger: GCTGGTGCTGGCAGCCGGTCAAGTTCCCCAGGAAAA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTGGGGCAGAGCACCTTaGTGCACTGCTCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFWGRAP*CTAPGG
Trigger: TCCACCCGGAGCAGTGCATCAAGGTGCTCTGCCCCA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCGTGGTGTCAGCTGTaGAAGGGGCCCCACACAGAC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESWCQL*KGPHTD
Trigger: GTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACTCCCAATTCTACGCTaGAAGCCAGGGCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVLPILR*KPGQSA
Trigger: GGCCGACTGCCCTGGCTTTCAGCGTAGAATTGGGAG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAILAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCGGCGCCCTCCCAGTaGGGTGGTGGCGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSAPSQ*GGGGMR
Trigger: TCGCATGCCGCCACCACCTCACTGGGAGGGCGCCGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCACTCCCAGAGCTTTaGCGTCTTGTGCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGALPEL*RLVRIR
Trigger: TCGGATCCGCACAAGACGGCAAAGCTCTGGGAGTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGESGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGCACGTCTCGAAGCTaGTCCATGTCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGTSRS*SMSSSN
Trigger: GTTCGATGACGACATGGAGCAGCTTCGAGACGTGCC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGCAAGGCAAGGCAGCTaGAGCTGTCAGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLARQGS*SCQGLG
Trigger: CCCTAGACCCTGACAGCTGCAGCTGCCTTGCCTTGC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQTWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQTWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCCAAACCGATCAAGTaGAGGAAAGCCCCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVPKPIK*RKAPSR
Trigger: CCTGCTCGGGGCTTTCCTCCACTTGATCGGTTTGGG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGAAAAGGCAGGCCCGTaGCATCGCCGCAGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTEKAGP*HRRRSG
Trigger: CCCGGACCTGCGGCGATGCCACGGGCCTGCCTTTTC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
3UTR CAA 72 bp AGGGGGTGGGGAAAGGTCTCTGAGAGGCACCACCGATaGCTTCTAGGTCTACACAAGAGACAGGTACTGCCA +
Preference number: 4 (lower is better)
Translates to: RGWGKVSERHHR*LLGLHKRQVLP
Trigger: TGGCAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGATCGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGGSLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESFCNT*ARQDSM
Trigger: CATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAAGTTCTTGGCCAACCTaGAATCGTTTCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSSWPT*NRFPTS
Trigger: GGATGTGGGGAAACGATTGCAGGTTGGCCAAGAACT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAGCACTGTGCCGATCTaGGCCTTGAACCGATCCTGC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLSTVPI*ALNRSC
Trigger: GCAGGATCGGTTCAAGGCGCAGATCGGCACAGTGCT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCGGGGGTCTTGGGCCCTGGCCAGTCCGGTAGACAGGGAGGCAGAGACAGGCTTAATGTATTTCAGGATTaGAACTTTGACCTTGAGGTT +
Preference number: 4 (lower is better)
Translates to: AGVLGPGQSGRQGGRDRLNVFQD*NFDLEV
Trigger: AACCTCAAGGTCAAAGTTGCAATCCTGAAATACATT...AAGCCTGTCTCTGCCTCCCTGTCTACCGGACTGGCCAGGGCCCAAGACCCCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYASGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGCACGTCTCGAAGCTaGTCCATGTCGTCATCGAAC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGGTSRS*SMSSSN
Trigger: GTTCGATGACGACATGGAGCAGCTTCGAGACGTGCC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAGCACCTTGATGCACTaGTCCGGGTGGATGGAACTG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSTLMH*SGWMEL
Trigger: CAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKFSPSS*SGLCTA
Trigger: TGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAGGTGGTGGCGGCATaGGAGTCTCCTCGGCGCGGC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADEVVAA*ESPRRG
Trigger: GCCGCGCCGAGGAGACTCGCATGCCGCCACCACCTC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAACTTGGATCCAAGGGTaGATGAACCAAGCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAETWIQG*MNQAGG
Trigger: CCCGCCGGCTTGGTTCATCCACCCTTGGATCCAAGT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGTTGTGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGCAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCACAACC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACAGGAGACTGAAGACTaGGCGAGTGACATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEQETED*ASDIQG
Trigger: GCCTTGAATGTCACTCGCCCAGTCTTCAGTCTCCTG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSRGRR*ARRPPS
Trigger: ACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACGCCCAGCCCCGCAGTaGAGCAGCGGGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTRPAPQ*SSGGLG
Trigger: CCCAAGACCCCCGCTGCTCCACTGCGGGGCTGGGCG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
3UTR CAA 72 bp AGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTaGTCGGTGGAGTCGATTAGGGAGAGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RIPLHGSSGVGT*SVESIRESWKE
Trigger: CTCCTTCCAGCTCTCCCTAATCGACTCCACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGATCCAAGGGTGGATaGACCAAGCCGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTGSKGG*TKPAGG
Trigger: ACCACCCGCCGGCTTGGTTCATCCACCCTTGGATCC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAETDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTTDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGATGAGCGGTCTGACTaGGGCAGAGACACTATGCTG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVDERSD*GRDTML
Trigger: CAGCATAGTGTCTCTGCCTCAGTCAGACCGCTCATC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACGATTTAGACTCTCTTaGGAGCTGGAAGATGAGCGG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGERFRLS*ELEDER
Trigger: CCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACGATTTAGACTCTCTTaGGAGCTGGAAGATGAGCGG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKRFRLS*ELEDER
Trigger: CCGCTCATCTTCCAGCTCTCAAGAGAGTCTAAATCG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEEGPSR*HRFGTN
Trigger: GTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGGATCGCTGGGACTGTaGAACCACTTTAGCGCGACT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLGSLGL*NHFSAT
