Pregenerated sensors for CKB (Homo sapiens)
Ensembl gene IDs: ENSG00000166165Ensembl transcript IDs: ENST00000553528.5, ENST00000553652.5, ENST00000554705.5, ENST00000554989.1, ENST00000555366.1, ENST00000555659.5, ENST00000557530.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGCGGCTGCAGGATGCTGCGGCCCGTaGGCACCCGCGAGCTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: GQGFHRELLDGAALPAAAGCCGP*APASSA Trigger: TGCTGAGCTCGCGGGTGCGCACGGGCCGCAGCATCC...TGCAGCCGCGGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGCGGCTGCAAGGTCGTCGCCGCCCTaGAGGTTGTCGGGGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GQGFHRELLDGAALPAAARSSPP*RLSGLR Trigger: CCTCAACCCCGACAACCTGCAGGGCGGCGACGACCT...TGCAGCCGCGGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR CCA 90 bp | GTCCAGGCTGGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCAGGAAGCAGCAGGGCTaGTGTCGGGTGTGGGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: VQAGQGFHRELLDGAALPRKQQG*CRVWAG Trigger: CCCGGCCCACACCCGACACCAGCCCTGCTGCTTCCT...GGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCCAGCCTGGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR GCA 90 bp | GGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGCGGCTGCAGGCGAACATCAGGGGTaGATGGTGGGCACTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GQGFHRELLDGAALPAAAGEHQG*MVGTAQ Trigger: CTGGGCAGTGCCCACCATGCACCCCTGATGTTCGCC...TGCAGCCGCGGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGAGGAAGCAGCAGGGCTaGTGTCGGGTGTGGGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSRKQQG*CRVWAG Trigger: CCCGGCCCACACCCGACACCAGCCCTGCTGCTTCCT...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCAGGTCGTCGATGGCCTaGCCCTGCTCCAGCCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GLVSGVGRASFLGRHEVVRSSMA*PCSSRC Trigger: GCAGCGGCTGGAGCAGGGCCAGGCCATCGACGACCT...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGGGCAGAAGCCACGGATaGTGCGGCCCGTGCGCACCC | + |
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Preference number: 2 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMGRSHG*CGPCAP Trigger: GGGTGCGCACGGGCCGCAGCATCCGTGGCTTCTGCC...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCCCAGGCGGTCAGCGTTaGAGACGTCGAAGACCCCGC | + |
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Preference number: 2 (lower is better) Translates to: GLVSGVGRASFLGRHEVVPGGQR*RRRRPR Trigger: GCGGGGTCTTCGACGTCTCCAACGCTGACCGCCTGG...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGCTTGATATGCACACCTaGCCGCAGCCCGGTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSLDMHT*PQPGAQ Trigger: CTGGGCACCGGGCTGCGGGCAGGTGTGCATATCAAG...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCCCAGGTTGGGCAGCTTaGTATGCACACCTGCCCGCA | + |
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Preference number: 2 (lower is better) Translates to: GLVSGVGRASFLGRHEVVPGWAA*YAHLPA Trigger: TGCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGG...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGCCTGTGCCTCGCTTCTaGAGTCGCAGCCGCTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSPVPRF*SRSRLS Trigger: GCTTAAGCGGCTGCGACTTCAGAAGCGAGGCACAGG...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCCCTGTGCCTCGCTTCTaGAGTCGCAGCCGCTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: GLVSGVGRASFLGRHEVVPVPRF*SRSRLS Trigger: GCTTAAGCGGCTGCGACTTCAGAAGCGAGGCACAGG...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGGGCGAACATCAGGGGTaGATGGTGGGCACTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMGEHQG*MVGTAQ Trigger: CTGGGCAGTGCCCACCATGCACCCCTGATGTTCGCC...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGCCCTGCTCCAGCCGCTaGTCCATCTCGATGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMPCSSR*SISMSS Trigger: GCTGCTCATCGAGATGGAGCAGCGGCTGGAGCAGGG...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGTTGGGCAGCTTGATATaGACACCTGCCCGCAGCCCG | + |
