Pregenerated sensors for CFDP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000153774Ensembl transcript IDs: ENST00000283882.4, ENST00000562602.1, ENST00000564286.1, ENST00000564793.1, ENST00000565646.5, ENST00000566254.1, ENST00000566901.5, ENST00000569341.1, ENST00000570103.5, ENST00000570279.1, ENST00000612761.1
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGGCCAGGAGTGCTGACCAGCCTCAATAAAATGTCAGCTTGCTaGCAAAGGATCCAGATCAGTGGAATTGTCCAGTTCTCTAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LWPGVLTSLNKMSAC*QRIQISGIVQFSKE Trigger: CTCCTTAGAGAACTGGACAATTCCACTGATCTGGATCCTTTGGCAGCAAGCTGACATTTTATTGAGGCTGGTCAGCACTCCTGGCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR GCA 90 bp | AGACTCTGGCCAGGAGTGCTGACCAGCCTCAATAAAATGTCAGCTTaGTGCCAAAGGATCCAGATCAGTGGAATTGTCCAGTTCTCTAAG | + |
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Preference number: 1 (lower is better) Translates to: RLWPGVLTSLNKMSA*CQRIQISGIVQFSK Trigger: CTTAGAGAACTGGACAATTCCACTGATCTGGATCCTTTGGCAGCAAGCTGACATTTTATTGAGGCTGGTCAGCACTCCTGGCCAGAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR CCA 90 bp | AACTCAACAATGGGCAGCAAAAACACACCCACAATTTCAAGACTCTaGCCAGGAGTGCTGACCAGCCTCAATAAAATGTCAGCTTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: NSTMGSKNTPTISRL*PGVLTSLNKMSACC Trigger: GCAGCAAGCTGACATTTTATTGAGGCTGGTCAGCACTCCTGGCCAGAGTCTTGAAATTGTGGGTGTGTTTTTGCTGCCCATTGTTGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR GCA 90 bp | CAGATCAGTGGAATTGTCCAGTTCTCTAAGGAGACAATGCAGAGTTaGCTGCAGACTGGTTCTGAAATCGAACCAGAACTAGAACTTAAA | + |
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Preference number: 1 (lower is better) Translates to: QISGIVQFSKETMQS*LQTGSEIEPELELK Trigger: TTTAAGTTCTAGTTCTGGTTCGATTTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGAACTGGACAATTCCACTGATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR-3UTR GCA 90 bp | CTCTGGCCAGGAGTGCTGACCAGCCTCAATAAAATGTCAGCTTGCTGCCAAAGGGAGACAATGCAGAGTTaGCTGCAGACTGGTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LWPGVLTSLNKMSACCQRETMQS*LQTGSE Trigger: TTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTC...CCTTTGGCAGCAAGCTGACATTTTATTGAGGCTGGTCAGCACTCCTGGCCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR-3UTR TCA 90 bp | CAACAATGGGCAGCAAAAACACACCCACAATTTCAAGACTCTGGCCAGGAGTGCCTCTTAATCACCTGCTaGAGGCTAATTCCATACGTT | + |
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Preference number: 2 (lower is better) Translates to: QQWAAKTHPQFQDSGQECLLITC*RLIPYV Trigger: AACGTATGGAATTAGCCTTCAGCAGGTGATTAAGAG...GCACTCCTGGCCAGAGTCTTGAAATTGTGGGTGTGTTTTTGCTGCCCATTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569341.1 |
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| 3UTR CAA 90 bp | TCAATAAAATGTCAGCTTGCTGCCAAAGGATCCAGATCAGTGGAATaGTCCAGTTCTCTAAGGAGACAATGCAGAGTTGCCTGCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: SIKCQLAAKGSRSVE*SSSLRRQCRVACRL Trigger: CAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGAACTGGACAATTCCACTGATCTGGATCCTTTGGCAGCAAGCTGACATTTTATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR GCA 72 bp | CCAGGAGTGCTGACCAGCCTCAATAAAATGTCAGCTTaGTGCCAAAGGATCCAGATCAGTGGAATTGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: PGVLTSLNKMSA*CQRIQISGIVQ Trigger: CTGGACAATTCCACTGATCTGGATCCTTTGGCAGCAAGCTGACATTTTATTGAGGCTGGTCAGCACTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR GCA 72 bp | GGAGTGCTGACCAGCCTCAATAAAATGTCAGCTTGCTaGCAAAGGATCCAGATCAGTGGAATTGTCCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: GVLTSLNKMSAC*QRIQISGIVQF Trigger: GAACTGGACAATTCCACTGATCTGGATCCTTTGGCAGCAAGCTGACATTTTATTGAGGCTGGTCAGCACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR GCA 72 bp | GGAATTGTCCAGTTCTCTAAGGAGACAATGCAGAGTTaGCTGCAGACTGGTTCTGAAATCGAACCAGAACTA | + |
