RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDHR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000148600

Ensembl transcript IDs: ENST00000332904.7, ENST00000372117.6, ENST00000459673.1, ENST00000622973.1, ENST00000623399.1, ENST00000623527.4, ENST00000624091.1

Found 1084 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGGTCCACAATCCTGATGGTGACTGGGACGGTGGCCTGGGCAGCTaGGCTCCCCGCAGGGCTCATTTCAGTCACCTGTACATGCAGCTC +
Preference number: 1 (lower is better)
Translates to: EVHNPDGDWDGGLGS*APRRAHFSHLYMQL
Trigger: GAGCTGCATGTACAGGTGACTGAAATGAGCCCTGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATTGTGGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CCA 90 bp AGTGTGCCATTCCTGCCTCCCAGCTCTTTCCCTGGAGGCCTACCATaGTGCCAGCCTGGAGCTCTGCCTGTCCTACTGGGACCTAGCAGA +
Preference number: 1 (lower is better)
Translates to: SVPFLPPSSFPGGLP*CQPGALPVLLGPSR
Trigger: TCTGCTAGGTCCCAGTAGGACAGGCAGAGCTCCAGGCTGGCACCATGGTAGGCCTCCAGGGAAAGAGCTGGGAGGCAGGAATGGCACACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp CAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTaGCCTTGCCGGGCTGCACTGGTAGGGTGGGAGAGTGGGCAATTA +
Preference number: 1 (lower is better)
Translates to: QCFPSFHAHPRPPNS*PCRAALVGWESGQL
Trigger: TAATTGCCCACTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp CACCCCACTGGCGGGGTCTCCTCCAGTGCTGACAACACTTGCCGGTaGCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCT +
Preference number: 1 (lower is better)
Translates to: HPTGGVSSSADNTCR*LKFGCTLLLFPSVA
Trigger: AGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACTGGAGGAGACCCCGCCAGTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp TGGCCTCACCCCACTGGCGGGGTCTCCTCCAGTGCTGACAACACTTaGCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGT +
Preference number: 1 (lower is better)
Translates to: WPHPTGGVSSSADNT*RCLKFGCTLLLFPS
Trigger: ACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACTGGAGGAGACCCCGCCAGTGGGGTGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp AGTAAGGCTGTGGTGCTGAAGGATGGGGAGCCCCGGTCCTTGGCCTaGACCTCTAGGGACCATAGGCAGTCCCTTCCAGGTGTGATGTTG +
Preference number: 1 (lower is better)
Translates to: SKAVVLKDGEPRSLA*TSRDHRQSLPGVML
Trigger: CAACATCACACCTGGAAGGGACTGCCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCCATCCTTCAGCACCACAGCCTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR CCA 90 bp GGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCCTTaGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCG +
Preference number: 1 (lower is better)
Translates to: GHFPIHGQFARLALP*SKFLGLSKRPPSVP
Trigger: CGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp TGGTTGTTGAGGTCCACAATCCTGATGGTGACTGGGACGGTGGCCTaGGCAGCTGGGCTCCCCGCAGGGCTCATTTCAGTCACCTGTACA +
Preference number: 1 (lower is better)
Translates to: WLLRSTILMVTGTVA*AAGLPAGLISVTCT
Trigger: TGTACAGGTGACTGAAATGAGCCCTGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATTGTGGACCTCAACAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR GCA 90 bp CTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTaGCTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGG +
Preference number: 1 (lower is better)
Translates to: LPGTSPSMASLQDWL*LGPSSWGCPRDHPR
Trigger: CCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp CATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTaGCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTT +
Preference number: 1 (lower is better)
Translates to: HPLVAKALKTVRMCH*LSTDANTPGRWTGL
Trigger: AAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CCA 90 bp GCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTaGCTCATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTT +
Preference number: 1 (lower is better)
Translates to: AGALSLAAPSSSFLV*LMLATGHFPIHGQF
Trigger: AAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp GACTGTCAGGATGTGCCACTGCCTGTCAACAGATGCCAACACCCCTaGCAGGTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCT +
Preference number: 1 (lower is better)
Translates to: DCQDVPLPVNRCQHP*QVDWPWIPSTPSVP
Trigger: AGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGCACATCCTGACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR GCA 90 bp GTCTCCTCCAGTGCTGACAACACTTGCCGGTGCCTTAAGTTTGGCTaGACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCGG +
Preference number: 1 (lower is better)
Translates to: VSSSADNTCRCLKFG*TLLLFPSVAHAGYR
Trigger: CCGGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACTGGAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp CAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGTCAACAGATaGCAACACCCCTGGCAGGTGGACTGGCCTTGGATTCCCTCAACG +
Preference number: 1 (lower is better)
Translates to: QGLEDCQDVPLPVNR*QHPWQVDWPWIPST
Trigger: CGTTGAGGGAATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CCA 90 bp CCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTAGGGTaGGAGAGTGGGCAATTAATTCTAGCTCCAGGTTCCATTCCTCTC +
Preference number: 1 (lower is better)
Translates to: PRPPNSCPCRAALVG*ESGQLILAPGSIPL
Trigger: GAGAGGAATGGAACCTGGAGCTAGAATTAATTGCCCACTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp GCATCCAGGGAGCGGATGGAATTCTTGAGCCAGATCTCCCCCGTGTaGGAATTGATGTCGAACACGTTGGCGGGCTCTGCATGGGTGATG +
Preference number: 1 (lower is better)
Translates to: ASRERMEFLSQISPV*ELMSNTLAGSAWVM
Trigger: CATCACCCATGCAGAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR GCA 90 bp GATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGGGCTCTaGATGGGTGATGGAATAGTCCACCAGGTTGTTGGGTTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: DLPRVGIDVEHVGGL*MGDGIVHQVVGFLC
Trigger: GCAGAGGAACCCAACAACCTGGTGGACTATTCCATCACCCATGCAGAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR GCA 90 bp TGCACCTCTAGGGACCATAGGCAGTCCCTTCCAGGTGTGATGTTGTaGAGGGCATCCAGGGAGCGGATGGAATTCTTGAGCCAGATCTCC +
Preference number: 1 (lower is better)
Translates to: CTSRDHRQSLPGVML*RASRERMEFLSQIS
Trigger: GGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACATCACACCTGGAAGGGACTGCCTATGGTCCCTAGAGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR GCA 90 bp ACTGTCTGTGGAACCACTCGGAAGATGCCCCTGGGTCCCACCAGCTaGAAGTTGAATTTGGCATTGGCTCCCTGGTCGGAGTCATTGACG +
Preference number: 1 (lower is better)
Translates to: TVCGTTRKMPLGPTS*KLNLALAPWSESLT
Trigger: CGTCAATGACTCCGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTCCACAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CCA 90 bp TCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTAGGGTGGGAGAGTaGGCAATTAATTCTAGCTCCAGGTTCCATTCCTCTCCATGCAGC +
Preference number: 1 (lower is better)
Translates to: SQFLPLPGCTGRVGE*AINSSSRFHSSPCS
Trigger: GCTGCATGGAGAGGAATGGAACCTGGAGCTAGAATTAATTGCCCACTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAGGAATTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp TGGAGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATaGCATCATCCAGTGGTAGCCCCTAAGCCCAGCACAGTGCCTGCT +
Preference number: 1 (lower is better)
Translates to: WSEGRTEVEVCESRQ*HHPVVAPKPSTVPA
Trigger: AGCAGGCACTGTGCTGGGCTTAGGGGCTACCACTGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp AGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTaGCCAGGGCCCTGCTGCTTGACTAAGGATGATGATGAGATCCCA +
Preference number: 1 (lower is better)
Translates to: SCRRQDPDSSQCCST*PGPCCLTKDDDEIP
Trigger: TGGGATCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp TCCCACGTGGGCATACCAGGGTCCACAGTCTCTGCCCAGACAGAATaGTCTATCTTTCCAAATGCATCCTGGCACAGTCCCACAGTCAGT +
Preference number: 1 (lower is better)
Translates to: SHVGIPGSTVSAQTE*SIFPNASWHSPTVS
Trigger: ACTGACTGTGGGACTGTGCCAGGATGCATTTGGAAAGATAGAGCATTCTGTCTGGGCAGAGACTGTGGACCCTGGTATGCCCACGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp CTCTTGGCAAGATCAATCTTCCACCTCTGTGTCCTCTGTCCCACGTaGGCATACCAGGGTCCACAGTCTCTGCCCAGACAGAATGCTCTA +
Preference number: 1 (lower is better)
Translates to: LLARSIFHLCVLCPT*AYQGPQSLPRQNAL
Trigger: TAGAGCATTCTGTCTGGGCAGAGACTGTGGACCCTGGTATGCCCACGTGGGACAGAGGACACAGAGGTGGAAGATTGATCTTGCCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp GGACAGCTCAAACCTGTTTTGGGGTCCGCTCTCTCCATAGAATGTTaGCGGGTGGTTGTTGAGGTCCACAATCCTGATGGTGACTGGGAC +
Preference number: 1 (lower is better)
Translates to: GQLKPVLGSALSIEC*RVVVEVHNPDGDWD
Trigger: GTCCCAGTCACCATCAGGATTGTGGACCTCAACAACCACCCGCCAACATTCTATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CCA 90 bp AGGATGTGCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTaGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATA +
Preference number: 1 (lower is better)
Translates to: RMCHCLSTDANTPGR*TGLGFPQRLQSLKI
Trigger: TATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGCACATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR GCA 90 bp GATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGGGCCCTGCTaGTTGACTAAGGATGATGATGAGATCCCAGTAGAACCTGAGGGA +
Preference number: 1 (lower is better)
Translates to: DPDSSQCCSTWPGPC*LTKDDDEIPVEPEG
Trigger: TCCCTCAGGTTCTACTGGGATCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTGACTAGAATCTGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp CAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGGGCCCTaGTGCTTGACTAAGGATGATGATGAGATCCCAGTAGAACCTGAG +
Preference number: 1 (lower is better)
Translates to: QDPDSSQCCSTWPGP*CLTKDDDEIPVEPE
Trigger: CTCAGGTTCTACTGGGATCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp CTAGTTGCCTTTAGGGCTACCTCTATAGCTCCAGCTTTGACATTTTaGGGCTCAGGGCAGTCCTGGCTGGAGACATCTGCCCTCACTCTT +
Preference number: 1 (lower is better)
Translates to: LVAFRATSIAPALTF*GSGQSWLETSALTL
Trigger: AAGAGTGAGGGCAGATGTCTCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTAGCCCTAAAGGCAACTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp AGGTTCCATTCCTCTCCATGCAGCCCTGCCTGGGCTTGTCCTGTTTaGGAGAAAAGTCCAGTAGACAAGGCCTGCAAATGTCCTGCTGTT +
Preference number: 1 (lower is better)
Translates to: RFHSSPCSPAWACPV*EKSPVDKACKCPAV
Trigger: AACAGCAGGACATTTGCAGGCCTTGTCTACTGGACTTTTCTCCCAAACAGGACAAGCCCAGGCAGGGCTGCATGGAGAGGAATGGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp GTTCTCCACAATGATTGTGACTTGGGCTTCATTCAGGACTGTCTGTaGAACCACTCGGAAGATGCCCCTGGGTCCCACCAGCTGCAAGTT +
Preference number: 1 (lower is better)
Translates to: VLHNDCDLGFIQDCL*NHSEDAPGSHQLQV
Trigger: AACTTGCAGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGTCACAATCATTGTGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CCA 90 bp CTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTaGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCGAA +
Preference number: 1 (lower is better)
Translates to: LPVNRCQHPWQVDWP*IPSTPSVPKNRITE
Trigger: TTCGGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR TCA 90 bp TTGACTAAGGATGATGATGAGATCCCAGTAGAACCTGAGGGACTGTaGGGTCTGGGATGGGTGAGCTGGCTTCTCGTCAATTCTCAGCCC +
Preference number: 1 (lower is better)
Translates to: LTKDDDEIPVEPEGL*GLGWVSWLLVNSQP
Trigger: GGGCTGAGAATTGACGAGAAGCCAGCTCACCCATCCCAGACCTCACAGTCCCTCAGGTTCTACTGGGATCTCATCATCATCCTTAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 90 bp ACGGAAGTCTCACCACATCTCAGCCCTGATATTCATCAACTGCCCTaGATTGTCTCTTCAAGGATGGCTGGTGGGGCAGCTCCTCAGAGA +
Preference number: 1 (lower is better)
Translates to: TEVSPHLSPDIHQLP*IVSSRMAGGAAPQR
Trigger: TCTCTGAGGAGCTGCCCCACCAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGATGAATATCAGGGCTGAGATGTGGTGAGACTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp GGTTGTCACAAGCTGATAAGGGCTGCCCTGGCTAGACAAGATCTTTaGTACCAACCTGCTGTGTGGCCTCAAGCAAAGCATTCCCTCCTT +
Preference number: 1 (lower is better)
Translates to: GCHKLIRAALARQDL*YQPAVWPQAKHSLL
Trigger: AAGGAGGGAATGCTTTGCTTGAGGCCACACAGCAGGTTGGTAGCAAAGATCTTGTCTAGCCAGGGCAGCCCTTATCAGCTTGTGACAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp GGAGAGTGGGCAATTAATTCTAGCTCCAGGTTCCATTCCTCTCCATaGAGCCCTGCCTGGGCTTGTCCTGTTTGGGAGAAAAGTCCAGTA +
Preference number: 1 (lower is better)
Translates to: GEWAINSSSRFHSSP*SPAWACPVWEKSPV
Trigger: TACTGGACTTTTCTCCCAAACAGGACAAGCCCAGGCAGGGCTGCATGGAGAGGAATGGAACCTGGAGCTAGAATTAATTGCCCACTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp ACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTaGCTGGAGACATCTGCCCTCACTCTTGGCAAGATCAATCTTCCA +
Preference number: 1 (lower is better)
Translates to: TSIAPALTFCGSGQS*LETSALTLGKINLP
Trigger: TGGAAGATTGATCTTGCCAAGAGTGAGGGCAGATGTCTCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp ATTAATTCTAGCTCCAGGTTCCATTCCTCTCCATGCAGCCCTGCCTaGGCTTGTCCTGTTTGGGAGAAAAGTCCAGTAGACAAGGCCTGC +
Preference number: 1 (lower is better)
Translates to: INSSSRFHSSPCSPA*ACPVWEKSPVDKAC
Trigger: GCAGGCCTTGTCTACTGGACTTTTCTCCCAAACAGGACAAGCCCAGGCAGGGCTGCATGGAGAGGAATGGAACCTGGAGCTAGAATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp TGTAGTAGTGCCAAGGATTTGAGTAACGGGGACGTATTTGCCAATTaGATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTAGAGCC +
Preference number: 1 (lower is better)
Translates to: CSSAKDLSNGDVFAN*ILEPNVLPKALTRA
Trigger: GGCTCTAGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAAATCCTTGGCACTACTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp CTTATTTGCTCAGTCTGGGCTCCTGGATTGCTCGAGTCCACCTCTTaGTTAATACTGTTCACGTTGGGGACTGTAGAAACCCCAGCAAGG +
Preference number: 1 (lower is better)
Translates to: LICSVWAPGLLESTS*LILFTLGTVETPAR
Trigger: CCTTGCTGGGGTTTCTACAGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp TGCTGGGGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTaGAAGAGCTGCACCCACAGAACTGGGCTGCAGAAAAATACTTTG +
Preference number: 1 (lower is better)
Translates to: CWGAWQSRCEAPNTF*KSCTHRTGLQKNTL
Trigger: CAAAGTATTTTTCTGCAGCCCAGTTCTGTGGGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCCCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp GAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTaGTTCTCTCTGACGGTAGCTGGCCAGGACGGTAGCGGGGATGGA +
Preference number: 1 (lower is better)
Translates to: ENSFSSSWQIKDLEL*FSLTVAGQDGSGDG
Trigger: TCCATCCCCGCTACCGTCCTGGCCAGCTACCGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp TCTGGAAGAGCTGCACCCACAGAACTGGGCTGCAGAAAAATACTTTaGATTCATGCCGCTTTGCACTTGGTTAAAGCCCTCATCACCACT +
Preference number: 1 (lower is better)
Translates to: SGRAAPTELGCRKIL*IHAALHLVKALITT
Trigger: AGTGGTGATGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCAGCCCAGTTCTGTGGGTGCAGCTCTTCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp GCCTGGGCTTGTCCTGTTTGGGAGAAAAGTCCAGTAGACAAGGCCTaGAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACA +
Preference number: 1 (lower is better)
Translates to: AWACPVWEKSPVDKA*KCPAVQDICMAIWT
Trigger: TGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGTCTACTGGACTTTTCTCCCAAACAGGACAAGCCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp CTGAAACACAGGCTGGAAAGTACTTATTTGCTCAGTCTGGGCTCCTaGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGG +
Preference number: 1 (lower is better)
Translates to: LKHRLESTYLLSLGS*IARVHLLLNTVHVG
Trigger: CCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAGTACTTTCCAGCCTGTGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 90 bp ACATGGTGTTCTAGTATGTGGGCCACAGTCACGGCAAGTGTCTACTaGGCTTGTGTAAGTAGATACAAAGCCGGTGCTAGGCACTTTACA +
Preference number: 1 (lower is better)
Translates to: TWCSSMWATVTASVY*ACVSRYKAGARHFT
Trigger: TGTAAAGTGCCTAGCACCGGCTTTGTATCTACTTACACAAGCTCAGTAGACACTTGCCGTGACTGTGGCCCACATACTAGAACACCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR GCA 90 bp GCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTaGACCCACAGAACTGGGCTGCAGAAAAATACTTTGCATTCATGC +
Preference number: 1 (lower is better)
Translates to: AWQSRCEAPNTFWKS*THRTGLQKNTLHSC
Trigger: GCATGAATGCAAAGTATTTTTCTGCAGCCCAGTTCTGTGGGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp TTTTCAAAGTCAATGGCAGCTGAGTTCTCCACAATGATTGTGACTTaGGCTTCATTCAGGACTGTCTGTGGAACCACTCGGAAGATGCCC +
Preference number: 1 (lower is better)
Translates to: FSKSMAAEFSTMIVT*ASFRTVCGTTRKMP
Trigger: GGGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGTCACAATCATTGTGGAGAACTCAGCTGCCATTGACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR TCA 90 bp GCAAAAGAGCTGGATAAAAACGGAAGTCTCACCACATCTCAGCCCTaGTATTCATCAACTGCCCTGAATTGTCTCTTCAAGGATGGCTGG +
Preference number: 1 (lower is better)
Translates to: AKELDKNGSLTTSQP*YSSTALNCLFKDGW
Trigger: CCAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGATGAATATCAGGGCTGAGATGTGGTGAGACTTCCGTTTTTATCCAGCTCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp AGATCTGAGCTCAGCCGCAGGAGGAAAATGACTCTGCAGAGTATTTaGTGTCACATCCATTTATTGTCCATGAGGCTACAGCTCCATTCT +
Preference number: 1 (lower is better)
Translates to: RSELSRRRKMTLQSI*CHIHLLSMRLQLHS
Trigger: AGAATGGAGCTGTAGCCTCATGGACAATAAATGGATGTGACACCAAATACTCTGCAGAGTCATTTTCCTCCTGCGGCTGAGCTCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR TCA 90 bp AGGATGATCAGCGACTTTAAACAGCTTTCCCAAGGTTACGCGATGTaGGCAAAAGAGCTGGATAAAAACGGAAGTCTCACCACATCTCAG +
Preference number: 1 (lower is better)
Translates to: RMISDFKQLSQGYAM*AKELDKNGSLTTSQ
Trigger: CTGAGATGTGGTGAGACTTCCGTTTTTATCCAGCTCTTTTGCTCACATCGCGTAACCTTGGGAAAGCTGTTTAAAGTCGCTGATCATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp GCCGGTGCTAGGCACTTTACATATATTAGATCTTTTCATCCTCTCTaGAACCATACTTTGCACCCTGTGTTAATGAGGAAAGTGAGGCCC +
Preference number: 1 (lower is better)
Translates to: AGARHFTYIRSFHPL*NHTLHPVLMRKVRP
Trigger: GGGCCTCACTTTCCTCATTAACACAGGGTGCAAAGTATGGTTGCAGAGAGGATGAAAAGATCTAATATATGTAAAGTGCCTAGCACCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR GCA 90 bp CCACAGAACTGGGCTGCAGAAAAATACTTTGCATTCATGCCGCTTTaGACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTC +
Preference number: 1 (lower is better)
Translates to: PQNWAAEKYFAFMPL*TWLKPSSPLFSSIL
Trigger: GAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCAGCCCAGTTCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 90 bp TGTCAAACTGTAAAGGACTTTGTTATTTCACGTGATTGGAAGATCTaGGCTCAGCCGCAGGAGGAAAATGACTCTGCAGAGTATTTGGTG +
Preference number: 1 (lower is better)
Translates to: CQTVKDFVISRDWKI*AQPQEENDSAEYLV
Trigger: CACCAAATACTCTGCAGAGTCATTTTCCTCCTGCGGCTGAGCTCAGATCTTCCAATCACGTGAAATAACAAAGTCCTTTACAGTTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CCA 90 bp ACTTTAAACAGCTTTCCCAAGGTTACGCGATGTGAGCAAAAGAGCTaGATAAAAACGGAAGTCTCACCACATCTCAGCCCTGATATTCAT +
Preference number: 1 (lower is better)
Translates to: TLNSFPKVTRCEQKS*IKTEVSPHLSPDIH
Trigger: ATGAATATCAGGGCTGAGATGTGGTGAGACTTCCGTTTTTATCCAGCTCTTTTGCTCACATCGCGTAACCTTGGGAAAGCTGTTTAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 90 bp AACTGGGCTGCAGAAAAATACTTTGCATTCATGCCGCTTTGCACTTaGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTA +
Preference number: 1 (lower is better)
Translates to: NWAAEKYFAFMPLCT*LKPSSPLFSSILTL
Trigger: TAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCAGCCCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 90 bp AATCACCAATGTATTCTAGAGGGGTTGTTAGTAAGTAGAGCCAAATaGAAAGAACTGTTCTACTTTTCTCTCTCTGTGCACACATGTAGA +
Preference number: 1 (lower is better)
Translates to: NHQCILEGLLVSRAK*KELFYFSLSVHTCR
Trigger: TCTACATGTGTGCACAGAGAGAGAAAAGTAGAACAGTTCTTTGCATTTGGCTCTACTTACTAACAACCCCTCTAGAATACATTGGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCGTCCGAGCAGCAGGGTaGTGGGGGTCAGGGGCGGAG +
Preference number: 2 (lower is better)
Translates to: CRLPATQATDAVASALSSVRAAG*WGSGAE
Trigger: CTCCGCCCCTGACCCCCACCACCCTGCTGCTCGGAC...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGGCCCAGCACAGTGCCTaGTGGGGCGCTTGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWAQHSA*WGAWQS
Trigger: ACTCTGCCAAGCGCCCCAGCAGGCACTGTGCTGGGC...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGTCCGAGCAGCAGGGTaGTGGGGGTCAGGGGCGGAG +
Preference number: 2 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQVRAAG*WGSGAE
Trigger: CTCCGCCCCTGACCCCCACCACCCTGCTGCTCGGAC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTGATCTTGAGGCCCCGCAGGATCTCTCCCTGGGGTGGGTGCTCATTCATGGACGGTGGCCTGGGCAGCTaGGCTCCCCGCAGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: VILRPRRISPWGGCSFMDGGLGS*APRRAH
Trigger: ATGAGCCCTGCGGGGAGCCCAGCTGCCCAGGCCACC...GTCCATGAATGAGCACCCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAACTGCCCTTGCCGGGCTaGACTGGTAGGGTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQLPLPG*TGRVGE
Trigger: CTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAG...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCCATGCAGCCCTGCCTaGGCTTGTCCTGTTTGGGAG +
Preference number: 2 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWPCSPA*ACPVWE