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Preference number: 2 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMLGSLI*TPARSP Trigger: CGGGCTGCGGGCAGGTGTGCATATCAAGCTGCCCAA...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGTGTCCACACCGCCTGTaGCTCGCTTCTGAAGTCGCA | + |
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Preference number: 2 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMCPHRL*LASEVA Trigger: TGCGACTTCAGAAGCGAGGCACAGGCGGTGTGGACA...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR TCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCAAACTCTACCAAGGGTaGCGGAAGTCTCTACAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GLVSGVGRASFLGRHEVVKLYQG*RKSLQQ Trigger: TTGCTGTAGAGACTTCCGTCACCCTTGGTAGAGTTT...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCCTTGATATGCACACCTaGCCGCAGCCCGGTGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LEESFNLGEAGAEAGEHLLDMHT*PQPGAQ Trigger: CTGGGCACCGGGCTGCGGGCAGGTGTGCATATCAAG...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR GCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCTGGTCGTCGATGAGCTaGTGCTGCTCCGCCTCCGTC | + |
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Preference number: 2 (lower is better) Translates to: LEESFNLGEAGAEAGEHLWSSMS*CCSASV Trigger: GACGGAGGCGGAGCAGCAGCAGCTCATCGACGACCA...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCGGCTGGTGTCGGGTGTaGGCCGGGCTTCATTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LEESFNLGEAGAEAGEHLGWCRV*AGLHFW Trigger: CCAGAAATGAAGCCCGGCCCACACCCGACACCAGCC...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR CCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCGCCGGGCTTCATTTCTaGGCAGGCATGAGGTCGTCG | + |
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Preference number: 2 (lower is better) Translates to: LEESFNLGEAGAEAGEHLAGLHF*AGMRSS Trigger: CGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGC...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR CAA 90 bp | GTCCAGGCTGGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCCCCAGGTTGGGCAGCTaGATATGCACACCTGCCCGC | + |
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Preference number: 3 (lower is better) Translates to: VQAGQGFHRELLDGAALPPRLGS*ICTPAR Trigger: GCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGGG...GGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCCAGCCTGGAC 69% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR CCA 72 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTaGGCAGGCATGAGGTCGTCGATGGCCTGGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: QGWCRVWAGLHF*AGMRSSMAWPC Trigger: GCAGGGCCAGGCCATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR CAA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGCCCAGGTTGGGCAGCTaGATATGCACACCTGCCCGC | + |
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Preference number: 3 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMPRLGS*ICTPAR Trigger: GCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGGG...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR CAA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGGAGAACTTCTCATGCTaGCCCAGGTTGGGCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSENFSC*PRLGSL Trigger: CAAGCTGCCCAACCTGGGCAAGCATGAGAAGTTCTC...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| 3UTR-3UTR CAA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCCCCAGGCGGTCAGCGTaGGAGACGTCGAAGACCCCG | + |
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Preference number: 3 (lower is better) Translates to: LEESFNLGEAGAEAGEHLPRRSA*ETSKTP Trigger: CGGGGTCTTCGACGTCTCCAACGCTGACCGCCTGGG...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| 3UTR-3UTR CAA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGGAGAACTTCTCATGCTaGCCCAGGTTGGGCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMENFSC*PRLGSL Trigger: CAAGCTGCCCAACCTGGGCAAGCATGAGAAGTTCTC...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CCA 90 bp | GGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGCGGCTGCAAGGAAGCAGCAGGGCTaGTGTCGGGTGTGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GQGFHRELLDGAALPAAARKQQG*CRVWAG Trigger: CCCGGCCCACACCCGACACCAGCCCTGCTGCTTCCT...TGCAGCCGCGGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR GCA 90 bp | GGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGCGGCTGCACCCTGCTCCAGCCGCTaGTCCATCTCGATGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GQGFHRELLDGAALPAAAPCSSR*SISMSS Trigger: GCTGCTCATCGAGATGGAGCAGCGGCTGGAGCAGGG...TGCAGCCGCGGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGGCTGGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCCCAGGCGGTCAGCGTTaGAGACGTCGAAGACCCCGC | + |