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Preference number: 3 (lower is better) Translates to: GIVQFSKETMQS*LQTGSEIEPEL Trigger: TAGTTCTGGTTCGATTTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGAACTGGACAATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| 3UTR GCA 72 bp | AGATCAGTGGAATTGTCCAGTTCTCTAAGGAGACAATaGAGAGTTGCCTGCAGACTGGTTCTGAAATCGAAC | + |
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Preference number: 3 (lower is better) Translates to: RSVELSSSLRRQ*RVACRLVLKSN Trigger: GTTCGATTTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGAACTGGACAATTCCACTGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR TCA 90 bp | CAGCAAAAACACACCCACAATTTCAAGACTCTGGCCAGGAGTGCTGACCAGCCTCCTGCAGACTGGTTCTaGAATCGAACCAGAACTAGA | + |
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Preference number: 4 (lower is better) Translates to: QQKHTHNFKTLARSADQPPADWF*NRTRTR Trigger: TCTAGTTCTGGTTCGATTTCAGAACCAGTCTGCAGG...AGGCTGGTCAGCACTCCTGGCCAGAGTCTTGAAATTGTGGGTGTGTTTTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR GCA 90 bp | TCAAGACTCTGGCCAGGAGTGCTGACCAGCCTCAATAAAATGTCAGCTTGCTGCGAGACAATGCAGAGTTaGCTGCAGACTGGTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SRLWPGVLTSLNKMSACCETMQS*LQTGSE Trigger: TTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTC...GCAGCAAGCTGACATTTTATTGAGGCTGGTCAGCACTCCTGGCCAGAGTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR CCA 90 bp | CAAAAACACACCCACAATTTCAAGACTCTGGCCAGGAGTGCTGACCAGCCTCAAACAATTTCAAGACTCTaGCCAGGAGTGCTGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: QKHTHNFKTLARSADQPQTISRL*PGVLTS Trigger: GCTGGTCAGCACTCCTGGCCAGAGTCTTGAAATTGT...TTGAGGCTGGTCAGCACTCCTGGCCAGAGTCTTGAAATTGTGGGTGTGTTTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR TCA 90 bp | ACAATGGGCAGCAAAAACACACCCACAATTTCAAGACTCTGGCCAGGAGTGCTGCCTGCAGACTGGTTCTaGAATCGAACCAGAACTAGA | + |
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Preference number: 4 (lower is better) Translates to: TMGSKNTPTISRLWPGVLPADWF*NRTRTR Trigger: TCTAGTTCTGGTTCGATTTCAGAACCAGTCTGCAGG...CAGCACTCCTGGCCAGAGTCTTGAAATTGTGGGTGTGTTTTTGCTGCCCATTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR TCA 90 bp | ACACCCACAATTTCAAGACTCTGGCCAGGAGTGCTGACCAGCCTCAATAAAATGTCTGGCCAGGAGTGCTaGCCAGCCTCAATAAAATGT | + |
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Preference number: 4 (lower is better) Translates to: TPTISRLWPGVLTSLNKMSGQEC*PASIKC Trigger: ACATTTTATTGAGGCTGGTCAGCACTCCTGGCCAGA...CATTTTATTGAGGCTGGTCAGCACTCCTGGCCAGAGTCTTGAAATTGTGGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR GCA 90 bp | CAAAAACACACCCACAATTTCAAGACTCTGGCCAGGAGTGCTGACCAGCCTCAATCTCTAAGGAGACAATaGAGAGTTGCCTGCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: QKHTHNFKTLARSADQPQSLRRQ*RVACRL Trigger: CAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGA...TTGAGGCTGGTCAGCACTCCTGGCCAGAGTCTTGAAATTGTGGGTGTGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR CCA 90 bp | TCCAGTTCTCTAAGGAGACAATGCAGAGTTGCCTGCAGACTGGTTCTGAAATCGACAATTTCAAGACTCTaGCCAGGAGTGCTGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSLRRQCRVACRLVLKSTISRL*PGVLTS Trigger: GCTGGTCAGCACTCCTGGCCAGAGTCTTGAAATTGT...CGATTTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGAACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR TCA 90 bp | AACTCAACAATGGGCAGCAAAAACACACCCACAATTTCAAGACTCTGGCCAGGATCTGGCCAGGAGTGCTaGCCAGCCTCAATAAAATGT | + |