Trigger: CTCCCAAACAGGACAAGCCCAGGCAGGGCTGCATGG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp CAGGAAGGCAGCCATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATGTCAATGGGAGCCCCGGTCCTTaGCCTGCACCTCTAGGGACC +
Preference number: 2 (lower is better)
Translates to: QEGSHGAPGEGLSICDVNGSPGP*PAPLGT
Trigger: GGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCC...ATTGACATCACAGATGCTGAGACCCTCTCCCGGAGCCCCATGGCTGCCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR-3UTR TCA 90 bp TCAGGACTGTCTGTGGAACCACTCGGAAGATGCCCCTGGGTCCCACCAGCTGCAGGGCCGGGCTCTGAGTaGTGGAGATGGCTCCAGATG +
Preference number: 2 (lower is better)
Translates to: SGLSVEPLGRCPWVPPAAGPGSE*WRWLQM
Trigger: CATCTGGAGCCATCTCCATCACTCAGAGCCCGGCCC...TGCAGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTCCACAGACAGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR TCA 90 bp TGGGCAGCTGGGCTCCCCGCAGGGCTCATTTCAGTCACCTGTACATGCAGCTCAAGCTGGGCCGGGCTCTaGGTGATGGAGATGGCTCCA +
Preference number: 2 (lower is better)
Translates to: WAAGLPAGLISVTCTCSSSWAGL*VMEMAP
Trigger: TGGAGCCATCTCCATCACTCAGAGCCCGGCCCAGCT...TGAGCTGCATGTACAGGTGACTGAAATGAGCCCTGCGGGGAGCCCAGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR GCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGGATTCTAGTCAGTGTTaGTCCACGTGGCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWDSSQC*STWPGP
Trigger: GGGCCCTGGCCACGTGGAGCAACACTGACTAGAATC...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACTGCCCTTGCCGGGCTaGACTGGTAGGGTGGGAGAG +
Preference number: 2 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPLPLPG*TGRVGE
Trigger: CTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGAATGGATCCACCTGCTaGAGCAGCCAGGAGGCAAGT +
Preference number: 2 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWNGSTC*SSQEAS
Trigger: ACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATT...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTTCCATTCCTCTCCATaGAGCCCTGCCTGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWFHSSP*SPAWAC
Trigger: ACAAGCCCAGGCAGGGCTGCATGGAGAGGAATGGAA...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp CGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCCTaGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCC +
Preference number: 2 (lower is better)
Translates to: RALPHPWPVCKIGSA*VQVPGVVQETTLGP
Trigger: GGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGATCCCAGTAGAACCTaGGGGACTGTGAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQDPSRT*GTVRSG
Trigger: CCCAGACCTCACAGTCCCTCAGGTTCTACTGGGATC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGGTCCTCTGTCCCACGTaGGCATACCAGGGTCCACAG +
Preference number: 2 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRVLCPT*AYQGPQ
Trigger: CTGTGGACCCTGGTATGCCCACGTGGGACAGAGGAC...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp AGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTaGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGACGCCTGTC +
Preference number: 2 (lower is better)
Translates to: SSWGCPRDHPRSRIH*QAQASSLEVFRTPV
Trigger: GACAGGCGTCCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp GCGGGGTCTCCTCCAGTGCTGACAACACTTGCCGGTGCCTTAAGTTaGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCT +
Preference number: 2 (lower is better)
Translates to: AGSPPVLTTLAGALS*AAPSSSFLVWLMLA
Trigger: AGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACTGGAGGAGACCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTCTAAGCCCAGCACAGTaGCTGCTGGGGCGCTTGGCA +
Preference number: 2 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPLSPAQ*LLGRLA
Trigger: TGCCAAGCGCCCCAGCAGGCACTGTGCTGGGCTTAG...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAATCTGGGCTCCTGGATTaGTCGAGTCCACCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQSGLLD*SSPPLA
Trigger: AGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGA...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTCAAGCCTGCCCAGTGTaGCATTCCTGCCTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPQACPV*HSCLPA
Trigger: AGCTGGGAGGCAGGAATGGCACACTGGGCAGGCTTG...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACTCTTCAAGGATGGCTaGTGGGGCAGCTCCTCAGAG +
Preference number: 2 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPLFKDG*WGSSSE
Trigger: CTCTGAGGAGCTGCCCCACCAGCCATCCTTGAAGAG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp TCAGGACTGTCTGTGGAACCACTCGGAAGATGCCCCTGGGTCCCACCAGCTGCAGATCTCTCCCTGGGGTaGGTGCTCATTCATGGACAG +
Preference number: 2 (lower is better)
Translates to: SGLSVEPLGRCPWVPPAADLSLG*VLIHGQ
Trigger: CTGTCCATGAATGAGCACCCACCCCAGGGAGAGATC...TGCAGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTCCACAGACAGTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CAA 90 bp GCCTGCACCTCTAGGGACCATAGGCAGTCCCTTCCAGGTGTGATGTaGTGCAGGGCATCCAGGGAGCGGATGGAATTCTTGAGCCAGATC +
Preference number: 2 (lower is better)
Translates to: ACTSRDHRQSLPGVM*CRASRERMEFLSQI
Trigger: GATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACATCACACCTGGAAGGGACTGCCTATGGTCCCTAGAGGTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR-3UTR TCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCCAGGGCCCTGCTGCTTaGCTAAGGATGATGATGAGA +
Preference number: 2 (lower is better)
Translates to: AFLQPTRFADLQPETVLSQGPAA*LRMMMR
Trigger: TCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTG...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGAATGGATCCACCTGCTaGAGCAGCCAGGAGGCAAGT +
Preference number: 2 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRNGSTC*SSQEAS
Trigger: ACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATT...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp ATGTTGTGCAGGGCATCCAGGGAGCGGATGGAATTCTTGAGCCAGATCTCCCCCCGGGCTCTGCATGGGTaGTGGAATAGTCCACCAGGT +
Preference number: 2 (lower is better)
Translates to: MLCRASRERMEFLSQISPRALHG*WNSPPG
Trigger: ACCTGGTGGACTATTCCATCACCCATGCAGAGCCCG...GGGGGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR-3UTR TCA 90 bp TGTATCAGGAAGGCAGCCATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATGAGCGGATGGAATTCTTaGGCCAGATCTCCCCCGTGT +
Preference number: 2 (lower is better)
Translates to: CIRKAAMGLRERVSASVMSGWNS*ARSPPC
Trigger: ACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCT...CATCACAGATGCTGAGACCCTCTCCCGGAGCCCCATGGCTGCCTTCCTGATACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR-3UTR TCA 90 bp CTGTATCAGGAAGGCAGCCATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATAGTCCCTTCCAGGTGTaGTGTTGTGCAGGGCATCCA +
Preference number: 2 (lower is better)
Translates to: LYQEGSHGAPGEGLSICDSPFQV*CCAGHP
Trigger: TGGATGCCCTGCACAACATCACACCTGGAAGGGACT...ATCACAGATGCTGAGACCCTCTCCCGGAGCCCCATGGCTGCCTTCCTGATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR-3UTR GCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACACTTTCTGGAAGAGCTaGACCCACAGAACTGGGCTG +
Preference number: 2 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHTFWKS*THRTGL
Trigger: CAGCCCAGTTCTGTGGGTGCAGCTCTTCCAGAAAGT...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGAAAGACTTGGAGCTCTaGTTCTCTCTGACGGTAGCT +
Preference number: 2 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWKDLEL*FSLTVA
Trigger: AGCTACCGTCAGAGAGAACCAGAGCTCCAAGTCTTT...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGCTGGGGGTCGAAGAATaGATCCACCTGCTGAAGCAG +
Preference number: 2 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRLGVEE*IHLLKQ
Trigger: CTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAG...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp ATTCATGGACAGCTCAAACCTGTTTTGGGGTCCGCTCTCTCCATAGAATGTTGGACTGGGACGGTGGCCTaGGCAGCTGGGCTCCCCGCA +
Preference number: 2 (lower is better)
Translates to: IHGQLKPVLGSALSIECWTGTVA*AAGLPA
Trigger: TGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGT...CCAACATTCTATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTGTCCATGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CAA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATaGGCTCTGCCTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCA +
Preference number: 2 (lower is better)
Translates to: MLATGHFPIHGQFAR*ALPWSKFLGLSKRP
Trigger: TGGTCTCTTGGACAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp TTGAATTTGGCATTGGCTCCCTGGTCGGAGTCATTGACGGTGATCTaGAGGCCCCGCAGGATCTCTCCCTGGGGTGGGTGCTCATTCATG +
Preference number: 2 (lower is better)
Translates to: LNLALAPWSESLTVI*RPRRISPWGGCSFM
Trigger: CATGAATGAGCACCCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGACTCCGACCAGGGAGCCAATGCCAAATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR TCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGATCTTGCCCAAGGCCCTaGCTAGAGCCCTGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGSCPRP*LEPCQS
Trigger: GCTCTGACAGGGCTCTAGTCAGGGCCTTGGGCAAGA...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGGAGGTCTGGGATGGGTaGGCTGGCTTCTCGTCAATT +
Preference number: 2 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEEVWDG*AGFSSI
Trigger: AATTGACGAGAAGCCAGCTCACCCATCCCAGACCTC...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAGAACCTGAGGGACTGTaGGGTCTGGGATGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGEPEGL*GLGWVS
Trigger: GCTCACCCATCCCAGACCTCACAGTCCCTCAGGTTC...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGTTTAGGACGCCTGTCTaGGAGACGACAGTGCTTCCC +
Preference number: 2 (lower is better)
Translates to: MLATGHFPIHGQFARLALFRTPV*ETTVLP
Trigger: GGGAAGCACTGTCGTCTCTCAGACAGGCGTCCTAAA...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGGCTCCTGCTCTCAGCTaGAGGCGTCAGGATCCAGAT +
Preference number: 2 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQAPALS*RRQDPD
Trigger: ATCTGGATCCTGACGCCTGCAGCTGAGAGCAGGAGC...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAACCCCTTACCTACATTTaGTTTCCTACAGCCCACGAG +
Preference number: 2 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQPLTYI*FPTAHE
Trigger: CTCGTGGGCTGTAGGAAAGCAAATGTAGGTAAGGGG...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATAGGGTCCACAGTCTCTaGCCAGACAGAATGCTCTAT +
Preference number: 2 (lower is better)
Translates to: ATACQQMPTPLAGGLALDRVHSL*PDRMLY
Trigger: ATAGAGCATTCTGTCTGGGCAGAGACTGTGGACCCT...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTCCAGCTTTGACATTTTaGGGCTCAGGGCAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPPALTF*GSGQSW
Trigger: CCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGG...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR GCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCATGTGAGTCACGGCAATaGCATCATCCAGTGGTAGCC +
Preference number: 2 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPCESRQ*HHPVVA
Trigger: GGCTACCACTGGATGATGGCATTGCCGTGACTCACA...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGTCTGGGCTCCTGGATTaGTCGAGTCCACCTCTTGCT +
Preference number: 2 (lower is better)
Translates to: SGGRRMDPPAEAARRQVESGLLD*SSPPLA
Trigger: AGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGA...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTCTCTCCATGCAGCCCTaGCTGGGCTTGTCCTGTTTG +
Preference number: 2 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPLSMQP*LGLSCL
Trigger: CAAACAGGACAAGCCCAGGCAGGGCTGCATGGAGAG...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp ATGTTGTGCAGGGCATCCAGGGAGCGGATGGAATTCTTGAGCCAGATCTCCCCCCACGTTGGCGGGCTCTaGATGGGTGATGGAATAGTC +
Preference number: 2 (lower is better)
Translates to: MLCRASRERMEFLSQISPHVGGL*MGDGIV
Trigger: GACTATTCCATCACCCATGCAGAGCCCGCCAACGTG...GGGGGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTTTCAAGGATGGCTGGTaGGGCAGCTCCTCAGAGAGC +
Preference number: 2 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPFKDGW*GSSSES
Trigger: GCTCTCTGAGGAGCTGCCCCACCAGCCATCCTTGAA...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp CATGGACAGCTCAAACCTGTTTTGGGGTCCGCTCTCTCCATAGAATGTTGGCGGAATCCTGATGGTGACTaGGACGGTGGCCTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: HGQLKPVLGSALSIECWRNPDGD*DGGLGS
Trigger: GCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATT...CCGCCAACATTCTATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CAA 90 bp CCAGGTGTGATGTTGTGCAGGGCATCCAGGGAGCGGATGGAATTCTaGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTG +
Preference number: 2 (lower is better)
Translates to: PGVMLCRASRERMEF*SQISPVWELMSNTL
Trigger: CAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACATCACACCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR-3UTR TCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGCAGGGCCCTGCTGCTTaGCTAAGGATGATGATGAGA +
Preference number: 2 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEQGPAA*LRMMMR
Trigger: TCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTG...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCGATTCTAGTCAGTGTTaGTCCACGTGGCCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATDSSQC*STWPGP
Trigger: GGGCCCTGGCCACGTGGAGCAACACTGACTAGAATC...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTTCCTTTTCCTGCTCCTaGTCTCAGCTGCAGGCGTCA +
Preference number: 2 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPSFSCS*SQLQAS
Trigger: TGACGCCTGCAGCTGAGAGCAGGAGCAGGAAAAGGA...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAACTCTATCTTTCCAAATaGATCCTGGCACAGTCCCAC +
Preference number: 2 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQLYLSK*ILAQSH
Trigger: GTGGGACTGTGCCAGGATGCATTTGGAAAGATAGAG...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGTGTGAGTCACGGCAATaGCATCATCCAGTGGTAGCC +
Preference number: 2 (lower is better)
Translates to: SGGRRMDPPAEAARRQVECESRQ*HHPVVA
Trigger: GGCTACCACTGGATGATGGCATTGCCGTGACTCACA...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTGTCCTCTGTCCCACGTaGGCATACCAGGGTCCACAG +
Preference number: 2 (lower is better)
Translates to: APGLLESTSCLILFTLGTVLCPT*AYQGPQ
Trigger: CTGTGGACCCTGGTATGCCCACGTGGGACAGAGGAC...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTTTGTCTCTTCAAGGATaGCTGGTGGGGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPLSLQG*LVGQLL
Trigger: GAGGAGCTGCCCCACCAGCCATCCTTGAAGAGACAA...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGGGTAGGGTGGGAGAGTaGGCAATTAATTCTAGCTCC +
Preference number: 2 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRGRVGE*AINSSS
Trigger: GGAGCTAGAATTAATTGCCCACTCTCCCACCCTACC...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp ATTGGCTCCCTGGTCGGAGTCATTGACGGTGATCTTGAGGCCCCGCAGGATCTCCTCTCCATAGAATGTTaGCGGGTGGTTGTTGAGGTC +
Preference number: 2 (lower is better)
Translates to: IGSLVGVIDGDLEAPQDLLSIEC*RVVVEV
Trigger: GACCTCAACAACCACCCGCCAACATTCTATGGAGAG...GAGATCCTGCGGGGCCTCAAGATCACCGTCAATGACTCCGACCAGGGAGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CAA 90 bp CCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGGGCCCTGCTGCTaGACTAAGGATGATGATGAGATCCCAGTAGAACCTGAGGGACTG +
Preference number: 2 (lower is better)
Translates to: PDSSQCCSTWPGPCC*TKDDDEIPVEPEGL
Trigger: CAGTCCCTCAGGTTCTACTGGGATCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTGACTAGAATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp CAGGTTCCATTCCTCTCCATGCAGCCCTGCCTGGGCTTGTCCTGTTaGGGAGAAAAGTCCAGTAGACAAGGCCTGCAAATGTCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: QVPFLSMQPCLGLSC*GEKSSRQGLQMSCC
Trigger: ACAGCAGGACATTTGCAGGCCTTGTCTACTGGACTTTTCTCCCAAACAGGACAAGCCCAGGCAGGGCTGCATGGAGAGGAATGGAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp CGCCTCATTCTGGAAACTAGGCCCTTCAGAGAACCCCTCCCTAGGTaGTTTGTGAGTTTCCTAAGGGGTCCTCCATGTGGCACATGCCAG +
Preference number: 2 (lower is better)
Translates to: RLILETRPFREPLPR*FVSFLRGPPCGTCQ
Trigger: CTGGCATGTGCCACATGGAGGACCCCTTAGGAAACTCACAAACAACCTAGGGAGGGGTTCTCTGAAGGGCCTAGTTTCCAGAATGAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCACGTGGCCAGGGCCCTaGTGCTTGACTAAGGATGAT +
Preference number: 2 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAATWPGP*CLTKDD
Trigger: ATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGT...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCCCAGCTTTGACATTTTaGGGCTCAGGGCAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTPALTF*GSGQSW
Trigger: CCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGG...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCTTGTCTCTTCAAGGATaGCTGGTGGGGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATLSLQG*LVGQLL
Trigger: GAGGAGCTGCCCCACCAGCCATCCTTGAAGAGACAA...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCGCCTGCTGGGGCGCTTaGCAGAGTAGATGTGAGGCT +
Preference number: 2 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITACWGA*QSRCEA
Trigger: AGCCTCACATCTACTCTGCCAAGCGCCCCAGCAGGC...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCTTATTTGCTCAGTCTaGGCTCCTGGATTGCTCGAG +
Preference number: 2 (lower is better)
Translates to: MLATGHFPIHGQFARLALLICSV*APGLLE
Trigger: CTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAG...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGATGCTGTATTCCCTGTaGAGGGCAAGCATGATCCAG +
Preference number: 2 (lower is better)
Translates to: MLATGHFPIHGQFARLALMLYSL*RASMIQ
Trigger: CTGGATCATGCTTGCCCTCCACAGGGAATACAGCAT...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp AGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTaGCCCAAGGCCCTGACTAGAGCCCTGTCAGAGCGCAACTTCTTG +
Preference number: 2 (lower is better)
Translates to: SNGDVFANCILEPNV*PKALTRALSERNFL
Trigger: CAAGAAGTTGCGCTCTGACAGGGCTCTAGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAGATCCCAGTAGAACCTaGGGGACTGTGAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPDPSRT*GTVRSG
Trigger: CCCAGACCTCACAGTCCCTCAGGTTCTACTGGGATC...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCCTCAGAGAGCAGCCCTaGTGCTCTTCTAGTTGCCTT +
Preference number: 2 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTLREQP*CSSSCL
Trigger: AAGGCAACTAGAAGAGCATCAGGGCTGCTCTCTGAG...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCTCAGAGAGCAGCCCTaGTGCTCTTCTAGTTGCCTT +
Preference number: 2 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAALREQP*CSSSCL
Trigger: AAGGCAACTAGAAGAGCATCAGGGCTGCTCTCTGAG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATCCCACAGAACTGGGCTaGAGAAAAATACTTTGCATT +
Preference number: 2 (lower is better)
Translates to: ATACQQMPTPLAGGLALDPTELG*RKILCI
Trigger: AATGCAAAGTATTTTTCTGCAGCCCAGTTCTGTGGG...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCGGAGGCCTACCATGGTaGCAGCCTGGAGCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVGGLPW*QPGALP
Trigger: AGGCAGAGCTCCAGGCTGGCACCATGGTAGGCCTCC...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAGGGGCGGAGGAAAGATaGGGGGTCATAGGGCATACA +
Preference number: 2 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPGAEER*GVIGHT
Trigger: TGTATGCCCTATGACCCCCCATCTTTCCTCCGCCCC...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGATCTGCCCTCACTCTTaGCAAGATCAATCTTCCACC +
Preference number: 2 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEICPHS*QDQSST
Trigger: GGTGGAAGATTGATCTTGCCAAGAGTGAGGGCAGAT...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp AGTCAGTGTGTTTTCTGTGCATCCTTGCTCTCCCCTTACCTACATTaGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: SQCVFCASLLSPYLH*LSYSPRGSLTSSLR
Trigger: TCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAGGTAAGGGGAGAGCAAGGATGCACAGAAAACACACTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp AAGTCTCACCACATCTCAGCCCTGATATTCATCAACTGCCCTGAATaGTCTCTTCAAGGATGGCTGGTGGGGCAGCTCCTCAGAGAGCAG +
Preference number: 2 (lower is better)
Translates to: KSHHISALIFINCPE*SLQGWLVGQLLREQ
Trigger: CTGCTCTCTGAGGAGCTGCCCCACCAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGATGAATATCAGGGCTGAGATGTGGTGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGTCAATTCTCAGCCCTaGAGAATGGAGGGCATTGTA +
Preference number: 2 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPVNSQP*RMEGIV
Trigger: TACAATGCCCTCCATTCTTCAGGGCTGAGAATTGAC...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCAGAAGTAGAGGTGTGTaGGTCACGGCAATGCCATCA +
Preference number: 2 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAARSRGV*VTAMPS
Trigger: TGATGGCATTGCCGTGACTCACACACCTCTACTTCT...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGGGGATTATACCATTGTaGAAAACAGGGGTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: MLATGHFPIHGQFARLALGIIPL*KTGVSD
Trigger: GTCACTGACCCCTGTTTTGCACAATGGTATAATCCC...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAACGTGGCCAGGGCCCTaGTGCTTGACTAAGGATGAT +