Trigger: AGTCGCGCTAAAGTGGTTTCACAGTCCCAGCGATCC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGGCCTAGTGGTTCGCTaGGGAGGAAGAGAGACTCTA +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTGLVVR*GGRETL
Trigger: TAGAGTCTCTCTTCCTCCTCAGCGAACCACTAGGCC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTGGGGACCATGCGTGTaGACACAGTGCCAACATAAC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQWGPCV*TQCQHN
Trigger: GTTATGTTGGCACTGTGTTCACACGCATGGTCCCCA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGTTTTTCGTTACTGTTaGCGCTGCGGACCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQVFRYC*RCGPES
Trigger: GCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAAC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCCGGCCAATCGTATTaGTTGGAGAGCCCACACTGG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSGQSY*LESPHW
Trigger: CCAGTGTGGGCTCTCCAAGCAATACGATTGGCCGGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAGCACCTTGATGCACTaGTCCGGGTGGATGGAACTG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSTLMH*SGWMEL
Trigger: CAGTTCCATCCACCCGGAGCAGTGCATCAAGGTGCT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQFSPSS*SGLCTA
Trigger: TGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGCTTTGCCGTCTTGTaGGGATCCGACCTGAGTCCA +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSFAVL*GSDLSP
Trigger: TGGACTCAGGTCGGATCCGCACAAGACGGCAAAGCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGGCTGCTCTCACGGCTaGTATCGCGGCTGCACCCCT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLGCSHG*YRGCTP
Trigger: AGGGGTGCAGCCGCGATACCAGCCGTGAGAGCAGCC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGGTTGTGCAGGAGTTTaGTGGCACCATCCTGGAATG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRGCAGV*WHHPGM
Trigger: CATTCCAGGATGGTGCCACCAAACTCCTGCACAACC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAGCCAATCGTATTGCTTaGAGAGCCCACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEANRIA*RAHTGV
Trigger: AACACCAGTGTGGGCTCTCCAAGCAATACGATTGGC...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAETLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAACCCTGCAGCAAGCCTaGGATGATGTCGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVTLQQA*DDVDKE
Trigger: CTCCTTGTCGACATCATCCCAGGCTTGCTGCAGGGT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGAGCTGCTGTTGCTGTTaGTGGTCTGGGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSCCCC*WSGPSL
Trigger: TAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYASIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATGTTCTGTTTTTCATTaGAACAGGGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAICSVFH*NRGPAG
Trigger: CCCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGTATTCTTCCTGGCTaGCCAAGCCCAAACCGATCT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVGILPG*PSPNRS
Trigger: AGATCGGTTTGGGCTTGGCCAGCCAGGAAGAATACC...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACAGGCTTCTTGCTCCTaGAGTCTCCTAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEQASCS*SLLTAK
Trigger: CTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGCCTG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGCCTCCCGCACTACCTaGGACCGCAGGTCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLASRTT*DRRSLA
Trigger: TGCTAAGGACCTGCGGTCTCAGGTAGTGCGGGAGGC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGCGGAGGCTGGGTGTTaGGTAGTGAGGTCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVAEAGC*VVRSCY
Trigger: ATAACAAGACCTCACTACTCAACACCCAGCCTCCGC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSCRRC*WHLSRG
Trigger: ACCCCTACTCAGATGCCATCAACACCTACGACAAGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTCTTGTCGTAGGTGTTaGTGGCATCTGAGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQSCRRC*WHLSRG
Trigger: ACCCCTACTCAGATGCCATCAACACCTACGACAAGA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAAGGAGCTGCAGCAATaGCTCCTTTGCGATCCTCTC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLKELQQ*LLCDPL
Trigger: GAGAGGATCGCAAAGGAGTCATTGCTGCAGCTCCTT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGGCCAAGAGACCTGTaGCGTGATTGTATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKRPRDL*RDCISK
Trigger: CTTAGAGATACAATCACGTCACAGGTCTCTTGGCCT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQQQFSD*GQETCD
Trigger: GTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGTTTTTCGTTACTGTTaGCGCTGCGGACCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTVFRYC*RCGPES
Trigger: GCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAAC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACATGGTCTGGTCATaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGENMVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCATGACCAGACCATGTT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAAGCAGAGTTTGGTCCTaGTCCCTCACAGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISRVWS*SLTESL
Trigger: TAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCT...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGERTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVVQVL*FSAEVT
Trigger: AGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTGCACCCCTGACTCATaGTGGGTCGAGGGATACGGC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTCTPDS*WVEGYG
Trigger: GCCGTATCCCTCGACCCAGCATGAGTCAGGGGTGCA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGTGGTTGAGAACTTCTaGTACATCCTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGVVENF*YILSLP
Trigger: CGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCAC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAATGTCGACAAGGAGCTaGAGCAATGACTCCTTTGCG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAMSTRS*SNDSFA
Trigger: CGCAAAGGAGTCATTGCTGCAGCTCCTTGTCGACAT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAAGGAGACTGTCAGGGTaGACTCCCAATTCTACGCTG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAERRLSG*TPNSTL
Trigger: CAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCT...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQMLRIT*SGTQPL
Trigger: CAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACAT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQMLRIT*SGTQPL
Trigger: CAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACAT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAATGTTAAGAATCACGTaGTCTGGCACCCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAMLRIT*SGTQPL