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Preference number: 4 (lower is better) Translates to: NSTMGSKNTPTISRLWPGSGQEC*PASIKC Trigger: ACATTTTATTGAGGCTGGTCAGCACTCCTGGCCAGA...TCCTGGCCAGAGTCTTGAAATTGTGGGTGTGTTTTTGCTGCCCATTGTTGAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR TCA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCATTGGTCCCACATCATTaGGGAAGCTGGCCCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: DLAGKQMMRNTVKHFTDALVPHH*GSWPRV Trigger: AACTCTGGGCCAGCTTCCTCAATGATGTGGGACCAA...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACCGAATTCCTCCATGTTaGTGCCGCTCGACGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDRIPPC*CRSTLV Trigger: GACCAGCGTCGAGCGGCAGCAACATGGAGGAATTCG...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGAGCTGCCGCTCGACGCTaGTCAAACTCACAAGACCGC | + |
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Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRAAARR*SNSQDR Trigger: GCGGTCTTGTGAGTTTGACCAGCGTCGAGCGGCAGC...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CCA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCACTTGTCTTCTCTTCCTaGCTGGAATGCTCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: DLAGKQMMRNTVKHFTDALVFSS*LECSGP Trigger: AGGCCCAGAGCATTCCAGCCAGGAAGAGAAGACAAG...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR TCA 90 bp | AGTGGAATTGTCCAGTTCTCTAAGGAGACAATGCAGAGTTGCCTGCAGACTGGTCTCTTAATCACCTGCTaGAGGCTAATTCCATACGTT | + |
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Preference number: 4 (lower is better) Translates to: SGIVQFSKETMQSCLQTGLLITC*RLIPYV Trigger: AACGTATGGAATTAGCCTTCAGCAGGTGATTAAGAG...ACCAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGAACTGGACAATTCCACT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569341.1 |
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| CDS-3UTR GCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACCCCCGACAGCGCTTTaGACATGCGCAGAGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRPPTAL*TCAEST Trigger: AGTACTCTCTGCGCATGTGCAAAGCGCTGTCGGGGG...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | TCCAGTTCTCTAAGGAGACAATGCAGAGTTGCCTGCAGACTGGTTCTGAAATCGAAAATGTCAGCTTGCTaGCAAAGGATCCAGATCAGT | + |
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Preference number: 4 (lower is better) Translates to: SSSLRRQCRVACRLVLKSKMSAC*QRIQIS Trigger: ACTGATCTGGATCCTTTGGCAGCAAGCTGACATTTT...CGATTTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGAACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR TCA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCATTTCCTGGCATCCTCTaGTCCAATGCCTTTTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: DLAGKQMMRNTVKHFTDAFPGIL*SNAFFL Trigger: CAGGAAAAAGGCATTGGATCAGAGGATGCCAGGAAA...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCCTTTTTCCTGCTCTaGAGCGTCATCTTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDAFFLL*SVIFLL Trigger: GAGGAGGAAGATGACGCTGCAGAGCAGGAAAAAGGC...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CCA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCATCCCTCGATTATGGATaGCCAGTTCTTCACCAATCC | + |
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Preference number: 4 (lower is better) Translates to: DLAGKQMMRNTVKHFTDASLDYG*PVLHQS Trigger: GGATTGGTGAAGAACTGGCCATCCATAATCGAGGGA...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CCA 90 bp | CTAAGGAGACAATGCAGAGTTGCCTGCAGACTGGTTCTGAAATCGAACCAGAACCAAATTTCTTCTTCCTaGCAACTCTTAATCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: LRRQCRVACRLVLKSNQNQISSS*QLLITC Trigger: GCAGGTGATTAAGAGTTGCCAGGAAGAAGAAATTTG...GTTCTGGTTCGATTTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTCCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569341.1 |