Preference number: 2 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPTWPGP*CLTKDD
Trigger: ATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGT...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCCCCCTTACCTACATTTaGTTTCCTACAGCCCACGAG +
Preference number: 2 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATPLTYI*FPTAHE
Trigger: CTCGTGGGCTGTAGGAAAGCAAATGTAGGTAAGGGG...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTCTGGCTGGAGACATCTaGCCTCACTCTTGGCAAGAT +
Preference number: 2 (lower is better)
Translates to: APGLLESTSCLILFTLGTLAGDI*PHSWQD
Trigger: ATCTTGCCAAGAGTGAGGGCAGATGTCTCCAGCCAG...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACAGTGTTGCTCCACGTaGCCAGGGCCCTGCTGCTTG +
Preference number: 2 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKQCCST*PGPCCL
Trigger: CAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTG...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTGTGAGCAAAAGAGCTaGATAAAAACGGAAGTCTCA +
Preference number: 2 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHCEQKS*IKTEVS
Trigger: TGAGACTTCCGTTTTTATCCAGCTCTTTTGCTCACA...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTAAAGACTTGGAGCTCTaGTTCTCTCTGACGGTAGCT +
Preference number: 2 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPKDLEL*FSLTVA
Trigger: AGCTACCGTCAGAGAGAACCAGAGCTCCAAGTCTTT...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCTTCTGGACCTACAGGTaGGTGGAAACATCCTGGGGG +
Preference number: 2 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITFWTYR*VETSWG
Trigger: CCCCCAGGATGTTTCCACCCACCTGTAGGTCCAGAA...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 90 bp ATCCAGCACAGTCCTCTCCTGAAACACAGGCTGGAAAGTACTTATTaGCTCAGTCTGGGCTCCTGGATTGCTCGAGTCCACCTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: IQHSPLLKHRLESTY*LSLGSWIARVHLLL
Trigger: AAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAGTACTTTCCAGCCTGTGTTTCAGGAGAGGACTGTGCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCGTCAATTCTCAGCCCTaGAGAATGGAGGGCATTGTA +
Preference number: 2 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTVNSQP*RMEGIV
Trigger: TACAATGCCCTCCATTCTTCAGGGCTGAGAATTGAC...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp CTCCACAATGATTGTGACTTGGGCTTCATTCAGGACTGTCTGTGGAACCACTCGCCACCAGCTGCAAGTTaGATTTGGCATTGGCTCCCT +
Preference number: 2 (lower is better)
Translates to: LHNDCDLGFIQDCLWNHSPPAAS*IWHWLP
Trigger: AGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGG...CGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGTCACAATCATTGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR GCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGTCTGCCCAGACAGAATaGTCTATCTTTCCAAATGCA +
Preference number: 2 (lower is better)
Translates to: MLATGHFPIHGQFARLALSAQTE*SIFPNA
Trigger: TGCATTTGGAAAGATAGAGCATTCTGTCTGGGCAGA...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCGCCCAGCACAGTGCCTaGTGGGGCGCTTGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFAQHSA*WGAWQS
Trigger: ACTCTGCCAAGCGCCCCAGCAGGCACTGTGCTGGGC...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAACTTTTCTCTCTCTGTaGACACATGTAGATTTCCTG +
Preference number: 2 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPTFLSL*THVDFL
Trigger: CAGGAAATCTACATGTGTGCACAGAGAGAGAAAAGT...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGACTTTTCTCTCTCTGTaGACACATGTAGATTTCCTG +
Preference number: 2 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRTFLSL*THVDFL
Trigger: CAGGAAATCTACATGTGTGCACAGAGAGAGAAAAGT...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GTGGGTGCTCATTCATGGACAGCTCAAACCTGTTTTGGGGTCCGCTCTCTCCATTCAGTCACCTGTACATaGAGCTCATACACCTCTCTC +
Preference number: 2 (lower is better)
Translates to: VGAHSWTAQTCFGVRSLHSVTCT*SSYTSL
Trigger: GAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGA...ATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTGTCCATGAATGAGCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGGATCAGCATGGCCTTTaGGTAACAGACTTTATTTTC +
Preference number: 2 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRDQHGL*VTDFIF
Trigger: GAAAATAAAGTCTGTTACCCAAAGGCCATGCTGATC...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCAGATTGGCTCTGCCTTaGTCCAAGTTCCTGGGGTTG +
Preference number: 2 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITRLALP*SKFLGL
Trigger: CAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCT...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 90 bp ACTTATTTGCTCAGTCTGGGCTCCTGGATTGCTCGAGTCCACCTCTaGCTTAATACTGTTCACGTTGGGGACTGTAGAAACCCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: TYLLSLGSWIARVHL*LNTVHVGDCRNPSK
Trigger: CTTGCTGGGGTTTCTACAGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCGACGTATTTGCCAATTaGATCCTAGAGCCCAATGTC +
Preference number: 2 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAADVFAN*ILEPNV
Trigger: GACATTGGGCTCTAGGATGCAATTGGCAAATACGTC...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACTGATATTCATCAACTaGCCTGAATTGTCTCTTCAA +
Preference number: 2 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPLIFIN*PELSLQ
Trigger: TTGAAGAGACAATTCAGGGCAGTTGATGAATATCAG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATGTAAGTAGAGCCAAATaGAAAGAACTGTTCTACTTT +
Preference number: 2 (lower is better)
Translates to: ATACQQMPTPLAGGLALDVSRAK*KELFYF
Trigger: AAAGTAGAACAGTTCTTTGCATTTGGCTCTACTTAC...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR GCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCTTGCAAGATTGGCTCTaGCTTGGTCCAAGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITLQDWL*LGPSSW
Trigger: CCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAA...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACTCAGTCTGGGCTCCTaGATTGCTCGAGTCCACCTC +
Preference number: 2 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKLSLGS*IARVHL
Trigger: GAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAG...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp AACACAGGCTGGAAAGTACTTATTTGCTCAGTCTGGGCTCCTGGATaGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACT +
Preference number: 2 (lower is better)
Translates to: NTGWKVLICSVWAPG*LESTSCLILFTLGT
Trigger: AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAGTACTTTCCAGCCTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTCTTGCCCAAGGCCCTaGCTAGAGCCCTGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFSCPRP*LEPCQS
Trigger: GCTCTGACAGGGCTCTAGTCAGGGCCTTGGGCAAGA...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAGAGGTCTGGGATGGGTaGGCTGGCTTCTCGTCAATT +
Preference number: 2 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKEVWDG*AGFSSI
Trigger: AATTGACGAGAAGCCAGCTCACCCATCCCAGACCTC...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTGGGATTATACCATTGTaGAAAACAGGGGTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: APGLLESTSCLILFTLGTGIIPL*KTGVSD
Trigger: GTCACTGACCCCTGTTTTGCACAATGGTATAATCCC...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGGCCTGCTGGGGCGCTTaGCAGAGTAGATGTGAGGCT +
Preference number: 2 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTACWGA*QSRCEA
Trigger: AGCCTCACATCTACTCTGCCAAGCGCCCCAGCAGGC...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCAGCACAGTGCCTGCTaGGGCGCTTGGCAGAGTAGA +
Preference number: 2 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFQHSAC*GAWQSR
Trigger: TCTACTCTGCCAAGCGCCCCAGCAGGCACTGTGCTG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp TTCTCAGCCCTGAAGAATGGAGGGCATTGTAGTAGTGCCAAGGATTaGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAAT +
Preference number: 2 (lower is better)
Translates to: FSALKNGGHCSSAKD*SNGDVFANCILEPN
Trigger: ATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAAATCCTTGGCACTACTACAATGCCCTCCATTCTTCAGGGCTGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGAAAGCATTCCCTCCTTaGGAACTCATTTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVKAFPP*ELIFFI
Trigger: GATGAAGAAAATGAGTTCTCAAGGAGGGAATGCTTT...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCAAAGCATTCCCTCCTTaGGAACTCATTTTCTTCATC +
Preference number: 2 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATKAFPP*ELIFFI
Trigger: GATGAAGAAAATGAGTTCTCAAGGAGGGAATGCTTT...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAGACGTATTTGCCAATTaGATCCTAGAGCCCAATGTC +
Preference number: 2 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPDVFAN*ILEPNV
Trigger: GACATTGGGCTCTAGGATGCAATTGGCAAATACGTC...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGTGCAGAAAAATACTTTaGATTCATGCCGCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVCRKIL*IHAALH
Trigger: GTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCA...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCGGGGCGGAGGAAAGATaGGGGGTCATAGGGCATACA +
Preference number: 2 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFGAEER*GVIGHT
Trigger: TGTATGCCCTATGACCCCCCATCTTTCCTCCGCCCC...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp TTCCTTAAAGCAGGGCACAACCTATTTGTATTAACCCCAGAGGCCTaGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGG +
Preference number: 2 (lower is better)
Translates to: FLKAGHNLFVLTPEA*YDFCPGEGCHKLIR
Trigger: CCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGCCTCTGGGGTTAATACAAATAGGTTGTGCCCTGCTTTAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR TCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCGTAGTGCCAAGGATTTaGGTAACGGGGACGTATTTG +
Preference number: 2 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVVVPRI*VTGTYL
Trigger: CAAATACGTCCCCGTTACTCAAATCCTTGGCACTAC...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR GCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTAGGGTCCACAGTCTCTaGCCAGACAGAATGCTCTAT +
Preference number: 2 (lower is better)
Translates to: HLVKALITTIFFNPHPRPRVHSL*PDRMLY
Trigger: ATAGAGCATTCTGTCTGGGCAGAGACTGTGGACCCT...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp TACTTTGCACCCTGTGTTAATGAGGAAAGTGAGGCCCAGAGAGACTaGACCTCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTC +
Preference number: 2 (lower is better)
Translates to: YFAPCVNEESEAQRD*TSCPKSQLMAEPEF
Trigger: GAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGAGGTCAAGTCTCTCTGGGCCTCACTTTCCTCATTAACACAGGGTGCAAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR TCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGAGAACCTGAGGGACTGTaGGGTCTGGGATGGGTGAGC +
Preference number: 2 (lower is better)
Translates to: LFKISAWQFGQKFSAFFREPEGL*GLGWVS
Trigger: GCTCACCCATCCCAGACCTCACAGTCCCTCAGGTTC...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTGCTCCTGCTCTCAGCTaGAGGCGTCAGGATCCAGAT +
Preference number: 2 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSAPALS*RRQDPD
Trigger: ATCTGGATCCTGACGCCTGCAGCTGAGAGCAGGAGC...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCTGGGATGGGTGAGCTaGCTTCTCGTCAATTCTCAG +
Preference number: 2 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFLGWVS*LLVNSQ
Trigger: CTGAGAATTGACGAGAAGCCAGCTCACCCATCCCAG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTTTCAAGGATGGCTGGTaGGGCAGCTCCTCAGAGAGC +
Preference number: 2 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSFKDGW*GSSSES
Trigger: GCTCTCTGAGGAGCTGCCCCACCAGCCATCCTTGAA...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp GAACTGGGCTGCAGAAAAATACTTTGCATTCATGCCGCTTTGCACTaGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCT +
Preference number: 2 (lower is better)
Translates to: ELGCRKILCIHAALH*VKALITTIFFNPHP
Trigger: AGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCAGCCCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp CCCACAGAACTGGGCTGCAGAAAAATACTTTGCATTCATGCCGCTTaGCACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCT +
Preference number: 2 (lower is better)
Translates to: PTELGCRKILCIHAA*HLVKALITTIFFNP
Trigger: AGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCAGCCCAGTTCTGTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 90 bp TTTGCTACCAACCTGCTGTGTGGCCTCAAGCAAAGCATTCCCTCCTaGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGC +
Preference number: 2 (lower is better)
Translates to: FATNLLCGLKQSIPS*RTHFLHLGKLKTWS
Trigger: GCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAAGGAGGGAATGCTTTGCTTGAGGCCACACAGCAGGTTGGTAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCTCTGCCCAGACAGAATaGTCTATCTTTCCAAATGCA +
Preference number: 2 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVSAQTE*SIFPNA
Trigger: TGCATTTGGAAAGATAGAGCATTCTGTCTGGGCAGA...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR GCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAACTCGAGTCCACCTCTTaGTTAATACTGTTCACGTTG +
Preference number: 2 (lower is better)
Translates to: TRPANVLLFKISAWQFGQLESTS*LILFTL
Trigger: CAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAG...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCTTATTTGCTCAGTCTaGGCTCCTGGATTGCTCGAG +
Preference number: 2 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFLICSV*APGLLE
Trigger: CTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTTGGCCAGGGCCCTGCTaGTTGACTAAGGATGATGAT +
Preference number: 2 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSWPGPC*LTKDDD
Trigger: ATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCA...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTGGCTGGAGACATCTaGCCTCACTCTTGGCAAGAT +
Preference number: 2 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSLAGDI*PHSWQD
Trigger: ATCTTGCCAAGAGTGAGGGCAGATGTCTCCAGCCAG...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTCCAAATGCATCCTaGCACAGTCCCACAGTCAGT +
Preference number: 2 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFFPNAS*HSPTVS
Trigger: ACTGACTGTGGGACTGTGCCAGGATGCATTTGGAAA...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAATGCAGAAAAATACTTTaGATTCATGCCGCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: TRPANVLLFKISAWQFGQCRKIL*IHAALH
Trigger: GTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCA...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCTCGAGTCCACCTCTTaGTTAATACTGTTCACGTTG +
Preference number: 2 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFLESTS*LILFTL
Trigger: CAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTTTTCCAAATGCATCCTaGCACAGTCCCACAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSFPNAS*HSPTVS
Trigger: ACTGACTGTGGGACTGTGCCAGGATGCATTTGGAAA...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGAGATCAGCATGGCCTTTaGGTAACAGACTTTATTTTC +
Preference number: 2 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRDQHGL*VTDFIF
Trigger: GAAAATAAAGTCTGTTACCCAAAGGCCATGCTGATC...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR GCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGAGTAAGTAGAGCCAAATaGAAAGAACTGTTCTACTTT +
Preference number: 2 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRVSRAK*KELFYF
Trigger: AAAGTAGAACAGTTCTTTGCATTTGGCTCTACTTAC...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp CGGGTGGTTGTTGAGGTCCACAATCCTGATGGTGACTaGGACGGTGGCCTGGGCAGCTGGGCTCCCCGCAGG +
Preference number: 3 (lower is better)
Translates to: RVVVEVHNPDGD*DGGLGSWAPRR
Trigger: CCTGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATTGTGGACCTCAACAACCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR GCA 72 bp GTGGTGCTGAAGGATGGGGAGCCCCGGTCCTTGGCCTaGACCTCTAGGGACCATAGGCAGTCCCTTCCAGGT +
Preference number: 3 (lower is better)
Translates to: VVLKDGEPRSLA*TSRDHRQSLPG
Trigger: ACCTGGAAGGGACTGCCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCCATCCTTCAGCACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR CCA 72 bp AGGTCCACAATCCTGATGGTGACTGGGACGGTGGCCTaGGCAGCTGGGCTCCCCGCAGGGCTCATTTCAGTC +
Preference number: 3 (lower is better)
Translates to: RSTILMVTGTVA*AAGLPAGLISV
Trigger: GACTGAAATGAGCCCTGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATTGTGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR CAA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCGTCTGGGCTCCTGGATaGCTCGAGTCCACCTCTTGC +
Preference number: 3 (lower is better)
Translates to: CRLPATQATDAVASALSSVWAPG*LESTSC
Trigger: GCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGAC...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR GCA 72 bp CCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTaGCCTTGCCGGGCTGCACTGGTAGGGTGGGAGAGT +
Preference number: 3 (lower is better)
Translates to: PSFHAHPRPPNS*PCRAALVGWES
Trigger: ACTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp CCCACTGGCGGGGTCTCCTCCAGTGCTGACAACACTTaGCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: PTGGVSSSADNT*RCLKFGCTLLL
Trigger: GAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACTGGAGGAGACCCCGCCAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp TTCCTGCCTCCCAGCTCTTTCCCTGGAGGCCTACCATaGTGCCAGCCTGGAGCTCTGCCTGTCCTACTGGGA +
Preference number: 3 (lower is better)
Translates to: FLPPSSFPGGLP*CQPGALPVLLG
Trigger: TCCCAGTAGGACAGGCAGAGCTCCAGGCTGGCACCATGGTAGGCCTCCAGGGAAAGAGCTGGGAGGCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCTAGAGCCCAATGTCTaGCCCAAGGCCCTGACTAGA +
Preference number: 3 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWLEPNV*PKALTR
Trigger: TCTAGTCAGGGCCTTGGGCAAGACATTGGGCTCTAG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCAGCCAGGAGGCAAGTaGAGCTTCACTGTGTGTCAG +
Preference number: 3 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWQPGGK*SFTVCQ
Trigger: CTGACACACAGTGAAGCTCAACTTGCCTCCTGGCTG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTCCCAATTCCTGCCCTaGCCGGGCTGCACTGGTAGG +
Preference number: 3 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRSQFLP*PGCTGR
Trigger: CCTACCAGTGCAGCCCGGCAAGGGCAGGAATTGGGA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCGAGGCCCAGAGAGACTaGACCTCTTGCCCAAAGTCA +
Preference number: 3 (lower is better)
Translates to: CRLPATQATDAVASALSSEAQRD*TSCPKS
Trigger: TGACTTTGGGCAAGAGGTCAAGTCTCTCTGGGCCTC...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR GCA 72 bp GGCGGGGTCTCCTCCAGTGCTGACAACACTTGCCGGTaGCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCT +
Preference number: 3 (lower is better)
Translates to: GGVSSSADNTCR*LKFGCTLLLFP
Trigger: AGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACTGGAGGAGACCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp GTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTaGCTGTCAACAGATGCCAACACCCCTGGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: VAKALKTVRMCH*LSTDANTPGRW
Trigger: CCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CCA 72 bp GATGTGCCACTGCCTGTCAACAGATGCCAACACCCCTaGCAGGTGGACTGGCCTTGGATTCCCTCAACGCCT +
Preference number: 3 (lower is better)
Translates to: DVPLPVNRCQHP*QVDWPWIPSTP
Trigger: AGGCGTTGAGGGAATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CAA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCTCCCCTTACCTACATTaGCTTTCCTACAGCCCACGA +
Preference number: 3 (lower is better)
Translates to: CRLPATQATDAVASALSSSPYLH*LSYSPR
Trigger: TCGTGGGCTGTAGGAAAGCAAATGTAGGTAAGGGGA...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTCTATAGCTCCAGCTTaGACATTTTGCGGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWSIAPA*TFCGSG
Trigger: CCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGA...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGGTTTTCTGTGCATCCTaGCTCTCCCCTTACCTACAT +
Preference number: 3 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWVFCAS*LSPYLH
Trigger: ATGTAGGTAAGGGGAGAGCAAGGATGCACAGAAAAC...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp GCACCTCTAGGGACCATAGGCAGTCCCTTCCAGGTGTaGTGTTGTGCAGGGCATCCAGGGAGCGGATGGAAT +
Preference number: 3 (lower is better)
Translates to: APLGTIGSPFQV*CCAGHPGSGWN
Trigger: ATTCCATCCGCTCCCTGGATGCCCTGCACAACATCACACCTGGAAGGGACTGCCTATGGTCCCTAGAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR CCA 72 bp CCCAATTCCTGCCCTTGCCGGGCTGCACTGGTAGGGTaGGAGAGTGGGCAATTAATTCTAGCTCCAGGTTCC +
Preference number: 3 (lower is better)
Translates to: PNSCPCRAALVG*ESGQLILAPGS
Trigger: GGAACCTGGAGCTAGAATTAATTGCCCACTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAGGAATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp CCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTaGCTCTGCCTTGGTCCAAGTTCCTGGGGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: PGTSPSMASLQD*LCLGPSSWGCP
