RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CHRDL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000054938

Ensembl transcript IDs: ENST00000263671.9, ENST00000376324.7, ENST00000376332.8, ENST00000525413.5, ENST00000528471.1, ENST00000528789.1, ENST00000529912.5, ENST00000534159.5, ENST00000534276.5, ENST00000622063.4

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGCATAGGATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTaGCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAG +
Preference number: 1 (lower is better)
Translates to: VHRMQGKGPKARKAG*HTSPWEYVFPPCTQ
Trigger: CTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTATGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR GCA 90 bp TCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAGGATaGAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCT +
Preference number: 1 (lower is better)
Translates to: SHAGSPGGHPHRCIG*RARGRRHGRPGATP
Trigger: AGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 90 bp GTGGCGAGGGATGAAGCTCAGAGGGGCGCTGAGGCCAGTGGGGGCTaGGGTGCCCGGGCCTCTCTTTCTCCCAGCATCACTGGAACATGG +
Preference number: 1 (lower is better)
Translates to: VARDEAQRGAEASGG*GARASLSPSITGTW
Trigger: CCATGTTCCAGTGATGCTGGGAGAAAGAGAGGCCCGGGCACCCCAGCCCCCACTGGCCTCAGCGCCCCTCTGAGCTTCATCCCTCGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 90 bp CGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTaGGGATACCGATGTGTGGACGAGGACCCGGCCCGGTGCCTTGGG +
Preference number: 1 (lower is better)
Translates to: RGLVFQGKATQVVWA*GYRCVDEDPARCLG
Trigger: CCCAAGGCACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 90 bp AGCACTTCCCAGCCACTTTCTCGGGGTGACGGCAGGGGTACTCGGTaGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGG +
Preference number: 1 (lower is better)
Translates to: STSQPLSRGDGRGTR*DRSHAGSPGGHPHR
Trigger: CCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCGAGAAAGTGGCTGGGAAGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 90 bp CAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTaGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCGGTGC +
Preference number: 1 (lower is better)
Translates to: QVRGLVFQGKATQVV*AWGYRCVDEDPARC
Trigger: GCACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR GCA 90 bp GTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCGGTaGCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTC +
Preference number: 1 (lower is better)
Translates to: VWAWGYRCVDEDPAR*LGTPGRTDLTVARV
Trigger: GACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 90 bp GGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTaGGAGTACGTCTTCCCGCCATGCACACAGGCTTTCTTATGTTTC +
Preference number: 1 (lower is better)
Translates to: GKGPKARKAGCHTSP*EYVFPPCTQAFLCF
Trigger: GAAACATAAGAAAGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 90 bp AGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTaGACGAGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTG +
Preference number: 1 (lower is better)
Translates to: RAKRRRLSGLGDTDV*TRTRPGALGHLVEL
Trigger: CAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR TCA 90 bp TCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCGGGGTaGCGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCC +
Preference number: 1 (lower is better)
Translates to: SSGQILQHFPATFSG*RQGYSVGQVTRWQS
Trigger: GGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCGAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 90 bp ACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTaGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTC +
Preference number: 1 (lower is better)
Translates to: TRPGALGHLVELISL*PGSALSSGQILQHF
Trigger: GAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR GCA 90 bp GTTCCAGTGACCTTCGTGGGGGCCAGCGAGCAGTCGGAAGTGCTGTaGCTCTTTCTGGAAGTCTTGCTTCCTGACTTTCTTGATCTGAGT +
Preference number: 1 (lower is better)
Translates to: VPVTFVGASEQSEVL*LFLEVLLPDFLDLS
Trigger: ACTCAGATCAAGAAAGTCAGGAAGCAAGACTTCCAGAAAGAGGCACAGCACTTCCGACTGCTCGCTGGCCCCCACGAAGGTCACTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376324.7
3UTR CAA 90 bp CCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTaGGGGATACCGATGTGTGGACGAGGACCCGGCCCGGTGCCTTGG +
Preference number: 2 (lower is better)
Translates to: PRPRVPGQSDAGCLG*GIPMCGRGPGPVPW
Trigger: CCAAGGCACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp ACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCTGCCACACCTCCCCGTaGGAGTACGTCTTCCCGCCA +
Preference number: 2 (lower is better)
Translates to: TRWDRSHAGSPGGHPHRCCHTSP*EYVFPP
Trigger: TGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCA...GCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp AGCCACTTTCTCGGGGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGGCAGGGGTACTCGGTaGGACAGGTCACACGCTGGC +
Preference number: 2 (lower is better)
Translates to: SHFLGVTAGVLGGTGHTLGRGTR*DRSHAG
Trigger: GCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCC...CAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCGAGAAAGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CAA 90 bp TCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTaGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCC +
Preference number: 2 (lower is better)
Translates to: STKSEASCSRAKRRR*SGLGDTDVWTRTRP
Trigger: GGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR TCA 90 bp CAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACGTCCTTCAGGACGATCTTaGCAGTTGTGCTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: QGAEGTEGRVPHLPVGVRPSGRS*QLCCLL
Trigger: GAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGG...ACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CAA 90 bp GGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCGGTGCCTaGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCTGCT +
Preference number: 2 (lower is better)
Translates to: GLGDTDVWTRTRPGA*GHLVELISLWPGSA
Trigger: AGCAGACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp GATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCGGACAGGTCACACGCTaGCAGTCCTGGCGGCCATCC +
Preference number: 2 (lower is better)
Translates to: DLHQVRGLVFQGKATQVVGQVTR*QSWRPS
Trigger: GGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCC...GACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp TCTCGGGGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGATGTCTCACCCCATaGAGCGACTGCACACTGTCC +
Preference number: 2 (lower is better)
Translates to: SRGDGRGTRWDRSHAGSPGCLTP*SDCTLS
Trigger: GGACAGTGTGCAGTCGCTCCATGGGGTGAGACATCC...AGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000528471.1
3UTR-3UTR GCA 90 bp CGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCACCCCATGGAGCGACTaGACACTGTCCTCTTCATCC +
Preference number: 2 (lower is better)
Translates to: RRRLSGLGDTDVWTRTRPTPWSD*TLSSSS
Trigger: GGATGAAGAGGACAGTGTGCAGTCGCTCCATGGGGT...GGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528471.1
3UTR-3UTR TCA 90 bp CGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATACCTTCAGGACGATCTTaGCAGTTGTGCTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: RWDRSHAGSPGGHPHRCIPSGRS*QLCCLL
Trigger: GAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGG...TATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp GTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCTTCTCCCAGCATCACTaGAACATGGATCCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: VTAGVLGGTGHTLAVLAAFSQHH*NMDPED
Trigger: ATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAA...GGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp AGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCCTTGGGTCTGAAGTaGCGAGGGATGAAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: SDAGCLGLGIPMCGRGPGPLGLK*RGMKLR
Trigger: TCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGG...GCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp CTGATCTCACTGTGGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACGGCAGGGGTACTCGGTaGGACAGGTCACACGCTGGC +
Preference number: 2 (lower is better)
Translates to: LISLWPGSALSSGQILQHGRGTR*DRSHAG
Trigger: GCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCC...GTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR TCA 90 bp GATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCCCTTCAGGACGATCTTaGCAGTTGTGCTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: DLHQVRGLVFQGKATQVVPSGRS*QLCCLL
Trigger: GAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGG...GACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp GGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACATTCTCCCAGCATCACTaGAACATGGATCCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: GVLGGTGHTLAVLAAILTFSQHH*NMDPED
Trigger: ATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAA...TGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp TCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGCCCTTGGGTCTGAAGTaGCGAGGGATGAAGCTCAGA +
Preference number: 2 (lower is better)
Translates to: SPPSPRPRVPGQSDAGCLPLGLK*RGMKLR
Trigger: TCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGG...CAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp TCTCACTGTGGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCACACGCTGGCAGTCCTaGCGGCCATCCTCACAGGTG +
Preference number: 2 (lower is better)
Translates to: SHCGQGLLCPLGKSCSTSTRWQS*RPSSQV
Trigger: CACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGT...GGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CAA 90 bp TGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTaGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGGGCGCTGAGG +
Preference number: 2 (lower is better)
Translates to: CFSFRTILTVVLPAP*GLKWRGMKLRGALR
Trigger: CCTCAGCGCCCCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR TCA 90 bp AGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGCTGGAACATGGATCCTaGGGATGTCTCACCCCATGG +
Preference number: 2 (lower is better)
Translates to: SCAACSLGSEVARDEAQRLEHGS*GCLTPW
Trigger: CCATGGGGTGAGACATCCTCAGGATCCATGTTCCAG...CCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528471.1
3UTR-3UTR GCA 90 bp GCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCACTGTGGCCAGGGTCTaGTTTGTCCTCTGGGCAAAT +
Preference number: 2 (lower is better)
Translates to: AKRRRLSGLGDTDVWTRTTVARV*FVLWAN
Trigger: ATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGT...GGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR GCA 90 bp TGTGTGGACGAGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCTACGTCTTCCCGCCATaGACACAGGCTTTCTTATGT +
Preference number: 2 (lower is better)
Translates to: CVDEDPARCLGTPGRTDLYVFPP*TQAFLC
Trigger: ACATAAGAAAGCCTGTGTGCATGGCGGGAAGACGTA...GAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR GCA 90 bp CTGATCTCACTGTGGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACGGCCATCCTCACAGGTaGATAGGATGCAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: LISLWPGSALSSGQILQHGHPHR*IGCRAR
Trigger: CCTTGCCCTGCATCCTATGCACCTGTGAGGATGGCC...GTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CAA 90 bp CCGCCATGCACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGAGGG +
Preference number: 2 (lower is better)
Translates to: PPCTQAFLCFSFRTI*TVVLPAPLGLKWRG
Trigger: CCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGTGCATGGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR GCA 90 bp GATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTACGTCTTCCCGCCATaGACACAGGCTTTCTTATGT +
Preference number: 2 (lower is better)
Translates to: DLHQVRGLVFQGKATQVVYVFPP*TQAFLC
Trigger: ACATAAGAAAGCCTGTGTGCATGGCGGGAAGACGTA...GACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp TCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGTCTGCTTTGTCCTCTaGGCAAATCTTGCAGCACTT +
Preference number: 2 (lower is better)
Translates to: SPPSPRPRVPGQSDAGCLVCFVL*ANLAAL
Trigger: AAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGAC...CAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp GCTTCCAGAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGTCTGCTTTGTCCTCTaGGCAAATCTTGCAGCACTT +
Preference number: 2 (lower is better)
Translates to: ASRGRSPPSPRPRVPGQSVCFVL*ANLAAL
Trigger: AAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGAC...GCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTCTGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CCA 90 bp GGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCGAGCATCACTGGAACATaGATCCTGAGGATGTCTCAC +
Preference number: 2 (lower is better)
Translates to: GSALSSGQILQHFPATFSSITGT*ILRMSH
Trigger: GTGAGACATCCTCAGGATCCATGTTCCAGTGATGCT...CGAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528471.1
3UTR CAA 90 bp GGGGCCAGCGAGCAGTCGGAAGTGCTGTGCCTCTTTCTGGAAGTCTaGCTTCCTGACTTTCTTGATCTGAGTCAAGTGGAAGATTCCTTT +
Preference number: 2 (lower is better)
Translates to: GASEQSEVLCLFLEV*LPDFLDLSQVEDSF
Trigger: AAAGGAATCTTCCACTTGACTCAGATCAAGAAAGTCAGGAAGCAAGACTTCCAGAAAGAGGCACAGCACTTCCGACTGCTCGCTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
3UTR CAA 90 bp AGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTaGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCTGGGCTAGG +
Preference number: 2 (lower is better)
Translates to: SSYLQLLGLCYVLVT*SGLAVTFSSRVWAR
Trigger: CCTAGCCCAGACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
3UTR-3UTR CCA 90 bp TGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGTTCTCCCAGCATCACTaGAACATGGATCCTGAGGAT +
Preference number: 2 (lower is better)
Translates to: CFSFRTILTVVLPAPLGLFSQHH*NMDPED
Trigger: ATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAA...CAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR GCA 90 bp ATACAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCGGCCATCCTCACAGGTaGATAGGATGCAGGGCAAGG +