Trigger: CAGAGGCTGGGTGCCAGAGCACGTGATTCTTAACAT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATACACACATGTGTAGGGTaGACGCACAAACACACACAA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIHTCVG*THKHTQ
Trigger: TTGTGTGTGTTTGTGCGTGCACCCTACACATGTGTG...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACCCGACGCACATTCCTaGAACAAAGGGGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVPDAHS*NKGVNK
Trigger: CTTGTTGACCCCTTTGTTGCAGGAATGTGCGTCGGG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGCAAGGCAAGGCAGCTaGAGCTGTCAGGGTCTAGGG +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGARQGS*SCQGLG
Trigger: CCCTAGACCCTGACAGCTGCAGCTGCCTTGCCTTGC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTGTACTTGAAGGAAGCTaGGTGCCCCGAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGVLEGS*VPRGPA
Trigger: AGCCGGTCCTCGGGGCACGCAGCTTCCTTCAAGTAC...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGCCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTTTAGCAGCAGAGTTTaGTCCTGCTCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQFSSRV*SCSLTE
Trigger: CTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTTTAGCAGCAGAGTTTaGTCCTGCTCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVFSSRV*SCSLTE
Trigger: CTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCTGCATCTCGAACCTaGCTGTTTGGATCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGAASRT*LFGSPS
Trigger: ACTTGGAGATCCAAACAGCCAGGTTCGAGATGCAGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQREDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQTRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGAATGCCACCATTCCTaGAGCCATATGAGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVECHHS*SHMSAQ
Trigger: CTGAGCGCTCATATGGCTCCAGGAATGGTGGCATTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGCCAATCGTATTGCTTaGAGAGCCCACACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRANRIA*RAHTGV
Trigger: AACACCAGTGTGGGCTCTCCAAGCAATACGATTGGC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYACCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGCTGCTGTTGCTGTTaGTGGTCTGGGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVSCCCC*WSGPSL
Trigger: TAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRSIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCGATTAGGGAGAGCTaGAAGGAGACTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSIRES*KETVRV
Trigger: CACCCTGACAGTCTCCTTCCAGCTCTCCCTAATCGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACTCTAGGGGGCGACGGTaGGCTCGGCGCCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNSRGRR*ARRPPS
Trigger: ACTGGGAGGGCGCCGAGCCCACCGTCGCCCCCTAGA...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGATAGTCCAGCATGCTTaGAGACAGACCCCCATGGGA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLIVQHA*RQTPMG
Trigger: TCCCATGGGGGTCTGTCTCCAAGCATGCTGGACTAT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTGGGGATTAGCAGCTTaGTCCATGATCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRWGLAA*SMIFSS
Trigger: GCTGCTAAAGATCATGGATCAAGCTGCTAATCCCCA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGACACTATGCTGTCTaGGTTCTTCAGGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRHYAV*VLQVGL
Trigger: CAGTCCCACCTGAAGAACTCAGACAGCATAGTGTCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLEGPSR*HRFGTN
Trigger: GTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAAGAGGGACCCAGTCGTTaGCACAGATTTGGTACTAAC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEEGPSR*HRFGTN
Trigger: GTTAGTACCAAATCTGTGTCAACGACTGGGTCCCTC...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTCGCGGCTGCACCCCTaGCTCATGCTGGGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSSRLHP*LMLGRG
Trigger: CCCTCGACCCAGCATGAGTCAGGGGTGCAGCCGCGA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACTCAGAGCAAACACTTaGGGCATCACTGTTGGCATC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLRANT*GITVGI
Trigger: GATGCCAACAGTGATGCCTCAAGTGTTTGCTCTGAG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATAGAAAGGAGTCCCTTGTaGCATCTAGAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAIERSPL*HLEPFE
Trigger: TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTC...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAICLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKCLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGGTGTTGATGGCATCTaGGTAGGGGTACGGGTTGTA +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQGVDGI*VGVRVV
Trigger: TACAACCCGTACCCCTACTCAGATGCCATCAACACC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLPPVWI*QAKFPA
Trigger: CGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGATCTTCTGTGCTTCATaGACTGCCATCTCAGGCATC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQIFCAS*TAISGI
Trigger: GATGCCTGAGATGGCAGTTCATGAAGCACAGAAGAT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGCGTGTAGCCCAGAGATaGGGGTCTTGGCAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVRVAQR*GSWQSP
Trigger: GGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACG...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAACAGCAGTTTTCAGATTaGGGCCAAGAGACCTGTGAC +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEQQFSD*GQETCD
Trigger: GTCACAGGTCTCTTGGCCTCAATCTGAAAACTGCTG...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTGGGGACCATGCGTGTaGACACAGTGCCAACATAAC +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQWGPCV*TQCQHN
Trigger: GTTATGTTGGCACTGTGTTCACACGCATGGTCCCCA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGTTTTTCGTTACTGTTaGCGCTGCGGACCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFVFRYC*RCGPES
Trigger: GCTCTCTGGTCCGCAGCGGCAACAGTAACGAAAAAC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACCTGTGTTTCAAAGATaGAATCTGGGGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEPVFQR*NLGNGN
Trigger: GTTGCCATTCCCCAGATTGCATCTTTGAAACACAGG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGTTCTTGGCCAACCTaGAATCGTTTCCCCACATCC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSSWPT*NRFPTS
Trigger: GGATGTGGGGAAACGATTGCAGGTTGGCCAAGAACT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTAGCAGAGTTTGGTCCTaGTCCCTCACAGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSRVWS*SLTESL
Trigger: TAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCAAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATCTGGCTTCTATTCTTaGTTCGGAATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPSGFYS*FGISIM