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| CDS-3UTR GCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGAATTCCTCCATGTTGCTaGCGCTCGACGCTGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRIPPCC*RSTLVK Trigger: TTTGACCAGCGTCGAGCGGCAGCAACATGGAGGAAT...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACCCAATGCCTTTTTCCTaGTCTGCAGCGTCATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDPMPFS*SAASSS Trigger: GGAAGATGACGCTGCAGAGCAGGAAAAAGGCATTGG...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | ATGAATAACTCAACAATGGGCAGCAAAAACACACCCACAATTTCAAGACTCTGGGAGACAATGCAGAGTTaGCTGCAGACTGGTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: MNNSTMGSKNTPTISRLWETMQS*LQTGSE Trigger: TTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTC...CCAGAGTCTTGAAATTGTGGGTGTGTTTTTGCTGCCCATTGTTGAGTTATTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR GCA 90 bp | ATAACTCAACAATGGGCAGCAAAAACACACCCACAATTTCAAGACTCTGGCCAGAAAATGTCAGCTTGCTaGCAAAGGATCCAGATCAGT | + |
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Preference number: 4 (lower is better) Translates to: ITQQWAAKTHPQFQDSGQKMSAC*QRIQIS Trigger: ACTGATCTGGATCCTTTGGCAGCAAGCTGACATTTT...CTGGCCAGAGTCTTGAAATTGTGGGTGTGTTTTTGCTGCCCATTGTTGAGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR CCA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACTCTCCCAGTCCAGTTTaGACTTCTCAAGGGTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDSPSPV*TSQGCS Trigger: TGAGCACCCTTGAGAAGTCCAAACTGGACTGGGAGA...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CCA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCATCTTTCCCTCGATTATaGATGGCCAGTTCTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: DLAGKQMMRNTVKHFTDASFPRL*MASSSP Trigger: TGGTGAAGAACTGGCCATCCATAATCGAGGGAAAGA...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR TCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGAGCTTCCCTCAGATTCTaGATTGGCATCCTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRASLRF*IGILLF Trigger: GAAGAGGAGGATGCCAATTCAGAATCTGAGGGAAGC...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR TCA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCACTTTCTCATTCTGCTTaGAGAAGGATTTGGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: DLAGKQMMRNTVKHFTDALSHSA*RRIWPL Trigger: AAGAGGCCAAATCCTTCTTCAAGCAGAATGAGAAAG...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCACCAAAAGGCTGCTCATaGCACTTGATCTTTTTAACC | + |
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Preference number: 4 (lower is better) Translates to: DLAGKQMMRNTVKHFTDAPKGCS*HLIFLT Trigger: GGTTAAAAAGATCAAGTGGCATGAGCAGCCTTTTGG...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | AGTTGCCTGCAGACTGGTTCTGAAATCGAACCAGAACTAGAACTTAAAAACAAATCTCTAAGGAGACAATaGAGAGTTGCCTGCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: SCLQTGSEIEPELELKNKSLRRQ*RVACRL Trigger: CAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGA...TTTGTTTTTAAGTTCTAGTTCTGGTTCGATTTCAGAACCAGTCTGCAGGCAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR CCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGATCTTCTCTTCCTGGCTaGAATGCTCTGGGCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRSSLPG*NALGLS Trigger: AGAAAGGCCCAGAGCATTCCAGCCAGGAAGAGAAGA...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR TCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGAATTTCAAACTGCCTGTaGTCCACTCGGTCAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRISNCL*STRSRK Trigger: CTTCCTTGACCGAGTGGATCACAGGCAGTTTGAAAT...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACTGGGTTTTCTGTGTCTaGTCTTCACCATCCACTTCA | + |
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Preference number: 4 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDWVFCV*SSPSTS Trigger: TGAAGTGGATGGTGAAGAGCAGACACAGAAAACCCA...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACTTCCTCCTCACTACTaGTTCCCTCAGATTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRLPPHY*FPQILN Trigger: ATTCAGAATCTGAGGGAAGCAGTAGTGAGGAGGAAG...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR GCA 90 bp | CTTAATCACCTGCTGAAGGCTAATTCCATACGTTGTCTAGAGCAGTATTTTGTCAATAAAATGTCAGCTTaGTGCCAAAGGATCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: LNHLLKANSIRCLEQYFVNKMSA*CQRIQI Trigger: GATCTGGATCCTTTGGCAGCAAGCTGACATTTTATT...GACAAAATACTGCTCTAGACAACGTATGGAATTAGCCTTCAGCAGGTGATTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000569341.1 |
