Pregenerated sensors for CDPF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000205643Ensembl transcript IDs: ENST00000314567.8, ENST00000381037.4, ENST00000404583.5, ENST00000404744.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCCAGGGTGCCGCCCGATaGCCTAGCCCCAGTTGCACT | + |
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Preference number: 2 (lower is better) Translates to: PTIAGPSVQGERRVSKCFQGAAR*PSPSCT Trigger: AGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTG...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| 3UTR-3UTR CCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCGCACTCACTCAGGCCTaGGCCCTGAGGGGCATGTGG | + |
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Preference number: 2 (lower is better) Translates to: PTIAGPSVQGERRVSKCFALTQA*ALRGMW Trigger: CCACATGCCCCTCAGGGCCCAGGCCTGAGTGAGTGC...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| 3UTR-3UTR GCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCTGCAGCCACCTACAGTaGACCATGGCCCCGACACAG | + |
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Preference number: 2 (lower is better) Translates to: PTIAGPSVQGERRVSKCFCSHLQ*TMAPTQ Trigger: CTGTGTCGGGGCCATGGTGCACTGTAGGTGGCTGCA...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| 3UTR-3UTR CCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCACCTACAGTGCACCATaGCCCCGACACAGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PTIAGPSVQGERRVSKCFTYSAP*PRHSVA Trigger: TGCCACACTGTGTCGGGGCCATGGTGCACTGTAGGT...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| 3UTR-3UTR GCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCTTACAGAGAGACCATTaGAGCCACCTACAGTGCACC | + |
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Preference number: 2 (lower is better) Translates to: PTIAGPSVQGERRVSKCFLQRDH*SHLQCT Trigger: GGTGCACTGTAGGTGGCTGCAATGGTCTCTCTGTAA...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| 3UTR-3UTR CCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCTCTGGCATCTGCCTTTaGACTACCCTCTTGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: PTIAGPSVQGERRVSKCFSGICL*TTLLLQ Trigger: CTGTAGCAAGAGGGTAGTCCAAAGGCAGATGCCAGA...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| 3UTR-3UTR CCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCTGGCTGTGTCTTGTCTaGCATCTGCCTTTGGACTAC | + |
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Preference number: 2 (lower is better) Translates to: PTIAGPSVQGERRVSKCFWLCLV*HLPLDY Trigger: GTAGTCCAAAGGCAGATGCCAGACAAGACACAGCCA...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| 3UTR-3UTR CAA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCGTCTGGCATCTGCCTTaGGACTACCCTCTTGCTACA | + |
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Preference number: 3 (lower is better) Translates to: PTIAGPSVQGERRVSKCFVWHLP*DYPLAT Trigger: TGTAGCAAGAGGGTAGTCCAAAGGCAGATGCCAGAC...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| 3UTR-3UTR CAA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCCTTACAGAGAGACCATaGCAGCCACCTACAGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PTIAGPSVQGERRVSKCFLTERP*QPPTVH Trigger: GTGCACTGTAGGTGGCTGCAATGGTCTCTCTGTAAG...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| 3UTR-3UTR CAA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCGGCTGGGGGTCCTCTTaGATGGAGCTTTCCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PTIAGPSVQGERRVSKCFGWGSS*MELSFS Trigger: AGAAAAGGAAAGCTCCATCAAAGAGGACCCCCAGCC...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR GCA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGGCACCCAGGGCTGAGTaGGAGATGGCAGGGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: CRVPPDDLAPVALTSENRAPRAE*EMAGGK Trigger: CTTGCCCCCTGCCATCTCGCACTCAGCCCTGGGTGC...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR TCA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGCGGAGGGGCCCGAGCTaGAGACAGAGTCTGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: CRVPPDDLAPVALTSENRRRGPS*RQSLRE Trigger: TTCCCTCAGACTCTGTCTTCAGCTCGGGCCCCTCCG...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR GCA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGGGAGACCCCAACTATTaGCGGGCCAAGTGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CRVPPDDLAPVALTSENRGDPNY*RAKCPG Trigger: CCCTGGACACTTGGCCCGGCAATAGTTGGGGTCTCC...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR GCA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGCCACACACACCAGCCTaGTGCACAAACTGCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: CRVPPDDLAPVALTSENRPHTPA*CTNCST Trigger: CGTGCTGCAGTTTGTGCAGCAGGCTGGTGTGTGTGG...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR CCA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGCCATCGACTGGGTGTTaGGGGGCTTCTGTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: CRVPPDDLAPVALTSENRPSTGC*GASVPH Trigger: ATGTGGGACAGAAGCCCCCCAACACCCAGTCGATGG...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR CCA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGTGGCTGTGTCTTGTCTaGCATCTGCCTTTGGACTAC | + |