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Preference number: 4 (lower is better) Translates to: VQAGQGFHRELLDGAALPPGGQR*RRRRPR Trigger: GCGGGGTCTTCGACGTCTCCAACGCTGACCGCCTGG...GGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCCAGCCTGGAC 70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR TCA 90 bp | GGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGCGGCTGCACCTGTGCCTCGCTTCTaGAGTCGCAGCCGCTTAAGC | + |
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Preference number: 4 (lower is better) Translates to: GQGFHRELLDGAALPAAAPVPRF*SRSRLS Trigger: GCTTAAGCGGCTGCGACTTCAGAAGCGAGGCACAGG...TGCAGCCGCGGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGGGATGCTGCGGCCCGTaGGCACCCGCGAGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSGCCGP*APASSA Trigger: TGCTGAGCTCGCGGGTGCGCACGGGCCGCAGCATCC...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGGGCAGAAGCCACGGATaGTGCGGCCCGTGCGCACCC | + |
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Preference number: 4 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSGRSHG*CGPCAP Trigger: GGGTGCGCACGGGCCGCAGCATCCGTGGCTTCTGCC...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR GCA 90 bp | GTCCAGGCTGGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCTGGTCGTCGATGAGCTaGTGCTGCTCCGCCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: VQAGQGFHRELLDGAALPWSSMS*CCSASV Trigger: GACGGAGGCGGAGCAGCAGCAGCTCATCGACGACCA...GGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCCAGCCTGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR GCA 90 bp | GTCCAGGCTGGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCCTTGATATGCACACCTaGCCGCAGCCCGGTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: VQAGQGFHRELLDGAALPLDMHT*PQPGAQ Trigger: CTGGGCACCGGGCTGCGGGCAGGTGTGCATATCAAG...GGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCCAGCCTGGAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | GTCCAGGCTGGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGGCTGGTGTCGGGTGTaGGCCGGGCTTCATTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VQAGQGFHRELLDGAALPGWCRV*AGLHFW Trigger: CCAGAAATGAAGCCCGGCCCACACCCGACACCAGCC...GGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCCAGCCTGGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR TCA 90 bp | GTCCAGGCTGGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGAGTTTCAATCTGGGTaGGGCCGGTGCAGAAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: VQAGQGFHRELLDGAALPEFQSG*GRCRSG Trigger: CCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTC...GGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCCAGCCTGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGTGTTGGAGAAGGGCATaGCGGCGGCGGGCGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMCWRRA*RRRAGG Trigger: GCCGCCCGCCCGCCGCCGCCATGCCCTTCTCCAACA...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCAGGAAGCAGCAGGGCTaGTGTCGGGTGTGGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GLVSGVGRASFLGRHEVVRKQQG*CRVWAG Trigger: CCCGGCCCACACCCGACACCAGCCCTGCTGCTTCCT...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR TCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGCCTCCGTCATGCTCTTaGGCGCGTAGTATCGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSPPSCS*ARSIGP Trigger: CGGGCCGATACTACGCGCTCAAGAGCATGACGGAGG...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR GCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCCCCTGCTCCAGCCGCTaGTCCATCTCGATGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLVSGVGRASFLGRHEVVPCSSR*SISMSS Trigger: GCTGCTCATCGAGATGGAGCAGCGGCTGGAGCAGGG...