Trigger: CATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQVVQVL*FSAEVT
Trigger: AGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCAC...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAATTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAGGATTTGGCACTGGCTaGTGCGTTCACATCAATATC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAGFGTG*CVHINI
Trigger: GATATTGATGTGAACGCAGCAGCCAGTGCCAAATCC...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACCCTGGAGGCAAAGCTaGTGCAGAGCTGAAAGGCGT +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQPWRQS*CRAERR
Trigger: ACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCAGGG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGTGGTTGAGAACTTCTaGTACATCCTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLVVENF*YILSLP
Trigger: CGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCAC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAESTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATCGACGACTTTGGTCTaGATCTTGATGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSTTLV*ILMAAR
Trigger: CCTTGCTGCCATCAAGATGCAGACCAAAGTCGTCGA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADERRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTTCAGTCCTAGCAGTTaGAGTGGGCTCTGCACTGCA +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFFSPSS*SGLCTA
Trigger: TGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCACACATGTGTAGGGTaGACGCACAAACACACACAA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVHTCVG*THKHTQ
Trigger: TTGTGTGTGTTTGTGCGTGCACCCTACACATGTGTG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TTCCCATTTTTAGTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGCCCCGAGGACCGGCTaGACCCTGCCCAGACCCTGG +
Preference number: 4 (lower is better)
Translates to: FPFLVGLRTQLKDISPFVAPRTG*TLPRPW
Trigger: CCAGGGTCTGGGCAGGGTGCAGCCGGTCCTCGGGGC...CACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTACTAAAAATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGTACTTGAAGGAAGCTaGGTGCCCCGAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLVLEGS*VPRGPA
Trigger: AGCCGGTCCTCGGGGCACGCAGCTTCCTTCAAGTAC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTCACAGGCTTCTTCTTaGTCCTGGAGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGSQASS*SWSLLT
Trigger: TGTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR GCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTCACAGGCTTCTTCTTaGTCCTGGAGTCTCCTAACA +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQSQASS*SWSLLT
Trigger: TGTTAGGAGACTCCAGGAGCAAGAAGAAGCCTGTGA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCCCAGCAGACGTATCTaGGAGGTTGCCTCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFPSRRI*EVASLF
Trigger: GAACAAAGAGGCAACCTCCCAGATACGTCTGCTGGG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTTTAGCAGCAGAGTTTaGTCCTGCTCCCTCACAGAG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRFSSRV*SCSLTE
Trigger: CTCTGTGAGGGAGCAGGACCAAACTCTGCTGCTAAA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTTTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVLQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQLQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGEPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGACTCTCTTGAGAGCTaGAAGATGAGCGGTCTGACT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLDSLES*KMSGLT
Trigger: AGTCAGACCGCTCATCTTCCAGCTCTCAAGAGAGTC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQADLDR*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCGATCCAGATCTGC...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCAGATCTGGATCGCTaGGACTGTGAAACCACTTTA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGADLDR*DCETTL
Trigger: TAAAGTGGTTTCACAGTCCCAGCGATCCAGATCTGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCATTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYALVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTCTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRLEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQLEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACATGGGAACAGTTGGTaGGTGAGGTCAGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEHGNSW*VRSGGW
Trigger: CCAGCCCCCTGACCTCACCCACCAACTGTTCCCATG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGTCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCCACTCGCTCATTGTaGTTGGACAGCTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRSTRSL*LDSSFR
Trigger: TCTGAAAGAGCTGTCCAACCACAATGAGCGAGTGGA...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATCCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAACTGCTCCGGGTGGATaGAACTGGCCAGTGTGGACG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADETAPGG*NWPVWT
Trigger: CGTCCACACTGGCCAGTTCCATCCACCCGGAGCAGT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTATGCACTGCTCCGGGTaGATGGAACTGGCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGMHCSG*MELASV
Trigger: CACACTGGCCAGTTCCATCCACCCGGAGCAGTGCAT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTTTGCATGGAAGCTCTaGGGTAGGGACCTTGTCGGT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFFAWKL*GRDLVG
Trigger: ACCGACAAGGTCCCTACCCCAGAGCTTCCATGCAAA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTAAGAATCACGTGCTCTaGCACCCAGCCTCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFKNHVL*HPASAF
Trigger: GAAAGCAGAGGCTGGGTGCCAGAGCACGTGATTCTT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGCSYAL*GLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCACACGTCAGCACCCTaGCTTTACTGTTCCTATGCA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLHTSAP*LYCSYA
Trigger: TGCATAGGAACAGTAAAGCCAGGGTGCTGACGTGTG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGCTTCTTCTTGCTCCTaGAGTCTCCTAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGASSCS*SLLTAK
Trigger: CTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGAAGC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTTGCCGATCTGCGCCTTaGACCGATCCTGCAGCCGGG +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSCRSAP*TDPAAG
Trigger: CCCGGCTGCAGGATCGGTTCAAGGCGCAGATCGGCA...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATCCTTCTTTTGCAGCTaGAGACTTGGATCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSFFCS*RLGSKG