Preference number: 2 (lower is better)
Translates to: IQLISATVRSLLCLGHFVGHPHR*IGCRAR
Trigger: CCTTGCCCTGCATCCTATGCACCTGTGAGGATGGCC...GACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
3UTR GCA 72 bp ATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTaGCACACCTCCCCGTGGGAGTACGTCTTCCCGCCA +
Preference number: 3 (lower is better)
Translates to: MQGKGPKARKAG*HTSPWEYVFPP
Trigger: TGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR GCA 72 bp GGCAGTCCTGGCGGCCATCCTCACAGGTGCATAGGATaGAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGT +
Preference number: 3 (lower is better)
Translates to: GSPGGHPHRCIG*RARGRRHGRPG
Trigger: ACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTATGCACCTGTGAGGATGGCCGCCAGGACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 72 bp CCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTaGGAGTACGTCTTCCCGCCATGCACACAGGCTTTC +
Preference number: 3 (lower is better)
Translates to: PKARKAGCHTSP*EYVFPPCTQAF
Trigger: GAAAGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 72 bp CAGCCACTTTCTCGGGGTGACGGCAGGGGTACTCGGTaGGACAGGTCACACGCTGGCAGTCCTGGCGGCCAT +
Preference number: 3 (lower is better)
Translates to: QPLSRGDGRGTR*DRSHAGSPGGH
Trigger: ATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCGAGAAAGTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 72 bp CGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTaGACGAGGACCCGGCCCGGTGCCTTGGGACACCTG +
Preference number: 3 (lower is better)
Translates to: RRRLSGLGDTDV*TRTRPGALGHL
Trigger: CAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 72 bp GTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTaGGGATACCGATGTGTGGACGAGGACCCGGCCCGG +
Preference number: 3 (lower is better)
Translates to: VFQGKATQVVWA*GYRCVDEDPAR
Trigger: CCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 72 bp GGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTaGGCTTGGGGATACCGATGTGTGGACGAGGACCCG +
Preference number: 3 (lower is better)
Translates to: GLVFQGKATQVV*AWGYRCVDEDP
Trigger: CGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CAA 90 bp GTGCATAGGATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: VHRMQGKGPKARKAGCHTSFRTI*TVVLPA
Trigger: AGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGA...GGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CAA 90 bp CGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCTCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: RRRLSGLGDTDVWTRTRPSFRTI*TVVLPA
Trigger: AGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGA...GGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CAA 90 bp CAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCATCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: QGYSVGQVTRWQSWRPSSSFRTI*TVVLPA
Trigger: AGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGA...TGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CAA 90 bp TCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGGCAGGTTGTCTGGGCTaGGGGATACCGATGTGTGGA +
Preference number: 3 (lower is better)
Translates to: STKSEASCSRAKRRRLSGAGCLG*GIPMCG
Trigger: TCCACACATCGGTATCCCCAAGCCCAGACAACCTGC...CCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR TCA 72 bp CAAATCTTGCAGCACTTCCCAGCCACTTTCTCGGGGTaGCGGCAGGGGTACTCGGTGGGACAGGTCACACGC +
Preference number: 3 (lower is better)
Translates to: QILQHFPATFSG*RQGYSVGQVTR
Trigger: GCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCGAGAAAGTGGCTGGGAAGTGCTGCAAGATTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR GCA 72 bp TGGGGATACCGATGTGTGGACGAGGACCCGGCCCGGTaGCTTGGGACACCTGGTAGAACTGATCTCACTGTG +
Preference number: 3 (lower is better)
Translates to: WGYRCVDEDPAR*LGTPGRTDLTV
Trigger: CACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 72 bp GCCCGGGCCTCTCTTTCTCCCAGCATCACTGGAACATaGATCCTGAGGATGTCTCACCCCATGGAGCGACTG +
Preference number: 3 (lower is better)
Translates to: ARASLSPSITGT*ILRMSHPMERL
Trigger: CAGTCGCTCCATGGGGTGAGACATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAAAGAGAGGCCCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528471.1
3UTR-3UTR CAA 90 bp CGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTTCCTCTGGGCAAATCTaGCAGCACTTCCCAGCCACT +
Preference number: 3 (lower is better)
Translates to: RVPGQSDAGCLGLGIPMCSSGQI*QHFPAT
Trigger: AGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGA...ACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CAA 90 bp GTCTTCCCGCCATGCACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTTGGTGCTGCCTGCTCCCTaGGGTCTGAAGTGGCGAGGG +
Preference number: 3 (lower is better)
Translates to: VFPPCTQAFLCFSFRTILVLPAP*GLKWRG
Trigger: CCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCAC...CAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGTGCATGGCGGGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR-3UTR CAA 90 bp CTTCCCGCCATGCACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTTGACGTGCTGCCTGCTCCCTaGGGTCTGAAGTGGCGAGGG +
Preference number: 3 (lower is better)
Translates to: LPAMHTGFLMFLLQDDLDVLPAP*GLKWRG
Trigger: CCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCAC...GTCAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGTGCATGGCGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 72 bp GGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTaGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTG +
Preference number: 3 (lower is better)
Translates to: GALGHLVELISL*PGSALSSGQIL
Trigger: CAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CCA 72 bp ACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTaGACTGGCCGTGACCTTCAGCTCCAGGGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: TVRSLLCLGHFV*TGRDLQLQGLG
Trigger: GCCCAGACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp GGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTAGGCTCCGTCACAGGCTaGGGGCAGTGGACAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GQGAEGTEGRVPHLPVGVGSVTG*GQWTGG
Trigger: TCCGCCTGTCCACTGCCCCCAGCCTGTGACGGAGCC...TACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534276.5
CDS-3UTR CCA 90 bp GGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACGGCAGGGGTACTCGGTaGGACAGGTCACACGCTGGC +
Preference number: 4 (lower is better)
Translates to: GKGPKARKAGCHTSPWEYGRGTR*DRSHAG
Trigger: GCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCC...GTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTATGCCACACCTCCCCGTaGGAGTACGTCTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: GQGAEGTEGRVPHLPVGVCHTSP*EYVFPP
Trigger: TGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCA...TACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ATAGGATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCTGGCAGGACTTTGGTaGGGCCCGGAGTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: IGCRARGRRHGRPGATPPLAGLW*GPESRG
Trigger: CCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAG...GGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GTGCATAGGATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCGGACAGGTCACACGCTaGCAGTCCTGGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: VHRMQGKGPKARKAGCHTGQVTR*QSWRPS
Trigger: GGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCC...GGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTATGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp AGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGGCAGGGGTACTCGGTaGGACAGGTCACACGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHGRPGATPPRGSTSSRHGRGTR*DRSHAG
Trigger: GCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCC...ATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GCCGGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTGGCCCTCTGTGCAGCTaGAGAGGACACACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AGCHTSPWEYVFPPCTQAGPLCS*RGHTGW
Trigger: CCAACCAGTGTGTCCTCTGCAGCTGCACAGAGGGCC...AGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR GCA 90 bp GGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACTGGCAAACCGACCAGTaGCATGTTAGTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GKGPKARKAGCHTSPWEYWQTDQ*HVSPRR
Trigger: CCTCCTGGGACTAACATGGCACTGGTCGGTTTGCCA...GTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCGGATGTCTCACCCCATaGAGCGACTGCACACTGTCC +
Preference number: 4 (lower is better)
Translates to: GDGRGTRWDRSHAGSPGGGCLTP*SDCTLS
Trigger: GGACAGTGTGCAGTCGCTCCATGGGGTGAGACATCC...GCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACCCCTTGGGTCTGAAGTaGCGAGGGATGAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GKGPKARKAGCHTSPWEYPLGLK*RGMKLR
Trigger: TCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGG...GTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCACACGCTGGCAGTCCTaGCGGCCATCCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: TRWDRSHAGSPGGHPHRCTRWQS*RPSSQV
Trigger: CACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGT...GCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCGCGACGCAGGTTGTCTaGGCTTGGGGATACCGATGT +
Preference number: 4 (lower is better)
Translates to: VTAGVLGGTGHTLAVLAAATQVV*AWGYRC
Trigger: ACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGC...GGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CGGGGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGCGACGCAGGTTGTCTaGGCTTGGGGATACCGATGT +
Preference number: 4 (lower is better)
Translates to: RGDGRGTRWDRSHAGSPGATQVV*AWGYRC
Trigger: ACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGC...GCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CAA 72 bp CGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTaGGGGATACCGATGTGTGGACGAGGACCCGGCCCG +
Preference number: 4 (lower is better)
Translates to: RVPGQSDAGCLG*GIPMCGRGPGP
Trigger: CGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp GCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACGACAGCTCATGGGCACTaGAGATCTCTCCGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: ARGRRHGRPGATPPRGSTTAHGH*RSLRVG
Trigger: ACCAACACGGAGAGATCTTCAGTGCCCATGAGCTGT...CGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GCCGGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTGGCCATCCTCACAGGTaGATAGGATGCAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: AGCHTSPWEYVFPPCTQAGHPHR*IGCRAR
Trigger: CCTTGCCCTGCATCCTATGCACCTGTGAGGATGGCC...AGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp AGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCGTGCTGGCAGGACTTTaGTGGGGCCCGGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SDAGCLGLGIPMCGRGPGVLAGL*WGPESR
Trigger: TCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCAC...GCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGGGGGATACCGATGTGTaGACGAGGACCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: STKSEASCSRAKRRRLSGGDTDV*TRTRPG
Trigger: ACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCC...CCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp GTGCATAGGATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCCTGGAACATGGATCCTaGGGATGTCTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: VHRMQGKGPKARKAGCHTLEHGS*GCLTPW
Trigger: CCATGGGGTGAGACATCCTCAGGATCCATGTTCCAG...GGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp ATAGGATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCCTTCAGGACGATCTTaGCAGTTGTGCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: IGCRARGRRHGRPGATPPPSGRS*QLCCLL
Trigger: GAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGG...GGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp GGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCAGGGTAAGTTACACCTaGGGGCCACACAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: GDGRGTRWDRSHAGSPGGRVSYT*GPHSKS
Trigger: TGACTTGCTGTGTGGCCCTCAGGTGTAACTTACCCT...GCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GCCGGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTTACATGGTCCCGTTGTaGTGGCAGGACTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AGCHTSPWEYVFPPCTQAYMVPL*WQDFGG
Trigger: CCCACCAAAGTCCTGCCAGCACAACGGGACCATGTA...AGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTTTCCACAGGTGCATAGGATaGAGGGCAAGGGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GCHTSPWEYVFPPCTQAFHRCIG*RARGRR
Trigger: CCTTCGGCCCCTTGCCCTGCATCCTATGCACCTGTG...GAAAGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GCCGGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTTGGCAAACCGACCAGTaGCATGTTAGTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AGCHTSPWEYVFPPCTQAWQTDQ*HVSPRR
Trigger: CCTCCTGGGACTAACATGGCACTGGTCGGTTTGCCA...AGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAATGGTCCCGTTGTGCTaGCAGGACTTTGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: RWDRSHAGSPGGHPHRCIMVPLC*QDFGGA
Trigger: GGCCCCACCAAAGTCCTGCCAGCACAACGGGACCAT...TATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCGGTCTCCGTGTTGGTACATaGTCCCGTTGTGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRLSGLGDTDVWTRTRPGLRVGT*SRCAGR
Trigger: CCTGCCAGCACAACGGGACCATGTACCAACACGGAG...ACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTCTGCAGAGGACACACTaGTTGGGCAGGCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TKSEASCSRAKRRRLSGLLQRTH*LGRREG
Trigger: CCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTGCAG...AAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCTCATCTTTGCAGGCCTaGCAGCAGGAGTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: ATQVVWAWGYRCVDEDPASSLQA*QQESGS
Trigger: GCTGCCAGACTCCTGCTGCCAGGCCTGCAAAGATGA...GGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp ACGAGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGTGCCACACCTCCCCGTaGGAGTACGTCTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: TRTRPGALGHLVELISLWCHTSP*EYVFPP
Trigger: TGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCA...CCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCGGCAGGGGTACTCGGTaGGACAGGTCACACGCTGGC +