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR GCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGGCGAACATCAGGGGTaGATGGTGGGCACTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GLVSGVGRASFLGRHEVVGEHQG*MVGTAQ Trigger: CTGGGCAGTGCCCACCATGCACCCCTGATGTTCGCC...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGGGCGAACATCAGGGGTaGATGGTGGGCACTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSGEHQG*MVGTAQ Trigger: CTGGGCAGTGCCCACCATGCACCCCTGATGTTCGCC...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGTGCGTTGTGGCTGTTaGAGAAGGGCATGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GLVSGVGRASFLGRHEVVVRCGC*RRAWRR Trigger: CCGCCGCCATGCCCTTCTCCAACAGCCACAACGCAC...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGGGTCGCCGTCCAGGCTaGACAGGGCTTCCACCGCGA | + |
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Preference number: 4 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMGRRPG*TGLPPR Trigger: TCGCGGTGGAAGCCCTGTCCAGCCTGGACGGCGACC...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGAGGTCGTCGATGGCCTaGCCCTGCTCCAGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMRSSMA*PCSSRC Trigger: GCAGCGGCTGGAGCAGGGCCAGGCCATCGACGACCT...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR TCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGCGCAGCCCACGGTCATaGTGTACGGGTGGCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMRSPRS*CTGGSS Trigger: GGACGAGCCACCCGTACATCATGACCGTGGGCTGCG...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR GCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCTTGGGCAGCTTGATATaGACACCTGCCCGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GLVSGVGRASFLGRHEVVLGSLI*TPARSP Trigger: CGGGCTGCGGGCAGGTGTGCATATCAAGCTGCCCAA...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTTGGGCAGCTTGATATaGACACCTGCCCGCAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSLGSLI*TPARSP Trigger: CGGGCTGCGGGCAGGTGTGCATATCAAGCTGCCCAA...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGCCAGGCGGTCAGCGTTaGAGACGTCGAAGACCCCGC | + |
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Preference number: 4 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMPGGQR*RRRRPR Trigger: GCGGGGTCTTCGACGTCTCCAACGCTGACCGCCTGG...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CCA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGCCGGGCTTCATTTCTaGGCAGGCATGAGGTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: GLVSGVGRASFLGRHEVVAGLHF*AGMRSS Trigger: CGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGC...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGGCCGGGCTTCATTTCTaGGCAGGCATGAGGTCGTCG | + |
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Preference number: 4 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSAGLHF*AGMRSS Trigger: CGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGC...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR GCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTGTCCACACCGCCTGTaGCTCGCTTCTGAAGTCGCA | + |
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Preference number: 4 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSCPHRL*LASEVA Trigger: TGCGACTTCAGAAGCGAGGCACAGGCGGTGTGGACA...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGGGCTGGTGTCGGGTGTaGGCCGGGCTTCATTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMGWCRV*AGLHFW Trigger: CCAGAAATGAAGCCCGGCCCACACCCGACACCAGCC...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR TCA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGCCAGGTTGGGCAGCTTaGTATGCACACCTGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMPGWAA*YAHLPA Trigger: TGCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGG...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGAGCTTCAGTGCGTTGTaGCTGTTGGAGAAGGGCATG | + |