Trigger: ACCCTTGGATCCAAGTCTTCAGCTGCAAAAGAAGGA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGRRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGATTCCTGGAGCCATATaGGCGCTCAGAGCAAACACT +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQIPGAI*ALRANT
Trigger: AGTGTTTGCTCTGAGCGCTCATATGGCTCCAGGAAT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCAGCAAACATCCGAGTaGAGATCTCACACAACCTTT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVQQTSE*RSHTTF
Trigger: AAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCAGCAAACATCCGAGTaGAGATCTCACACAACCTTT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGQQTSE*RSHTTF
Trigger: AAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTAAAACTCTCTTGCTATaGGGGTCAGCAAACATCCGA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRKTLLL*GSANIR
Trigger: TCGGATGTTTGCTGACCCTCATAGCAAGAGAGTTTT...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTGAAAGGAGTCCCTTGTaGCATCTAGAGCCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: KARAVGLQSGYDKQNSQRERSPL*HLEPFE
Trigger: TTCAAAAGGCTCTAGATGTCACAAGGGACTCCTTTC...ACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTCCTCCAGTCTGGATATaGCAAGCAAAATTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFPPVWI*QAKFPA
Trigger: CGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGG...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGGCCAAGAGACCTGTaGCGTGATTGTATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRPRDL*RDCISK
Trigger: CTTAGAGATACAATCACGTCACAGGTCTCTTGGCCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTGTGCGGATCCGACCTaGGTCCAGGCCTATGTACTC +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLCADPT*VQAYVL
Trigger: GAGTACATAGGCCTGGACTCAGGTCGGATCCGCACA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACCTGTGTTTCAAAGATaGAATCTGGGGAATGGCAAC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAPVFQR*NLGNGN
Trigger: GTTGCCATTCCCCAGATTGCATCTTTGAAACACAGG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTTCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLSFCNT*ARQDSM
Trigger: CATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGA...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTCGGACAGGATGTCCATaGCCAGCAGAACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGRTGCP*PAEPPC
Trigger: ACAAGGTGGTTCTGCTGGGCATGGACATCCTGTCCG...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GACAACAGTGTTCCCAAGGATCTCAGCAGTAAAGATGAAAGACTTCTTCTTTATGCCTTGAACCGATCCTaGAGCCGGGTCACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: DNSVPKDLSSKDERLLLYALNRS*SRVTRA
Trigger: CGCCCTGGTGACCCGGCTGCAGGATCGGTTCAAGGC...ATAAAGAAGAAGTCTTTCATCTTTACTGCTGAGATCCTTGGGAACACTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAGCAGAGTTTGGTCCTaGTCCCTCACAGAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTSRVWS*SLTESL
Trigger: TAAAGACTCTGTGAGGGAGCAGGACCAAACTCTGCT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAAGAACTGATGACAGATaGCCCAACGTGATACAAGCC +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVRTDDR*PNVIQA
Trigger: GGCTTGTATCACGTTGGGGCATCTGTCATCAGTTCT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGACAGCGCCTTCTAACTaGGACAGACTTAGAGGTACA +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLTAPSN*DRLRGT
Trigger: TGTACCTCTAAGTCTGTCGCAGTTAGAAGGCGCTGT...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCTGGCTTCTATTCTTaGTTCGGAATCAGCATCATG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSGFYS*FGISIM
Trigger: CATGATGCTGATTCCGAAGCAAGAATAGAAGCCAGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGTGGTACAAGTGCTCTaGTTCTCTGCTGAAGTGACT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLVVQVL*FSAEVT
Trigger: AGTCACTTCAGCAGAGAAGCAGAGCACTTGTACCAC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAAGGTGTGGTACAAGTaGTCTGCTTCTCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVKVWYK*SASLLK
Trigger: CTTCAGCAGAGAAGCAGAGCACTTGTACCACACCTT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTGGAGGCAAAGCTGCTaGAGAGCTGAAAGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGWRQSC*RAERRR
Trigger: ACGACGCCTTTCAGCTCTGCAGCAGCTTTGCCTCCA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGTGGTTGAGAACTTCTaGTACATCCTCAGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFVVENF*YILSLP
Trigger: CGGCAGACTGAGGATGTAGCAGAAGTTCTCAACCAC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGCTCTTCAGTAAGTTCTaGAGGCCCAGAAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQLFSKF*RPRSPS
Trigger: AGAAGGGCTTCTGGGCCTGCAGAACTTACTGAAGAG...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGAGAATGGTCTTGAAGTaGTCCTCCCAGACACCAAGG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQRMVLK*SSQTPR
Trigger: CCTTGGTGTCTGGGAGGAGCACTTCAAGACCATTCT...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGCTCCCTGTGAGCTGTaGAAGGTGAGGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTAPCEL*KVRFQV
Trigger: GACCTGAAACCTCACCTTGCACAGCTCACAGGGAGC...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAGGAGGAGCTGCTGTTaGTGTTGGTGGTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADRRSCC*CWWSGP
Trigger: GGGCCCAGACCACCAACAGCAACAGCAGCTCCTCCT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCACTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPLQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTCTTTCCCAGCTTCCTaGATCCAATGCAGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQSFPAS*IQCRGS
Trigger: TGACCCTCTGCATTGGATGCAGGAAGCTGGGAAAGA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGTACTTGAAGGAAGCTaGGTGCCCCGAGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADVLEGS*VPRGPA
Trigger: AGCCGGTCCTCGGGGCACGCAGCTTCCTTCAAGTAC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTAACCAAGCCGGCGGGTaGTTCCCATTCCAACGTTTC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTNQAGG*FPFQRF
Trigger: GAAACGTTGGAATGGGAACCACCCGCCGGCTTGGTT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRLQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTGCAGCTGAAGACTTaGATCCAAGGGTGGATGAAC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTLQLKT*IQGWMN
Trigger: GTTCATCCACCCTTGGATCCAAGTCTTCAGCTGCAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAACCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGAGGACTCCAAGGTGTaGTACAAGTGCTCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFEDSKV*YKCSAS