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| CDS-3UTR GCA 90 bp | ATGAATAACTCAACAATGGGCAGCAAAAACACACCCACAATTTCAAGACTCTGGAATAAAATGTCAGCTTaGTGCCAAAGGATCCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: MNNSTMGSKNTPTISRLWNKMSA*CQRIQI Trigger: GATCTGGATCCTTTGGCAGCAAGCTGACATTTTATT...CCAGAGTCTTGAAATTGTGGGTGTGTTTTTGCTGCCCATTGTTGAGTTATTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR TCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGATCATTTTGCTCAGCCTaGGATCTCGCTCAATTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRSFCSA*DLAQFQ Trigger: TTGAAATTGAGCGAGATCTCAGGCTGAGCAAAATGA...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR TCA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGATACCAACAATTTACTTaGACTTGTCTCTTCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRPCWETDDEKHCKTFHRYQQFT*TCLFSL Trigger: GAGACTGAAGAGACAAGTTCAAGTAAATTGTTGGTA...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| 3UTR CAA 72 bp | TGTCTAGAGCAGTATTTTGTCAAATTCAGGTTGCAGTaGATTGTGAAATCAATTCAGCAGGTCATAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLEQYFVKFRLQ*IVKSIQQVITV Trigger: AACTGTTATGACCTGCTGAATTGATTTCACAATCAACTGCAACCTGAATTTGACAAAATACTGCTCTAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569341.1 |
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| 3UTR CAA 72 bp | ATACGTTGTCTAGAGCAGTATTTTGTCAAATTCAGGTaGCAGTTGATTGTGAAATCAATTCAGCAGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: IRCLEQYFVKFR*QLIVKSIQQVI Trigger: TATGACCTGCTGAATTGATTTCACAATCAACTGCAACCTGAATTTGACAAAATACTGCTCTAGACAACGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569341.1 |
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| CDS CCA 90 bp | GAAGTCTTCGGAGTCGAATTCCTCCATGTTGCTGCCGCTCGACGCTaGTCAAACTCACAAGACCGCAGCAGCCGCCTCCAACGGCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVFGVEFLHVAAARR*SNSQDRSSRLQRQS Trigger: GCTTTGCCGTTGGAGGCGGCTGCTGCGGTCTTGTGAGTTTGACCAGCGTCGAGCGGCAGCAACATGGAGGAATTCGACTCCGAAGACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283882.4 ENST00000564286.1 ENST00000565646.5 ENST00000566901.5 |
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| CDS-3UTR CAA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCAGCCCCCGACAGCGCTTaGCACATGCGCAGAGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: DLAGKQMMRNTVKHFTDAAPDSA*HMRREY Trigger: GTACTCTCTGCGCATGTGCAAAGCGCTGTCGGGGGC...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCATCGAATTCCTCCATGTaGCTGCCGCTCGACGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: DLAGKQMMRNTVKHFTDASNSSM*LPLDAG Trigger: ACCAGCGTCGAGCGGCAGCAACATGGAGGAATTCGA...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS TCA 90 bp | TTCATTTTGCTCAGCCTGAGATCTCGCTCAATTTCAAACTGCCTGTaGTCCACTCGGTCAAGGAAGGCTTTCCGTTCAATGTACCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: FILLSLRSRSISNCL*STRSRKAFRSMYPS Trigger: AGAGGGGTACATTGAACGGAAAGCCTTCCTTGACCGAGTGGATCACAGGCAGTTTGAAATTGAGCGAGATCTCAGGCTGAGCAAAATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283882.4 ENST00000564793.1 ENST00000570103.5 |
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| CDS TCA 90 bp | TGTTCTAGACTCTTGATTCAGCAGCTCTGTACAGAGGTGGTCACCTaGACTTTGGAAAATGTCACCAGAGGATTCTCATGCTCAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSRLLIQQLCTEVVT*TLENVTRGFSCSAK Trigger: CTTGGCTGAGCATGAGAATCCTCTGGTGACATTTTCCAAAGTTCAGGTGACCACCTCTGTACAGAGCTGCTGAATCAAGAGTCTAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562602.1 |