Preference number: 4 (lower is better)
Translates to: DLHQVRGLVFQGKATQVVGRGTR*DRSHAG
Trigger: GCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCC...GACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACATACATGGTCCCGTTGTaGTGGCAGGACTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GVLGGTGHTLAVLAAILTYMVPL*WQDFGG
Trigger: CCCACCAAAGTCCTGCCAGCACAACGGGACCATGTA...TGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp AGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCGGCCATCCTCACAGGTaGATAGGATGCAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: SDAGCLGLGIPMCGRGPGGHPHR*IGCRAR
Trigger: CCTTGCCCTGCATCCTATGCACCTGTGAGGATGGCC...GCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GCCGGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTACTGTGGCCAGGGTCTaGTTTGTCCTCTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: AGCHTSPWEYVFPPCTQATVARV*FVLWAN
Trigger: ATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGT...AGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGATGGTCCCGTTGTGCTaGCAGGACTTTGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: STKSEASCSRAKRRRLSGMVPLC*QDFGGA
Trigger: GGCCCCACCAAAGTCCTGCCAGCACAACGGGACCAT...CCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACCCTTGGGTCTGAAGTaGCGAGGGATGAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QGYSVGQVTRWQSWRPSSPLGLK*RGMKLR
Trigger: TCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGG...TGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCCAGGTTGTCTGGGCTTaGGGATACCGATGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: RRRLSGLGDTDVWTRTRPQVVWA*GYRCVD
Trigger: GTCCACACATCGGTATCCCCAAGCCCAGACAACCTG...GGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTAAATCTGCTAGACAACTaGGCATGCTCTCCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: GQGAEGTEGRVPHLPVGVNLLDN*ACSPRQ
Trigger: TTGCCTAGGAGAGCATGCCCAGTTGTCTAGCAGATT...TACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CAA 72 bp TCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTaGTCTGGGCTTGGGGATACCGATGTGTGGACGAGG +
Preference number: 4 (lower is better)
Translates to: SEASCSRAKRRR*SGLGDTDVWTR
Trigger: CCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp AGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCTTCAGGACGATCTTaGCAGTTGTGCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SDAGCLGLGIPMCGRGPGPSGRS*QLCCLL
Trigger: GAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGG...GCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp CAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCAAGGGTAAGTTACACCTaGGGGCCACACAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: QGYSVGQVTRWQSWRPSSRVSYT*GPHSKS
Trigger: TGACTTGCTGTGTGGCCCTCAGGTGTAACTTACCCT...TGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp CCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCCACTTGCCTCATCTTTaGAGGCCTGGCAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PARCLGTPGRTDLTVARVHLPHL*RPGSRS
Trigger: ACTCCTGCTGCCAGGCCTGCAAAGATGAGGCAAGTG...GACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR GCA 90 bp CGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAACCCCATGGAGCGACTaGACACTGTCCTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: RWDRSHAGSPGGHPHRCITPWSD*TLSSSS
Trigger: GGATGAAGAGGACAGTGTGCAGTCGCTCCATGGGGT...TATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp TCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGCACAGGTGCATAGGATaGAGGGCAAGGGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SPPSPRPRVPGQSDAGCLHRCIG*RARGRR
Trigger: CCTTCGGCCCCTTGCCCTGCATCCTATGCACCTGTG...CAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp ACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTCACAGGTGCATAGGATaGAGGGCAAGGGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: TKSEASCSRAKRRRLSGLHRCIG*RARGRR
Trigger: CCTTCGGCCCCTTGCCCTGCATCCTATGCACCTGTG...AAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GCCGGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTACCACACACTTACTGTaGAACACTGGGCATGCCACT +
Preference number: 4 (lower is better)
Translates to: AGCHTSPWEYVFPPCTQATTHLL*NTGHAT
Trigger: AGTGGCATGCCCAGTGTTGCACAGTAAGTGTGTGGT...AGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGATGGTCCCGTTGTGCTaGCAGGACTTTGGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: EVDLHQVRGLVFQGKATQMVPLC*QDFGGA
Trigger: GGCCCCACCAAAGTCCTGCCAGCACAACGGGACCAT...CTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ACGAGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCTCCGTGTTGGTACATaGTCCCGTTGTGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TRTRPGALGHLVELISLWLRVGT*SRCAGR
Trigger: CCTGCCAGCACAACGGGACCATGTACCAACACGGAG...CCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCGAGGGGAACAGCTCATaGGCACTGAAGATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: PARCLGTPGRTDLTVARVEGNSS*ALKISP
Trigger: CGGAGAGATCTTCAGTGCCCATGAGCTGTTCCCCTC...GACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCAGCATCACTGGAACATaGATCCTGAGGATGTCTCAC +
Preference number: 4 (lower is better)
Translates to: VTAGVLGGTGHTLAVLAASITGT*ILRMSH
Trigger: GTGAGACATCCTCAGGATCCATGTTCCAGTGATGCT...GGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCTGGGCTAGGACACGCTGGCAGTCCTaGCGGCCATCCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: LVTLSGLAVTFSSRVWARTRWQS*RPSSQV
Trigger: CACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGT...CCTAGCCCAGACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp TGTCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCGGGGTGACGGCACACGCTGGCAGTCCTaGCGGCCATCCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: CPLGKSCSTSQPLSRGDGTRWQS*RPSSQV
Trigger: CACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGT...GCCGTCACCCCGAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGGGACAGGTCACACGCTaGCAGTCCTGGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LQDDLDSCAACSLGSEVAGQVTR*QSWRPS
Trigger: GGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCC...CGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCGAACTGATCTCACTGTaGCCAGGGTCTGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TRWDRSHAGSPGGHPHRCELISL*PGSALS
Trigger: GGACAAAGCAGACCCTGGCCACAGTGAGATCAGTTC...GCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp CCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCACAGCTCATGGGCACTaGAGATCTCTCCGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PARCLGTPGRTDLTVARVTAHGH*RSLRVG
Trigger: ACCAACACGGAGAGATCTTCAGTGCCCATGAGCTGT...GACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp AGCCACTTTCTCGGGGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGACAGCTCATGGGCACTaGAGATCTCTCCGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SHFLGVTAGVLGGTGHTLTAHGH*RSLRVG
Trigger: ACCAACACGGAGAGATCTTCAGTGCCCATGAGCTGT...CAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCGAGAAAGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGCACTTGGGACAGCATTaGTGTGGCTCCGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: EVDLHQVRGLVFQGKATQHLGQH*CGSVTG
Trigger: GCCTGTGACGGAGCCACAGCAATGCTGTCCCAAGTG...CTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534276.5
CDS-3UTR GCA 90 bp TGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGGGCGCTGAGGCCACTGTGGCCAGGGTCTaGTTTGTCCTCTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: CSLGSEVARDEAQRGAEATVARV*FVLWAN
Trigger: ATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGT...GGCCTCAGCGCCCCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTGTACATCAGGCCTTGTaGCTCCAAGTAGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: HQVRGLVFQGKATQVVWAVHQAL*LQVGVP
Trigger: TGGCACCCCTACTTGGAGCCACAAGGCCTGATGTAC...AGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCTGCTTTGTCCTGGCAGGACTTTGGTaGGGCCCGGAGTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CLGTPGRTDLTVARVCFVLAGLW*GPESRG
Trigger: CCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAG...GACAAAGCAGACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCCTCCGTGTTGGTACATaGTCCCGTTGTGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: DLHQVRGLVFQGKATQVVLRVGT*SRCAGR
Trigger: CCTGCCAGCACAACGGGACCATGTACCAACACGGAG...GACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCAAGATCTCTCCGTGTTaGTACATGGTCCCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TRWDRSHAGSPGGHPHRCKISPC*YMVPLC
Trigger: GCACAACGGGACCATGTACCAACACGGAGAGATCTT...GCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAAAGATCTCTCCGTGTTaGTACATGGTCCCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: GVLGGTGHTLAVLAAILTKISPC*YMVPLC
Trigger: GCACAACGGGACCATGTACCAACACGGAGAGATCTT...TGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCTGCTTTGTCCTGCAGAGGACACACTaGTTGGGCAGGCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CLGTPGRTDLTVARVCFVLQRTH*LGRREG
Trigger: CCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTGCAG...GACAAAGCAGACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp AGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAGGATGCAGGCCCTTGGGTCTGAAGTaGCGAGGGATGAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: RSHAGSPGGHPHRCIGCRPLGLK*RGMKLR
Trigger: TCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGG...CCTGCATCCTATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TCTCACCCCATGGAGCGACTGCACACTGTCCTCTTCATCCGATTGCTCACTTGCGGGGATACCGATGTGTaGACGAGGACCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: SHPMERLHTVLFIRLLTCGDTDV*TRTRPG
Trigger: ACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCC...GCAAGTGAGCAATCGGATGAAGAGGACAGTGTGCAGTCGCTCCATGGGGTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528471.1
CDS-3UTR CCA 90 bp CTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGCAGGTTGTCTGGGCTTaGGGATACCGATGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: LHQVRGLVFQGKATQVVWQVVWA*GYRCVD
Trigger: GTCCACACATCGGTATCCCCAAGCCCAGACAACCTG...CCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGCGACGCAGGTTGTCTaGGCTTGGGGATACCGATGT +
Preference number: 4 (lower is better)
Translates to: SPPSPRPRVPGQSDAGCLATQVV*AWGYRC
Trigger: ACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGC...CAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp GCCAGCGAGCAGTCGGAAGTGCTGTGCCTCTTTCTGGAAGTCTTGCTTCCTGACTGTCTGGACTGGCCGTaGCCTTCAGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASEQSEVLCLFLEVLLPDCLDWP*PSAPGS
Trigger: AGACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACA...GTCAGGAAGCAAGACTTCCAGAAAGAGGCACAGCACTTCCGACTGCTCGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR GCA 90 bp CAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGACCCCATGGAGCGACTaGACACTGTCCTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: QGKATQVVWAWGYRCVDETPWSD*TLSSSS
Trigger: GGATGAAGAGGACAGTGTGCAGTCGCTCCATGGGGT...CTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACATACGTCTTCCCGCCATaGACACAGGCTTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: GVLGGTGHTLAVLAAILTYVFPP*TQAFLC
Trigger: ACATAAGAAAGCCTGTGTGCATGGCGGGAAGACGTA...TGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp AGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAGGATGCAGGAGTCCCACGCTCCTCTaGCCTCACAATCATGCTTGT +
Preference number: 4 (lower is better)
Translates to: RSHAGSPGGHPHRCIGCRSPTLL*PHNHAC
Trigger: ACAAGCATGATTGTGAGGGCAGAGGAGCGTGGGACT...CCTGCATCCTATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp CCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCTCACTTGCCTCATTGTaGAGCTGCAGAGGACACACT +
Preference number: 4 (lower is better)
Translates to: PARCLGTPGRTDLTVARVSLASL*SCRGHT
Trigger: AGTGTGTCCTCTGCAGCTGCACAATGAGGCAAGTGA...GACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGTACATCAGGCCTTGTaGCTCCAAGTAGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TKSEASCSRAKRRRLSGLVHQAL*LQVGVP
Trigger: TGGCACCCCTACTTGGAGCCACAAGGCCTGATGTAC...AAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CTGATCTCACTGTGGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACGGGACAGCATTGCTGTaGCTCCGTCACAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LISLWPGSALSSGQILQHGTALL*LRHRLG
Trigger: CCCCAGCCTGTGACGGAGCCACAGCAATGCTGTCCC...GTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534276.5
CDS-3UTR CCA 90 bp GAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGAGGTTCCACACACTTaGGACAGCATTGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: EASCSRAKRRRLSGLGDTEVPHT*DSIAVA
Trigger: AGCCACAGCAATGCTGTCCCAAGTGTGTGGAACCTC...GGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534276.5
CDS-3UTR CCA 90 bp CAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGAGGGGAACAGCTCATaGGCACTGAAGATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: QGKATQVVWAWGYRCVDEEGNSS*ALKISP
Trigger: CGGAGAGATCTTCAGTGCCCATGAGCTGTTCCCCTC...CTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCAAGCATCACTGGAACATaGATCCTGAGGATGTCTCAC +
Preference number: 4 (lower is better)
Translates to: QGYSVGQVTRWQSWRPSSSITGT*ILRMSH
Trigger: GTGAGACATCCTCAGGATCCATGTTCCAGTGATGCT...TGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCGTCTGCTTTGTCCTCTaGGCAAATCTTGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: ATQVVWAWGYRCVDEDPAVCFVL*ANLAAL
Trigger: AAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGAC...GGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTTTCTTTTCAGCTCCAGGGTCTaGGCTAGGAAGACGTTCCAG +
Preference number: 4 (lower is better)
Translates to: VPHLPVGVRLPAMHTGFLFSSRV*ARKTFQ
Trigger: CTGGAACGTCTTCCTAGCCCAGACCCTGGAGCTGAA...AAGAAAGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR TCA 90 bp GCTTCCAGAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCCCTTCAGGACGATCTTaGCAGTTGTGCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ASRGRSPPSPRPRVPGQSPSGRS*QLCCLL