Trigger: TGGACAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp GTGGCTCATGCTGGCTACCGGGCACTTCCCCATCCATaGCCAGTTTGCAAGATTGGCTCTGCCTTGGTCCAA +
Preference number: 3 (lower is better)
Translates to: VAHAGYRALPHP*PVCKIGSALVQ
Trigger: TTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCATGAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGCCAGGGCCCTGCTGCTaGACTAAGGATGATGATGAG +
Preference number: 3 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEPGPCC*TKDDDE
Trigger: CTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTGG...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGTCCAGCTTTGACATTTaGCGGCTCAGGGCAGTCCTG +
Preference number: 3 (lower is better)
Translates to: MLATGHFPIHGQFARLALSSFDI*RLRAVL
Trigger: CAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGA...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCTGTCCTGGGGAAGGTaGTCACAAGCTGATAAGGGC +
Preference number: 3 (lower is better)
Translates to: MLATGHFPIHGQFARLALLSWGR*SQADKG
Trigger: GCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAG...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTCTGTCCTGGGGAAGGTaGTCACAAGCTGATAAGGGC +
Preference number: 3 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPLSWGR*SQADKG
Trigger: GCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAG...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CAA 90 bp GTGATGTTGTGCAGGGCATCCAGGGAGCGGATGGAATTCTTGAGCCAGATCTCCTTGATGTCGAACACGTaGGCGGGCTCTGCATGGGTG +
Preference number: 3 (lower is better)
Translates to: VMLCRASRERMEFLSQISLMSNT*AGSAWV
Trigger: CACCCATGCAGAGCCCGCCAACGTGTTCGACATCAA...GGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR TCA 72 bp CCATTCTCCCTCTCCATCCCTTGGTGGCCAAGGCCTTaGAGACTGTCAGGATGTGCCACTGCCTGTCAACAG +
Preference number: 3 (lower is better)
Translates to: PFSLSIPWWPRP*RLSGCATACQQ
Trigger: CTGTTGACAGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGAGGGAGAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CCA 72 bp CTGCCCTTGCCGGGCTGCACTGGTAGGGTGGGAGAGTaGGCAATTAATTCTAGCTCCAGGTTCCATTCCTCT +
Preference number: 3 (lower is better)
Translates to: LPLPGCTGRVGE*AINSSSRFHSS
Trigger: AGAGGAATGGAACCTGGAGCTAGAATTAATTGCCCACTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp CCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCCTTaGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCC +
Preference number: 3 (lower is better)
Translates to: PIHGQFARLALP*SKFLGLSKRPP
Trigger: GGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp GAGCGGATGGAATTCTTGAGCCAGATCTCCCCCGTGTaGGAATTGATGTCGAACACGTTGGCGGGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: ERMEFLSQISPV*ELMSNTLAGSA
Trigger: TGCAGAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR-3UTR CAA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGGACGTATTTGCCAATaGCATCCTAGAGCCCAATGT +
Preference number: 3 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHGRICQ*HPRAQC
Trigger: ACATTGGGCTCTAGGATGCAATTGGCAAATACGTCC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTCCCCTTACCTACATTaGCTTTCCTACAGCCCACGA +
Preference number: 3 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRSPYLH*LSYSPR
Trigger: TCGTGGGCTGTAGGAAAGCAAATGTAGGTAAGGGGA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACATCTGCCCTCACTCTaGGCAAGATCAATCTTCCAC +
Preference number: 3 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPHLPSL*ARSIFH
Trigger: GTGGAAGATTGATCTTGCCAAGAGTGAGGGCAGATG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTTCCAGCTTTGACATTTaGCGGCTCAGGGCAGTCCTG +
Preference number: 3 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPSSFDI*RLRAVL
Trigger: CAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGA...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTaGCTCATGCTGGCTACCGGGCACTTCCCCATCCAT +
Preference number: 3 (lower is better)
Translates to: LSLAAPSSSFLV*LMLATGHFPIH
Trigger: ATGGATGGGGAAGTGCCCGGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAAGTAGTGCCAAGGATTaGAGTAACGGGGACGTATTT +
Preference number: 3 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQSSAKD*SNGDVF
Trigger: AAATACGTCCCCGTTACTCAAATCCTTGGCACTACT...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp GGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATaGCATCATCCAGTGGTAGCCCCTAAGCCCAGCACA +
Preference number: 3 (lower is better)
Translates to: GRTEVEVCESRQ*HHPVVAPKPST
Trigger: TGTGCTGGGCTTAGGGGCTACCACTGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp ACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTaGCTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGAC +
Preference number: 3 (lower is better)
Translates to: TSPSMASLQDWL*LGPSSWGCPRD
Trigger: GTCTCTTGGACAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp AGTGCTGACAACACTTGCCGGTGCCTTAAGTTTGGCTaGACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCT +
Preference number: 3 (lower is better)
Translates to: SADNTCRCLKFG*TLLLFPSVAHA
Trigger: AGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp CGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTaGCCAGGGCCCTGCTGCTTGACTAAGGATGATGAT +
Preference number: 3 (lower is better)
Translates to: RQDPDSSQCCST*PGPCCLTKDDD
Trigger: ATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp CAGCCTTCTTTAGAGTCACATCTGGGGGTCGAAGAATaGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTG +
Preference number: 3 (lower is better)
Translates to: QPSLESHLGVEE*IHLLKQPGGKL
Trigger: CAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGATGTGACTCTAAAGAAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp AATGATTGTGACTTGGGCTTCATTCAGGACTGTCTGTaGAACCACTCGGAAGATGCCCCTGGGTCCCACCAG +
Preference number: 3 (lower is better)
Translates to: NDCDLGFIQDCL*NHSEDAPGSHQ
Trigger: CTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGTCACAATCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR CAA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCAAGATTGGCTCTGCCTaGGTCCAAGTTCCTGGGGTT +
Preference number: 3 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATKIGSA*VQVPGV
Trigger: AACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTT...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCCCATCCATGGCCAGTTaGCAAGATTGGCTCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATPSMAS*QDWLCL
Trigger: AAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGG...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GATTGTGACTTGGGCTTCATTCAGGACTGTCTGTGGAACCACTCGGAAGATGCCGTTGGCGGGTGGTTGTaGAGGTCCACAATCCTGATG +
Preference number: 3 (lower is better)
Translates to: DCDLGFIQDCLWNHSEDAVGGWL*RSTILM
Trigger: CATCAGGATTGTGGACCTCAACAACCACCCGCCAAC...GGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGTCACAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR GCA 72 bp GCCAAGGATTTGAGTAACGGGGACGTATTTGCCAATTaGATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: AKDLSNGDVFAN*ILEPNVLPKAL
Trigger: CAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAAATCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp GATTCTAGTCAGTGTTGCTCCACGTGGCCAGGGCCCTaGTGCTTGACTAAGGATGATGATGAGATCCCAGTA +
Preference number: 3 (lower is better)
Translates to: DSSQCCSTWPGP*CLTKDDDEIPV
Trigger: TACTGGGATCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTGACTAGAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp AACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTaGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGA +
Preference number: 3 (lower is better)
Translates to: NRCQHPWQVDWP*IPSTPSVPKNR
Trigger: TCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CAA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGCATCTGCCCTCACTCTaGGCAAGATCAATCTTCCAC +
Preference number: 3 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVHLPSL*ARSIFH
Trigger: GTGGAAGATTGATCTTGCCAAGAGTGAGGGCAGATG...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTATCAACTGCCCTGAATaGTCTCTTCAAGGATGGCTG +
Preference number: 3 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPINCPE*SLQGWL
Trigger: CAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGAT...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTTGTCACATCCATTTATaGTCCATGAGGCTACAGCTC +
Preference number: 3 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPCHIHL*SMRLQL
Trigger: GAGCTGTAGCCTCATGGACAATAAATGGATGTGACA...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CAA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGCTGCAGAAAAATACTTaGCATTCATGCCGCTTTGCA +
Preference number: 3 (lower is better)
Translates to: SGGRRMDPPAEAARRQVELQKNT*HSCRFA
Trigger: TGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCAG...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACAAAGCATTCCCTCCTaGAGAACTCATTTTCTTCAT +
Preference number: 3 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPQSIPS*RTHFLH
Trigger: ATGAAGAAAATGAGTTCTCAAGGAGGGAATGCTTTG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCGCTCGAGTCCACCTCTaGCTTAATACTGTTCACGTT +
Preference number: 3 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATARVHL*LNTVHV
Trigger: AACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGC...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGGGATCAGCATGGCCTTaGGGTAACAGACTTTATTTT +
Preference number: 3 (lower is better)
Translates to: MLATGHFPIHGQFARLALGSAWP*GNRLYF
Trigger: AAAATAAAGTCTGTTACCCAAAGGCCATGCTGATCC...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp GGATGGGTGAGCTGGCTTCTCGTCAATTCTCAGCCCTaGAGAATGGAGGGCATTGTAGTAGTGCCAAGGATT +
Preference number: 3 (lower is better)
Translates to: GWVSWLLVNSQP*RMEGIVVVPRI
Trigger: AATCCTTGGCACTACTACAATGCCCTCCATTCTTCAGGGCTGAGAATTGACGAGAAGCCAGCTCACCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp TCACCACATCTCAGCCCTGATATTCATCAACTGCCCTaGATTGTCTCTTCAAGGATGGCTGGTGGGGCAGCT +
Preference number: 3 (lower is better)
Translates to: SPHLSPDIHQLP*IVSSRMAGGAA
Trigger: AGCTGCCCCACCAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGATGAATATCAGGGCTGAGATGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp CAGAAAGACTGGTCTCCACAGGTCAGCAAACATAAATaGAAGCAGGGAGCAGGGGATCAGCATGGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: QKDWSPQVSKHK*KQGAGDQHGLW
Trigger: CCAAAGGCCATGCTGATCCCCTGCTCCCTGCTTTCATTTATGTTTGCTGACCTGTGGAGACCAGTCTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp AAGCTGATAAGGGCTGCCCTGGCTAGACAAGATCTTTaGTACCAACCTGCTGTGTGGCCTCAAGCAAAGCAT +
Preference number: 3 (lower is better)
Translates to: KLIRAALARQDL*YQPAVWPQAKH
Trigger: ATGCTTTGCTTGAGGCCACACAGCAGGTTGGTAGCAAAGATCTTGTCTAGCCAGGGCAGCCCTTATCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp TCAGTCTGGGCTCCTGGATTGCTCGAGTCCACCTCTTaGTTAATACTGTTCACGTTGGGGACTGTAGAAACC +
Preference number: 3 (lower is better)
Translates to: SVWAPGLLESTS*LILFTLGTVET
Trigger: GGTTTCTACAGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp GCAATTAATTCTAGCTCCAGGTTCCATTCCTCTCCATaGAGCCCTGCCTGGGCTTGTCCTGTTTGGGAGAAA +
Preference number: 3 (lower is better)
Translates to: AINSSSRFHSSP*SPAWACPVWEK
Trigger: TTTCTCCCAAACAGGACAAGCCCAGGCAGGGCTGCATGGAGAGGAATGGAACCTGGAGCTAGAATTAATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp GCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTaGAAGAGCTGCACCCACAGAACTGGGCTGCAGAAA +
Preference number: 3 (lower is better)
Translates to: AWQSRCEAPNTF*KSCTHRTGLQK
Trigger: TTTCTGCAGCCCAGTTCTGTGGGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp AAACCTGTTTTGGGGTCCGCTCTCTCCATAGAATGTTaGCGGGTGGTTGTTGAGGTCCACAATCCTGATGGT +
Preference number: 3 (lower is better)
Translates to: KPVLGSALSIEC*RVVVEVHNPDG
Trigger: ACCATCAGGATTGTGGACCTCAACAACCACCCGCCAACATTCTATGGAGAGAGCGGACCCCAAAACAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR CAA 90 bp TGTCACCATCATGAAATAGCCTGGGCTACCATGAAGGTGAGAGTGGATGTTCAGAGAGCCAGGAGCATGTaGGTGGGTAGGGAAGTATTC +
Preference number: 3 (lower is better)
Translates to: CHHHEIAWATMKVRVDVQRARSM*VGREVF
Trigger: GAATACTTCCCTACCCACCAACATGCTCCTGGCTCT...CTGAACATCCACTCTCACCTTCATGGTAGCCCAGGCTATTTCATGATGGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
3UTR-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCAGTAGTGCCAAGGATTaGAGTAACGGGGACGTATTT +
Preference number: 3 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAASSAKD*SNGDVF
Trigger: AAATACGTCCCCGTTACTCAAATCCTTGGCACTACT...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCTGGCAAATTAAAGACTaGGAGCTCTGGTTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAAWQIKD*ELWFSL
Trigger: CAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCA...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGCAAAGCATTCCCTCCTaGAGAACTCATTTTCTTCAT +
Preference number: 3 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEQSIPS*RTHFLH
Trigger: ATGAAGAAAATGAGTTCTCAAGGAGGGAATGCTTTG...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCTTAATACTGTTCACGTaGGGGACTGTAGAAACCCCA +
Preference number: 3 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATLILFT*GTVETP
Trigger: TGGGGTTTCTACAGTCCCCAACGTGAACAGTATTAA...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp TACAGTGGTCTACGGATCTTGAGGGTGTCACCATCATaGAATAGCCTGGGCTACCATGAAGGTGAGAGTGGA +
Preference number: 3 (lower is better)
Translates to: YSGLRILRVSPS*NSLGYHEGESG
Trigger: TCCACTCTCACCTTCATGGTAGCCCAGGCTATTTCATGATGGTGACACCCTCAAGATCCGTAGACCACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
3UTR GCA 72 bp AAGTCTCACCACATCTCAGCCCTGATATTCATCAACTaGCCTGAATTGTCTCTTCAAGGATGGCTGGTGGGG +
Preference number: 3 (lower is better)
Translates to: KSHHISALIFIN*PELSLQGWLVG
Trigger: CCCCACCAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGATGAATATCAGGGCTGAGATGTGGTGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp GCTGCACCCACAGAACTGGGCTGCAGAAAAATACTTTaGATTCATGCCGCTTTGCACTTGGTTAAAGCCCTC +
Preference number: 3 (lower is better)
Translates to: AAPTELGCRKIL*IHAALHLVKAL
Trigger: GAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCAGCCCAGTTCTGTGGGTGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp TCAATGGCAGCTGAGTTCTCCACAATGATTGTGACTTaGGCTTCATTCAGGACTGTCTGTGGAACCACTCGG +
Preference number: 3 (lower is better)
Translates to: SMAAEFSTMIVT*ASFRTVCGTTR
Trigger: CCGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGTCACAATCATTGTGGAGAACTCAGCTGCCATTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR-3UTR CAA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTCTAGAGCCCAATGTCTaGCCCAAGGCCCTGACTAGA +
Preference number: 3 (lower is better)
Translates to: HLVKALITTIFFNPHPRPLEPNV*PKALTR
Trigger: TCTAGTCAGGGCCTTGGGCAAGACATTGGGCTCTAG...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp AGCTTTCCCAAGGTTACGCGATGTGAGCAAAAGAGCTaGATAAAAACGGAAGTCTCACCACATCTCAGCCCT +
Preference number: 3 (lower is better)
Translates to: SFPKVTRCEQKS*IKTEVSPHLSP
Trigger: AGGGCTGAGATGTGGTGAGACTTCCGTTTTTATCCAGCTCTTTTGCTCACATCGCGTAACCTTGGGAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp TTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTaGTTCTCTCTGACGGTAGCTGGCCAGGACGGTAGC +
Preference number: 3 (lower is better)
Translates to: FSSSWQIKDLEL*FSLTVAGQDGS
Trigger: GCTACCGTCCTGGCCAGCTACCGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCTGGCAAATTAAAGACTaGGAGCTCTGGTTCTCTCTG +
Preference number: 3 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITWQIKD*ELWFSL
Trigger: CAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCA...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CAA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAATTAACCCCAGAGGCCTaGTATGACTTCTGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: TRPANVLLFKISAWQFGQLTPEA*YDFCPG
Trigger: CCCAGGACAGAAGTCATACAAGGCCTCTGGGGTTAA...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp GCACAACCTATTTGTATTAACCCCAGAGGCCTTGTATaGCTTCTGTCCTGGGGAAGGTTGTCACAAGCTGAT +
Preference number: 3 (lower is better)
Translates to: AQPICINPRGLV*LLSWGRLSQAD
Trigger: ATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGCCTCTGGGGTTAATACAAATAGGTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp AGGCTGGAAAGTACTTATTTGCTCAGTCTGGGCTCCTaGATTGCTCGAGTCCACCTCTTGCTTAATACTGTT +
Preference number: 3 (lower is better)
Translates to: RLESTYLLSLGS*IARVHLLLNTV
Trigger: AACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAGTACTTTCCAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp CTCAGCCGCAGGAGGAAAATGACTCTGCAGAGTATTTaGTGTCACATCCATTTATTGTCCATGAGGCTACAG +
Preference number: 3 (lower is better)
Translates to: LSRRRKMTLQSI*CHIHLLSMRLQ
Trigger: CTGTAGCCTCATGGACAATAAATGGATGTGACACCAAATACTCTGCAGAGTCATTTTCCTCCTGCGGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR-3UTR CAA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTGTTTTCTGTGCATCCTaGCTCTCCCCTTACCTACAT +
Preference number: 3 (lower is better)
Translates to: HLVKALITTIFFNPHPRPVFCAS*LSPYLH
Trigger: ATGTAGGTAAGGGGAGAGCAAGGATGCACAGAAAAC...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp AGCGACTTTAAACAGCTTTCCCAAGGTTACGCGATGTaGGCAAAAGAGCTGGATAAAAACGGAAGTCTCACC +
Preference number: 3 (lower is better)
Translates to: SDFKQLSQGYAM*AKELDKNGSLT
Trigger: GGTGAGACTTCCGTTTTTATCCAGCTCTTTTGCTCACATCGCGTAACCTTGGGAAAGCTGTTTAAAGTCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp GTAAAGGACTTTGTTATTTCACGTGATTGGAAGATCTaGGCTCAGCCGCAGGAGGAAAATGACTCTGCAGAG +
Preference number: 3 (lower is better)
Translates to: VKDFVISRDWKI*AQPQEENDSAE
Trigger: CTCTGCAGAGTCATTTTCCTCCTGCGGCTGAGCTCAGATCTTCCAATCACGTGAAATAACAAAGTCCTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR GCA 72 bp AGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTaGACCCACAGAACTGGGCTGCAGAAAAATACTTTG +
Preference number: 3 (lower is better)
Translates to: SRCEAPNTFWKS*THRTGLQKNTL
Trigger: CAAAGTATTTTTCTGCAGCCCAGTTCTGTGGGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp GGAGAAAAGTCCAGTAGACAAGGCCTGCAAATGTCCTaGTGTTCAAGATATCTGCATGGCAATTTGGACAAA +
Preference number: 3 (lower is better)
Translates to: GEKSSRQGLQMS*CSRYLHGNLDK
Trigger: TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGTCTACTGGACTTTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCGGACGTATTTGCCAATaGCATCCTAGAGCCCAATGT +
Preference number: 3 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFGRICQ*HPRAQC
Trigger: ACATTGGGCTCTAGGATGCAATTGGCAAATACGTCC...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGACAGCCAGGAGGCAAGTaGAGCTTCACTGTGTGTCAG +
Preference number: 3 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRQPGGK*SFTVCQ
Trigger: CTGACACACAGTGAAGCTCAACTTGCCTCCTGGCTG...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGATTAACCCCAGAGGCCTaGTATGACTTCTGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRLTPEA*YDFCPG
Trigger: CCCAGGACAGAAGTCATACAAGGCCTCTGGGGTTAA...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGATCTATAGCTCCAGCTTaGACATTTTGCGGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRSIAPA*TFCGSG
Trigger: CCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGA...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGAATCAACTGCCCTGAATaGTCTCTTCAAGGATGGCTG +
Preference number: 3 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRINCPE*SLQGWL
Trigger: CAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGAT...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp CCAAATGCAAAGAACTGTTCTACTTTTCTCTCTCTGTaGACACATGTAGATTTCCTGATAGCAGGTTCCTTA +
Preference number: 3 (lower is better)
Translates to: PNAKNCSTFLSL*THVDFLIAGSL
Trigger: TAAGGAACCTGCTATCAGGAAATCTACATGTGTGCACAGAGAGAGAAAAGTAGAACAGTTCTTTGCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR GCA 72 bp TGTATTCTAGAGGGGTTGTTAGTAAGTAGAGCCAAATaGAAAGAACTGTTCTACTTTTCTCTCTCTGTGCAC +
Preference number: 3 (lower is better)
Translates to: CILEGLLVSRAK*KELFYFSLSVH
Trigger: GTGCACAGAGAGAGAAAAGTAGAACAGTTCTTTGCATTTGGCTCTACTTACTAACAACCCCTCTAGAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CCA 72 bp GCAGAAAAATACTTTGCATTCATGCCGCTTTGCACTTaGTTAAAGCCCTCATCACCACTATTTTCTTCAATC +
Preference number: 3 (lower is better)
Translates to: AEKYFAFMPLCT*LKPSSPLFSSI
Trigger: GATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR-3UTR CAA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGATTAATACTGTTCACGTaGGGGACTGTAGAAACCCCA +
Preference number: 3 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRLILFT*GTVETP