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Preference number: 4 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSSFSAL*LLEKGM Trigger: CATGCCCTTCTCCAACAGCCACAACGCACTGAAGCT...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCAGGTCGTCGATGGCCTaGCCCTGCTCCAGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LEESFNLGEAGAEAGEHLRSSMA*PCSSRC Trigger: GCAGCGGCTGGAGCAGGGCCAGGCCATCGACGACCT...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR GCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCAGGTCGTCGCCGCCCTaGAGGTTGTCGGGGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LEESFNLGEAGAEAGEHLRSSPP*RLSGLR Trigger: CCTCAACCCCGACAACCTGCAGGGCGGCGACGACCT...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR TCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCCCAGGTTGGGCAGCTTaGTATGCACACCTGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LEESFNLGEAGAEAGEHLPGWAA*YAHLPA Trigger: TGCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGG...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCGTCATGATGTACGGGTaGCTCGTCCTCGGCCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: LEESFNLGEAGAEAGEHLVMMYG*LVLGRE Trigger: TTCCCGGCCGAGGACGAGCCACCCGTACATCATGAC...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CCA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCAAGAGAGTTTCAATCTaGGTGAGGCCGGTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LEESFNLGEAGAEAGEHLKRVSI*VRPVQK Trigger: CTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTT...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS GCA 90 bp | TCGGCCCGCCAGGTCGCCGTCCAGGCTGGACAGGGCTGCGAGGGGTaGGCTCAGGACGCTCGGCTCCCGCGCCCGCCCCTCCAGCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: SARQVAVQAGQGCEG*AQDARLPRPPLQPA Trigger: TGCGGGCTGGAGGGGCGGGCGCGGGAGCCGAGCGTCCTGAGCGCACCCCTCGCAGCCCTGTCCAGCCTGGACGGCGACCTGGCGGGCCGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553528.5 |
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| CDS-3UTR CAA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCCCCAGGCGGTCAGCGTaGGAGACGTCGAAGACCCCG | + |
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Preference number: 5 (lower is better) Translates to: GLVSGVGRASFLGRHEVVPRRSA*ETSKTP Trigger: CGGGGTCTTCGACGTCTCCAACGCTGACCGCCTGGG...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CAA 90 bp | GGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGCGGCTGCAGAGAACTTCTCATGCTaGCCCAGGTTGGGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GQGFHRELLDGAALPAAAENFSC*PRLGSL Trigger: CAAGCTGCCCAACCTGGGCAAGCATGAGAAGTTCTC...TGCAGCCGCGGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS GCA 90 bp | CCCCAGGCCGCCCCCAGACCAAAGGAACTTCCCAAGTCCCTGAGGTaGTGCTCCCTGCCATGCCCAGGAGTGGAGGCTGCTGCCAAGACT | + |
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Preference number: 5 (lower is better) Translates to: PQAAPRPKELPKSLR*CSLPCPGVEAAAKT Trigger: AGTCTTGGCAGCAGCCTCCACTCCTGGGCATGGCAGGGAGCAGCACCTCAGGGACTTGGGAAGTTCCTTTGGTCTGGGGGCGGCCTGGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000555366.1 |
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| CDS-3UTR CAA 90 bp | GGACAGGGCTTCCACCGCGAGCTTCTCGATGGCGCGGCGCTCCCCGCGGCTGCAAAGGTCTTATTGTCATaGTGCCAGATACCGCGGGCG | + |
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Preference number: 5 (lower is better) Translates to: GQGFHRELLDGAALPAAAKVLLS*CQIPRA Trigger: CGCCCGCGGTATCTGGCACAATGACAATAAGACCTT...TGCAGCCGCGGGGAGCGCCGCGCCATCGAGAAGCTCGCGGTGGAAGCCCTGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CAA 90 bp | CAGGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGCCCAGGTTGGGCAGCTaGATATGCACACCTGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: QGWCRVWAGLHFWAGMRSPRLGS*ICTPAR Trigger: GCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGGG...CGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CAA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCCCCAGGTTGGGCAGCTaGATATGCACACCTGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: GLVSGVGRASFLGRHEVVPRLGS*ICTPAR Trigger: GCGGGCAGGTGTGCATATCAAGCTGCCCAACCTGGG...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS GCA 90 bp | CAGGCCGCCCCCAGACCAAAGGAACTTCCCAAGTCCCTGAGGTGCTaGTCCCTGCCATGCCCAGGAGTGGAGGCTGCTGCCAAGACTCCA | + |