Trigger: GAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGG...GCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTCTGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp TATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCTGGCACAGGTGCATAGGATaGAGGGCAAGGGGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: YVLVTLSGLAVTFSSRVWHRCIG*RARGRR
Trigger: CCTTCGGCCCCTTGCCCTGCATCCTATGCACCTGTG...CCAGACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR GCA 90 bp GCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCCTCTGGGCAAATCTTaGAGCACTTCCCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: AKRRRLSGLGDTDVWTRTPLGKS*STSQPL
Trigger: AAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGG...GGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAGGATGCAGGGCTCCTCTTCATCCGATTaGTCACTTGCCTCATTGTGC +
Preference number: 4 (lower is better)
Translates to: VTRWQSWRPSSQVHRMQGSSSSD*SLASLC
Trigger: GCACAATGAGGCAAGTGAGCAATCGGATGAAGAGGA...GCCCTGCATCCTATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGGTGCTGGCAGGACTTTaGTGGGGCCCGGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: CFSFRTILTVVLPAPLGLVLAGL*WGPESR
Trigger: TCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCAC...CAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGAGAGGGGAACAGCTCATaGGCACTGAAGATCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VPGQSDAGCLGLGIPMCGEGNSS*ALKISP
Trigger: CGGAGAGATCTTCAGTGCCCATGAGCTGTTCCCCTC...TCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAAGCATCACTGGAACATaGATCCTGAGGATGTCTCAC +
Preference number: 4 (lower is better)
Translates to: RWDRSHAGSPGGHPHRCISITGT*ILRMSH
Trigger: GTGAGACATCCTCAGGATCCATGTTCCAGTGATGCT...TATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGGGCGCTGAGTTCTCCCAGCATCACTaGAACATGGATCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: ACSLGSEVARDEAQRGAEFSQHH*NMDPED
Trigger: ATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAA...CTCAGCGCCCCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCTTCTCCCAGCATCACTaGAACATGGATCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PARCLGTPGRTDLTVARVFSQHH*NMDPED
Trigger: ATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAA...GACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCACACGCTGGCAGTCCTaGCGGCCATCCTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: CYVLVTLSGLAVTFSSRVTRWQS*RPSSQV
Trigger: CACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGT...GACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp GCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCGAACTGATCTCACTGTaGCCAGGGTCTGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: AKRRRLSGLGDTDVWTRTELISL*PGSALS
Trigger: GGACAAAGCAGACCCTGGCCACAGTGAGATCAGTTC...GGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTTTCAATCTGCTAGACAACTaGGCATGCTCTCCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: GCHTSPWEYVFPPCTQAFNLLDN*ACSPRQ
Trigger: TTGCCTAGGAGAGCATGCCCAGTTGTCTAGCAGATT...GAAAGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp GTCTTCCCGCCATGCACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTTGCACATGGGCGCCCTCTaGGCAGGTACAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: VFPPCTQAFLCFSFRTILHMGAL*AGTAQA
Trigger: TGCCTGCGCTGTACCTGCTCAGAGGGCGCCCATGTG...CAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGTGCATGGCGGGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534276.5
CDS-3UTR TCA 90 bp ATGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGTTCGGGGCAGGTTGTaGGGCCGCAGTAGATCTGGC +
Preference number: 4 (lower is better)
Translates to: MFLLQDDLDSCAACSLGSVRGRL*GRSRSG
Trigger: GCCAGATCTACTGCGGCCTCACAACCTGCCCCGAAC...AGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR TCA 90 bp CAGCTTCCAGAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAACTGGAACATGGATCCTaGGGATGTCTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: QLPEVDLHQVRGLVFQGKLEHGS*GCLTPW
Trigger: CCATGGGGTGAGACATCCTCAGGATCCATGTTCCAG...TTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTCTGGAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp TCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGAGGGTAAGTTACACCTaGGGGCCACACAGCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SCSRAKRRRLSGLGDTDVRVSYT*GPHSKS
Trigger: TGACTTGCTGTGTGGCCCTCAGGTGTAACTTACCCT...CACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp TCTCACCCCATGGAGCGACTGCACACTGTCCTCTTCATCCGATTGCTCACTTGCGAGTGTGAGGTTCTCTaGGCAGGTACAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SHPMERLHTVLFIRLLTCECEVL*AGTAQA
Trigger: TGCCTGCGCTGTACCTGCTCAGAGAACCTCACACTC...GCAAGTGAGCAATCGGATGAAGAGGACAGTGTGCAGTCGCTCCATGGGGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528471.1
CDS-3UTR GCA 90 bp AGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAGGATGCAGGTACGTCTTCCCGCCATaGACACAGGCTTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: RSHAGSPGGHPHRCIGCRYVFPP*TQAFLC
Trigger: ACATAAGAAAGCCTGTGTGCATGGCGGGAAGACGTA...CCTGCATCCTATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCGGGCCATCCTCACAGGTaGATAGGATGCAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GSALSSGQILQHFPATFSGHPHR*IGCRAR
Trigger: CCTTGCCCTGCATCCTATGCACCTGTGAGGATGGCC...CGAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp TGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTTTCTTAACTGTGGCCAGGGTCTaGTTTGTCCTCTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: CHTSPWEYVFPPCTQAFLTVARV*FVLWAN
Trigger: ATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGT...TAAGAAAGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp CGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTAGTCCCACGCTCCTCTaGCCTCACAATCATGCTTGT +
Preference number: 4 (lower is better)
Translates to: RVPGQSDAGCLGLGIPMCSPTLL*PHNHAC
Trigger: ACAAGCATGATTGTGAGGGCAGAGGAGCGTGGGACT...ACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp TGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGAGTCCCACGCTCCTCTaGCCTCACAATCATGCTTGT +
Preference number: 4 (lower is better)
Translates to: CSRAKRRRLSGLGDTDVWSPTLL*PHNHAC
Trigger: ACAAGCATGATTGTGAGGGCAGAGGAGCGTGGGACT...CCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGACCACACACTTACTGTaGAACACTGGGCATGCCACT +
Preference number: 4 (lower is better)
Translates to: EVDLHQVRGLVFQGKATQTTHLL*NTGHAT
Trigger: AGTGGCATGCCCAGTGTTGCACAGTAAGTGTGTGGT...CTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CTTCCCGCCATGCACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTTGACCTGGCAGGACTTTGGTaGGGCCCGGAGTCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LPAMHTGFLMFLLQDDLDLAGLW*GPESRG
Trigger: CCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAG...GTCAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGTGCATGGCGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTAAGATCTCTCCGTGTTaGTACATGGTCCCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TKSEASCSRAKRRRLSGLKISPC*YMVPLC
Trigger: GCACAACGGGACCATGTACCAACACGGAGAGATCTT...AAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTCAGCGGGAGGGGTGCTaGGCAGCCTGGTTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: SATVRSLLCLGHFVWTGRQREGC*AAWFGA
Trigger: TGCCCCGAACCAGGCTGCCCAGCACCCCTCCCGCTG...ACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp TGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCTGCTTTGTCGGATGTCTCACCCCATaGAGCGACTGCACACTGTCC +
Preference number: 4 (lower is better)
Translates to: CLGTPGRTDLTVARVCFVGCLTP*SDCTLS
Trigger: GGACAGTGTGCAGTCGCTCCATGGGGTGAGACATCC...GACAAAGCAGACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGTGCCACACCTCCCCGTaGGAGTACGTCTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LCYVLVTLSGLAVTFSSRCHTSP*EYVFPP
Trigger: TGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCA...CCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp AGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCGGACAGGTCACACGCTaGCAGTCCTGGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: RSLLCLGHFVWTGRDLQLGQVTR*QSWRPS
Trigger: GGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCC...GAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp AAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGTCTGCTTTGTCCTCTaGGCAAATCTTGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: KSEASCSRAKRRRLSGLGVCFVL*ANLAAL
Trigger: AAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGAC...CCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GCCAGCGAGCAGTCGGAAGTGCTGTGCCTCTTTCTGGAAGTCTTGCTTCCTGACCAGGTTGTCTGGGCTTaGGGATACCGATGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: ASEQSEVLCLFLEVLLPDQVVWA*GYRCVD
Trigger: GTCCACACATCGGTATCCCCAAGCCCAGACAACCTG...GTCAGGAAGCAAGACTTCCAGAAAGAGGCACAGCACTTCCGACTGCTCGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp GCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCGTCTTTGTTATGTCTTaGTCACTTTGTCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: ATQVVWAWGYRCVDEDPAVFVMS*SLCLDW
Trigger: CCAGTCCAGACAAAGTGACCAAGACATAACAAAGAC...GGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR TCA 90 bp TGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGGGTCTGCTTTGTCAGTCCAGAGGGAGTGTaGGGTTCCACACACTTGGGA +
Preference number: 4 (lower is better)
Translates to: CLGTPGRTDLTVARVCFVSPEGV*GSTHLG
Trigger: TCCCAAGTGTGTGGAACCTCACACTCCCTCTGGACT...GACAAAGCAGACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534276.5
CDS-3UTR GCA 90 bp GTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCACACAGGCTTTCTTTACGTCTTCCCGCCATaGACACAGGCTTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: VPHLPVGVRLPAMHTGFLYVFPP*TQAFLC
Trigger: ACATAAGAAAGCCTGTGTGCATGGCGGGAAGACGTA...AAGAAAGCCTGTGTGCATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp CTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGCCTCTGGGCAAATCTTaGAGCACTTCCCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: LQDDLDSCAACSLGSEVAPLGKS*STSQPL
Trigger: AAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGG...CGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp GTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGATCACTTGCCTCATTGTaGAGCTGCAGAGGACACACT +
Preference number: 4 (lower is better)
Translates to: VPGQSDAGCLGLGIPMCGSLASL*SCRGHT
Trigger: AGTGTGTCCTCTGCAGCTGCACAATGAGGCAAGTGA...TCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGGGGTGCTGGGCAGCCTaGTTCGGGGCAGGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: VRSLLCLGHFVWTGRDLQGCWAA*FGAGCE
Trigger: CTCACAACCTGCCCCGAACCAGGCTGCCCAGCACCC...CTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp GCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACGGCAGGGGTACTCGGTaGGACAGGTCACACGCTGGC +
Preference number: 4 (lower is better)
Translates to: ATVRSLLCLGHFVWTGRDGRGTR*DRSHAG
Trigger: GCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCC...GTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp CCGCCATGCACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTTGACAGTTGGGGATACCGATGTGTaGACGAGGACCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PPCTQAFLCFSFRTILTVGDTDV*TRTRPG
Trigger: ACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCC...AACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGTGCATGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGAAAAGAGATGTCATCTaGGCCACTCAGGCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: LHQVRGLVFQGKATQVVWKRDVI*ATQAKE
Trigger: CTCTTTTGCCTGAGTGGCCCAGATGACATCTCTTTT...CCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CTGATCTCACTGTGGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACAAGGCAGAACATGTCTaGGCCTGGCAAACCGACCAG +
Preference number: 4 (lower is better)
Translates to: LISLWPGSALSSGQILQHKAEHV*AWQTDQ
Trigger: CTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTT...GTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TCTCACTGTGGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCAAGGCAGAACATGTCTaGGCCTGGCAAACCGACCAG +
Preference number: 4 (lower is better)
Translates to: SHCGQGLLCPLGKSCSTSKAEHV*AWQTDQ
Trigger: CTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTT...GGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp TGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGCTGGAACATGGATCCTaGGGATGTCTCACCCCATGG +
Preference number: 4 (lower is better)
Translates to: CFSFRTILTVVLPAPLGLLEHGS*GCLTPW
Trigger: CCATGGGGTGAGACATCCTCAGGATCCATGTTCCAG...CAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp AGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCAGTCCAGAGGGAGTGTaGGGTTCTCTGAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: RVCFVLWANLAALPSHFLSPEGV*GSLSRY
Trigger: GTACCTGCTCAGAGAACCTCACACTCCCTCTGGACT...GAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000528471.1
CDS-3UTR TCA 90 bp AACATGGATCCTGAGGATGTCTCACCCCATGGAGCGACTGCACACTGTCCTCTTAGTCCAGAGGGAGTGTaGGGTTCTCTGAGCAGGTAC +
Preference number: 4 (lower is better)
Translates to: NMDPEDVSPHGATAHCPLSPEGV*GSLSRY
Trigger: GTACCTGCTCAGAGAACCTCACACTCCCTCTGGACT...AAGAGGACAGTGTGCAGTCGCTCCATGGGGTGAGACATCCTCAGGATCCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528471.1
CDS-3UTR GCA 90 bp TTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTACATGGTCCCGTTGTaGTGGCAGGACTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FSFRTILTVVLPAPLGLKYMVPL*WQDFGG
Trigger: CCCACCAAAGTCCTGCCAGCACAACGGGACCATGTA...CTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp TGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCAGATCTGGCCCTCTGTaGAGCTGCAGAGGACACACT +
Preference number: 4 (lower is better)
Translates to: CYVLVTLSGLAVTFSSRVRSGPL*SCRGHT
Trigger: AGTGTGTCCTCTGCAGCTGCACAGAGGGCCAGATCT...GACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR GCA 90 bp TTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCAAACCGACCAGTaGCATGTTAGTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FSFRTILTVVLPAPLGLKWQTDQ*HVSPRR