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| CDS TCA 90 bp | TCGGTCAAGGAAGGCTTTCCGTTCAATGTACCTGTTCTAGACTCTTaGTTCAGCAGCTCTGTACAGAGGTGGTCACCTGAACTTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVKEGFPFNVPVLDS*FSSSVQRWSPELWK Trigger: TTTCCAAAGTTCAGGTGACCACCTCTGTACAGAGCTGCTGAATCAAGAGTCTAGAACAGGTACATTGAACGGAAAGCCTTCCTTGACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562602.1 |
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| CDS TCA 90 bp | TTCATTTTGCTCAGCCTGAGATCTCGCTCAATTTCAAACTGCCTGTaGTCCACTCGGTCAAGGAAGGCTTTCCGTTCAATGTACCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FILLSLRSRSISNCL*STRSRKAFRSMYLF Trigger: GAACAGGTACATTGAACGGAAAGCCTTCCTTGACCGAGTGGATCACAGGCAGTTTGAAATTGAGCGAGATCTCAGGCTGAGCAAAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562602.1 |
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| CDS-3UTR CAA 90 bp | TCTCTAAGGAGACAATGCAGAGTTGCCTGCAGACTGGTTCTGAAATCGAACCAGTCCAGATCAGTGGAATaGTCCAGTTCTCTAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLRRQCRVACRLVLKSNQSRSVE*SSSLRR Trigger: TCTCCTTAGAGAACTGGACAATTCCACTGATCTGGA...CTGGTTCGATTTCAGAACCAGTCTGCAGGCAACTCTGCATTGTCTCCTTAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS TCA 90 bp | GCTCTTGATTTAGCCCGTAACATCAAGGTTTCATTTTGCTCAGCCTaGGATCTCGCTCAATTTCAAACTGCCTGTGATCCACTCGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALDLARNIKVSFCSA*DLAQFQTACDPLGQ Trigger: TTGACCGAGTGGATCACAGGCAGTTTGAAATTGAGCGAGATCTCAGGCTGAGCAAAATGAAACCTTGATGTTACGGGCTAAATCAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000283882.4 ENST00000562602.1 ENST00000564793.1 ENST00000570103.5 |
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| CDS TCA 90 bp | CAAAGGCAAAGCAGCATCATAATTCTCTCTCTCAGGCAAGGAGTCTaGTCTGCAGCGAAAGTAGGTATTTGCACTGAAAGCTTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QRQSSIIILSLRQGV*SAAKVGICTESFSN Trigger: GTTGGAGAAGCTTTCAGTGCAAATACCTACTTTCGCTGCAGATCAGACTCCTTGCCTGAGAGAGAGAATTATGATGCTGCTTTGCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566901.5 |
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| CDS-3UTR CAA 90 bp | GACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACGCAGGCTGCTCATGCCACTaGATCTTTTTAACCCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: DLAGKQMMRNTVKHFTDAGCSCH*IFLTLT Trigger: GGTCAGGGTTAAAAAGATCAAGTGGCATGAGCAGCC...TGCGTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACCTCTCCCAGTCCAGTTaGGACTTCTCAAGGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDLSQSS*DFSRVL Trigger: GAGCACCCTTGAGAAGTCCAAACTGGACTGGGAGAG...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACTTTGGTCCCACATCATaGAGGAAGCTGGCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDFGPTS*RKLAQS Trigger: ACTCTGGGCCAGCTTCCTCAATGATGTGGGACCAAA...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGAATCCCCTCTTCCTCCTaGAAGCTCTCCCAGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KRPCWETDDEKHCKTFHRIPSSS*KLSQSS Trigger: ACTGGACTGGGAGAGCTTCAAGGAGGAAGAGGGGAT...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | AAAGGATCCAGATCAGTGGAATTGTCCAGTTCTCTAAGGAGACAATGCAGAGTTTCCAGATCAGTGGAATaGTCCAGTTCTCTAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGSRSVELSSSLRRQCRVSRSVE*SSSLRR Trigger: TCTCCTTAGAGAACTGGACAATTCCACTGATCTGGA...AACTCTGCATTGTCTCCTTAGAGAACTGGACAATTCCACTGATCTGGATCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000612761.1 |
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| CDS-3UTR CAA 90 bp | AAAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACCCTCAGATTCTGAATaGGCATCCTCCTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KRPCWETDDEKHCKTFHRPSDSE*ASSSSS Trigger: AGAGGAAGAGGAGGATGCCAATTCAGAATCTGAGGG...TCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACTACTTGGGGGCACTTTaGATTTTGGTCCCACATCAT | + |