Trigger: TGGGGTTTCTACAGTCCCCAACGTGAACAGTATTAA...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR TCA 72 bp TTTAGACCATACAAGTTTAAGGCAAATGCCTTTGATTaGGGAGACATTTGTAAGCAGGGCTACTTGCTTTTA +
Preference number: 3 (lower is better)
Translates to: FRPYKFKANAFD*GDICKQGYLLL
Trigger: TAAAAGCAAGTAGCCCTGCTTACAAATGTCTCCTCAATCAAAGGCATTTGCCTTAAACTTGTATGGTCTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR GCA 72 bp AGGCACTTTACATATATTAGATCTTTTCATCCTCTCTaGAACCATACTTTGCACCCTGTGTTAATGAGGAAA +
Preference number: 3 (lower is better)
Translates to: RHFTYIRSFHPL*NHTLHPVLMRK
Trigger: TTTCCTCATTAACACAGGGTGCAAAGTATGGTTGCAGAGAGGATGAAAAGATCTAATATATGTAAAGTGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCGACGGTGGCCATGGTaGCGGCCAGCACACCCACGG +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWRRWPW*RPAHPR
Trigger: CCGTGGGTGTGCTGGCCGGCACCATGGCCACCGTCG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCACTCAATGCGGATGGTaGGGGGCGCAGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CRLPATQATDAVASALSSTQCGW*GAQGWA
Trigger: GGCCCAGCCCTGCGCCCCGCACCATCCGCATTGAGT...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCCACGACGGTGGCCATaGTGCCGGCCAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWPRRWP*CRPAHP
Trigger: TGGGTGTGCTGGCCGGCACCATGGCCACCGTCGTGG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCCAGGGCTGGGCCGCTTaGGGAGCACCCGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSQGWAA*GAPAAL
Trigger: CAATGCGGCGGGTGCTCCGCAAGCGGCCCAGCCCTG...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGGCACGGAGCATGCCCTaGGCCCGCGGGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRARSMP*ARGEGR
Trigger: TCTGCCCTCCCCGCGGGCCCAGGGCATGCTCCGTGC...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGGTGGCCTGGGCAGCTaGGCTCCCCGCAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQGGLGS*APRRAH
Trigger: ATGAGCCCTGCGGGGAGCCCAGCTGCCCAGGCCACC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GGGCAGCTGGGCTCCCCGCAGGGCTCATTTCAGTCACCTGTACATGCAGCTCATACTGGGACGGTGGCCTaGGCAGCTGGGCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GQLGSPQGSFQSPVHAAHTGTVA*AAGLPA
Trigger: TGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGT...ATGAGCTGCATGTACAGGTGACTGAAATGAGCCCTGCGGGGAGCCCAGCTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGGGCGCCACGCTGGGTaGTGGAGGGAGAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPGRHAG*WRESRS
Trigger: GCTCCGGCTCTCCCTCCACCACCCAGCGTGGCGCCC...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGTCCGAGCAGCAGGGTaGTGGGGGTCAGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHVRAAG*WGSGAE
Trigger: CTCCGCCCCTGACCCCCACCACCCTGCTGCTCGGAC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGACACAGGGACTTGGCTaGCCTCACCCCACTGGCGGG +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWTQGLG*PHPTGG
Trigger: CCCGCCAGTGGGGTGAGGCCAGCCAAGTCCCTGTGT...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGCACGGTCCACTGGGCTaGGCCAGTGCTGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRHGPLG*ASAGRH
Trigger: GTGGCGCCCAGCACTGGCGCAGCCCAGTGGACCGTG...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACACGGTCCACTGGGCTaGGCCAGTGCTGGGCGCCAC +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPHGPLG*ASAGRH
Trigger: GTGGCGCCCAGCACTGGCGCAGCCCAGTGGACCGTG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCAGAGTGGCCCCAGCCTaGAGGCGCAGCACACCGCTG +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSRVAPA*RRSTPL
Trigger: CAGCGGTGTGCTGCGCCTCCAGGCTGGGGCCACTCT...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATCGCCACGCTGGGTGGTaGAGGGAGAGCCGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ATACQQMPTPLAGGLALDRHAGW*RESRSS
Trigger: AGAGCTCCGGCTCTCCCTCCACCACCCAGCGTGGCG...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGGGCGCCACGCTGGGTaGTGGAGGGAGAGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPGRHAG*WRESRS
Trigger: GCTCCGGCTCTCCCTCCACCACCCAGCGTGGCGCCC...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGGGCGGGAGCGGCGGGTaGCGTGAGGGCGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQGGSGG*REGAKR
Trigger: CCTCTTAGCGCCCTCACGCCACCCGCCGCTCCCGCC...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 72 bp GCATTGGCTCCCTGGTCGGAGTCATTGACGGTGATCTaGAGGCCCCGCAGGATCTCTCCCTGGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: ALAPWSESLTVI*RPRRISPWGGC
Trigger: GCACCCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGACTCCGACCAGGGAGCCAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR TCA 90 bp GTCGGAGTCATTGACGGTGATCTTGAGGCCCCGCAGGATCTCTCCCTGGGGTGGAGCTGGGCCGGGCTCTaGGTGATGGAGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VGVIDGDLEAPQDLSLGWSWAGL*VMEMAP
Trigger: TGGAGCCATCTCCATCACTCAGAGCCCGGCCCAGCT...CCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGACTCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR GCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGACTCAATGCGGATGGTaGGGGGCGCAGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRTQCGW*GAQGWA
Trigger: GGCCCAGCCCTGCGCCCCGCACCATCCGCATTGAGT...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGACTGGGCTGCGCCAGTaGTGGGCGCCACGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVETGLRQ*WAPRWV
Trigger: CACCCAGCGTGGCGCCCAGCACTGGCGCAGCCCAGT...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTCCCTGGTCGGAGTCATTGACGGTGATCTTGAGGCCCCGCAGGATCTCTCCCGGCGCAGGGGAGTCGTaGCACAGGATCGTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: APWSESLTVILRPRRISPGAGES*HRIVLH
Trigger: ATGCAGGACGATCCTGTGGCACGACTCCCCTGCGCC...GGGAGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGACTCCGACCAGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCCAGCACAGTGCCTGCTaGGGCGCTTGGCAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: CRLPATQATDAVASALSSQHSAC*GAWQSR
Trigger: TCTACTCTGCCAAGCGCCCCAGCAGGCACTGTGCTG...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCGTAACACAGGGACTTaGCTGGCCTCACCCCACTGG +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWRNTGT*LASPHW
Trigger: CCAGTGGGGTGAGGCCAGCCAAGTCCCTGTGTTACG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGGGGGCGAAGTTGGCCTaGGCCAAGCAGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEGAKLA*AKQRRS
Trigger: GCTGCGCCTCTGCTTGGCTCAGGCCAACTTCGCCCC...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATGACCGTGGTGGTGGCTaGGAACACCACATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ATACQQMPTPLAGGLALDDRGGG*EHHISP
Trigger: GGGGCTGATGTGGTGTTCTCAGCCACCACCACGGTC...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAAGCTGGGCCGGGCTCTaGGTGATGGAGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQSWAGL*VMEMAP
Trigger: TGGAGCCATCTCCATCACTCAGAGCCCGGCCCAGCT...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCTGCCTGTCAACAGATaGCAACACCCCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWLPVNR*QHPWQV
Trigger: CACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp ACCACTCGGAAGATGCCCCTGGGTCCCACCAGCTGCAAGTTGAATTTGGCATTGGGTGGCCTGGGCAGCTaGGCTCCCCGCAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: TTRKMPLGPTSCKLNLALGGLGS*APRRAH
Trigger: ATGAGCCCTGCGGGGAGCCCAGCTGCCCAGGCCACC...CAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGGGAGCCCCGGTCCTTaGCCTGCACCTCTAGGGACC +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPGSPGP*PAPLGT
Trigger: GGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCC...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGGCCACTCAATGCGGATaGTGCGGGGCGCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALATQCG*CGAQGW
Trigger: CCAGCCCTGCGCCCCGCACCATCCGCATTGAGTGGC...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGCGCCACGCTGGGTGGTaGAGGGAGAGCCGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQRHAGW*RESRSS
Trigger: AGAGCTCCGGCTCTCCCTCCACCACCCAGCGTGGCG...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGGTTTTGGCGGGGGTTaGGTCGGCTGCGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHGFGGG*VGCGVR
Trigger: TCTCACTCCGCAGCCGACCCAACCCCCGCCAAAACC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCACCATGGTGCCAGCCTaGAGCTCTGCCTGTCCTACT +
Preference number: 4 (lower is better)
Translates to: CRLPATQATDAVASALSSTMVPA*SSACPT
Trigger: AGTAGGACAGGCAGAGCTCCAGGCTGGCACCATGGT...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCAGGCCACAGATGCTGTaGCATCTGCCCTGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CRLPATQATDAVASALSSRPQML*HLPCPP
Trigger: TGGAGGACAGGGCAGATGCCACAGCATCTGTGGCCT...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp CCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGGGCTCTGCATGCTGGATCCACAGCTGTaGCAGCCACCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PDLPRVGIDVEHVGGLCMLDPQL*QPPRWS
Trigger: GCTCCAGCGTGGTGGCTGTCACAGCTGTGGATCCAG...CATGCAGAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR TCA 90 bp TGTATCAGGAAGGCAGCCATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATGGTAAGGCTGTGGTGCTaGAGGATGGGGAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: CIRKAAMGLRERVSASVMVRLWC*RMGSPG
Trigger: ACCGGGGCTCCCCATCCTTCAGCACCACAGCCTTAC...CATCACAGATGCTGAGACCCTCTCCCGGAGCCCCATGGCTGCCTTCCTGATACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR TCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAATCTTGCCCAAGGCCCTaGCTAGAGCCCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQSCPRP*LEPCQS
Trigger: GCTCTGACAGGGCTCTAGTCAGGGCCTTGGGCAAGA...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCGAGGTCTGGGATGGGTaGGCTGGCTTCTCGTCAATT +
Preference number: 4 (lower is better)
Translates to: CRLPATQATDAVASALSSEVWDG*AGFSSI
Trigger: AATTGACGAGAAGCCAGCTCACCCATCCCAGACCTC...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGCCCCGGTCCTTGGCCTaGACCTCTAGGGACCATAGG +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRPRSLA*TSRDHR
Trigger: CCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGG...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCGGTCCCGGATCCACTTaGAAGCCCAAGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSGPGST*KPKLPA
Trigger: GGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACC...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATGGTCCCGGATCCACTTaGAAGCCCAAGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ATACQQMPTPLAGGLALDGPGST*KPKLPA
Trigger: GGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACC...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAGGTGGCCTGGGCAGCTaGGCTCCCCGCAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGGGLGS*APRRAH
Trigger: ATGAGCCCTGCGGGGAGCCCAGCTGCCCAGGCCACC...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTGTATCAGGAAGGCAGCCATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATCACGCTGGAGCCCCCTaGGGCGTTCTCAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: LYQEGSHGAPGEGLSICDHAGAP*GVLRNP
Trigger: AGGATTCCTGAGAACGCCCCAGGGGGCTCCAGCGTG...ATCACAGATGCTGAGACCCTCTCCCGGAGCCCCATGGCTGCCTTCCTGATACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp GATGGGGAGCCCCGGTCCTTGGCCTGCACCTCTAGGGACCATAGGCAGTCCCTTCCAGGGTCCTGTATCTaGATCCACAGCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: DGEPRSLACTSRDHRQSLPGSCI*IHSCDS
Trigger: GCTGTCACAGCTGTGGATCCAGATACAGGACCCTGG...AAGGGACTGCCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp CAGGAAGGCAGCCATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATGTCAATTGTGGTGCTGAAGGATaGGGAGCCCCGGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QEGSHGAPGEGLSICDVNCGAEG*GAPVLG
Trigger: GCCAAGGACCGGGGCTCCCCATCCTTCAGCACCACA...ATTGACATCACAGATGCTGAGACCCTCTCCCGGAGCCCCATGGCTGCCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCCACCCACGGCCTTCATaGGGTTGTCCTTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: CRLPATQATDAVASALSSHPRPS*GCPWSV
Trigger: TACAGACCAAGGACAACCCCATGAAGGCCGTGGGTG...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTCCACGACGGTGGCCATaGTGCCGGCCAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPPRRWP*CRPAHP
Trigger: TGGGTGTGCTGGCCGGCACCATGGCCACCGTCGTGG...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCGAGCACCCGCCGCATTaGCAGGACCTTGTTAGACTT +
Preference number: 4 (lower is better)
Translates to: CRLPATQATDAVASALSSEHPPH*QDLVRL
Trigger: AAGTCTAACAAGGTCCTGCCAATGCGGCGGGTGCTC...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGGTTTTGGCGGGGGTTaGGTCGGCTGCGGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPGFGGG*VGCGVR
Trigger: TCTCACTCCGCAGCCGACCCAACCCCCGCCAAAACC...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGCAGTGTTGCTCCACGTaGCCAGGGCCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRQCCST*PGPCCL
Trigger: CAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTG...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCCTGCTGGGGCGCTTaGCAGAGTAGATGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQACWGA*QSRCEA
Trigger: AGCCTCACATCTACTCTGCCAAGCGCCCCAGCAGGC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAACAGCACAGTGCCTGCTaGGGCGCTTGGCAGAGTAGA +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQQHSAC*GAWQSR
Trigger: TCTACTCTGCCAAGCGCCCCAGCAGGCACTGTGCTG...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATCGTAACACAGGGACTTaGCTGGCCTCACCCCACTGG +
Preference number: 4 (lower is better)
Translates to: ATACQQMPTPLAGGLALDRNTGT*LASPHW
Trigger: CCAGTGGGGTGAGGCCAGCCAAGTCCCTGTGTTACG...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGGGCCGGGCTCTGAGTaGTGGAGATGGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPGPGSE*WRWLQM
Trigger: CATCTGGAGCCATCTCCATCACTCAGAGCCCGGCCC...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp AGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGGGCTCTGCACCCCCGTGTGGGAATTaGTGTCGAACACGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SQISPVWELMSNTLAGSAPPCGN*CRTRWR
Trigger: CCGCCAACGTGTTCGACATCAATTCCCACACGGGGG...TGCAGAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR TCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGTAAGGCTGTGGTGCTaGAGGATGGGGAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPVRLWC*RMGSPG
Trigger: ACCGGGGCTCCCCATCCTTCAGCACCACAGCCTTAC...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCAGCTACGCTGTACTTaGCTTCCATGTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWQLRCT*LPCPLP
Trigger: AGGCAGAGGACATGGAAGGCAAGTACAGCGTAGCTG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGGTTGTTGGGTTCCTCTaGATCCTCGTCTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWVVGFL*ILVYGL
Trigger: GAGGCCATAGACGAGGATGCAGAGGAACCCAACAAC...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTCAGGGCTGGGCCGCTTaGGGAGCACCCGCCGCATTG +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTQGWAA*GAPAAL
Trigger: CAATGCGGCGGGTGCTCCGCAAGCGGCCCAGCCCTG...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGATTCTAGTCAGTGTTaGTCCACGTGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHDSSQC*STWPGP
Trigger: GGGCCCTGGCCACGTGGAGCAACACTGACTAGAATC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTCCTGCTCTCAGCTaGAGGCGTCAGGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQAPALS*RRQDPD
Trigger: ATCTGGATCCTGACGCCTGCAGCTGAGAGCAGGAGC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGGCCCAGCACAGTGCCTaGTGGGGCGCTTGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQAQHSA*WGAWQS
Trigger: ACTCTGCCAAGCGCCCCAGCAGGCACTGTGCTGGGC...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGCTAAGCCCAGCACAGTaGCTGCTGGGGCGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQLSPAQ*LLGRLA
Trigger: TGCCAAGCGCCCCAGCAGGCACTGTGCTGGGCTTAG...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGGGAGGCCTACCATGGTaGCAGCCTGGAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALGGLPW*QPGALP
Trigger: AGGCAGAGCTCCAGGCTGGCACCATGGTAGGCCTCC...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TGCAGGCTGCCGGCTACACAGGCCACAGATGCTGTGGCATCTGCCCTGTCCTCCATTCTGAGGGACAGCTaGTTGAGGACAGAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: CRLPATQATDAVASALSSILRDS*LRTECH
Trigger: GTGGCACTCTGTCCTCAAGCAGCTGTCCCTCAGAAT...GGAGGACAGGGCAGATGCCACAGCATCTGTGGCCTGTGTAGCCGGCAGCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GATGGGGAGCCCCGGTCCTTGGCCTGCACCTCTAGGGACCATAGGCAGTCCCTTCCCCAGTCCCATAGGTaGAATATTTCACTTCGCCCC +
Preference number: 4 (lower is better)
Translates to: DGEPRSLACTSRDHRQSLPQSHR*NISLRP
Trigger: GGGGCGAAGTGAAATATTCCACCTATGGGACTGGGG...AAGGGACTGCCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp ATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATGTCAATCTTGAGTAAGGCTGGGAGCCCCGGTCCTTaGCCTGCACCTCTAGGGACC +
Preference number: 4 (lower is better)
Translates to: MGLRERVSASVMSILSKAGSPGP*PAPLGT
Trigger: GGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCC...AGCCTTACTCAAGATTGACATCACAGATGCTGAGACCCTCTCCCGGAGCCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTTGTGGTGCTGAAGGATaGGGAGCCCCGGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPCGAEG*GAPVLG
Trigger: GCCAAGGACCGGGGCTCCCCATCCTTCAGCACCACA...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAGTAGGCACGGTCCACTaGGCTGCGCCAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGVGTVH*AAPVLG
Trigger: GCCCAGCACTGGCGCAGCCCAGTGGACCGTGCCTAC...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCGGGGCGGAGGAAAGATaGGGGGTCATAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSGAEER*GVIGHT
Trigger: TGTATGCCCTATGACCCCCCATCTTTCCTCCGCCCC...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGGCACTTCCCCATCCATaGCCAGTTTGCAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWALPHP*PVCKIG
Trigger: GCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGC...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCACCATGGTGCCAGCCTaGAGCTCTGCCTGTCCTACT +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSTMVPA*SSACPT
Trigger: AGTAGGACAGGCAGAGCTCCAGGCTGGCACCATGGT...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGCCTGGAGGCCTACCATaGTGCCAGCCTGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEPGGLP*CQPGAL
Trigger: CAGAGCTCCAGGCTGGCACCATGGTAGGCCTCCAGG...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTCCCAGCTCTTTCCCTaGAGGCCTACCATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHSQLFP*RPTMVP
Trigger: TGGCACCATGGTAGGCCTCCAGGGAAAGAGCTGGGA...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAATGGTGCTCTTGGACTTaGGCCACTCAATGCGGATGG +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQWCSWT*ATQCGW
Trigger: CCATCCGCATTGAGTGGCTCAAGTCCAAGAGCACCA...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGTCTTGCCCAAGGCCCTaGCTAGAGCCCTGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVESCPRP*LEPCQS
Trigger: GCTCTGACAGGGCTCTAGTCAGGGCCTTGGGCAAGA...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGAACCTGAGGGACTGTaGGGTCTGGGATGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPEPEGL*GLGWVS
Trigger: GCTCACCCATCCCAGACCTCACAGTCCCTCAGGTTC...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTCTCCCTGGGGTGGGTaGTCATTCATGGACAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHSPWGG*SFMDSS
Trigger: TGAGCTGTCCATGAATGAGCACCCACCCCAGGGAGA...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCATCCATGGCCAGTTTaGAAGATTGGCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWHPWPV*KIGSAL
Trigger: CAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGGCCAGCCTGGAGCTCTaGCTGTCCTACTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEASLEL*LSYWDL
Trigger: TAGGTCCCAGTAGGACAGGCAGAGCTCCAGGCTGGC...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGGGAGGCCTACCATGGTaGCAGCCTGGAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQGGLPW*QPGALP
Trigger: AGGCAGAGCTCCAGGCTGGCACCATGGTAGGCCTCC...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGCAAGCCTGCCCAGTGTaGCATTCCTGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEQACPV*HSCLPA
Trigger: AGCTGGGAGGCAGGAATGGCACACTGGGCAGGCTTG...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGGCACGGAGCATGCCCTaGGCCCGCGGGGAGGGCAGA +
Preference number: 4 (lower is better)
Translates to: DVQTFKPSKRSLVVHMRQARSMP*ARGEGR
Trigger: TCTGCCCTCCCCGCGGGCCCAGGGCATGCTCCGTGC...CTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGATCTCTCCCTGGGGTaGGTGCTCATTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHDLSLG*VLIHGQ
Trigger: CTGTCCATGAATGAGCACCCACCCCAGGGAGAGATC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGGCATTGGCTCCCTaGTCGGAGTCATTGACGGTG +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHLALAP*SESLTV
Trigger: CACCGTCAATGACTCCGACCAGGGAGCCAATGCCAA...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAATTGGCATTGGCTCCCTaGTCGGAGTCATTGACGGTG +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQLALAP*SESLTV