Trigger: CCTCCTGGGACTAACATGGCACTGGTCGGTTTGCCA...CTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp TGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGGCCTCATTGTGCAGCTaGAGAGGACACACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CFSFRTILTVVLPAPLGLASLCS*RGHTGW
Trigger: CCAACCAGTGTGTCCTCTGCAGCTGCACAATGAGGC...CAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp AGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGTCCTCTTCATCCGATTaGTCACTTGCCTCATTGTGC +
Preference number: 4 (lower is better)
Translates to: SCAACSLGSEVARDEAQRSSSSD*SLASLC
Trigger: GCACAATGAGGCAAGTGAGCAATCGGATGAAGAGGA...CCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGGGCGAGTATCTCTTCCCATaGAAAAGGCAGAACATGTCT +
Preference number: 4 (lower is better)
Translates to: CAACSLGSEVARDEAQRGEYLFP*KRQNMS
Trigger: AGACATGTTCTGCCTTTTCCATGGGAAGAGATACTC...GCCCCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GCCATGCACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTTGACAGTTGTCTGCAGAGGACACACTaGTTGGGCAGGCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AMHTGFLMFLLQDDLDSCLQRTH*LGRREG
Trigger: CCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTGCAG...ACAACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGTGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTGCCACACCTCCCCGTaGGAGTACGTCTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LGLCYVLVTLSGLAVTFSCHTSP*EYVFPP
Trigger: TGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCA...GCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp TTTCTTATGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGACAGGTCACACGCTaGCAGTCCTGGCGGCCATCC +
Preference number: 4 (lower is better)
Translates to: FLMFLLQDDLDSCAACSLGQVTR*QSWRPS
Trigger: GGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCC...AAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGTCTGCTTTGTCCTCTaGGCAAATCTTGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: RVPGQSDAGCLGLGIPMCVCFVL*ANLAAL
Trigger: AAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGAC...ACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCGCGACGCAGGTTGTCTaGGCTTGGGGATACCGATGT +
Preference number: 4 (lower is better)
Translates to: GLCYVLVTLSGLAVTFSSATQVV*AWGYRC
Trigger: ACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGC...GGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp TGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGGCAGAACATGTCTaGGCCTGGCAAACCGACCAG +
Preference number: 4 (lower is better)
Translates to: CFSFRTILTVVLPAPLGLKAEHV*AWQTDQ
Trigger: CTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTT...CAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp TTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTGTCTGGACTGGCCGTaGCCTTCAGCTCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGLCYVLVTLSGLAVTFSCLDWP*PSAPGS
Trigger: AGACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACA...GCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR GCA 90 bp GGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCGATCCGATTGCTCACTTaGCTCATCTTTGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSALSSGQILQHFPATFSIRLLT*LIFAGL
Trigger: CAGGCCTGCAAAGATGAGGCAAGTGAGCAATCGGAT...CGAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR GCA 90 bp GCTTCCAGAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCTCCTCTTCATCCGATTaGTCACTTGCCTCATCTTTG +
Preference number: 4 (lower is better)
Translates to: ASRGRSPPSPRPRVPGQSSSSSD*SLASSL
Trigger: CAAAGATGAGGCAAGTGAGCAATCGGATGAAGAGGA...GCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTCTGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR GCA 90 bp TGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCACTGTGGCCAGGGTCTaGTTTGTCCTCTGGGCAAAT +
Preference number: 4 (lower is better)
Translates to: CYVLVTLSGLAVTFSSRVTVARV*FVLWAN
Trigger: ATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGT...GACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp TTTCTTATGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGTGCTGGCAGGACTTTaGTGGGGCCCGGAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: FLMFLLQDDLDSCAACSLVLAGL*WGPESR
Trigger: TCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCAC...AAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp CAGCTTCCAGAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAATTCTCCCAGCATCACTaGAACATGGATCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: QLPEVDLHQVRGLVFQGKFSQHH*NMDPED
Trigger: ATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAA...TTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTCTGGAAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp AACATGGATCCTGAGGATGTCTCACCCCATGGAGCGACTGCACACTGTCCTCTTGAACTGATCTCACTGTaGCCAGGGTCTGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: NMDPEDVSPHGATAHCPLELISL*PGSALS
Trigger: GGACAAAGCAGACCCTGGCCACAGTGAGATCAGTTC...AAGAGGACAGTGTGCAGTCGCTCCATGGGGTGAGACATCCTCAGGATCCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528471.1
CDS-3UTR CCA 90 bp GGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCCAGGTTGTCTGGGCTTaGGGATACCGATGTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GLCYVLVTLSGLAVTFSSQVVWA*GYRCVD
Trigger: GTCCACACATCGGTATCCCCAAGCCCAGACAACCTG...GGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR GCA 90 bp GCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACGGCCATCCTCACAGGTaGATAGGATGCAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ATVRSLLCLGHFVWTGRDGHPHR*IGCRAR
Trigger: CCTTGCCCTGCATCCTATGCACCTGTGAGGATGGCC...GTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR GCA 90 bp TGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCACCACACACTTACTGTaGAACACTGGGCATGCCACT +
Preference number: 4 (lower is better)
Translates to: CYVLVTLSGLAVTFSSRVTTHLL*NTGHAT
Trigger: AGTGGCATGCCCAGTGTTGCACAGTAAGTGTGTGGT...GACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR GCA 90 bp CTTCCCGCCATGCACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTTGACGCCTCATTGTGCAGCTaGAGAGGACACACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LPAMHTGFLMFLLQDDLDASLCS*RGHTGW
Trigger: CCAACCAGTGTGTCCTCTGCAGCTGCACAATGAGGC...GTCAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGTGCATGGCGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp TCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGGAGTATCTCTTCCCATaGAAAAGGCAGAACATGTCT +
Preference number: 4 (lower is better)
Translates to: SCSRAKRRRLSGLGDTDVEYLFP*KRQNMS
Trigger: AGACATGTTCTGCCTTTTCCATGGGAAGAGATACTC...CACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp GGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCGAACTGATCTCACTGTaGCCAGGGTCTGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GLCYVLVTLSGLAVTFSSELISL*PGSALS
Trigger: GGACAAAGCAGACCCTGGCCACAGTGAGATCAGTTC...GGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp CAGCTTCCAGAGGTAGATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAAAAAGAGATGTCATCTaGGCCACTCAGGCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: QLPEVDLHQVRGLVFQGKKRDVI*ATQAKE
Trigger: CTCTTTTGCCTGAGTGGCCCAGATGACATCTCTTTT...TTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATCTACCTCTGGAAGCTG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR TCA 90 bp ACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGAGTGTGAGGTTCTCTaGGCAGGTACAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TQAFLCFSFRTILTVVLPECEVL*AGTAQA
Trigger: TGCCTGCGCTGTACCTGCTCAGAGAACCTCACACTC...AGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000528471.1
CDS-3UTR CCA 90 bp ATACAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCCTGGCAGCAGGAGTCTaGCAGCGGGAGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: IQLISATVRSLLCLGHFVLAAGV*QREGCW
Trigger: CCAGCACCCCTCCCGCTGCCAGACTCCTGCTGCCAG...GACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp TGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCGTCTGCTTTGTCCTCTaGGCAAATCTTGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: CYVLVTLSGLAVTFSSRVVCFVL*ANLAAL
Trigger: AAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGAC...GACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp TTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTTCAGCTCCAGGGTCTaGGCTAGGAAGACGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LGLCYVLVTLSGLAVTFSFSSRV*ARKTFQ
Trigger: CTGGAACGTCTTCCTAGCCCAGACCCTGGAGCTGAA...GCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp TCTCACTGTGGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCAAAAGAGATGTCATCTaGGCCACTCAGGCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: SHCGQGLLCPLGKSCSTSKRDVI*ATQAKE
Trigger: CTCTTTTGCCTGAGTGGCCCAGATGACATCTCTTTT...GGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
3UTR CAA 72 bp CTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTaGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LQLLGLCYVLVT*SGLAVTFSSRV
Trigger: GACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR TCA 90 bp TCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTCCTTCAGGACGATCTTaGCAGTTGTGCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SATVRSLLCLGHFVWTGRPSGRS*QLCCLL
Trigger: GAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGG...ACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR GCA 90 bp GGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCTACGTCTTCCCGCCATaGACACAGGCTTTCTTATGT +
Preference number: 4 (lower is better)
Translates to: GLCYVLVTLSGLAVTFSSYVFPP*TQAFLC
Trigger: ACATAAGAAAGCCTGTGTGCATGGCGGGAAGACGTA...GGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR GCA 90 bp TTTCTTATGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGCGAGCAGTCGGAAGTaGTGTGCCTCTTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FLMFLLQDDLDSCAACSLASSRK*CASFWK
Trigger: CTTCCAGAAAGAGGCACAGCACTTCCGACTGCTCGC...AAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp TACAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGGGATACCGATGTGTaGACGAGGACCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: YSSYLQLLGLCYVLVTLSGDTDV*TRTRPG
Trigger: ACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCC...AGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
3UTR CAA 72 bp ACACAGGCTTTCTTATGTTTCTCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TQAFLCFSFRTI*TVVLPAPLGLK
Trigger: CTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAAGCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR GCA 90 bp ACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCCTCTGGGCAAATCTTaGAGCACTTCCCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: TVRSLLCLGHFVWTGRDLPLGKS*STSQPL
Trigger: AAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGG...AAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR GCA 90 bp TTTCTTATGTTTCTCCTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTCCTCTGGGCAAATCTTaGAGCACTTCCCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: FLMFLLQDDLDSCAACSLPLGKS*STSQPL
Trigger: AAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGG...AAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGAGAAACATAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CCA 90 bp ACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCTTGGTCACTTTGTCTaGACTGGCCGTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: TVRSLLCLGHFVWTGRDLLGHFV*TGRDLQ
Trigger: CTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAG...AAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp CAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGCCCTTGGGTCTGAAGTaGCGAGGGATGAAGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QLISATVRSLLCLGHFVWPLGLK*RGMKLR
Trigger: TCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGG...CCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp CAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGCTTGGTCACTTTGTCTaGACTGGCCGTGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: QLISATVRSLLCLGHFVWLGHFV*TGRDLQ
Trigger: CTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAG...CCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
3UTR CAA 72 bp AGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTaGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SSYLQLLGLCYV*VTLSGLAVTFS
Trigger: GCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR GCA 90 bp TACAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTACCCCATGGAGCGACTaGACACTGTCCTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: YSSYLQLLGLCYVLVTLSTPWSD*TLSSSS
Trigger: GGATGAAGAGGACAGTGTGCAGTCGCTCCATGGGGT...AGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp TCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGAGTATCTCTTCCCATaGAAAAGGCAGAACATGTCT +
Preference number: 4 (lower is better)
Translates to: SATVRSLLCLGHFVWTGREYLFP*KRQNMS
Trigger: AGACATGTTCTGCCTTTTCCATGGGAAGAGATACTC...ACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CCA 90 bp TCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGTCTTTGTTATGTCTTaGTCACTTTGTCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: SATVRSLLCLGHFVWTGRVFVMS*SLCLDW
Trigger: CCAGTCCAGACAAAGTGACCAAGACATAACAAAGAC...ACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CCA 90 bp TACAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTAATCTGCTAGACAACTaGGCATGCTCTCCTAGGCAA +
Preference number: 4 (lower is better)
Translates to: YSSYLQLLGLCYVLVTLSNLLDN*ACSPRQ
Trigger: TTGCCTAGGAGAGCATGCCCAGTTGTCTAGCAGATT...AGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS CCA 90 bp GGCCTGGCAGCAGGAGTCTGGCAGCGGGAGGGGTGCTGGGCAGCCTaGTTCGGGGCAGGTTGTGAGGCCGCAGTAGATCTGGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GLAAGVWQREGCWAA*FGAGCEAAVDLALC
Trigger: ACAGAGGGCCAGATCTACTGCGGCCTCACAACCTGCCCCGAACCAGGCTGCCCAGCACCCCTCCCGCTGCCAGACTCCTGCTGCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000622063.4
CDS-3UTR CAA 90 bp CAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACGTCAGAGGACACACTGGTaGGGCAGGCGGGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: QGAEGTEGRVPHLPVGVRQRTHW*GRREGN