|
Preference number: 5 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDYLGAL*ILVPHH Trigger: ATGATGTGGGACCAAAATCAAAAGTGCCCCCAAGTA...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACCTCTCCTTTCTTAACTaGTGTACTTGGGGGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDLSFLN*CTWGHF Trigger: AAAGTGCCCCCAAGTACACAAGTTAAGAAAGGAGAG...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACTGCTTGAAGAAGGATTaGGCCTCTTTAGATGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDCLKKD*ASLDVA Trigger: TGCTACATCTAAAGAGGCCAAATCCTTCTTCAAGCA...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS-3UTR CAA 90 bp | AAAGACCTTGCTGGGAAACAGATGATGAGAAACACTGTAAAACATTTCACAGACACAATTTACTTGAACTaGTCTCTTCAGTCTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KDLAGKQMMRNTVKHFTDTIYLN*SLQSPL Trigger: GAGAGGAGACTGAAGAGACAAGTTCAAGTAAATTGT...GTCTGTGAAATGTTTTACAGTGTTTCTCATCATCTGTTTCCCAGCAAGGTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283882.4 |
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| CDS CCA 72 bp | GGAGTCGAATTCCTCCATGTTGCTGCCGCTCGACGCTaGTCAAACTCACAAGACCGCAGCAGCCGCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GVEFLHVAAARR*SNSQDRSSRLQ Trigger: TTGGAGGCGGCTGCTGCGGTCTTGTGAGTTTGACCAGCGTCGAGCGGCAGCAACATGGAGGAATTCGACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283882.4 ENST00000564286.1 ENST00000565646.5 ENST00000566901.5 |
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| CDS CAA 90 bp | TCCTCCTCCGACGTAGAGAAGTCTTCGGAGTCGAATTCCTCCATGTaGCTGCCGCTCGACGCTGGTCAAACTCACAAGACCGCAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSDVEKSSESNSSM*LPLDAGQTHKTAAA Trigger: GGCTGCTGCGGTCTTGTGAGTTTGACCAGCGTCGAGCGGCAGCAACATGGAGGAATTCGACTCCGAAGACTTCTCTACGTCGGAGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283882.4 ENST00000564286.1 ENST00000565646.5 ENST00000566901.5 |
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| CDS CCA 72 bp | AGAACAGAGCTCCAGTCCCTTCACTGGCCTAGGGGCTaGGCTCCTTTAATCCATCCCTCTTTCCCTCGATTA | + |
|
Preference number: 6 (lower is better) Translates to: RTELQSLHWPRG*APLIHPSFPRL Trigger: TAATCGAGGGAAAGAGGGATGGATTAAAGGAGCCCAGCCCCTAGGCCAGTGAAGGGACTGGAGCTCTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562602.1 |
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| CDS CAA 72 bp | GACGTAGAGAAGTCTTCGGAGTCGAATTCCTCCATGTaGCTGCCGCTCGACGCTGGTCAAACTCACAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: DVEKSSESNSSM*LPLDAGQTHKT Trigger: GGTCTTGTGAGTTTGACCAGCGTCGAGCGGCAGCAACATGGAGGAATTCGACTCCGAAGACTTCTCTACGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000283882.4 ENST00000564286.1 ENST00000565646.5 ENST00000566254.1 ENST00000566901.5 |
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| CDS TCA 72 bp | ATGCCACTTGATCTTTTTAACCCCCTCTGCCTGGTGTaGGCCAACAGGCCAACGTCCACACTGAACACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: MPLDLFNPLCLV*ANRPTSTLNTR Trigger: TCTGGTGTTCAGTGTGGACGTTGGCCTGTTGGCTCACACCAGGCAGAGGGGGTTAAAAAGATCAAGTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000570103.5 |
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| CDS TCA 72 bp | CTCAGCCTGAGATCTCGCTCAATTTCAAACTGCCTGTaGTCCACTCGGTCAAGGAAGGCTTTCCGTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LSLRSRSISNCL*STRSRKAFRSM Trigger: CATTGAACGGAAAGCCTTCCTTGACCGAGTGGATCACAGGCAGTTTGAAATTGAGCGAGATCTCAGGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283882.4 ENST00000562602.1 ENST00000564793.1 ENST00000570103.5 |
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| CDS GCA 72 bp | TTTCCTGCTCTGCAGCGTCATCTTCCTCCTCACTACTaGTTCCCTCAGATTCTGAATTGGCATCCTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPALQRHLPPHY*FPQILNWHPPL Trigger: AAGAGGAGGATGCCAATTCAGAATCTGAGGGAAGCAGTAGTGAGGAGGAAGATGACGCTGCAGAGCAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283882.4 ENST00000564286.1 ENST00000565646.5 ENST00000566901.5 |