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Preference number: 4 (lower is better) Translates to: CRVPPDDLAPVALTSENRWLCLV*HLPLDY Trigger: GTAGTCCAAAGGCAGATGCCAGACAAGACACAGCCA...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR CCA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGGACAGTCCCTTCTCCTaGAGATCCCTCCAAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: CRVPPDDLAPVALTSENRDSPFS*RSLQEH Trigger: ATGTTCTTGGAGGGATCTCCAGGAGAAGGGACTGTC...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR GCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCGCACCCAGGGCTGAGTaGGAGATGGCAGGGGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFAPRAE*EMAGGK Trigger: CTTGCCCCCTGCCATCTCGCACTCAGCCCTGGGTGC...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| CDS-3UTR TCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCCGGAGGGGCCCGAGCTaGAGACAGAGTCTGAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFRRGPS*RQSLRE Trigger: TTCCCTCAGACTCTGTCTTCAGCTCGGGCCCCTCCG...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| CDS-3UTR TCA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGTCTTGCCGAATTTCCTaGGGAAAAGCATTGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: CRVPPDDLAPVALTSENRSCRIS*GKALMF Trigger: GAACATCAATGCTTTTCCTCAGGAAATTCGGCAAGA...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR GCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCGGAGACCCCAACTATTaGCGGGCCAAGTGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFGDPNY*RAKCPG Trigger: CCCTGGACACTTGGCCCGGCAATAGTTGGGGTCTCC...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| CDS-3UTR TCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCAGCCCACGGTATTCCTaGCTTGGAGTCGAGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFSPRYS*LGVEGD Trigger: GTCTCCCTCGACTCCAAGTCAGGAATACCGTGGGCT...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| CDS-3UTR GCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCCCACACACACCAGCCTaGTGCACAAACTGCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFPHTPA*CTNCST Trigger: CGTGCTGCAGTTTGTGCAGCAGGCTGGTGTGTGTGG...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR CCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCCCATCGACTGGGTGTTaGGGGGCTTCTGTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFPSTGC*GASVPH Trigger: ATGTGGGACAGAAGCCCCCCAACACCCAGTCGATGG...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| CDS-3UTR GCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCAACTGCATTCCAGCCTaGTGCACAAACTGCAGCACG | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFNCIPA*CTNCST Trigger: CGTGCTGCAGTTTGTGCAGCAGGCTGGAATGCAGTT...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404583.5 |
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| CDS-3UTR CCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCCCCAAGCACAGGACCTaGCACACAACAAGTGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFPKHRT*HTTSAH Trigger: ATGAGCACTTGTTGTGTGCCAGGTCCTGTGCTTGGG...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR CCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCGACAGTCCCTTCTCCTaGAGATCCCTCCAAGAACAT | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFDSPFS*RSLQEH Trigger: ATGTTCTTGGAGGGATCTCCAGGAGAAGGGACTGTC...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR GCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCTGGAGTAGAATAAACTaGATTCCGGGCCCACACACA | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFWSRIN*IPGPHT Trigger: TGTGTGTGGGCCCGGAATGCAGTTTATTCTACTCCA...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314567.8 |
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| CDS-3UTR GCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCTGGAGTAGAATAAACTaGATTCCAGCCTGCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFWSRIN*IPACCT Trigger: TGTGCAGCAGGCTGGAATGCAGTTTATTCTACTCCA...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000404583.5 |
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| CDS-3UTR TCA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCTCTTGCCGAATTTCCTaGGGAAAAGCATTGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: PTIAGPSVQGERRVSKCFSCRIS*GKALMF Trigger: GAACATCAATGCTTTTCCTCAGGAAATTCGGCAAGA...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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| CDS-3UTR CAA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGAGGAGACCCCAACTATaGCCGGGCCAAGTGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: CRVPPDDLAPVALTSENRRRPQL*PGQVSR Trigger: CCTGGACACTTGGCCCGGCAATAGTTGGGGTCTCCT...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR CAA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGGGCTGGGGGTCCTCTTaGATGGAGCTTTCCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: CRVPPDDLAPVALTSENRGWGSS*MELSFS Trigger: AGAAAAGGAAAGCTCCATCAAAGAGGACCCCCAGCC...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR CAA 90 bp | TGCAGGGTGCCGCCCGATGACCTAGCCCCAGTTGCACTCACGTCCGAGAACCGGGTCTGGCATCTGCCTTaGGACTACCCTCTTGCTACA | + |
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Preference number: 5 (lower is better) Translates to: CRVPPDDLAPVALTSENRVWHLP*DYPLAT Trigger: TGTAGCAAGAGGGTAGTCCAAAGGCAGATGCCAGAC...CCGGTTCTCGGACGTGAGTGCAACTGGGGCTAGGTCATCGGGCGGCACCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381037.4 ENST00000404744.1 |
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| CDS-3UTR CAA 90 bp | CCAACTATTGCCGGGCCAAGTGTCCAGGGAGAACGTCGGGTATCCAAATGTTTCAGGAGACCCCAACTATaGCCGGGCCAAGTGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PTIAGPSVQGERRVSKCFRRPQL*PGQVSR Trigger: CCTGGACACTTGGCCCGGCAATAGTTGGGGTCTCCT...GAAACATTTGGATACCCGACGTTCTCCCTGGACACTTGGCCCGGCAATAGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000314567.8 ENST00000381037.4 ENST00000404583.5 ENST00000404744.1 |
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