Trigger: CACCGTCAATGACTCCGACCAGGGAGCCAATGCCAA...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCGTTCTCAGGAATCCTaGCAACGTAGTAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWRSQES*QRSRGS
Trigger: ACTCCCTCTACTACGTTGCCAGGATTCCTGAGAACG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTCACGCTGGAGCCCCCTaGGGCGTTCTCAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPHAGAP*GVLRNP
Trigger: AGGATTCCTGAGAACGCCCCAGGGGGCTCCAGCGTG...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTGGGAGCCCCGGTCCTTaGCCTGCACCTCTAGGGACC +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTGSPGP*PAPLGT
Trigger: GGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCC...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGGTCCTCTGTCCCACGTaGGCATACCAGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALVLCPT*AYQGPQ
Trigger: CTGTGGACCCTGGTATGCCCACGTGGGACAGAGGAC...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGATGCTGTATTCCCTGTaGAGGGCAAGCATGATCCAG +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWMLYSL*RASMIQ
Trigger: CTGGATCATGCTTGCCCTCCACAGGGAATACAGCAT...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGGCTGCACTGGTAGGGTaGGAGAGTGGGCAATTAATT +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWAALVG*ESGQLI
Trigger: AATTAATTGCCCACTCTCCCACCCTACCAGTGCAGC...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAATCCTCTTTCCTAGTGTaGCTCATGCTGGCTACCGGG +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQSSFLV*LMLATG
Trigger: CCCGGTAGCCAGCATGAGCCACACTAGGAAAGAGGA...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCAGCTGGGCCGGGCTCTaGGTGATGGAGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTSWAGL*VMEMAP
Trigger: TGGAGCCATCTCCATCACTCAGAGCCCGGCCCAGCT...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCCTGGATCCACAGCTGTaGCAGCCACCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTLDPQL*QPPRWS
Trigger: GCTCCAGCGTGGTGGCTGTCACAGCTGTGGATCCAG...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTCGGGCTCTGCATGGGTaGTGGAATAGTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPRALHG*WNSPPG
Trigger: ACCTGGTGGACTATTCCATCACCCATGCAGAGCCCG...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAAGCGGATGGAATTCTTaGGCCAGATCTCCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPSGWNS*ARSPPC
Trigger: ACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCT...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp CTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGGGCTCAGCGGATGGAATTCTTaGGCCAGATCTCCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: LEPDLPRVGIDVEHVGGLSGWNS*ARSPPC
Trigger: ACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCT...GAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR TCA 90 bp CTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGGGCTCAGTCCCTTCCAGGTGTaGTGTTGTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: LEPDLPRVGIDVEHVGGLSPFQV*CCAGHP
Trigger: TGGATGCCCTGCACAACATCACACCTGGAAGGGACT...GAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR GCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGAATTCGATTGGGTTTaGCCCGGTCTCCATCCATGG +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHEFDWV*PGLHPW
Trigger: CCATGGATGGAGACCGGGGCAAACCCAATCGAATTC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGGAACCACTCGGAAGATaGCCCTGGGTCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQEPLGR*PWVPPA
Trigger: AGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTC...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGATCAGGAAGAGGTCTaGCCCAGTCCCATAGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPDQEEV*PSPIGG
Trigger: TCCACCTATGGGACTGGGGCAGACCTCTTCCTGATC...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGGGCTCTGCATGGATCAGGAAGAGGTCTaGCCCAGTCCCATAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PDLPRVGIDVEHVGGLCMDQEEV*PSPIGG
Trigger: TCCACCTATGGGACTGGGGCAGACCTCTTCCTGATC...CATGCAGAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGTTGTTGGGTTCCTCTaGATCCTCGTCTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQVVGFL*ILVYGL
Trigger: GAGGCCATAGACGAGGATGCAGAGGAACCCAACAAC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGGATTCTAGTCAGTGTTaGTCCACGTGGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQDSSQC*STWPGP
Trigger: GGGCCCTGGCCACGTGGAGCAACACTGACTAGAATC...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAATGTGAGTCACGGCAATaGCATCATCCAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQCESRQ*HHPVVA
Trigger: GGCTACCACTGGATGATGGCATTGCCGTGACTCACA...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTTCCATTCCTCTCCATaGAGCCCTGCCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRFHSSP*SPAWAC
Trigger: ACAAGCCCAGGCAGGGCTGCATGGAGAGGAATGGAA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTCTGCCCTTGCCGGGCTaGACTGGTAGGGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTLPLPG*TGRVGE
Trigger: CTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAG...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGACGGTGATCTTGAGGCCCCGCAGGATCTCTCCCTGGGGTGGGTGCTCATTCCCCTGTCAAGGGAGATaGACCCTGAAGTTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LTVILRPRRISPWGGCSFPCQGR*TLKFCT
Trigger: TGTGCAGAACTTCAGGGTGCATCTCCCTTGACAGGG...GAATGAGCACCCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCACCGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR GCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAGACACGGCTCGGATCTaGTCCTGCCGGCCGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPDTARI*SCRPPD
Trigger: GTCAGGCGGCCGGCAGGAGCAGATCCGAGCCGTGTC...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAATGTCAACGCCCAAATaGAGGCTGCCGGCTACACAG +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPMSTPK*RLPATQ
Trigger: CTGTGTAGCCGGCAGCCTGCATTTGGGCGTTGACAT...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGCCTCCATGTGGCACATaGCAGTCTCCTGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRPPCGT*QSPASF
Trigger: GAATGAGGCAGGAGACTGGCATGTGCCACATGGAGG...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCCCGGTCTCCATCCATaGCGACCACCTTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALPGLHP*RPPSVP
Trigger: AGGTACTGAAGGTGGTCGCCATGGATGGAGACCGGG...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGGTGGCCTGGGCAGCTaGGCTCCCCGCAGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHGGLGS*APRRAH
Trigger: ATGAGCCCTGCGGGGAGCCCAGCTGCCCAGGCCACC...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGACTGGGACGGTGGCCTaGGCAGCTGGGCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVTGTVA*AAGLPA
Trigger: TGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGT...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGATAAGCCCAGTGGATaGGTGGATCAGGAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQDKPSG*VDQEEV
Trigger: GACCTCTTCCTGATCCACCCATCCACTGGGCTTATC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CAGGGCATCCAGGGAGCGGATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAAGTCCACCAGGTTGTTaGGTTCCTCTGCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: QGIQGADGILEPDLPRVGSPPGC*VPLHPR
Trigger: ACGAGGATGCAGAGGAACCCAACAACCTGGTGGACT...TCCCACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGGTCCTCTGTCCCACGTaGGCATACCAGGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQVLCPT*AYQGPQ
Trigger: CTGTGGACCCTGGTATGCCCACGTGGGACAGAGGAC...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTTGTCTCTTCAAGGATaGCTGGTGGGGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRLSLQG*LVGQLL
Trigger: GAGGAGCTGCCCCACCAGCCATCCTTGAAGAGACAA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCCTTGGTCCAAGTTCCTaGGGTTGTCCAAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSLGPSS*GCPRDH
Trigger: GTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAAGATTGGCTCTGCCTTaGTCCAAGTTCCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQRLALP*SKFLGL
Trigger: CAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCT...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCACTGGCCTCACCCCACTaGCGGGGTCTCCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPLASPH*RGLLQC
Trigger: GCACTGGAGGAGACCCCGCCAGTGGGGTGAGGCCAG...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGTCCCAGCTCTTTCCCTaGAGGCCTACCATGGTGCCA +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQSQLFP*RPTMVP
Trigger: TGGCACCATGGTAGGCCTCCAGGGAAAGAGCTGGGA...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTTCTGGACCTACAGGTaGGTGGAAACATCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRFWTYR*VETSWG
Trigger: CCCCCAGGATGTTTCCACCCACCTGTAGGTCCAGAA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGCAGGTGGACTGGCCTTaGATTCCCTCAACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRQVDWP*IPSTPS
Trigger: TGAAGGCGTTGAGGGAATCCAAGGCCAGTCCACCTG...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 72 bp GGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTaGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GCPRDHPRSRIH*QAQASSLEVFR
Trigger: CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp ACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATaGGCTCTGCCTTGGTCCAAGTTCCTGGGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: TGHFPIHGQFAR*ALPWSKFLGLS
Trigger: GGACAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp ATAGAATGTTGGCGGGTGGTTGTTGAGGTCCACAATCCTGATGGTGACTGGGACGGGCCGGGCTCTGAGTaGTGGAGATGGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: IECWRVVVEVHNPDGDWDGPGSE*WRWLQM
Trigger: CATCTGGAGCCATCTCCATCACTCAGAGCCCGGCCC...GTCCCAGTCACCATCAGGATTGTGGACCTCAACAACCACCCGCCAACATTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR TCA 90 bp TCAGTCACCTGTACATGCAGCTCATACACCTCTCTCTGGAGCTGGGCCGGGCTCCCACCAGCTGCAAGTTaGATTTGGCATTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVTCTCSSYTSLWSWAGLPPAAS*IWHWLP
Trigger: AGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGG...GAGCCCGGCCCAGCTCCAGAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR TCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTGTAAGGCTGTGGTGCTaGAGGATGGGGAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTVRLWC*RMGSPG
Trigger: ACCGGGGCTCCCCATCCTTCAGCACCACAGCCTTAC...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGTGGTGCTCTTGGACTTaGGCCACTCAATGCGGATGG +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQWCSWT*ATQCGW
Trigger: CCATCCGCATTGAGTGGCTCAAGTCCAAGAGCACCA...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGAATGGATCCACCTGCTaGAGCAGCCAGGAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQNGSTC*SSQEAS
Trigger: ACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATT...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGTTTAGGACGCCTGTCTaGGAGACGACAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEFRTPV*ETTVLP
Trigger: GGGAAGCACTGTCGTCTCTCAGACAGGCGTCCTAAA...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCGGTCTCCTCCAGTGCTaGCAACACTTGCCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTGLLQC*QHLPVP
Trigger: AGGCACCGGCAAGTGTTGTCAGCACTGGAGGAGACC...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTCCATTTATTGTCCATaGGGCTACAGCTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWSIYCP*GYSSIL
Trigger: GAGAATGGAGCTGTAGCCTCATGGACAATAAATGGA...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCGAACCACTCGGAAGATaGCCCTGGGTCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAAEPLGR*PWVPPA
Trigger: AGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTC...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGCCAGGTGTGATGTTGTaGAGGGCATCCAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: EFLSQISPVWELMSNTLAPGVML*RASRER
Trigger: CCGCTCCCTGGATGCCCTGCACAACATCACACCTGG...CGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR GCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCCGACGGTGGCCATGGTaGCGGCCAGCACACCCACGG +
Preference number: 4 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVRRWPW*RPAHPR
Trigger: CCGTGGGTGTGCTGGCCGGCACCATGGCCACCGTCG...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCGCCCAGCACAGTGCCTaGTGGGGCGCTTGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPAQHSA*WGAWQS
Trigger: ACTCTGCCAAGCGCCCCAGCAGGCACTGTGCTGGGC...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCTCTGAGAGACGACAGTaGTTCCCAAGCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSSERRQ*FPSFHA
Trigger: GGCATGAAAGCTTGGGAAGCACTGTCGTCTCTCAGA...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACCATCCATGGCCAGTTTaGAAGATTGGCTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHHPWPV*KIGSAL
Trigger: CAAGGCAGAGCCAATCTTGCAAACTGGCCATGGATG...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCAGTGCTGACAACACTTaGCGGTGCCTTAAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSSADNT*RCLKFG
Trigger: GCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACT...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCGCCAGCCTGGAGCTCTaGCTGTCCTACTGGGACCTA +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATASLEL*LSYWDL
Trigger: TAGGTCCCAGTAGGACAGGCAGAGCTCCAGGCTGGC...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTAGTGCGGGGCGAAGTTaGCCTGAGCCAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTSAGRS*PEPSRG
Trigger: GCCTCTGCTTGGCTCAGGCCAACTTCGCCCCGCACT...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGATAAGCCCAGTGGATaGGTGGATCAGGAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPDKPSG*VDQEEV
Trigger: GACCTCTTCCTGATCCACCCATCCACTGGGCTTATC...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGGGCTCCAGATCTCCCCCGTGTaGGAATTGATGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: LEPDLPRVGIDVEHVGGLQISPV*ELMSNT
Trigger: CGTGTTCGACATCAATTCCCACACGGGGGAGATCTG...GAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAGGGAGCCCCGGTCCTTaGCCTGCACCTCTAGGGACC +
Preference number: 4 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRGSPGP*PAPLGT
Trigger: GGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCC...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCCTGCTGGGGCGCTTaGCAGAGTAGATGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVACWGA*QSRCEA
Trigger: AGCCTCACATCTACTCTGCCAAGCGCCCCAGCAGGC...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCATGCTGTATTCCCTGTaGAGGGCAAGCATGATCCAG +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSMLYSL*RASMIQ
Trigger: CTGGATCATGCTTGCCCTCCACAGGGAATACAGCAT...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGCCATGCAGCCCTGCCTaGGCTTGTCCTGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVPCSPA*ACPVWE
Trigger: CTCCCAAACAGGACAAGCCCAGGCAGGGCTGCATGG...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCCCATGCAGCCCTGCCTaGGCTTGTCCTGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATPCSPA*ACPVWE
Trigger: CTCCCAAACAGGACAAGCCCAGGCAGGGCTGCATGG...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGGTAGGGTGGGAGAGTaGGCAATTAATTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHGRVGE*AINSSS
Trigger: GGAGCTAGAATTAATTGCCCACTCTCCCACCCTACC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCGCCAGTTTGCAAGATTaGCTCTGCCTTGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSASLQD*LCLGPS
Trigger: ACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGC...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGTGGGTGGAAACATCCTaGGGGGTGAGGATGCATGGA +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQWVETS*GVRMHG
Trigger: TCCATGCATCCTCACCCCCCAGGATGTTTCCACCCA...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 72 bp CCTCCAGTGCTGACAACACTTGCCGGTGCCTTAAGTTaGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPVLTTLAGALS*AAPSSSFLVWL
Trigger: GAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp CTCCGGGAGAGGGTCTCAGCATCTGTGATGTCAATCTaGAGTAAGGCTGTGGTGCTGAAGGATGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LRERVSASVMSI*SKAVVLKDGEP
Trigger: GGGCTCCCCATCCTTCAGCACCACAGCCTTACTCAAGATTGACATCACAGATGCTGAGACCCTCTCCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR CAA 72 bp AAGATGCCCCTGGGTCCCACCAGCTGCAAGTTGAATTaGGCATTGGCTCCCTGGTCGGAGTCATTGACGGTG +
Preference number: 4 (lower is better)
Translates to: KMPLGPTSCKLN*ALAPWSESLTV
Trigger: CACCGTCAATGACTCCGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAGGGGCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
3UTR CAA 72 bp ACTCGGAAGATGCCCCTGGGTCCCACCAGCTGCAAGTaGAATTTGGCATTGGCTCCCTGGTCGGAGTCATTG +
Preference number: 4 (lower is better)
Translates to: TRKMPLGPTSCK*NLALAPWSESL
Trigger: CAATGACTCCGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAGGGGCATCTTCCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR TCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGACAGGGGCCATGTCCTaGACATCCTCCACATTGACC +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQTGAMS*TSSTLT
Trigger: GGTCAATGTGGAGGATGTTCAGGACATGGCCCCTGT...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTCCACCAGCTGCAAGTTaGATTTGGCATTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPPPAAS*IWHWLP
Trigger: AGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGG...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTCTCAAACTTTTGCTTaGGCTCAGAGATCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWSQTFA*AQRSEL
Trigger: CAACTCTGATCTCTGAGCTCAAGCAAAAGTTTGAGA...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGCAGGGCCCTGCTGCTTaGCTAAGGATGATGATGAGA +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQQGPAA*LRMMMR
Trigger: TCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTG...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGTCAGCAAACATAAATaGAAGCAGGGAGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQVSKHK*KQGAGD
Trigger: ATCCCCTGCTCCCTGCTTTCATTTATGTTTGCTGAC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGAGCCAGGAGGCAAGTTaGGCTTCACTGTGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQSQEAS*ASLCVR
Trigger: TCTGACACACAGTGAAGCTCAACTTGCCTCCTGGCT...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAAGCCATAGTAGGGTGTaGCCACGAAGACAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGSHSRV*PRRQGP
Trigger: TGGCCCCTGTCTTCGTGGGCACACCCTACTATGGCT...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAATCAGTCACCTGTACATaGAGCTCATACACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQSVTCT*SSYTSL
Trigger: GAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGA...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATTCAGTCACCTGTACATaGAGCTCATACACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ATACQQMPTPLAGGLALDSVTCT*SSYTSL
Trigger: GAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGA...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp GGGTCCCACCAGCTGCAAGTTGAATTTGGCATTGGCTCCCTGGTCGGAGTCATTTCTCCCTGGGGTGGGTaGTCATTCATGGACAGCTCA +
Preference number: 4 (lower is better)
Translates to: GSHQLQVEFGIGSLVGVISPWGG*SFMDSS
Trigger: TGAGCTGTCCATGAATGAGCACCCACCCCAGGGAGA...AATGACTCCGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR GCA 90 bp TCCGCTCTCTCCATAGAATGTTGGCGGGTGGTTGTTGAGGTCCACAATCCTGATGAACCACTCGGAAGATaGCCCTGGGTCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SALSIECWRVVVEVHNPDEPLGR*PWVPPA
Trigger: AGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTC...ATCAGGATTGTGGACCTCAACAACCACCCGCCAACATTCTATGGAGAGAGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR GCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCAGCTACGCTGTACTTaGCTTCCATGTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALQLRCT*LPCPLP
Trigger: AGGCAGAGGACATGGAAGGCAAGTACAGCGTAGCTG...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTCCAGGTGTGATGTTGTaGAGGGCATCCAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTPGVML*RASRER
Trigger: CCGCTCCCTGGATGCCCTGCACAACATCACACCTGG...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTCCCCGGTCCTTGGCCTaGACCTCTAGGGACCATAGG +
Preference number: 4 (lower is better)
Translates to: DGILEPDLPRVGIDVEHVPRSLA*TSRDHR
Trigger: CCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGG...AACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR GCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGTGGCCAGGGCCCTGCTaGTTGACTAAGGATGATGAT +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQWPGPC*LTKDDD
Trigger: ATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCA...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTACGTGGCCAGGGCCCTaGTGCTTGACTAAGGATGAT +
Preference number: 4 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPTWPGP*CLTKDD
Trigger: ATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGT...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTCAAGCCTGCCCAGTGTaGCATTCCTGCCTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTQACPV*HSCLPA