Trigger: AGAAGCAGAGCACTTGTACCACACCTTGGAGTCCTC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTTCACTTCGAGATCGCTaGAGGGACCCAGTCGTTGAC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTSLRDR*RDPVVD
Trigger: GTCAACGACTGGGTCCCTCCAGCGATCTCGAAGTGA...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTACATCCCTGGCTCCTaGGAATCTTGCTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLYIPGS*ESCFAF
Trigger: AAAAGCGAAGCAAGATTCCCAGGAGCCAGGGATGTA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTTCCCGGCTACATCCCTaGCTCCTGGGAATCTTGCTT +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSRLHP*LLGILL
Trigger: AAGCAAGATTCCCAGGAGCCAGGGATGTAGCCGGGA...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTTRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTATTGGTGGCACCATCCTaGAATGTTTTTGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVLVAPS*NVFGKA
Trigger: TGCCTTGCCAAAAACATTCCAGGATGGTGCCACCAA...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCTGGAATTCTTGAGGTaGTTGTGCAGGAGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLLEFLR*LCRSLV
Trigger: CACCAAACTCCTGCACAACCACCTCAAGAATTCCAG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCAAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYASARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVSARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACATGGAACTGGCCAGTGTaGACGCAGCCTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTWNWPV*TQPPQP
Trigger: CGGCTGAGGAGGCTGCGTCCACACTGGCCAGTTCCA...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACACCGGGTGGATGGAACTaGCCAGTGTGGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTPGGWN*PVWTQP
Trigger: AGGCTGCGTCCACACTGGCCAGTTCCATCCACCCGG...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTCTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTTGCTGTTGCTGTTGGTaGTCTGGGCCCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFCCCCW*SGPSLC
Trigger: ACATAAAGAGGGCCCAGACCACCAACAGCAACAGCA...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACCTCCTTGTACTGACTaGGCAGCCGATGAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEPPCTD*AADEGG
Trigger: ACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACAAAGAATTCCTTTGCATaGAAGCTCTGGGGTAGGGAC +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTKNSFA*KLWGRD
Trigger: GTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTT...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGTGTTCCTATGCACTATaGGGCCTTCATTTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLCSYAL*GLHFQP
Trigger: GGGCTGAAAATGAAGGCCCCATAGTGCATAGGAACA...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNALPVR*WRHASL
Trigger: GAGACTCGCATGCCGCCACCACCTCACTGGGAGGGC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp ACGTCAGCACCCTGGCTTTACTGTTCCTATGCACTATGGGGCCTTCATTTTCAGTGTTCTGTTTTTCATTaGAACAGGGGCCCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TSAPWLYCSYALWGLHFQCSVFH*NRGPAG
Trigger: CCCTGCAGGGCCCCTGTTCCAATGAAAAACAGAACA...CTGAAAATGAAGGCCCCATAGTGCATAGGAACAGTAAAGCCAGGGTGCTGACGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGCTTCTTCTTGCTCCTaGAGTCTCCTAACAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRASSCS*SLLTAK
Trigger: CTTTGCTGTTAGGAGACTCCAGGAGCAAGAAGAAGC...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397587.7
ENST00000409078.8
3UTR CAA 72 bp AACGGCTTAGGCAGAACTTTGAGGGGAGGAAACAAGTaGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: NGLGRTLRGGNK*VLNLNHRVAQR
Trigger: TCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCCCTCAAAGTTCTGCCTAAGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAACAGATGCCCCAACGTaGTACAAGCCTCCCGCACTA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADETDAPT*YKPPAL
Trigger: TAGTGCGGGAGGCTTGTATCACGTTGGGGCATCTGT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGCTCTGCTTCTCTGCTaGAGTGACTGTGGAAACCCC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEALLLC*SDCGNP
Trigger: GGGGTTTCCACAGTCACTTCAGCAGAGAAGCAGAGC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAACGTCGTGCCCGAAGATaGGGAGACTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADERRARR*GDFGFG
Trigger: GCCAAATCCAAAGTCTCCTCATCTTCGGGCACGACG...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCTTGCTTCGCTTTTCTaGAGACGGTGTCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTLASLF*RRCHRW
Trigger: CCACCTGTGACACCGTCTTCAGAAAAGCGAAGCAAG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACAGCAAACATCCGAGTaGAGATCTCACACAACCTTT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTQQTSE*RSHTTF
Trigger: AAAGGTTGTGTGAGATCTTCACTCGGATGTTTGCTG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GGGAGGAAACAAGTTGGTGCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGTGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: GRKQVGAQSESPCSPEMRCLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...CCTCATCTCTGGGCTACACGGTGATTCAGATTGAGCACCAACTTGTTTCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTATGCCTTTCTCACGTCTaGACTCTTTGGTTCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVCLSHV*TLWFCC
Trigger: ACAACAGAACCAAAGAGTTCAGACGTGAGAAAGGCA...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGGAACAGTTGGTGGGTaGGGTCAGGGGGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSGTVGG*GQGAGP
Trigger: AGGACCAGCCCCCTGACCTCACCCACCAACTGTTCC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGAGCAGAATGGTCTTaGAGTGCTCCTCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADEGAEWS*SAPPRH
Trigger: GTGTCTGGGAGGAGCACTTCAAGACCATTCTGCTCC...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGCAGCAAGCCTGGGATaGTGTCGACAAGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADAASLG*CRQGAA
Trigger: TGCAGCTCCTTGTCGACATCATCCCAGGCTTGCTGC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGTGAGCTGTGCAAGGTaGGGTTTCAGGTCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLVSCAR*GFRSSP
Trigger: CGGAGAAGACCTGAAACCTCACCTTGCACAGCTCAC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGTGGGGAAAGGTCTCTaGGAGGCACCACCGATTGCT +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVVGKGL*EAPPIA
Trigger: AGCAATCGGTGGTGCCTCTCAGAGACCTTTCCCCAC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CACCCAGCCTCTGCTTTCAGTCCTAGCAGTTGCAGTGGGCTCTGCACTGCAATATCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 4 (lower is better)