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Preference number: 5 (lower is better) Translates to: QAAPRPKELPKSLRC*SLPCPGVEAAAKTP Trigger: TGGAGTCTTGGCAGCAGCCTCCACTCCTGGGCATGGCAGGGAGCAGCACCTCAGGGACTTGGGAAGTTCCTTTGGTCTGGGGGCGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555366.1 |
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| CDS-3UTR CAA 90 bp | TGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGATGCGCAGCTTCAGTGCGTaGTGGCTGTTGGAGAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: WCRVWAGLHFWAGMRSSMRSFSA*WLLEKG Trigger: GCCCTTCTCCAACAGCCACAACGCACTGAAGCTGCG...CATCGACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS-3UTR CAA 90 bp | GGGCTGGTGTCGGGTGTGGGCCGGGCTTCATTTCTGGGCAGGCATGAGGTCGTCGAGAACTTCTCATGCTaGCCCAGGTTGGGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: GLVSGVGRASFLGRHEVVENFSC*PRLGSL Trigger: CAAGCTGCCCAACCTGGGCAAGCATGAGAAGTTCTC...GACGACCTCATGCCTGCCCAGAAATGAAGCCCGGCCCACACCCGACACCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553652.5 ENST00000554989.1 |
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| CDS-3UTR CAA 90 bp | CTTGAAGAGAGTTTCAATCTGGGTGAGGCCGGTGCAGAAGCGGGTGAACACCTCAGTGCGTTGTGGCTGTaGGAGAAGGGCATGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: LEESFNLGEAGAEAGEHLSALWL*EKGMAA Trigger: CGCCGCCATGCCCTTCTCCAACAGCCACAACGCACT...GAGGTGTTCACCCGCTTCTGCACCGGCCTCACCCAGATTGAAACTCTCTTCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553652.5 |
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| CDS TCA 72 bp | TCCAGTCCTCACGGCCCGGGCGACGGTCCCAGGCGGTaGCCCCGCGCCAGGACCCGCCCTCCCTGGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSPHGPGDGPRR*PRARTRPPWAP Trigger: TGGGGCCCAGGGAGGGCGGGTCCTGGCGCGGGGTCACCGCCTGGGACCGTCGCCCGGGCCGTGAGGACTGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000553528.5 |
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| CDS CCA 72 bp | TCGTCCTCGGCCGGGAAGCGCAGCTTCAGTGCGTTGTaGCGGGCGGCCGGGCGGGGGCGGGGGCGCTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: SSSAGKRSFSAL*RAAGRGRGRSV Trigger: GACGGAGCGCCCCCGCCCCCGCCCGGCCGCCCGCCACAACGCACTGAAGCTGCGCTTCCCGGCCGAGGACGA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000557530.1 |
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| CDS GCA 72 bp | TCGGCCCGCCAGGTCGCCGTCCAGGCTGGACAGGGCTaGGAGGGGTGCGCTCAGGACGCTCGGCTCCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: SARQVAVQAGQG*EGCAQDARLPR Trigger: GCGCGGGAGCCGAGCGTCCTGAGCGCACCCCTCGCAGCCCTGTCCAGCCTGGACGGCGACCTGGCGGGCCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553528.5 |
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| CDS CAA 72 bp | AACTCGTCCTCGGCCGGGAAGCGCAGCTTCAGTGCGTaGTGGCGGGCGGCCGGGCGGGGGCGGGGGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NSSSAGKRSFSA*WRAAGRGRGRS Trigger: GGAGCGCCCCCGCCCCCGCCCGGCCGCCCGCCACAACGCACTGAAGCTGCGCTTCCCGGCCGAGGACGAGTT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000557530.1 |
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| CDS TCA 72 bp | GGGCTGGGCCTCCGTCCCTCGGTCCCTCCGGGAAACTaGACCCGGGCGCGCGCAGATAAGAGCGCGACGGCG | + |
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Preference number: 6 (lower is better) Translates to: GLGLRPSVPPGN*TRARADKSATA Trigger: CGCCGTCGCGCTCTTATCTGCGCGCGCCCGGGTTCAGTTTCCCGGAGGGACCGAGGGACGGAGGCCCAGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000553528.5 ENST00000554705.5 ENST00000555659.5 |
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| CDS GCA 72 bp | GCCCCCAGACCAAAGGAACTTCCCAAGTCCCTGAGGTaGTGCTCCCTGCCATGCCCAGGAGTGGAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: APRPKELPKSLR*CSLPCPGVEAA Trigger: AGCAGCCTCCACTCCTGGGCATGGCAGGGAGCAGCACCTCAGGGACTTGGGAAGTTCCTTTGGTCTGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000555366.1 |
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