Trigger: GTTCCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTG...ACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp AAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACGTCGTGCTGCCTGCTCCCTaGGGTCTGAAGTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: KGPKARKAGCHTSPWEYVVLPAP*GLKWRG
Trigger: CCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCAC...GACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 90 bp AGCTTTGCAGGCCTGGCAGCAGGAGTCTGGCAGCGGGAGGGGTGCTaGGCAGCCTGGTTCGGGGCAGGTTGTGAGGCCGCAGTAGATCTG +
Preference number: 5 (lower is better)
Translates to: SFAGLAAGVWQREGC*AAWFGAGCEAAVDL
Trigger: CAGATCTACTGCGGCCTCACAACCTGCCCCGAACCAGGCTGCCCAGCACCCCTCCCGCTGCCAGACTCCTGCTGCCAGGCCTGCAAAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622063.4
CDS-3UTR CAA 90 bp CGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCACCCGGCCCGGTGCCTaGGGACACCTGGTAGAACTG +
Preference number: 5 (lower is better)
Translates to: RRRLSGLGDTDVWTRTRPTRPGA*GHLVEL
Trigger: CAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGT...GGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp GGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTAGCAGGTTGTCTGGGCTaGGGGATACCGATGTGTGGA +
Preference number: 5 (lower is better)
Translates to: GQGAEGTEGRVPHLPVGVAGCLG*GIPMCG
Trigger: TCCACACATCGGTATCCCCAAGCCCAGACAACCTGC...TACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp CGGGGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGCAAAGCGACGCAGGTaGTCTGGGCTTGGGGATACC +
Preference number: 5 (lower is better)
Translates to: RGDGRGTRWDRSHAGSPGAKRRR*SGLGDT
Trigger: GGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGC...GCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 90 bp AGGACCCTCACCTCGGGAACCATCCTTTCCCCAGGGTCAGGCCGCTaGTCCGGGAGCGGAGTCGGGAGGAAGGGAGACGAAAAGGACACG +
Preference number: 5 (lower is better)
Translates to: RTLTSGTILSPGSGR*SGSGVGRKGDEKDT
Trigger: CGTGTCCTTTTCGTCTCCCTTCCTCCCGACTCCGCTCCCGGACCAGCGGCCTGACCCTGGGGAAAGGATGGTTCCCGAGGTGAGGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263671.9
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000622063.4
CDS CCA 90 bp ATCTTTGCAGGCCTGGCAGCAGGAGTCTGGCAGCGGGAGGGGTGCTaGGCAGCCTGGTTCGGGGCAGGTTGTGAGGCCGCAGTAGATCTG +
Preference number: 5 (lower is better)
Translates to: IFAGLAAGVWQREGC*AAWFGAGCEAAVDL
Trigger: CAGATCTACTGCGGCCTCACAACCTGCCCCGAACCAGGCTGCCCAGCACCCCTCCCGCTGCCAGACTCCTGCTGCCAGGCCTGCAAAGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
CDS-3UTR CAA 90 bp AGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCACCCGGCCCGGTGCCTaGGGACACCTGGTAGAACTG +
Preference number: 5 (lower is better)
Translates to: SDAGCLGLGIPMCGRGPGTRPGA*GHLVEL
Trigger: CAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGT...GCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp AGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACGTCTTCCCGCCATGCAAAGCGACGCAGGTaGTCTGGGCTTGGGGATACC +
Preference number: 5 (lower is better)
Translates to: RHGRPGATPPRGSTSSRHAKRRR*SGLGDT
Trigger: GGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGC...ATGGCGGGAAGACGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp ATAGGATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCGCAGTACATCAGGCCTaGTGGCTCCAAGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: IGCRARGRRHGRPGATPPAVHQA*WLQVGV
Trigger: CACCCCTACTTGGAGCCACAAGGCCTGATGTACTGC...GGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp AGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCACAGAGGACACACTGGTaGGGCAGGCGGGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: RTRPGALGHLVELISLWPQRTHW*GRREGN
Trigger: GTTCCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTG...TGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp TGGACGAGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGGTGCTGCCTGCTCCCTaGGGTCTGAAGTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: WTRTRPGALGHLVELISLVLPAP*GLKWRG
Trigger: CCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCAC...CAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp GCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGTGGGAGTACGTCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ARGRRHGRPGATPPRGSTSFRTI*TVVLPA
Trigger: AGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGA...CGTACTCCCACGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp TGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGGGCACCCGGCCCGGTGCCTaGGGACACCTGGTAGAACTG +
Preference number: 5 (lower is better)
Translates to: CAACSLGSEVARDEAQRGTRPGA*GHLVEL
Trigger: CAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGT...GCCCCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp GCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCGCAGTACATCAGGCCTaGTGGCTCCAAGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: ATQVVWAWGYRCVDEDPAAVHQA*WLQVGV
Trigger: CACCCCTACTTGGAGCCACAAGGCCTGATGTACTGC...GGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp GGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCTCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GDGRGTRWDRSHAGSPGGSFRTI*TVVLPA
Trigger: AGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGA...GCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 90 bp AGGCGGGAGGGGAACAGCTCATGGGCACTGAAGATCTCTCCGTGTTaGTACATGGTCCCGTTGTGCTGGCAGGACTTTGGTGGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: RREGNSSWALKISPC*YMVPLCWQDFGGAR
Trigger: CCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAGATCTTCAGTGCCCATGAGCTGTTCCCCTCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528471.1
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS-3UTR CAA 90 bp AGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTGGCCAGCAAAGCGACGCAGGTaGTCTGGGCTTGGGGATACC +
Preference number: 5 (lower is better)
Translates to: RTRPGALGHLVELISLWPAKRRR*SGLGDT
Trigger: GGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGC...TGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp CGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCGGTTGCTCACTTGCCTCATaGTGCAGCTGCAGAGGACAC +
Preference number: 5 (lower is better)
Translates to: RRLSGLGDTDVWTRTRPGCSLAS*CSCRGH
Trigger: GTGTCCTCTGCAGCTGCACAATGAGGCAAGTGAGCA...ACCGGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp TCTCGGGGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTTGCTCACTTGCCTCATaGTGCAGCTGCAGAGGACAC +
Preference number: 5 (lower is better)
Translates to: SRGDGRGTRWDRSHAGSPCSLAS*CSCRGH
Trigger: GTGTCCTCTGCAGCTGCACAATGAGGCAAGTGAGCA...AGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACCCCGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS TCA 90 bp GGACACACTGGTTGGGCAGGCGGGAGGGGAACAGCTCATGGGCACTaGAGATCTCTCCGTGTTGGTACATGGTCCCGTTGTGCTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GHTGWAGGRGTAHGH*RSLRVGTWSRCAGR
Trigger: CCTGCCAGCACAACGGGACCATGTACCAACACGGAGAGATCTTCAGTGCCCATGAGCTGTTCCCCTCCCGCCTGCCCAACCAGTGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528471.1
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS TCA 90 bp GGAAGGTCCAGCAGAAGGGAGAGGCGATCAAAGAAAGGGGGAAGGTaGGAGGGAGAGGAGGAGAAAGCAGGGAGAGGACCGGCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GRSSRRERRSKKGGR*EGEEEKAGRGPASA
Trigger: GGCAGACGCCGGTCCTCTCCCTGCTTTCTCCTCCTCTCCCTCTCACCTTCCCCCTTTCTTTGATCGCCTCTCCCTTCTGCTGGACCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376332.8
ENST00000622063.4
CDS CCA 90 bp CTCTCCGTGTTGGTACATGGTCCCGTTGTGCTGGCAGGACTTTGGTaGGGCCCGGAGTCCAGAGGGAGTGTGAGGTTCCACACACTTGGG +
Preference number: 5 (lower is better)
Translates to: LSVLVHGPVVLAGLW*GPESRGSVRFHTLG
Trigger: CCCAAGTGTGTGGAACCTCACACTCCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263671.9
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS-3UTR CAA 90 bp TGGACGAGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGACACTTGGGACAGCATaGCTGTGGCTCCGTCACAGG +
Preference number: 5 (lower is better)
Translates to: WTRTRPGALGHLVELISLTLGTA*LWLRHR
Trigger: CCTGTGACGGAGCCACAGCAATGCTGTCCCAAGTGT...CAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534276.5
CDS-3UTR CAA 90 bp GGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGAAGATCTCTCCGTGTaGGTACATGGTCCCGTTGTG +
Preference number: 5 (lower is better)
Translates to: GVLGGTGHTLAVLAAILTEDLSV*VHGPVV
Trigger: CACAACGGGACCATGTACCAACACGGAGAGATCTTC...TGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp AGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAGGATGCAGGGCAGGTTGTCTGGGCTaGGGGATACCGATGTGTGGA +
Preference number: 5 (lower is better)
Translates to: RSHAGSPGGHPHRCIGCRAGCLG*GIPMCG
Trigger: TCCACACATCGGTATCCCCAAGCCCAGACAACCTGC...CCTGCATCCTATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp AGGATGCAGGGCAAGGGGCCGAAGGCACGGAAGGCCGGGTGCCACACCTCCCCGGGTCTTTGTTATGTCTaGGTCACTTTGTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: RMQGKGPKARKAGCHTSPGLCYV*VTLSGL
Trigger: CAGTCCAGACAAAGTGACCAAGACATAACAAAGACC...CGGGGAGGTGTGGCACCCGGCCTTCCGTGCCTTCGGCCCCTTGCCCTGCATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CAA 90 bp GGTGACGGCAGGGGTACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCCAGAAGGTCTGAGTTaGAATCTCGGCTTTACCACA +
Preference number: 5 (lower is better)
Translates to: GDGRGTRWDRSHAGSPGGPEGLS*NLGFTT
Trigger: TGTGGTAAAGCCGAGATTCAAACTCAGACCTTCTGG...GCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGTACCCCTGCCGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp ACTCGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCCATCCGATTGCTCACTaGCCTCATTGTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: TRWDRSHAGSPGGHPHRCHPIAH*PHCAAA
Trigger: TGCAGCTGCACAATGAGGCAAGTGAGCAATCGGATG...GCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS CCA 90 bp CTCTCCGTGTTGGTACATGGTCCCGTTGTGCTGGCAGGACTTTGGTaGGGCCCGGAGTCCAGAGGGAGTGTGAGGTTCTCTGAGCAGGTA +
Preference number: 5 (lower is better)
Translates to: LSVLVHGPVVLAGLW*GPESRGSVRFSEQV
Trigger: TACCTGCTCAGAGAACCTCACACTCCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000528471.1
CDS CCA 90 bp GATCTCTCCGTGTTGGTACATGGTCCCGTTGTGCTGGCAGGACTTTaGTGGGGCCCGGAGTCCAGAGGGAGTGTGAGGTTCTCTGAGCAG +
Preference number: 5 (lower is better)
Translates to: DLSVLVHGPVVLAGL*WGPESRGSVRFSEQ
Trigger: CTGCTCAGAGAACCTCACACTCCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000528471.1
CDS CCA 90 bp GCAGACGGAATCCCCACCAGCCCCTGCTTGCACGCTTCTCGTAAGTaGAGCTTGCTCCCTCCCTTCCACTGGCAGAAGCCTCTAAGTGTG +
Preference number: 5 (lower is better)
Translates to: ADGIPTSPCLHASRK*SLLPPFHWQKPLSV
Trigger: CACACTTAGAGGCTTCTGCCAGTGGAAGGGAGGGAGCAAGCTCCACTTACGAGAAGCGTGCAAGCAGGGGCTGGTGGGGATTCCGTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS-3UTR CAA 90 bp CTGATCTCACTGTGGCCAGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACCAGAGGACACACTGGTaGGGCAGGCGGGAGGGGAAC +
Preference number: 5 (lower is better)
Translates to: LISLWPGSALSSGQILQHQRTHW*GRREGN
Trigger: GTTCCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTG...GTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCTGGCCACAGTGAGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp GCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGGGCGCTGAGCATCCGATTGCTCACTaGCCTCATCTTTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: ACSLGSEVARDEAQRGAEHPIAH*PHLCRP
Trigger: AGGCCTGCAAAGATGAGGCAAGTGAGCAATCGGATG...CTCAGCGCCCCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CAA 90 bp CACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTCCTCTGGGCAAATCTaGCAGCACTTCCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: HQVRGLVFQGKATQVVWASSGQI*QHFPAT
Trigger: AGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGA...AGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp GCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCAGAGGGGCGCTGAGTATGTCTTGGTCACTTaGTCTGGACTGGCCGTGACC +
Preference number: 5 (lower is better)
Translates to: ACSLGSEVARDEAQRGAEYVLVT*SGLAVT
Trigger: GGTCACGGCCAGTCCAGACAAAGTGACCAAGACATA...CTCAGCGCCCCTCTGAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CAA 90 bp CGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGACCCGGCCCGTCCTCTTCATCCGATaGCTCACTTGCCTCATTGTG +
Preference number: 5 (lower is better)
Translates to: RRRLSGLGDTDVWTRTRPVLFIR*LTCLIV
Trigger: CACAATGAGGCAAGTGAGCAATCGGATGAAGAGGAC...GGGCCGGGTCCTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS GCA 90 bp AGCCCCTGCTTGTTGTTTGACTCTTGCGGTCACTCAGAACACAGCTaGTCCCTCTGCCTGGGACAGCCCTTCAGAGCCACGAAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: SPCLLFDSCGHSEHS*SLCLGQPFRATKPA
Trigger: TGCTGGCTTCGTGGCTCTGAAGGGCTGTCCCAGGCAGAGGGAGCAGCTGTGTTCTGAGTGACCGCAAGAGTCAAACAACAAGCAGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CCA 90 bp GATCTCTCCGTGTTGGTACATGGTCCCGTTGTGCTGGCAGGACTTTaGTGGGGCCCGGAGTCCAGAGGGAGTGTGAGGTTCCACACACTT +
Preference number: 5 (lower is better)
Translates to: DLSVLVHGPVVLAGL*WGPESRGSVRFHTL
Trigger: AAGTGTGTGGAACCTCACACTCCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263671.9
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS CCA 90 bp GGGGGAGTATCTCTTCCCATGGAAAAGGCAGAACATGTCTGGGCCTaGCAAACCGACCAGTGCCATGTTAGTCCCAGGAGGCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: GGVSLPMEKAEHVWA*QTDQCHVSPRRLQP
Trigger: GGGCTGGAGCCTCCTGGGACTAACATGGCACTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTTTTCCATGGGAAGAGATACTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 90 bp CTCGCCGGGGGAGTATCTCTTCCCATGGAAAAGGCAGAACATGTCTaGGCCTGGCAAACCGACCAGTGCCATGTTAGTCCCAGGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LAGGVSLPMEKAEHV*AWQTDQCHVSPRRL