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| CDS CAA 90 bp | TCTTCACCAATCCCCTCTTCCTCCTTGAAGCTCTCCCAGTCCAGTTaGGACTTCTCAAGGGTGCTCATTTTCTGCTTCTTGGCACCAATT | + |
|
Preference number: 6 (lower is better) Translates to: SSPIPSSSLKLSQSS*DFSRVLIFCFLAPI Trigger: AATTGGTGCCAAGAAGCAGAAAATGAGCACCCTTGAGAAGTCCAAACTGGACTGGGAGAGCTTCAAGGAGGAAGAGGGGATTGGTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000283882.4 ENST00000562602.1 ENST00000564793.1 ENST00000570103.5 |
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| CDS TCA 72 bp | AGGAGTCTGATCTGCAGCGAAAGTAGGTATTTGCACTaGAAGCTTCTCCAACGTGCCAAGTACATCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RSLICSESRYLH*KLLQRAKYIRE Trigger: CTCCCTGATGTACTTGGCACGTTGGAGAAGCTTTCAGTGCAAATACCTACTTTCGCTGCAGATCAGACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566901.5 |
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| CDS TCA 72 bp | CTCTTGATTCAGCAGCTCTGTACAGAGGTGGTCACCTaGACTTTGGAAAATGTCACCAGAGGATTCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: LLIQQLCTEVVT*TLENVTRGFSC Trigger: GCATGAGAATCCTCTGGTGACATTTTCCAAAGTTCAGGTGACCACCTCTGTACAGAGCTGCTGAATCAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562602.1 |
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| CDS TCA 72 bp | GAAGGCTTTCCGTTCAATGTACCTGTTCTAGACTCTTaGTTCAGCAGCTCTGTACAGAGGTGGTCACCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: EGFPFNVPVLDS*FSSSVQRWSPE Trigger: TTCAGGTGACCACCTCTGTACAGAGCTGCTGAATCAAGAGTCTAGAACAGGTACATTGAACGGAAAGCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000562602.1 |
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| CDS CAA 72 bp | ACCTCAATGGCTGCAGCAGAAGTTCCAGCTGAGGTTTaGTTATTATGGCAGTGGCAGATCTTATGGCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: TSMAAAEVPAEV*LLWQWQILWQW Trigger: CCATTGCCATAAGATCTGCCACTGCCATAATAACAAAACCTCAGCTGGAACTTCTGCTGCAGCCATTGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564793.1 |
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| CDS TCA 72 bp | AGCAGCATCATAATTCTCTCTCTCAGGCAAGGAGTCTaGTCTGCAGCGAAAGTAGGTATTTGCACTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSIIILSLRQGV*SAAKVGICTES Trigger: GCTTTCAGTGCAAATACCTACTTTCGCTGCAGATCAGACTCCTTGCCTGAGAGAGAGAATTATGATGCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000566901.5 |
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| CDS CAA 90 bp | ATCTTTTTAACCTCAATGGCTGCAGCAGAAGTTCCAGCTGAGGTTTaGTTATTATGGCAGTGGCAGATCTTATGGCAATGGAGGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: IFLTSMAAAEVPAEV*LLWQWQILWQWRVL Trigger: CAAGACCCTCCATTGCCATAAGATCTGCCACTGCCATAATAACAAAACCTCAGCTGGAACTTCTGCTGCAGCCATTGAGGTTAAAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564793.1 |
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| CDS TCA 72 bp | TTAGCCCGTAACATCAAGGTTTCATTTTGCTCAGCCTaGGATCTCGCTCAATTTCAAACTGCCTGTGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: LARNIKVSFCSA*DLAQFQTACDP Trigger: TGGATCACAGGCAGTTTGAAATTGAGCGAGATCTCAGGCTGAGCAAAATGAAACCTTGATGTTACGGGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000283882.4 ENST00000562602.1 ENST00000564793.1 ENST00000570103.5 |
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| CDS CAA 90 bp | GCTAATTCCATACGTTGTCTAGAGCAGTATTTTGTCAAATTCAGGTaGCAGTTGATTGTGAAATCAATTCAGCAGGTCATAACAGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ANSIRCLEQYFVKFR*QLIVKSIQQVITVF Trigger: AAAAACTGTTATGACCTGCTGAATTGATTTCACAATCAACTGCAACCTGAATTTGACAAAATACTGCTCTAGACAACGTATGGAATTAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000569341.1 ENST00000570279.1 |
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