Translates to: HPASAFSPSSCSGLCTAISFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...TATTGCAGTGCAGAGCCCACTGCAACTGCTAGGACTGAAAGCAGAGGCTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAATCCTTTTGTTTTGTATaGAGACTGCAATACAGGCCT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKSFCFV*RLQYRP
Trigger: AGGCCTGTATTGCAGTCTTCATACAAAACAAAAGGA...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp ATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAAAGTTCTTGCCAAGACTTaGTTCCCATTTTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: IFVGLLVLTGQPMKGVGKVLAKT*FPFLVG
Trigger: ACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAAC...TTTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR TCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAATTGGCAGAGCCCCCATaGCAACAGTGTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADELAEPP*QQCSQG
Trigger: TCCTTGGGAACACTGTTGTCATGGGGGCTCTGCCAA...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR TCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAATGGGGACCATGCGTGTaGACACAGTGCCAACATAAC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQWGPCV*TQCQHN
Trigger: GTTATGTTGGCACTGTGTTCACACGCATGGTCCCCA...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCGTTACTGTTGCCGCTaGGGACCAGAGAGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNRYCCR*GPESRR
Trigger: GCGGCGGCTCTCTGGTCCGCAGCGGCAACAGTAACG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTCCTTCTGCAACACCTaGGCCAGGCAGGACTCCATG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADSFCNT*ARQDSM
Trigger: CATGGAGTCCTGCCTGGCGCAGGTGTTGCAGAAGGA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGTTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATTTCCCCACATCCTTCTaGAACACCTGCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADFPTSF*NTCARQ
Trigger: CTGCCTGGCGCAGGTGTTGCAGAAGGATGTGGGGAA...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTAACATGGTCTGGTCATaGTCAAGGTCAGCAGACTTC +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFNMVWS*SRSADF
Trigger: GAAGTCTGCTGACCTTGAGCATGACCAGACCATGTT...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGAGAGGCATTGAGTGTTaGTATAAGGCAGAGACAGAT +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQRGIEC*YKAETD
Trigger: ATCTGTCTCTGCCTTATAGCAACACTCAATGCCTCT...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GCTCAATCTGAATCACCGTGTAGCCCAGAGATGAGGGTCTTGGCAGAGCCCCCATATGTGGCACAATCTTaGTTAGTGTTAAAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AQSESPCSPEMRVLAEPPYVAQS*LVLKSV
Trigger: CACAGACTTTAACACTAAGCAAGATTGTGCCACATA...TGGGGGCTCTGCCAAGACCCTCATCTCTGGGCTACACGGTGATTCAGATTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp AAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCGTTAGAGCATTTACTCTCTaGTCCCAATCATGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: KPGQSASSLDMTSKIPSVRAFTL*SQSCLS
Trigger: TGACAAGCATGATTGGGAGCAGAGAGTAAATGCTCT...AACGCTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp GTAGACAGGGAGGCAGAGACAGGCTTAGGTGCTCTGCTCTTTTGTGTTCTGTTTGAGGCAGAGACACTATaGTGTCTGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VDREAETGLGALLFCVLFEAETL*CLSSSG
Trigger: ACCTGAAGAACTCAGACAGCATAGTGTCTCTGCCTC...AAACAGAACACAAAAGAGCAGAGCACCTAAGCCTGTCTCTGCCTCCCTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTAGGGAGAGCTGGAAGGAGACTGTCAGGGTGCACTCCCAATTCTACGCTGAATTTGGCACTGGCTGCTaGGTTCACATCAATATCACT +
Preference number: 4 (lower is better)
Translates to: IRESWKETVRVHSQFYAEFGTGC*VHINIT
Trigger: AGTGATATTGATGTGAACGCAGCAGCCAGTGCCAAA...TTCAGCGTAGAATTGGGAGTGCACCCTGACAGTCTCCTTCCAGCTCTCCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATTGTGATATCCAGTCTCTCTAGGCTTTTCTTGGCTCTTAATCCCACATTAAACGGCTGGTATCGCGGCTaGACCCCTGACTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: IVISSLSRLFLALNPTLNGWYRG*TPDSCW
Trigger: CCAGCATGAGTCAGGGGTGCAGCCGCGATACCAGCC...GTTTAATGTGGGATTAAGAGCCAAGAAAAGCCTAGAGAGACTGGATATCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR GCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTCATCGGAGGAGGAGCTaGTGTTGCTGTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLHRRRS*CCCWWS
Trigger: AGACCACCAACAGCAACAGCAGCTCCTCCTCCGATG...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp AATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGAACTGCAATACAGGCCTTaGTTCCTTTACATTCAATAC +
Preference number: 4 (lower is better)
Translates to: NICGPPCTDWAADEGGGELQYRP*FLYIQY
Trigger: GTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAG...TTCCCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGGTTTTGTATGAAGACTaGAATACAGGCCTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGVLYED*NTGLAS
Trigger: GGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR GCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACAGTGGGCTCTGCACTaGAATAGCAAATACGTTATT +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAQWALH*NSKYVI
Trigger: AATAACGTATTTGCTATTGCAGTGCAGAGCCCACTG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp CTGAAAGCCAGGGCAGTCGGCCTCCAGTCTGGATATGACAAGCAAAATTCCCAGCAAAAGACCTGGTCCTaGTATATTTTGAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: LKARAVGLQSGYDKQNSQQKTWS*YILSQS
Trigger: GCTTTGGCTCAAAATATAGCAGGACCAGGTCTTTTG...CTGGGAATTTTGCTTGTCATATCCAGACTGGAGGCCGACTGCCCTGGCTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR GCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGCTGAATCAGCAATCTTaGTATGAGGGTCAGCAAACA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLNQQS*YEGQQT
Trigger: TGTTTGCTGACCCTCATAGCAAGATTGCTGATTCAG...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000452274.6
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTAATGCAATCTGGGGAATaGCAACAATGCACCATGTGT +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVMQSGE*QQCTMC
Trigger: ACACATGGTGCATTGTTGCCATTCCCCAGATTGCAT...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTTCAAAGATGCAATCTaGGGAATGGCAACAATGCAC +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQFKDAI*GMATMH
Trigger: GTGCATTGTTGCCATTCCCCAGATTGCATCTTTGAA...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTGGGGTACCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: EDVQQCSRSFLSTLGTGVPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...TACCCCAGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTACCTCAAGGTCTCGGCTaGAATAAATCTGTACTACAG +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVPQGLG*NKSVLQ