Trigger: AGCTGGGAGGCAGGAATGGCACACTGGGCAGGCTTG...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGGTCAGGATGTGCCACTaGCTGTCAACAGATGCCAAC +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQVRMCH*LSTDAN
Trigger: GTTGGCATCTGTTGACAGGCAGTGGCACATCCTGAC...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTGCGGTCCACGGCAAATaGGGAGTGCAGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTAVHGK*GVQVLQ
Trigger: CTGCAGAACCTGCACTCCCCATTTGCCGTGGACCGC...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCTCTCGTAGTCCAGAGTaGCCCCAGCCTGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITSRSPE*PQPGGA
Trigger: TGCGCCTCCAGGCTGGGGCCACTCTGGACTACGAGA...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCCCGGTCTCCATCCATaGCGACCACCTTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAAPGLHP*RPPSVP
Trigger: AGGTACTGAAGGTGGTCGCCATGGATGGAGACCGGG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTAATCCTGATGGTGACTaGGACGGTGGCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTNPDGD*DGGLGS
Trigger: GCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATT...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCCTGCACCTCTAGGGACCATAGGCAGTCCCTTCCAGGTGTGATGTTGTGCAGGCGTTCTCAGGAATCCTaGCAACGTAGTAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: ACTSRDHRQSLPGVMLCRRSQES*QRSRGS
Trigger: ACTCCCTCTACTACGTTGCCAGGATTCCTGAGAACG...CCTGCACAACATCACACCTGGAAGGGACTGCCTATGGTCCCTAGAGGTGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAAGCCCAGTGGATGGGTaGATCAGGAAGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGSPVDG*IRKRSA
Trigger: GGCAGACCTCTTCCTGATCCACCCATCCACTGGGCT...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCAGCCCAGTGGATGGGTaGATCAGGAAGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAASPVDG*IRKRSA
Trigger: GGCAGACCTCTTCCTGATCCACCCATCCACTGGGCT...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCTAGGGACCATAGGCAGTCCCTTCCAGGTGTGATGTTGTGCAGGGCATCCAGGCATAGAAGTTGTACCTaGCAGTGGCCTCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: SRDHRQSLPGVMLCRASRHRSCT*QWPQRP
Trigger: TGGACGCTGAGGCCACTGCCAGGTACAACTTCTATG...CCTGGATGCCCTGCACAACATCACACCTGGAAGGGACTGCCTATGGTCCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGAGTCCACCAGGTTGTTaGGTTCCTCTGCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALSPPGC*VPLHPR
Trigger: ACGAGGATGCAGAGGAACCCAACAACCTGGTGGACT...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCAGATCTCCCCCGTGTaGGAATTGATGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALQISPV*ELMSNT
Trigger: CGTGTTCGACATCAATTCCCACACGGGGGAGATCTG...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAGGGAGCCCCGGTCCTTaGCCTGCACCTCTAGGGACC +
Preference number: 4 (lower is better)
Translates to: ARSMLVGREVFSCFCKHRGSPGP*PAPLGT
Trigger: GGTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCC...TCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCGTAGGCACGGTCCACTaGGCTGCGCCAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVVGTVH*AAPVLG
Trigger: GCCCAGCACTGGCGCAGCCCAGTGGACCGTGCCTAC...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAGTCCGAGCAGCAGGGTaGTGGGGGTCAGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQVRAAG*WGSGAE
Trigger: CTCCGCCCCTGACCCCCACCACCCTGCTGCTCGGAC...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCCAGTGTTGCTCCACGTaGCCAGGGCCCTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPQCCST*PGPCCL
Trigger: CAAGCAGCAGGGCCCTGGCCACGTGGAGCAACACTG...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATATCTGCCCTCACTCTTaGCAAGATCAATCTTCCACC +
Preference number: 4 (lower is better)
Translates to: ATACQQMPTPLAGGLALDICPHS*QDQSST
Trigger: GGTGGAAGATTGATCTTGCCAAGAGTGAGGGCAGAT...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACAAAGACTTGGAGCTCTaGTTCTCTCTGACGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHKDLEL*FSLTVA
Trigger: AGCTACCGTCAGAGAGAACCAGAGCTCCAAGTCTTT...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCCTCAGTCTGGGCTCCTaGATTGCTCGAGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTLSLGS*IARVHL
Trigger: GAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAG...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTCTGGGGGTCGAAGAATaGATCCACCTGCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPLGVEE*IHLLKQ
Trigger: CTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAG...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCCCTGGAGGCCTACCATaGTGCCAGCCTGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITPGGLP*CQPGAL
Trigger: CAGAGCTCCAGGCTGGCACCATGGTAGGCCTCCAGG...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp CACGTTGGCGGGCTCTGCATGGGTGATGGAATAGTCCACCAGGTTGTTGGGTTCCTGCATCCTCGTCTATaGCTTGCCTTCCATGTCCTC +
Preference number: 4 (lower is better)
Translates to: HVGGLCMGDGIVHQVVGFLHPRL*LAFHVL
Trigger: GAGGACATGGAAGGCAAGCCATAGACGAGGATGCAG...GAACCCAACAACCTGGTGGACTATTCCATCACCCATGCAGAGCCCGCCAACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCAAGGGGTCCTCCATGTaGCACATGCCAGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATKGSSM*HMPVSC
Trigger: GCAGGAGACTGGCATGTGCCACATGGAGGACCCCTT...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 72 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTaGCCCAAGGCCCTGACTAGAGCCCTGTCAGAGCGC +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNV*PKALTRALSER
Trigger: GCGCTCTGACAGGGCTCTAGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp ATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATaGATGTCGAACACGTTGGCGGGCTCTGCATGGGTG +
Preference number: 4 (lower is better)
Translates to: MEFLSQISPVWE*MSNTLAGSAWV
Trigger: CACCCATGCAGAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR CAA 72 bp ATGTTGTGCAGGGCATCCAGGGAGCGGATGGAATTCTaGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCG +
Preference number: 4 (lower is better)
Translates to: MLCRASRERMEF*SQISPVWELMS
Trigger: CGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR CAA 72 bp TCTAGGGACCATAGGCAGTCCCTTCCAGGTGTGATGTaGTGCAGGGCATCCAGGGAGCGGATGGAATTCTTG +
Preference number: 4 (lower is better)
Translates to: SRDHRQSLPGVM*CRASRERMEFL
Trigger: CAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACATCACACCTGGAAGGGACTGCCTATGGTCCCTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
3UTR CAA 72 bp TCCATTCTCCCTCTCCATCCCTTGGTGGCCAAGGCCTaGAAGACTGTCAGGATGTGCCACTGCCTGTCAACA +
Preference number: 4 (lower is better)
Translates to: SILPLHPLVAKA*KTVRMCHCLST
Trigger: TGTTGACAGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGAGGGAGAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCTGTCCTCTGGGAGGCTaGACAGAGCCATGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTCPLGG*TEPCFR
Trigger: ACGGAAACATGGCTCTGTTCAGCCTCCCAGAGGACA...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCCATAAGGCTCCTGGATaGACCTGGGCGCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATHKAPG*TWAPHH
Trigger: ATGATGAGGCGCCCAGGTTCATCCAGGAGCCTTATG...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGACCGTGGTGGTGGCTaGGAACACCACATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHDRGGG*EHHISP
Trigger: GGGGCTGATGTGGTGTTCTCAGCCACCACCACGGTC...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGCCACCAGCTGCAAGTTaGATTTGGCATTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQPPAAS*IWHWLP
Trigger: AGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGG...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAAGTCCCTTCCAGGTGTaGTGTTGTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGSPFQV*CCAGHP
Trigger: TGGATGCCCTGCACAACATCACACCTGGAAGGGACT...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGGTAAGGCTGTGGTGCTaGAGGATGGGGAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: CSDLQAKQKKLGGAHETEVRLWC*RMGSPG
Trigger: ACCGGGGCTCCCCATCCTTCAGCACCACAGCCTTAC...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGGTCAATTCTCAGCCCTaGAGAATGGAGGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRVNSQP*RMEGIV
Trigger: TACAATGCCCTCCATTCTTCAGGGCTGAGAATTGAC...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTGATCCCAGTAGAACCTaGGGGACTGTGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTDPSRT*GTVRSG
Trigger: CCCAGACCTCACAGTCCCTCAGGTTCTACTGGGATC...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGAGAAGTAGAGGTGTGTaGGTCACGGCAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQRSRGV*VTAMPS
Trigger: TGATGGCATTGCCGTGACTCACACACCTCTACTTCT...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGAGAAGTAGAGGTGTGTaGGTCACGGCAATGCCATCA +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALRSRGV*VTAMPS
Trigger: TGATGGCATTGCCGTGACTCACACACCTCTACTTCT...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGAGCACAGTCCTCTCCTaGAACACAGGCTGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALSTVLS*NTGWKV
Trigger: TACTTTCCAGCCTGTGTTTCAGGAGAGGACTGTGCT...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCTTTAGGACGCCTGTCTaGGAGACGACAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTFRTPV*ETTVLP
Trigger: GGGAAGCACTGTCGTCTCTCAGACAGGCGTCCTAAA...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp CGCAGGGCTCATTTCAGTCACCTGTACATGCAGCTCATACACCTCTCTCTGGAGAAGGGAGATGCACCCTaGAGTTCTGCACAGGACCAC +
Preference number: 4 (lower is better)
Translates to: RRAHFSHLYMQLIHLSLEKGDAP*SSAQDH
Trigger: GTGGTCCTGTGCAGAACTTCAGGGTGCATCTCCCTT...CTCCAGAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGAAATGAGCCCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR TCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTACTTGCTTTTAAAATaGAGACTCCCTAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHYLLLK*RLPRPR
Trigger: CCTGGGCCTAGGGAGTCTTCATTTTAAAAGCAAGTA...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp AGGGGAGAGCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAGCCATAGTAGGGTGTaGCCACGAAGACAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RGEPGACWWVGKYSVASVSHSRV*PRRQGP
Trigger: TGGCCCCTGTCTTCGTGGGCACACCCTACTATGGCT...TACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGCTCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCTGGGTCCCACCAGCTaGAAGTTGAATTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALLGPTS*KLNLAL
Trigger: CAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAG...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CGGATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGCACGTTGGCGGGCTCTaGATGGGTGATGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: RMEFLSQISPVWELMSNTHVGGL*MGDGIV
Trigger: GACTATTCCATCACCCATGCAGAGCCCGCCAACGTG...CGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR GCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCCACGTTGGCGGGCTCTaGATGGGTGATGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATHVGGL*MGDGIV
Trigger: GACTATTCCATCACCCATGCAGAGCCCGCCAACGTG...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCCCCGGTCCTTGGCCTaGACCTCTAGGGACCATAGG +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVPRSLA*TSRDHR
Trigger: CCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGG...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGACGTATTTGCCAATTaGATCCTAGAGCCCAATGTC +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQDVFAN*ILEPNV
Trigger: GACATTGGGCTCTAGGATGCAATTGGCAAATACGTC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTGCTCCTGCTCTCAGCTaGAGGCGTCAGGATCCAGAT +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTAPALS*RRQDPD
Trigger: ATCTGGATCCTGACGCCTGCAGCTGAGAGCAGGAGC...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGATCCTTTTCCTGCTCCTaGTCTCAGCTGCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGSFSCS*SQLQAS
Trigger: TGACGCCTGCAGCTGAGAGCAGGAGCAGGAAAAGGA...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGAGGGTCCACAGTCTCTaGCCAGACAGAATGCTCTAT +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALRVHSL*PDRMLY
Trigger: ATAGAGCATTCTGTCTGGGCAGAGACTGTGGACCCT...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCCAGCTTTGACATTTTaGGGCTCAGGGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAAPALTF*GSGQSW
Trigger: CCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCGGCCTGCAAATGTCCTaGTGTTCAAGATATCTGCAT +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSGLQMS*CSRYLH
Trigger: ATGCAGATATCTTGAACAGCAGGACATTTGCAGGCC...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTCTCTCCATGCAGCCCTaGCTGGGCTTGTCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTLSMQP*LGLSCL
Trigger: CAAACAGGACAAGCCCAGGCAGGGCTGCATGGAGAG...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCTTCCATTCCTCTCCATaGAGCCCTGCCTGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAAFHSSP*SPAWAC
Trigger: ACAAGCCCAGGCAGGGCTGCATGGAGAGGAATGGAA...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTGCTTGAGGACAGAGTaGCACAAGTTCTTAGAGACC +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRCLRTE*HKFLET
Trigger: GGTCTCTAAGAACTTGTGGCACTCTGTCCTCAAGCA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TGTCACCATCATGAAATAGCCTGGGCTACCATGAAGGTGAGAGTGGATGTTCAGAGTGCGGGGCGAAGTTaGCCTGAGCCAAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: CHHHEIAWATMKVRVDVQSAGRS*PEPSRG
Trigger: GCCTCTGCTTGGCTCAGGCCAACTTCGCCCCGCACT...CTGAACATCCACTCTCACCTTCATGGTAGCCCAGGCTATTTCATGATGGTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCCGCAGCACACCGCTGTaGCGGTCCACGGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVRSTPL*RSTANG
Trigger: CCCATTTGCCGTGGACCGCCACAGCGGTGTGCTGCG...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp CCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAAGAGTGGCCCCAGCCTaGAGGCGCAGCACACCGCTG +
Preference number: 4 (lower is better)
Translates to: PGACWWVGKYSVASVNIERVAPA*RRSTPL
Trigger: CAGCGGTGTGCTGCGCCTCCAGGCTGGGGCCACTCT...TTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGTCTCGTAGTCCAGAGTaGCCCCAGCCTGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHESRSPE*PQPGGA
Trigger: TGCGCCTCCAGGCTGGGGCCACTCTGGACTACGAGA...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAATCCTGATGGTGACTaGGACGGTGGCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPNPDGD*DGGLGS
Trigger: GCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATT...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TGGGCAGCTGGGCTCCCCGCAGGGCTCATTTCAGTCACCTGTACATGCAGCTCAGTGGGTGCTCATTCATaGACAGCTCAAACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: WAAGLPAGLISVTCTCSSVGAHS*TAQTCF
Trigger: AAAACAGGTTTGAGCTGTCCATGAATGAGCACCCAC...TGAGCTGCATGTACAGGTGACTGAAATGAGCCCTGCGGGGAGCCCAGCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGTGTGGTGCTGAAGGATaGGGAGCCCCGGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVCGAEG*GAPVLG
Trigger: GCCAAGGACCGGGGCTCCCCATCCTTCAGCACCACA...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGGAGATCAGAGTTGACTaGACGGGGCTTCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQEIRVD*TGLPIV
Trigger: AACTATGGGAAGCCCCGTCCAGTCAACTCTGATCTC...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGGTAGGGTGGGAGAGTaGGCAATTAATTCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPGRVGE*AINSSS
Trigger: GGAGCTAGAATTAATTGCCCACTCTCCCACCCTACC...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGATCCTCTTTCCTAGTGTaGCTCATGCTGGCTACCGGG +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGSSFLV*LMLATG
Trigger: CCCGGTAGCCAGCATGAGCCACACTAGGAAAGAGGA...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACTCTCTTTCAGGACATaGTGTTCTAGTATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPLSFRT*CSSMWA
Trigger: GGCCCACATACTAGAACACCATGTCCTGAAAGAGAG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 72 bp CTAGTTGCCTTTAGGGCTACCTCTATAGCTCCAGCTTaGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LVAFRATSIAPA*TFCGSGQSWLE
Trigger: CTCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTAGCCCTAAAGGCAACTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp CTGGAAACTAGGCCCTTCAGAGAACCCCTCCCTAGGTaGTTTGTGAGTTTCCTAAGGGGTCCTCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: LETRPFREPLPR*FVSFLRGPPCG
Trigger: GCCACATGGAGGACCCCTTAGGAAACTCACAAACAACCTAGGGAGGGGTTCTCTGAAGGGCCTAGTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACCTTGGCGACCACGGTaGTGTAGTGGGTCCGGGACC +
Preference number: 4 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKPWRPR*CSGSGT
Trigger: GGTCCCGGACCCACTACATCACCGTGGTCGCCAAGG...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp GCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAGCTGGGCCGGGCTCTaGGTGATGGAGATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ARSMLVGREVFSCFCKHRSWAGL*VMEMAP
Trigger: TGGAGCCATCTCCATCACTCAGAGCCCGGCCCAGCT...TCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp ATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGCGGGCTCTGCATGGGTaGTGGAATAGTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: MEFLSQISPVWELMSNTLRALHG*WNSPPG
Trigger: ACCTGGTGGACTATTCCATCACCCATGCAGAGCCCG...CAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR TCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGCCCCCGTGTGGGAATTaGTGTCGAACACGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMPPCGN*CRTRWR
Trigger: CCGCCAACGTGTTCGACATCAATTCCCACACGGGGG...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGCTCAGAGAGCAGCCCTaGTGCTCTTCTAGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVLREQP*CSSSCL
Trigger: AAGGCAACTAGAAGAGCATCAGGGCTGCTCTCTGAG...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGTCAGCAAACATAAATaGAAGCAGGGAGCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPVSKHK*KQGAGD
Trigger: ATCCCCTGCTCCCTGCTTTCATTTATGTTTGCTGAC...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCGCAAATGCCTTTGATTaGGGAGACATTTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: AFLQPTRFADLQPETVLSANAFD*GDICKQ
Trigger: CTGCTTACAAATGTCTCCTCAATCAAAGGCATTTGC...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCCCATGTTTCCGTTGGTaGTGCCGACCCCGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPPCFRW*CRPRCR
Trigger: TCGACAACGGGGTCGGCAGCACCAACGGAAACATGG...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAGCCATAGTAGGGTGTaGCCACGAAGACAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPSHSRV*PRRQGP
Trigger: TGGCCCCTGTCTTCGTGGGCACACCCTACTATGGCT...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp AGGGGAGAGCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTACACGTTGGCGGGCTCTaGATGGGTGATGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: RGEPGACWWVGKYSVASVHVGGL*MGDGIV
Trigger: GACTATTCCATCACCCATGCAGAGCCCGCCAACGTG...TACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGCTCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGCCAGGTGTGATGTTGTaGAGGGCATCCAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMPGVML*RASRER
Trigger: CCGCTCCCTGGATGCCCTGCACAACATCACACCTGG...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR GCA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACCAGGTGTGATGTTGTaGAGGGCATCCAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRPGVML*RASRER
Trigger: CCGCTCCCTGGATGCCCTGCACAACATCACACCTGG...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR GCA 90 bp GCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGACCCCGGTCCTTGGCCTaGACCTCTAGGGACCATAGG +
Preference number: 4 (lower is better)
Translates to: ARSMLVGREVFSCFCKHRPRSLA*TSRDHR
Trigger: CCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGG...TCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGACTGGGCTGCGCCAGTaGTGGGCGCCACGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTTGLRQ*WAPRWV
Trigger: CACCCAGCGTGGCGCCCAGCACTGGCGCAGCCCAGT...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCTCTATCTTTCCAAATaGATCCTGGCACAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALLYLSK*ILAQSH
Trigger: GTGGGACTGTGCCAGGATGCATTTGGAAAGATAGAG...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGACTTTCTGGAAGAGCTaGACCCACAGAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVTFWKS*THRTGL
Trigger: CAGCCCAGTTCTGTGGGTGCAGCTCTTCCAGAAAGT...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCACTTTCTGGAAGAGCTaGACCCACAGAACTGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAATFWKS*THRTGL
Trigger: CAGCCCAGTTCTGTGGGTGCAGCTCTTCCAGAAAGT...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCTGTGAGTCACGGCAATaGCATCATCCAGTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATCESRQ*HHPVVA
Trigger: GGCTACCACTGGATGATGGCATTGCCGTGACTCACA...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTTCTGGGCTCCTGGATTaGTCGAGTCCACCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTSGLLD*SSPPLA