Trigger: GAGCCTCCTGGGACTAACATGGCACTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTTTTCCATGGGAAGAGATACTCCCCCGGCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 90 bp CAGTGGGGGCTGGGGTGCCCGGGCCTCTCTTTCTCCCAGCATCACTaGAACATGGATCCTGAGGATGTCTCTGCAAATGGCAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: QWGLGCPGLSFSQHH*NMDPEDVSANGRKD
Trigger: ATCCTTCCTGCCATTTGCAGAGACATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAAAGAGAGGCCCGGGCACCCCAGCCCCCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622063.4
CDS-3UTR CAA 90 bp GATCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGTACATGGTCCCGTaGTGCTGGCAGGACTTTGGT +
Preference number: 5 (lower is better)
Translates to: DLHQVRGLVFQGKATQVVWYMVP*CWQDFG
Trigger: ACCAAAGTCCTGCCAGCACAACGGGACCATGTACCA...GACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp AGGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCGTGCTGCCTGCTCCCTaGGGTCTGAAGTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: RVCFVLWANLAALPSHFLVLPAP*GLKWRG
Trigger: CCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCAC...GAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp CACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTCATCCGATTGCTCACTaGCCTCATTGTGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: HQVRGLVFQGKATQVVWAHPIAH*PHCAAA
Trigger: TGCAGCTGCACAATGAGGCAAGTGAGCAATCGGATG...AGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp CGGTGGGACAGGTCACACGCTGGCAGTCCTGGCGGCCATCCTCACAGGTGCATAGTCCTCTTCATCCGATaGCTCACTTGCCTCATTGTG +
Preference number: 5 (lower is better)
Translates to: RWDRSHAGSPGGHPHRCIVLFIR*LTCLIV
Trigger: CACAATGAGGCAAGTGAGCAATCGGATGAAGAGGAC...TATGCACCTGTGAGGATGGCCGCCAGGACTGCCAGCGTGTGACCTGTCCCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS GCA 90 bp CCCATGGAAAAGGCAGAACATGTCTGGGCCTGGCAAACCGACCAGTaGCATGTTAGTCCCAGGAGGCTCCAGCCCAAAGACCCTGTCTCA +
Preference number: 5 (lower is better)
Translates to: PMEKAEHVWAWQTDQ*HVSPRRLQPKDPVS
Trigger: TGAGACAGGGTCTTTGGGCTGGAGCCTCCTGGGACTAACATGGCACTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTTTTCCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS GCA 90 bp TTGTTGTTTGACTCTTGCGGTCACTCAGAACACAGCTGCTCCCTCTaGCTGGGACAGCCCTTCAGAGCCACGAAGCCAGCAGTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LLFDSCGHSEHSCSL*LGQPFRATKPAVLS
Trigger: GGACAGGACTGCTGGCTTCGTGGCTCTGAAGGGCTGTCCCAGGCAGAGGGAGCAGCTGTGTTCTGAGTGACCGCAAGAGTCAAACAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CCA 90 bp ATCCGATTGCTCACTTGCCTCATTGTGCAGCTGCAGAGGACACACTaGTTGGGCAGGCGGGAGGGGAACAGCTCATGGGCACTGAAGATC +
Preference number: 5 (lower is better)
Translates to: IRLLTCLIVQLQRTH*LGRREGNSSWALKI
Trigger: GATCTTCAGTGCCCATGAGCTGTTCCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTGCAGCTGCACAATGAGGCAAGTGAGCAATCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp CTTCAGGACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGGCAGTACATCAGGCCTaGTGGCTCCAAGTAGGGGTG +
Preference number: 5 (lower is better)
Translates to: LQDDLDSCAACSLGSEVAAVHQA*WLQVGV
Trigger: CACCCCTACTTGGAGCCACAAGGCCTGATGTACTGC...CGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGTCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp CAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGACGAGGAAGATCTCTCCGTGTaGGTACATGGTCCCGTTGTG +
Preference number: 5 (lower is better)
Translates to: QGKATQVVWAWGYRCVDEEDLSV*VHGPVV
Trigger: CACAACGGGACCATGTACCAACACGGAGAGATCTTC...CTCGTCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp TTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGAAGCTCTCACTTGCCTCATCTTaGCAGGCCTGGCAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: LTVVLPAPLGLKWRGMKLSLASS*QAWQQE
Trigger: CTCCTGCTGCCAGGCCTGCAAAGATGAGGCAAGTGA...GAGCTTCATCCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CAA 90 bp GTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTTGGGGATACCGATGTGTGGATCCTCTGGGCAAATCTaGCAGCACTTCCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: VPGQSDAGCLGLGIPMCGSSGQI*QHFPAT
Trigger: AGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGA...TCCACACATCGGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGCCCTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp GGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCACCCGGCCCGGTGCCTaGGGACACCTGGTAGAACTG +
Preference number: 5 (lower is better)
Translates to: GLCYVLVTLSGLAVTFSSTRPGA*GHLVEL
Trigger: CAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGT...GGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS CCA 90 bp GGCTGGGGTGCCCGGGCCTCTCTTTCTCCCAGCATCACTGGAACATaGATCCTGAGGATGTCTCTGCAAATGGCAGGAAGGATGAAAGTC +
Preference number: 5 (lower is better)
Translates to: GWGARASLSPSITGT*ILRMSLQMAGRMKV
Trigger: GACTTTCATCCTTCCTGCCATTTGCAGAGACATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAAAGAGAGGCCCGGGCACCCCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622063.4
CDS-3UTR CAA 90 bp TGTCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCGGGGTGACGGCGAAGATCTCTCCGTGTaGGTACATGGTCCCGTTGTG +
Preference number: 5 (lower is better)
Translates to: CPLGKSCSTSQPLSRGDGEDLSV*VHGPVV
Trigger: CACAACGGGACCATGTACCAACACGGAGAGATCTTC...GCCGTCACCCCGAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp CACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGGGCTGTCCTCTTCATCCGATaGCTCACTTGCCTCATCTTT +
Preference number: 5 (lower is better)
Translates to: HQVRGLVFQGKATQVVWAVLFIR*LTCLIF
Trigger: AAAGATGAGGCAAGTGAGCAATCGGATGAAGAGGAC...AGCCCAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CAA 90 bp AGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCGTGCTGCCTGCTCCCTaGGGTCTGAAGTGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: RSLLCLGHFVWTGRDLQLVLPAP*GLKWRG
Trigger: CCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCAC...GAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CAA 90 bp ACGATCTTGACAGTTGTGCTGCCTGCTCCCTTGGGTCTGAAGTGGCGAGGGATGTCCTCTGGGCAAATCTaGCAGCACTTCCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: TILTVVLPAPLGLKWRGMSSGQI*QHFPAT
Trigger: AGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGA...CATCCCTCGCCACTTCAGACCCAAGGGAGCAGGCAGCACAACTGTCAAGATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp TGGACGAGGACCCGGCCCGGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGCCAGAAGGTCTGAGTTaGAATCTCGGCTTTACCACA +
Preference number: 5 (lower is better)
Translates to: WTRTRPGALGHLVELISLPEGLS*NLGFTT
Trigger: TGTGGTAAAGCCGAGATTCAAACTCAGACCTTCTGG...CAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACCGGGCCGGGTCCTCGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS TCA 90 bp ACACAGCAAGTCAGTCACCAGGCAGCGATGACAGCACCAGTCTCCTaGCTCAGTCCCACGCTCCTCTGCCCTCACAATCATGCTTGTTTC +
Preference number: 5 (lower is better)
Translates to: TQQVSHQAAMTAPVS*LSPTLLCPHNHACF
Trigger: GAAACAAGCATGATTGTGAGGGCAGAGGAGCGTGGGACTGAGTCAGGAGACTGGTGCTGTCATCGCTGCCTGGTGACTGACTTGCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp GATCCTGAGGATGTCTCACCCCATGGAGCGACTGCACACTGTCCTCTTCATCCGTCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: DPEDVSPHGATAHCPLHPSFRTI*TVVLPA
Trigger: AGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGA...CGGATGAAGAGGACAGTGTGCAGTCGCTCCATGGGGTGAGACATCCTCAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528471.1
CDS-3UTR CAA 90 bp TCTCCACCAAGTCCGAGGCCTCGTGTTCCAGGGCAAAGCGACGCAGGTTGTCTGCCAGAAGGTCTGAGTTaGAATCTCGGCTTTACCACA +
Preference number: 5 (lower is better)
Translates to: SPPSPRPRVPGQSDAGCLPEGLS*NLGFTT
Trigger: TGTGGTAAAGCCGAGATTCAAACTCAGACCTTCTGG...CAGACAACCTGCGTCGCTTTGCCCTGGAACACGAGGCCTCGGACTTGGTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp TGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCTCCTCTGGGCAAATCTaGCAGCACTTCCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: CYVLVTLSGLAVTFSSRVSSGQI*QHFPAT
Trigger: AGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGA...GACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS GCA 90 bp ATCTGGGCCACTCAGGCAAAAGAGAATCTGCTAGACAACTGGGCATaGTCTCCTAGGCAAGGGGCCAGAAGGTCTGAGTTTGAATCTCGG +
Preference number: 5 (lower is better)
Translates to: IWATQAKENLLDNWA*SPRQGARRSEFESR
Trigger: CCGAGATTCAAACTCAGACCTTCTGGCCCCTTGCCTAGGAGAGCATGCCCAGTTGTCTAGCAGATTCTCTTTTGCCTGAGTGGCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp AGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTCGCAGGTTGTCTGGGCTaGGGGATACCGATGTGTGGA +
Preference number: 5 (lower is better)
Translates to: RSLLCLGHFVWTGRDLQLAGCLG*GIPMCG
Trigger: TCCACACATCGGTATCCCCAAGCCCAGACAACCTGC...GAGCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CAA 90 bp TTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCGCAAAGCGACGCAGGTaGTCTGGGCTTGGGGATACC +
Preference number: 5 (lower is better)
Translates to: LGLCYVLVTLSGLAVTFSAKRRR*SGLGDT
Trigger: GGTATCCCCAAGCCCAGACAACCTGCGTCGCTTTGC...GCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS CCA 90 bp GATGTCATCTGGGCCACTCAGGCAAAAGAGAATCTGCTAGACAACTaGGCATGCTCTCCTAGGCAAGGGGCCAGAAGGTCTGAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: DVIWATQAKENLLDN*ACSPRQGARRSEFE
Trigger: TTCAAACTCAGACCTTCTGGCCCCTTGCCTAGGAGAGCATGCCCAGTTGTCTAGCAGATTCTCTTTTGCCTGAGTGGCCCAGATGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 90 bp TGCTTGCACGCTTCTCGTAAGTGGAGCTTGCTCCCTCCCTTCCACTaGCAGAAGCCTCTAAGTGTGACAAAGTTCTTCTTCTCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: CLHASRKWSLLPPFH*QKPLSVTKFFFSWS
Trigger: GCTCCAAGAGAAGAAGAACTTTGTCACACTTAGAGGCTTCTGCCAGTGGAAGGGAGGGAGCAAGCTCCACTTACGAGAAGCGTGCAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS TCA 90 bp TGCTGTGCCTCTTTCTGGAAGTCTTGCTTCCTGACTTTCTTGATCTaGGTCAAGTGGAAGATTCTGGCTGTGTGGCCTTGGGCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: CCASFWKSCFLTFLI*VKWKILAVWPWARY
Trigger: GTACCTGGCCCAAGGCCACACAGCCAGAATCTTCCACTTGACTCAGATCAAGAAAGTCAGGAAGCAAGACTTCCAGAAAGAGGCACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263671.9
CDS TCA 90 bp TGCTGTGCCTCTTTCTGGAAGTCTTGCTTCCTGACTTTCTTGATCTaGGTCAAGTGGAAGATTCCCTGTCATTCCCCTTCCCTGACGTCC +
Preference number: 5 (lower is better)
Translates to: CCASFWKSCFLTFLI*VKWKIPCHSPSLTS
Trigger: GGACGTCAGGGAAGGGGAATGACAGGGAATCTTCCACTTGACTCAGATCAAGAAAGTCAGGAAGCAAGACTTCCAGAAAGAGGCACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529912.5
CDS-3UTR CAA 90 bp GCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACTCCTTCAGGACGATCTaGACAGTTGTGCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: ATVRSLLCLGHFVWTGRDSFRTI*TVVLPA
Trigger: AGCAGGCAGCACAACTGTCAAGATCGTCCTGAAGGA...GTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS-3UTR CAA 90 bp GGGTCTGCTTTGTCCTCTGGGCAAATCTTGCAGCACTTCCCAGCCACTTTCTCGCTCTTTCTGGAAGTCTaGCTTCCTGACTTTCTTGAT +
Preference number: 5 (lower is better)
Translates to: GSALSSGQILQHFPATFSLFLEV*LPDFLD
Trigger: ATCAAGAAAGTCAGGAAGCAAGACTTCCAGAAAGAG...CGAGAAAGTGGCTGGGAAGTGCTGCAAGATTTGCCCAGAGGACAAAGCAGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376324.7
CDS-3UTR CAA 90 bp TTAGGTCTTTGTTATGTCTTGGTCACTTTGTCTGGACTGGCCGTGACCTTCAGCTATGTCTTGGTCACTTaGTCTGGACTGGCCGTGACC +
Preference number: 5 (lower is better)
Translates to: LGLCYVLVTLSGLAVTFSYVLVT*SGLAVT
Trigger: GGTCACGGCCAGTCCAGACAAAGTGACCAAGACATA...GCTGAAGGTCACGGCCAGTCCAGACAAAGTGACCAAGACATAACAAAGACCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS CCA 90 bp CCTGTCTCATTTCTCCTTCTTTCTAGCTCTAAAAGAGATGTCATCTaGGCCACTCAGGCAAAAGAGAATCTGCTAGACAACTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: PVSFLLLSSSKRDVI*ATQAKENLLDNWAC
Trigger: GCATGCCCAGTTGTCTAGCAGATTCTCTTTTGCCTGAGTGGCCCAGATGACATCTCTTTTAGAGCTAGAAAGAAGGAGAAATGAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS-3UTR CAA 90 bp ATACAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCGCAGGTTGTCTGGGCTaGGGGATACCGATGTGTGGA +
Preference number: 5 (lower is better)
Translates to: IQLISATVRSLLCLGHFVAGCLG*GIPMCG
Trigger: TCCACACATCGGTATCCCCAAGCCCAGACAACCTGC...GACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS TCA 90 bp CTTCTCTTGGAGCTGAAAGCTGCCTCTCTGCATTTCTCACCAACCTaGTATGGTGGAATGAGAAGACTGATATTTTTAGTGCCTCGTGTA +
Preference number: 5 (lower is better)
Translates to: LLLELKAASLHFSPT*YGGMRRLIFLVPRV
Trigger: TACACGAGGCACTAAAAATATCAGTCTTCTCATTCCACCATATCAGGTTGGTGAGAAATGCAGAGAGGCAGCTTTCAGCTCCAAGAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CCA 90 bp CTTGGAGCTGAAAGCTGCCTCTCTGCATTTCTCACCAACCTGATATaGTGGAATGAGAAGACTGATATTTTTAGTGCCTCGTGTATGTCA +
Preference number: 5 (lower is better)
Translates to: LGAESCLSAFLTNLI*WNEKTDIFSASCMS
Trigger: TGACATACACGAGGCACTAAAAATATCAGTCTTCTCATTCCACCATATCAGGTTGGTGAGAAATGCAGAGAGGCAGCTTTCAGCTCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS-3UTR CAA 90 bp ATACAGCTCATATCTGCAACTGTTAGGTCTTTGTTATGTCTTGGTCACTTTGTCGGTCTTTGTTATGTCTaGGTCACTTTGTCTGGACTG +
Preference number: 5 (lower is better)
Translates to: IQLISATVRSLLCLGHFVGLCYV*VTLSGL
Trigger: CAGTCCAGACAAAGTGACCAAGACATAACAAAGACC...GACAAAGTGACCAAGACATAACAAAGACCTAACAGTTGCAGATATGAGCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000525413.5
CDS GCA 90 bp CTTAACGCTTATCTCACAGGGCAGTTAGGGAATCAAGCAGTGAAATaGTGTACAGATTTATATCATGGTATCAGCGTTAATTATTATGAT +
Preference number: 5 (lower is better)
Translates to: LNAYLTGQLGNQAVK*CTDLYHGISVNYYD
Trigger: ATCATAATAATTAACGCTGATACCATGATATAAATCTGTACAGCATTTCACTGCTTGATTCCCTAACTGCCCTGTGAGATAAGCGTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 72 bp GGCCTGGCAGCAGGAGTCTGGCAGCGGGAGGGGTGCTaGGCAGCCTGGTTCGGGGCAGGTTGTGAGGCCGCA +
Preference number: 6 (lower is better)
Translates to: GLAAGVWQREGC*AAWFGAGCEAA
Trigger: TGCGGCCTCACAACCTGCCCCGAACCAGGCTGCCCAGCACCCCTCCCGCTGCCAGACTCCTGCTGCCAGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000622063.4
CDS CCA 72 bp ACCTCGGGAACCATCCTTTCCCCAGGGTCAGGCCGCTaGTCCGGGAGCGGAGTCGGGAGGAAGGGAGACGAA +
Preference number: 6 (lower is better)
Translates to: TSGTILSPGSGR*SGSGVGRKGDE