Trigger: CTGTAGTACAGATTTATTCCAGCCGAGACCTTGAGG...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGCCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: HPTHRVSPSQQAVQDMFQPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...CTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATATCACCTTTCGTGGTGTCAGCTGTGAAAGGGGCCCCACACAGACCATACGCACCCAGTAACATTTTCTaGCTTCTATTCTTGCTTCGG +
Preference number: 4 (lower is better)
Translates to: ISPFVVSAVKGAPHRPYAPSNIF*LLFLLR
Trigger: CCGAAGCAAGAATAGAAGCCAGAAAATGTTACTGGG...TGCGTATGGTCTGTGTGGGGCCCCTTTCACAGCTGACACCACGAAAGGTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAACCAGGTATTCTTCCTaGCTGGCCAAGCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: LIVINICGPPCTDWAADETRYSS*LAKPKP
Trigger: CGGTTTGGGCTTGGCCAGCCAGGAAGAATACCTGGT...TTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATACCAGTGTGAGGTCAGGGGGCTaGTCCTGCTGCTGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VLYEDCNTGLASFTFNTSVRSGG*SCCWCV
Trigger: GACACACCAGCAGCAGGACCAGCCCCCTGACCTCAC...ACTGGTATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATACTGATTGTAATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: ILIVINICGPPCTDWAADGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...ATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTATTACAATCAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGGAGACAGACCCCCATaGGAACAGTTGGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVGDRPP*EQLVGE
Trigger: CTCACCCACCAACTGTTCCCATGGGGGTCTGTCTCC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATCGCCTGAGAGCCTTGTaGGAGGGAGCGGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNRLRAL*EGAVGM
Trigger: CATCCCCACCGCTCCCTCCCACAAGGCTCTCAGGCG...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263710.8
CDS-3UTR CCA 90 bp TCAGACTGTTCTTGCCAAGACTTGATTCCCATTTTTAGTAGGTCTCAGAACACAAAGGCGCGCGGAGGCTaGGTGTTGAGTAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SDCSCQDLIPIFSRSQNTKARGG*VLSSEV
Trigger: GACCTCACTACTCAACACCCAGCCTCCGCGCGCCTT...TGTGTTCTGAGACCTACTAAAAATGGGAATCAAGTCTTGGCAAGAACAGTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCAGATTTAAACTTGAAGAATTCCTTTGCATGGAAGCTCTGGGGTAGGGACCTTGGTCAGAATGGTCGATaGGCACGTCTCGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PDLNLKNSFAWKLWGRDLGQNGR*ARLEAA
Trigger: AGCAGCTTCGAGACGTGCCCATCGACCATTCTGACC...AAGGTCCCTACCCCAGAGCTTCCATGCAAAGGAATTCTTCAAGTTTAAATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGCCACCAGGTCAGAATaGTCGATGGGCACGTCTCGA +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVATRSE*SMGTSR
Trigger: TCGAGACGTGCCCATCGACCATTCTGACCTGGTGGC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp CCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATGTTTCAGTAAGTGCTCGAATTGAATaGTCTTTGTCTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PHTQGFAISAGCTRHVSVSARIE*SLSPRV
Trigger: GACCCTTGGAGACAAAGACCATTCAATTCGAGCACT...TACTGAAACATGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAATATTTGTGGGCCTCCTTGTACTGACTGGGCAGCCGATGAAGGGGGTGGGTTATGGGAGTCTTTGTaGGCTTCCAGAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: INICGPPCTDWAADEGGGLWESL*ASRVFI
Trigger: TATGAAGACTCTGGAAGCCCACAAAGACTCCCATAA...CCCACCCCCTTCATCGGCTGCCCAGTCAGTACAAGGAGGCCCACAAATATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp TACTATGAGGACGTCCAGCAATGTTCGAGATCCTTTCTAAGTACACTGGGGACTCTCACCACCTCCTTATaGGAGTCTTTGTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: YYEDVQQCSRSFLSTLGTLTTSL*ESLWAS
Trigger: GGAAGCCCACAAAGACTCCCATAAGGAGGTGGTGAG...AGTCCCCAGTGTACTTAGAAAGGATCTCGAACATTGCTGGACGTCCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTCTCTGAGAGGCACCACCGATTGCTTCTAGGTCTACACAAGAGACAGGTACTGCTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: VSERHHRLLLGLHKRQVLLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...CAGTACCTGTCTCTTGTGTAGACCTAGAAGCAATCGGTGGTGCCTCTCAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000452274.6
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACACTAAGCAAAACACGCTaGCCTTACGCACACTACTTT +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTLSKTR*PYAHYF
Trigger: AAAGTAGTGTGCGTAAGGCCAGCGTGTTTTGCTTAG...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp AAAAACTGCACCCCACACACAGGGTTTCGCCATCTCAGCAGGCTGTACAAGACATTGCTGTTGGTGGTCTaGGCCCTCTTTATGTATAAG +
Preference number: 4 (lower is better)
Translates to: KNCTPHTGFRHLSRLYKTLLLVV*ALFMYK
Trigger: CTTATACATAAAGAGGGCCCAGACCACCAACAGCAA...TGTCTTGTACAGCCTGCTGAGATGGCGAAACCCTGTGTGTGGGGTGCAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp ATAAAGAAACTCATGGATAACCTAGCCCGACGCACATTCCTGCAACAAAGGGGTAGCTGCTGTTGCTGTTaGTGGTCTGGGCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: IKKLMDNLARRTFLQQRGSCCCC*WSGPSL
Trigger: TAAAGAGGGCCCAGACCACCAACAGCAACAGCAGCT...ACCCCTTTGTTGCAGGAATGTGCGTCGGGCTAGGTTATCCATGAGTTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GTAGGTCTCAGAACACAACTTAAAGATATATCACCTTTCGTGGTGTCAGCTGTGGCCATTAGCTGTGCGTaGAGACATCGGAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VGLRTQLKDISPFVVSAVAISCA*RHRRRS
Trigger: GCTCCTCCTCCGATGTCTCCACGCACAGCTAATGGC...CACAGCTGACACCACGAAAGGTGATATATCTTTAAGTTGTGTTCTGAGACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000455322.6
ENST00000541377.5
CDS-3UTR CCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAAGACTGGGGTACCTTCTaGGAGTCAAAGAGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQDWGTF*ESKSSR
Trigger: CCTTGAGCTCTTTGACTCCCAGAAGGTACCCCAGTC...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp GACGTGATTGTATCTCTAAGTCAGGAGACTGAAGACTGGGCGAGTGACATTCAACAGGAGACTGAAGACTaGGCGAGTGACATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: DVIVSLSQETEDWASDIQQETED*ASDIQG
Trigger: GCCTTGAATGTCACTCGCCCAGTCTTCAGTCTCCTG...TTGAATGTCACTCGCCCAGTCTTCAGTCTCCTGACTTAGAGATACAATCACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7
ENST00000409078.8
ENST00000541377.5
CDS-3UTR CCA 90 bp CCTTTTGTTTTGTATGAAGACTGCAATACAGGCCTTGCTTCCTTTACATTCAATGCCCTCCCAGTGAGGTaGTGGCGGCATGCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PFVLYEDCNTGLASFTFNALPVR*WRHASL
Trigger: GAGACTCGCATGCCGCCACCACCTCACTGGGAGGGC...ATTGAATGTAAAGGAAGCAAGGCCTGTATTGCAGTCTTCATACAAAACAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263710.8
ENST00000397587.7