Trigger: TTCGTCTCCCTTCCTCCCGACTCCGCTCCCGGACCAGCGGCCTGACCCTGGGGAAAGGATGGTTCCCGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263671.9
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000622063.4
CDS CCA 72 bp GGGTGCCAGCTCTCGCCGGGGGAGTATCTCTTCCCATaGAAAAGGCAGAACATGTCTGGGCGGGCTCGAGCG +
Preference number: 6 (lower is better)
Translates to: GCQLSPGEYLFP*KRQNMSGRARA
Trigger: CGCTCGAGCCCGCCCAGACATGTTCTGCCTTTTCCATGGGAAGAGATACTCCCCCGGCGAGAGCTGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263671.9
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000622063.4
CDS GCA 72 bp GACTCTTGCGGTCACTCAGAACACAGCTGCTCCCTCTaGCTGGGACAGCCCTTCAGAGCCACGAAGCCAGCA +
Preference number: 6 (lower is better)
Translates to: DSCGHSEHSCSL*LGQPFRATKPA
Trigger: TGCTGGCTTCGTGGCTCTGAAGGGCTGTCCCAGGCAGAGGGAGCAGCTGTGTTCTGAGTGACCGCAAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CCA 72 bp TTGGTACATGGTCCCGTTGTGCTGGCAGGACTTTGGTaGGGCCCGGAGTCCAGAGGGAGTGTGAGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: LVHGPVVLAGLW*GPESRGSVRFH
Trigger: GTGGAACCTCACACTCCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263671.9
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS CCA 72 bp GGGTGCCAGCTCTCGCCGGGGGAGTATCTCTTCCCATaGAAAAGGCAGAACATGTCTGGGCCTGGCAAACCG +
Preference number: 6 (lower is better)
Translates to: GCQLSPGEYLFP*KRQNMSGPGKP
Trigger: CGGTTTGCCAGGCCCAGACATGTTCTGCCTTTTCCATGGGAAGAGATACTCCCCCGGCGAGAGCTGGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 72 bp CTCACTTGCCTCATTGTGCAGCTGCAGAGGACACACTaGTTGGGCAGGCGGGAGGGGAACAGCTCATGGGCA +
Preference number: 6 (lower is better)
Translates to: LTCLIVQLQRTH*LGRREGNSSWA
Trigger: TGCCCATGAGCTGTTCCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTGCAGCTGCACAATGAGGCAAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS CCA 72 bp ATCCCCACCAGCCCCTGCTTGCACGCTTCTCGTAAGTaGAGCTTGCTCCCTCCCTTCCACTGGCAGAAGCCT +
Preference number: 6 (lower is better)
Translates to: IPTSPCLHASRK*SLLPPFHWQKP
Trigger: AGGCTTCTGCCAGTGGAAGGGAGGGAGCAAGCTCCACTTACGAGAAGCGTGCAAGCAGGGGCTGGTGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CAA 72 bp AGAGGGAGTGTGAGGTTCCACACACTTGGGACAGCATaGCTGTGGCTCCGTCACAGGCTGGGGGCAGTGGAC +
Preference number: 6 (lower is better)
Translates to: RGSVRFHTLGTA*LWLRHRLGAVD
Trigger: GTCCACTGCCCCCAGCCTGTGACGGAGCCACAGCAATGCTGTCCCAAGTGTGTGGAACCTCACACTCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000263671.9
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS TCA 72 bp GGTTGGGCAGGCGGGAGGGGAACAGCTCATGGGCACTaGAGATCTCTCCGTGTTGGTACATGGTCCCGTTGT +
Preference number: 6 (lower is better)
Translates to: GWAGGRGTAHGH*RSLRVGTWSRC
Trigger: ACAACGGGACCATGTACCAACACGGAGAGATCTTCAGTGCCCATGAGCTGTTCCCCTCCCGCCTGCCCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528471.1
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS GCA 72 bp CTGAAGATCTCTCCGTGTTGGTACATGGTCCCGTTGTaGTGGCAGGACTTTGGTGGGGCCCGGAGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: LKISPCWYMVPL*WQDFGGARSPE
Trigger: CTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAGATCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528471.1
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS CCA 72 bp AAGATCTCTCCGTGTTGGTACATGGTCCCGTTGTGCTaGCAGGACTTTGGTGGGGCCCGGAGTCCAGAGGGA +
Preference number: 6 (lower is better)
Translates to: KISPCWYMVPLC*QDFGGARSPEG
Trigger: TCCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAGATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528471.1
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS CCA 72 bp TTGGTACATGGTCCCGTTGTGCTGGCAGGACTTTGGTaGGGCCCGGAGTCCAGAGGGAGTGTGAGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: LVHGPVVLAGLW*GPESRGSVRFS
Trigger: AGAGAACCTCACACTCCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376324.7
ENST00000528471.1
CDS CAA 72 bp GCACTGAAGATCTCTCCGTGTTGGTACATGGTCCCGTaGTGCTGGCAGGACTTTGGTGGGGCCCGGAGTCCA +
Preference number: 6 (lower is better)
Translates to: ALKISPCWYMVP*CWQDFGGARSP
Trigger: TGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAGATCTTCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528471.1
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS CAA 90 bp AGATCTCTCCGTGTTGGTACATGGTCCCGTTGTGCTGGCAGGACTTaGGTGGGGCCCGGAGTCCAGAGGGAGTGTGAGGTTCCACACACT +
Preference number: 6 (lower is better)
Translates to: RSLRVGTWSRCAGRT*VGPGVQRECEVPHT
Trigger: AGTGTGTGGAACCTCACACTCCCTCTGGACTCCGGGCCCCACCAAAGTCCTGCCAGCACAACGGGACCATGTACCAACACGGAGAGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263671.9
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
ENST00000534276.5
ENST00000622063.4
CDS CAA 90 bp CGATTGCTCACTTGCCTCATTGTGCAGCTGCAGAGGACACACTGGTaGGGCAGGCGGGAGGGGAACAGCTCATGGGCACTGAAGATCTCT +
Preference number: 6 (lower is better)
Translates to: RLLTCLIVQLQRTHW*GRREGNSSWALKIS
Trigger: AGAGATCTTCAGTGCCCATGAGCTGTTCCCCTCCCGCCTGCCCAACCAGTGTGTCCTCTGCAGCTGCACAATGAGGCAAGTGAGCAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS CAA 90 bp GGAATCCCCACCAGCCCCTGCTTGCACGCTTCTCGTAAGTGGAGCTaGCTCCCTCCCTTCCACTGGCAGAAGCCTCTAAGTGTGACAAAG +
Preference number: 6 (lower is better)
Translates to: GIPTSPCLHASRKWS*LPPFHWQKPLSVTK
Trigger: CTTTGTCACACTTAGAGGCTTCTGCCAGTGGAAGGGAGGGAGCAAGCTCCACTTACGAGAAGCGTGCAAGCAGGGGCTGGTGGGGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS TCA 72 bp GTCAGTCACCAGGCAGCGATGACAGCACCAGTCTCCTaGCTCAGTCCCACGCTCCTCTGCCCTCACAATCAT +
Preference number: 6 (lower is better)
Translates to: VSHQAAMTAPVS*LSPTLLCPHNH
Trigger: ATGATTGTGAGGGCAGAGGAGCGTGGGACTGAGTCAGGAGACTGGTGCTGTCATCGCTGCCTGGTGACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS GCA 72 bp AAGGCAGAACATGTCTGGGCCTGGCAAACCGACCAGTaGCATGTTAGTCCCAGGAGGCTCCAGCCCAAAGAC +
Preference number: 6 (lower is better)
Translates to: KAEHVWAWQTDQ*HVSPRRLQPKD
Trigger: GTCTTTGGGCTGGAGCCTCCTGGGACTAACATGGCACTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CAA 72 bp ACCAGCCCCTGCTTGCACGCTTCTCGTAAGTGGAGCTaGCTCCCTCCCTTCCACTGGCAGAAGCCTCTAAGT +
Preference number: 6 (lower is better)
Translates to: TSPCLHASRKWS*LPPFHWQKPLS
Trigger: ACTTAGAGGCTTCTGCCAGTGGAAGGGAGGGAGCAAGCTCCACTTACGAGAAGCGTGCAAGCAGGGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS GCA 72 bp CCATGGAGCGACTGCACACTGTCCTCTTCATCCGATTaGTCACTTGCCTCATCTTTGCAGGCCTGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: PWSDCTLSSSSD*SLASSLQAWQQ
Trigger: CTGCTGCCAGGCCTGCAAAGATGAGGCAAGTGAGCAATCGGATGAAGAGGACAGTGTGCAGTCGCTCCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263671.9
ENST00000376324.7
ENST00000376332.8
ENST00000528789.1
ENST00000534159.5
CDS CCA 72 bp GCCCGGGCCTCTCTTTCTCCCAGCATCACTGGAACATaGATCCTGAGGATGTCTCTGCAAATGGCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: ARASLSPSITGT*ILRMSLQMAGR
Trigger: CCTTCCTGCCATTTGCAGAGACATCCTCAGGATCCATGTTCCAGTGATGCTGGGAGAAAGAGAGGCCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622063.4
CDS CCA 72 bp TTGTCTGGACTGGCCGTGACCTTCAGCTCCAGGGTCTaGGCTAGGAAGACGTCTTTTACCAGCTTCCAGAGG +
Preference number: 6 (lower is better)
Translates to: LSGLAVTFSSRV*ARKTSFTSFQR
Trigger: CCTCTGGAAGCTGGTAAAAGACGTCTTCCTAGCCCAGACCCTGGAGCTGAAGGTCACGGCCAGTCCAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622063.4
CDS GCA 72 bp CCATGGAGCGACTGCACACTGTCCTCTTCATCCGATTaGTCACTTGCCTCATTGTGCAGCTGCAGAGGACAC +
Preference number: 6 (lower is better)
Translates to: PWSDCTLSSSSD*SLASLCSCRGH
Trigger: GTGTCCTCTGCAGCTGCACAATGAGGCAAGTGAGCAATCGGATGAAGAGGACAGTGTGCAGTCGCTCCATGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS CCA 72 bp TGGGCCACTCAGGCAAAAGAGAATCTGCTAGACAACTaGGCATGCTCTCCTAGGCAAGGGGCCAGAAGGTCT +
Preference number: 6 (lower is better)
Translates to: WATQAKENLLDN*ACSPRQGARRS
Trigger: AGACCTTCTGGCCCCTTGCCTAGGAGAGCATGCCCAGTTGTCTAGCAGATTCTCTTTTGCCTGAGTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 72 bp TCTCTTCCCATGGAAAAGGCAGAACATGTCTGGGCCTaGCAAACCGACCAGTGCCATGTTAGTCCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SLPMEKAEHVWA*QTDQCHVSPRR
Trigger: CCTCCTGGGACTAACATGGCACTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTTTTCCATGGGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CAA 72 bp CCCATGGAGCGACTGCACACTGTCCTCTTCATCCGATaGCTCACTTGCCTCATTGTGCAGCTGCAGAGGACA +
Preference number: 6 (lower is better)
Translates to: PMERLHTVLFIR*LTCLIVQLQRT
Trigger: TGTCCTCTGCAGCTGCACAATGAGGCAAGTGAGCAATCGGATGAAGAGGACAGTGTGCAGTCGCTCCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528471.1
ENST00000534276.5
CDS CCA 72 bp GGAGTATCTCTTCCCATGGAAAAGGCAGAACATGTCTaGGCCTGGCAAACCGACCAGTGCCATGTTAGTCCC +
Preference number: 6 (lower is better)
Translates to: GVSLPMEKAEHV*AWQTDQCHVSP
Trigger: GGGACTAACATGGCACTGGTCGGTTTGCCAGGCCCAGACATGTTCTGCCTTTTCCATGGGAAGAGATACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CAA 90 bp GGGGCCAGCGAGCAGTCGGAAGTGCTGTGCCTCTTTCTGGAAGTCTaGCTTCCTGACTTTCTTGATCTGAGTCAAGTGGAAGATTCTGGC +
Preference number: 6 (lower is better)
Translates to: GASEQSEVLCLFLEV*LPDFLDLSQVEDSG
Trigger: GCCAGAATCTTCCACTTGACTCAGATCAAGAAAGTCAGGAAGCAAGACTTCCAGAAAGAGGCACAGCACTTCCGACTGCTCGCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263671.9
CDS CAA 90 bp GGGGCCAGCGAGCAGTCGGAAGTGCTGTGCCTCTTTCTGGAAGTCTaGCTTCCTGACTTTCTTGATCTGAGTCAAGTGGAAGATTCCCTG +
Preference number: 6 (lower is better)
Translates to: GASEQSEVLCLFLEV*LPDFLDLSQVEDSL
Trigger: CAGGGAATCTTCCACTTGACTCAGATCAAGAAAGTCAGGAAGCAAGACTTCCAGAAAGAGGCACAGCACTTCCGACTGCTCGCTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529912.5
CDS CAA 72 bp GAGTTAGGATTCGAACCCAAAGCCCCTGCTTGTTGTTaGACTCTTGCGGTCACTCAGAACACAGCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: ELGFEPKAPACC*TLAVTQNTAAP
Trigger: GGGAGCAGCTGTGTTCTGAGTGACCGCAAGAGTCAAACAACAAGCAGGGGCTTTGGGTTCGAATCCTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CAA 72 bp GGCAGAGTTAGGATTCGAACCCAAAGCCCCTGCTTGTaGTTTGACTCTTGCGGTCACTCAGAACACAGCTGC +
Preference number: 6 (lower is better)
Translates to: GRVRIRTQSPCL*FDSCGHSEHSC
Trigger: GCAGCTGTGTTCTGAGTGACCGCAAGAGTCAAACAACAAGCAGGGGCTTTGGGTTCGAATCCTAACTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CAA 90 bp ACAACTGGGCATGCTCTCCTAGGCAAGGGGCCAGAAGGTCTGAGTTaGAATCTCGGCTTTACCACACACTTACTGTGCAACACTGGGCAT +
Preference number: 6 (lower is better)
Translates to: TTGHALLGKGPEGLS*NLGFTTHLLCNTGH
Trigger: ATGCCCAGTGTTGCACAGTAAGTGTGTGGTAAAGCCGAGATTCAAACTCAGACCTTCTGGCCCCTTGCCTAGGAGAGCATGCCCAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS GCA 72 bp ACTCAGGCAAAAGAGAATCTGCTAGACAACTGGGCATaGTCTCCTAGGCAAGGGGCCAGAAGGTCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: TQAKENLLDNWA*SPRQGARRSEF
Trigger: AAACTCAGACCTTCTGGCCCCTTGCCTAGGAGAGCATGCCCAGTTGTCTAGCAGATTCTCTTTTGCCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CCA 72 bp GGTGCCTTGGGACACCTGGTAGAACTGATCTCACTGTaGCCAGGGTCTGCTTTGTCCTCTTTCTTATGTTTC +
Preference number: 6 (lower is better)
Translates to: GALGHLVELISL*PGSALSSFLCF
Trigger: GAAACATAAGAAAGAGGACAAAGCAGACCCTGGCCACAGTGAGATCAGTTCTACCAGGTGTCCCAAGGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528789.1
CDS CAA 72 bp CATGCTCTCCTAGGCAAGGGGCCAGAAGGTCTGAGTTaGAATCTCGGCTTTACCACACACTTACTGTGCAAC +
Preference number: 6 (lower is better)
Translates to: HALLGKGPEGLS*NLGFTTHLLCN
Trigger: GTTGCACAGTAAGTGTGTGGTAAAGCCGAGATTCAAACTCAGACCTTCTGGCCCCTTGCCTAGGAGAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS CAA 72 bp ACTGGCAGAGTTAGGATTCGAACCCAAAGCCCCTGCTaGTTGTTTGACTCTTGCGGTCACTCAGAACACAGC +
Preference number: 6 (lower is better)
Translates to: TGRVRIRTQSPC*LFDSCGHSEHS
Trigger: GCTGTGTTCTGAGTGACCGCAAGAGTCAAACAACAAGCAGGGGCTTTGGGTTCGAATCCTAACTCTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS GCA 72 bp CAAACTGGCAGAGTTAGGATTCGAACCCAAAGCCCCTaGTTGTTGTTTGACTCTTGCGGTCACTCAGAACAC +
Preference number: 6 (lower is better)
Translates to: QTGRVRIRTQSP*LLFDSCGHSEH
Trigger: GTGTTCTGAGTGACCGCAAGAGTCAAACAACAAGCAGGGGCTTTGGGTTCGAATCCTAACTCTGCCAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CCA 72 bp CTGCCCAAGGCCACACAGCTAAGATATAGCAGAGTCTaGATTCAAACTGGCAGAGTTAGGATTCGAACCCAA +
Preference number: 6 (lower is better)
Translates to: LPKATQLRYSRV*IQTGRVRIRTQ
Trigger: TTGGGTTCGAATCCTAACTCTGCCAGTTTGAATCCAGACTCTGCTATATCTTAGCTGTGTGGCCTTGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS TCA 72 bp CCTCTAAGTGTGACAAAGTTCTTCTTCTCTTGGAGCTaGAAGCTGCCTCTCTGCATTTCTCACCAACCTGAT +
Preference number: 6 (lower is better)
Translates to: PLSVTKFFFSWS*KLPLCISHQPD
Trigger: ATCAGGTTGGTGAGAAATGCAGAGAGGCAGCTTTCAGCTCCAAGAGAAGAAGAACTTTGTCACACTTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CCA 72 bp AGCTGCCTCTCTGCATTTCTCACCAACCTGATATGGTaGAATGAGAAGACTGATATTTTTAGTGCCTCGTGT +
Preference number: 6 (lower is better)
Translates to: SCLSAFLTNLIW*NEKTDIFSASC
Trigger: ACACGAGGCACTAAAAATATCAGTCTTCTCATTCCACCATATCAGGTTGGTGAGAAATGCAGAGAGGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CCA 72 bp GAAAGCTGCCTCTCTGCATTTCTCACCAACCTGATATaGTGGAATGAGAAGACTGATATTTTTAGTGCCTCG +
Preference number: 6 (lower is better)
Translates to: ESCLSAFLTNLI*WNEKTDIFSAS
Trigger: CGAGGCACTAAAAATATCAGTCTTCTCATTCCACCATATCAGGTTGGTGAGAAATGCAGAGAGGCAGCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534159.5
CDS CCA 72 bp TTTCTCCTTCTTTCTAGCTCTAAAAGAGATGTCATCTaGGCCACTCAGGCAAAAGAGAATCTGCTAGACAAC +
Preference number: 6 (lower is better)
Translates to: FLLLSSSKRDVI*ATQAKENLLDN
Trigger: GTTGTCTAGCAGATTCTCTTTTGCCTGAGTGGCCCAGATGACATCTCTTTTAGAGCTAGAAAGAAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5
CDS GCA 72 bp TATCTCACAGGGCAGTTAGGGAATCAAGCAGTGAAATaGTGTACAGATTTATATCATGGTATCAGCGTTAAT +
Preference number: 6 (lower is better)
Translates to: YLTGQLGNQAVK*CTDLYHGISVN
Trigger: ATTAACGCTGATACCATGATATAAATCTGTACAGCATTTCACTGCTTGATTCCCTAACTGCCCTGTGAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376324.7
ENST00000528471.1
ENST00000534276.5