Trigger: AGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGA...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCCTTAAGTTTGGCTaGACCCTCCTCCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQCLKFG*TLLLFP
Trigger: AGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCA...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCGACAACACTTGCCGGTaGCTTAAGTTTGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATDNTCR*LKFGCT
Trigger: GGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTC...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGGCGGTCCACGGCAAATaGGGAGTGCAGGTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMAVHGK*GVQVLQ
Trigger: CTGCAGAACCTGCACTCCCCATTTGCCGTGGACCGC...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TCGGAAGATGCCCCTGGGTCCCACCAGCTGCAAGTTGAATTTGGCATTGGCTCCTGTAGAGAATTCGATTaGGTTTGCCCCGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SEDAPGSHQLQVEFGIGSCREFD*VCPGLH
Trigger: ATGGAGACCGGGGCAAACCCAATCGAATTCTCTACA...GGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAGGGGCATCTTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGACTGGGACGGTGGCCTaGGCAGCTGGGCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTTGTVA*AAGLPA
Trigger: TGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGT...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TGTCACCATCATGAAATAGCCTGGGCTACCATGAAGGTGAGAGTGGATGTTCAGAATCCTGATGGTGACTaGGACGGTGGCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CHHHEIAWATMKVRVDVQNPDGD*DGGLGS
Trigger: GCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATT...CTGAACATCCACTCTCACCTTCATGGTAGCCCAGGCTATTTCATGATGGTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTCTCTCCATAGAATGTTaGCGGGTGGTTGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPLSIEC*RVVVEV
Trigger: GACCTCAACAACCACCCGCCAACATTCTATGGAGAG...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ACTTGGGCTTCATTCAGGACTGTCTGTGGAACCACTCGGAAGATGCCCCTGGGTATTCAGGACTGTCTGTaGAACCACTCGGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: TWASFRTVCGTTRKMPLGIQDCL*NHSEDA
Trigger: GGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAAT...ACCCAGGGGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp ATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATGTCAATCTTGAGTAAGGCTTTGGTGTCCAGGAGCTaGATCACAACATCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: MGLRERVSASVMSILSKALVSRS*ITTSAV
Trigger: CACAGCGGATGTTGTGATCCAGCTCCTGGACACCAA...AGCCTTACTCAAGATTGACATCACAGATGCTGAGACCCTCTCCCGGAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCCCCCAGTCCCATAGGTaGAATATTTCACTTCGCCCC +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATPQSHR*NISLRP
Trigger: GGGGCGAAGTGAAATATTCCACCTATGGGACTGGGG...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTAGCCCAGTGGATGGGTaGATCAGGAAGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: DGILEPDLPRVGIDVEHVSPVDG*IRKRSA
Trigger: GGCAGACCTCTTCCTGATCCACCCATCCACTGGGCT...AACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCAGTCCACCAGGTTGTTaGGTTCCTCTGCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTSPPGC*VPLHPR
Trigger: ACGAGGATGCAGAGGAACCCAACAACCTGGTGGACT...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGACAGATCTCCCCCGTGTaGGAATTGATGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGQISPV*ELMSNT
Trigger: CGTGTTCGACATCAATTCCCACACGGGGGAGATCTG...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGACTGGGATGGGTGAGCTaGCTTCTCGTCAATTCTCAG +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGLGWVS*LLVNSQ
Trigger: CTGAGAATTGACGAGAAGCCAGCTCACCCATCCCAG...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGTTTCCAAATGCATCCTaGCACAGTCCCACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALFPNAS*HSPTVS
Trigger: ACTGACTGTGGGACTGTGCCAGGATGCATTTGGAAA...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCCTCTTCAAGGATGGCTaGTGGGGCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPLFKDG*WGSSSE
Trigger: CTCTGAGGAGCTGCCCCACCAGCCATCCTTGAAGAG...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTCTGGGGGTCGAAGAATaGATCCACCTGCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTLGVEE*IHLLKQ
Trigger: CTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAG...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTTGGGCTTGTCCTGTTTaGGAGAAAAGTCCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPWACPV*EKSPVD
Trigger: GTCTACTGGACTTTTCTCCCAAACAGGACAAGCCCA...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCTGCACTGGTAGGGTaGGAGAGTGGGCAATTAATT +
Preference number: 4 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPAALVG*ESGQLI
Trigger: AATTAATTGCCCACTCTCCCACCCTACCAGTGCAGC...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAACACAGGGACTTGGCTaGCCTCACCCCACTGGCGGG +
Preference number: 4 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKTQGLG*PHPTGG
Trigger: CCCGCCAGTGGGGTGAGGCCAGCCAAGTCCCTGTGT...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAGGGGGTGAGGATGCATaGAGGGGGTCCTCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPGGEDA*RGSSLS
Trigger: TGAAAGAGAGGACCCCCTCCATGCATCCTCACCCCC...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 72 bp GTTTTCTGTGCATCCTTGCTCTCCCCTTACCTACATTaGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCC +
Preference number: 4 (lower is better)
Translates to: VFCASLLSPYLH*LSYSPRGSLTS
Trigger: GGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAGGTAAGGGGAGAGCAAGGATGCACAGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp CACATCTCAGCCCTGATATTCATCAACTGCCCTGAATaGTCTCTTCAAGGATGGCTGGTGGGGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: HISALIFINCPE*SLQGWLVGQLL
Trigger: GAGGAGCTGCCCCACCAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGATGAATATCAGGGCTGAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp GAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTaGAGCTTCACTGTGTGTCAGAAAGACTGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: EWIHLLKQPGGK*SFTVCQKDWSP
Trigger: TGGAGACCAGTCTTTCTGACACACAGTGAAGCTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACGGGGCGAAGTTGGCCTaGGCCAAGCAGAGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNGAKLA*AKQRRS
Trigger: GCTGCGCCTCTGCTTGGCTCAGGCCAACTTCGCCCC...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACCACATCAGCCCCATaGAGCCTCCCACCGCCATCC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQTTSAP*SLPPPS
Trigger: GGATGGCGGTGGGAGGCTTCATGGGGCTGATGTGGT...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAGACCGTGGTGGTGGCTaGGAACACCACATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQDRGGG*EHHISP
Trigger: GGGGCTGATGTGGTGTTCTCAGCCACCACCACGGTC...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCACAGGGGCCATGTCCTaGACATCCTCCACATTGACC +
Preference number: 4 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITTGAMS*TSSTLT
Trigger: GGTCAATGTGGAGGATGTTCAGGACATGGCCCCTGT...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp AGGGGAGAGCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTACATCCGCTGTGGAACTaGACTTCTCTGGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: RGEPGACWWVGKYSVASVHPLWN*TSLGCS
Trigger: TGAACACCCCAGAGAAGTTCAGTTCCACAGCGGATG...TACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGCTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATCGGGCTCTGCATGGGTaGTGGAATAGTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHRALHG*WNSPPG
Trigger: ACCTGGTGGACTATTCCATCACCCATGCAGAGCCCG...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAAGCGGATGGAATTCTTaGGCCAGATCTCCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPSGWNS*ARSPPC
Trigger: ACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCT...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGGCTTGGTGGTGCACATaGGACAGAGGGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMAWWCT*DRGVRM
Trigger: CATCCTGACCCCTCTGTCTCATGTGCACCACCAAGC...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGGCTTGGTGGTGCACATaGGACAGAGGGGTCAGGATG +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVAWWCT*DRGVRM
Trigger: CATCCTGACCCCTCTGTCTCATGTGCACCACCAAGC...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGCTGGATCCACAGCCTTaGAGGTTAATACTTTGGACT +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVELDPQP*RLILWT
Trigger: AGTCCAAAGTATTAACCTTCAAGGCTGTGGATCCAG...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372117.6
CDS-3UTR TCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTCAGGGCCCTGCTGCTTaGCTAAGGATGATGATGAGA +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTQGPAA*LRMMMR
Trigger: TCTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTG...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCAGCTGCAGGCGTCAGGATCCAGATTCTAGTCAGTGTTGCTCCACGTGGCCAGTCCATTTATTGTCCATaGGGCTACAGCTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: SAAGVRIQILVSVAPRGQSIYCP*GYSSIL
Trigger: GAGAATGGAGCTGTAGCCTCATGGACAATAAATGGA...CTGGCCACGTGGAGCAACACTGACTAGAATCTGGATCCTGACGCCTGCAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGCTACTCTGCTTTATTaGTCAAATGATGGTCGCTTA +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHATLLY*SNDGRL
Trigger: TAAGCGACCATCATTTGATCAATAAAGCAGAGTAGC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCATGTTTCCGTTGGTGCTaGCGACCCCGTTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPCFRWC*RPRCRR
Trigger: TCTTCGACAACGGGGTCGGCAGCACCAACGGAAACA...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGCCATGTTTCCGTTGGTaGTGCCGACCCCGTTGTCGA +
Preference number: 4 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHEPCFRW*CRPRCR
Trigger: TCGACAACGGGGTCGGCAGCACCAACGGAAACATGG...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCATCTCCCTGGGGTGGGTaGTCATTCATGGACAGCTCA +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPSPWGG*SFMDSS
Trigger: TGAGCTGTCCATGAATGAGCACCCACCCCAGGGAGA...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp AGGGGAGAGCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTACAGCTACGCTGTACTTaGCTTCCATGTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RGEPGACWWVGKYSVASVQLRCT*LPCPLP
Trigger: AGGCAGAGGACATGGAAGGCAAGTACAGCGTAGCTG...TACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGCTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACACTTTTCTCTCTCTGTaGACACATGTAGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHTFLSL*THVDFL
Trigger: CAGGAAATCTACATGTGTGCACAGAGAGAGAAAAGT...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCTGCCTTAAGTTTGGCTaGACCCTCCTCCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAACLKFG*TLLLFP
Trigger: AGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCA...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GTGGGAATTGATGTCGAACACGTTGGCGGGCTCTGCATGGGTGATGGAATAGTCGTTGTTGGGTTCCTCTaGATCCTCGTCTATGGCTTG +
Preference number: 4 (lower is better)
Translates to: VGIDVEHVGGLCMGDGIVVVGFL*ILVYGL
Trigger: CAAGCCATAGACGAGGATGCAGAGGAACCCAACAAC...GACTATTCCATCACCCATGCAGAGCCCGCCAACGTGTTCGACATCAATTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR GCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGAAGACTGTCAGGATGTaGCACTGCCTGTCAACAGAT +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQKTVRM*HCLSTD
Trigger: ATCTGTTGACAGGCAGTGGCACATCCTGACAGTCTT...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGGAGCCATGTTTCCGTTaGTGCTGCCGACCCCGTTGT +
Preference number: 4 (lower is better)
Translates to: DVQTFKPSKRSLVVHMRQEPCFR*CCRPRC
Trigger: ACAACGGGGTCGGCAGCACCAACGGAAACATGGCTC...CTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCTGGGCGCCTCATCATTaGCATCGGTCACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITWAPHH*HRSPGS
Trigger: TGATCCTGGTGACCGATGCCAATGATGAGGCGCCCA...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTTGTAGAGAATTCGATTaGGTTTGCCCCGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPCREFD*VCPGLH
Trigger: ATGGAGACCGGGGCAAACCCAATCGAATTCTCTACA...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GTGATGGAGATGGCTCCAGATGTCTCATTAATTTCAAAGGCTCCATCGTTCCCTAATCCTGATGGTGACTaGGACGGTGGCCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VMEMAPDVSLISKAPSFPNPDGD*DGGLGS
Trigger: GCTGCCCAGGCCACCGTCCCAGTCACCATCAGGATT...AGGGAACGATGGAGCCTTTGAAATTAATGAGACATCTGGAGCCATCTCCATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGGTGGGTGCTCATTCATaGACAGCTCAAACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: MLATGHFPIHGQFARLALVGAHS*TAQTCF
Trigger: AAAACAGGTTTGAGCTGTCCATGAATGAGCACCCAC...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTCCACAATGATTGTGACTTGGGCTTCATTCAGGACTGTCTGTGGAACCACTCGTTGGCATTGGCTCCCTaGTCGGAGTCATTGACGGTG +
Preference number: 4 (lower is better)
Translates to: LHNDCDLGFIQDCLWNHSLALAP*SESLTV
Trigger: CACCGTCAATGACTCCGACCAGGGAGCCAATGCCAA...CGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGTCACAATCATTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGATTCAGGACTGTCTGTaGAACCACTCGGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVIQDCL*NHSEDA
Trigger: GGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAAT...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TTTGGCATTGGCTCCCTGGTCGGAGTCATTGACGGTGATCTTGAGGCCCCGCAGACAATGATTGTGACTTaGGCTTCATTCAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: FGIGSLVGVIDGDLEAPQTMIVT*ASFRTV
Trigger: GACAGTCCTGAATGAAGCCCAAGTCACAATCATTGT...CTGCGGGGCCTCAAGATCACCGTCAATGACTCCGACCAGGGAGCCAATGCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp GGTGATCTTGAGGCCCCGCAGGATCTCTCCCTGGGGTGGGTGCTCATTCATGGAACTTTTCAAAGTCAATaGCAGCTGAGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: GDLEAPQDLSLGWVLIHGTFQSQ*QLSSPQ
Trigger: TTGTGGAGAACTCAGCTGCCATTGACTTTGAAAAGT...TCCATGAATGAGCACCCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp GGGCTCCGGGAGAGGGTCTCAGCATCTGTGATGTCAATCTTGAGTAAGGCTGTGAGAGGGAGTCGAACTTaGGGACATTGTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: GLRERVSASVMSILSKAVRGSRT*GHCHWC
Trigger: ACACCAATGACAATGTCCCCAAGTTCGACTCCCTCT...CACAGCCTTACTCAAGATTGACATCACAGATGCTGAGACCCTCTCCCGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAGCCCAGTGGATGGGTaGATCAGGAAGAGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHESPVDG*IRKRSA
Trigger: GGCAGACCTCTTCCTGATCCACCCATCCACTGGGCT...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTTGTGGTGCTGAAGGATaGGGAGCCCCGGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPCGAEG*GAPVLG
Trigger: GCCAAGGACCGGGGCTCCCCATCCTTCAGCACCACA...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGTCATGGGGTTGTCCTTaGTCTGTATCAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVSWGCP*SVSGRQ
Trigger: CTGCCTTCCTGATACAGACCAAGGACAACCCCATGA...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGCTTATTTGCTCAGTCTaGGCTCCTGGATTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVLICSV*APGLLE
Trigger: CTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAG...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTAGATTGGCTCTGCCTTaGTCCAAGTTCCTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTRLALP*SKFLGL
Trigger: CAACCCCAGGAACTTGGACCAAGGCAGAGCCAATCT...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTAGAAGCAGAGCATGGTaGCTCCTTCCCAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTRSRAW*LLPSSD
Trigger: ATCAGAGCTGGGAAGGAGCCACCATGCTCTGCTTCT...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGTGTCCTCTGGGAGGCTaGACAGAGCCATGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHECPLGG*TEPCFR
Trigger: ACGGAAACATGGCTCTGTTCAGCCTCCCAGAGGACA...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTCCTTGGCGACCACGGTaGTGTAGTGGGTCCGGGACC +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEIPWRPR*CSGSGT
Trigger: GGTCCCGGACCCACTACATCACCGTGGTCGCCAAGG...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp GAGAGGGTCTCAGCATCTGTGATGTCAATCTTGAGTAAGGCTGTGGTGCTGAAGCATCCGCTGTGGAACTaGACTTCTCTGGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: ERVSASVMSILSKAVVLKHPLWN*TSLGCS
Trigger: TGAACACCCCAGAGAAGTTCAGTTCCACAGCGGATG...CTTCAGCACCACAGCCTTACTCAAGATTGACATCACAGATGCTGAGACCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR TCA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAGCGGATGGAATTCTTaGGCCAGATCTCCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHESGWNS*ARSPPC
Trigger: ACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCT...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGAGCGGATGGAATTCTTaGGCCAGATCTCCCCCGTGT +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVSGWNS*ARSPPC
Trigger: ACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCT...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGTCCCTTCCAGGTGTaGTGTTGTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMSPFQV*CCAGHP
Trigger: TGGATGCCCTGCACAACATCACACCTGGAAGGGACT...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAAGTCCCTTCCAGGTGTaGTGTTGTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRSPFQV*CCAGHP
Trigger: TGGATGCCCTGCACAACATCACACCTGGAAGGGACT...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCGATCCCAGTAGAACCTaGGGGACTGTGAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVDPSRT*GTVRSG
Trigger: CCCAGACCTCACAGTCCCTCAGGTTCTACTGGGATC...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTAGCACAGTCCTCTCCTaGAACACAGGCTGGAAAGTA +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTSTVLS*NTGWKV
Trigger: TACTTTCCAGCCTGTGTTTCAGGAGAGGACTGTGCT...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAGGGCGCTAAGAGGATaGCACGGCTCGGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQRALRG*HGSDLL
Trigger: GAGCAGATCCGAGCCGTGTCATCCTCTTAGCGCCCT...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGTGTTTCCGTTGGTGCTaGCGACCCCGTTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVCFRWC*RPRCRR
Trigger: TCTTCGACAACGGGGTCGGCAGCACCAACGGAAACA...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp CGCAGGGCTCATTTCAGTCACCTGTACATGCAGCTCATACACCTCTCTCTGGAGTCAGTCACCTGTACATaGAGCTCATACACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RRAHFSHLYMQLIHLSLESVTCT*SSYTSL
Trigger: GAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGA...CTCCAGAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGAAATGAGCCCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR GCA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGATCTCCCTGGGGTGGGTaGTCATTCATGGACAGCTCA +
Preference number: 4 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRSPWGG*SFMDSS
Trigger: TGAGCTGTCCATGAATGAGCACCCACCCCAGGGAGA...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp TCCGCTCTCTCCATAGAATGTTGGCGGGTGGTTGTTGAGGTCCACAATCCTGATCTGGGTCCCACCAGCTaGAAGTTGAATTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SALSIECWRVVVEVHNPDLGPTS*KLNLAL
Trigger: CAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAG...ATCAGGATTGTGGACCTCAACAACCACCCGCCAACATTCTATGGAGAGAGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR GCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGGATCAGGAAGAGGTCTaGCCCAGTCCCATAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMDQEEV*PSPIGG
Trigger: TCCACCTATGGGACTGGGGCAGACCTCTTCCTGATC...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCTCTATCTTTCCAAATaGATCCTGGCACAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAALYLSK*ILAQSH
Trigger: GTGGGACTGTGCCAGGATGCATTTGGAAAGATAGAG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTAGGGTCCACAGTCTCTaGCCAGACAGAATGCTCTAT +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTRVHSL*PDRMLY
Trigger: ATAGAGCATTCTGTCTGGGCAGAGACTGTGGACCCT...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAACTGATATTCATCAACTaGCCTGAATTGTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQLIFIN*PELSLQ
Trigger: TTGAAGAGACAATTCAGGGCAGTTGATGAATATCAG...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTGCAGAAAAATACTTTaGATTCATGCCGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRCRKIL*IHAALH
Trigger: GTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTTCTGAGAGACGACAGTaGTTCCCAAGCTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTSERRQ*FPSFHA
Trigger: GGCATGAAAGCTTGGGAAGCACTGTCGTCTCTCAGA...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTTTGCAAGATTGGCTCTaGCTTGGTCCAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTLQDWL*LGPSSW
Trigger: CCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAA...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTTCTTTTCATCCTCTCTaGAACCATACTTTGCACCCT +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPSFHPL*NHTLHP
Trigger: AGGGTGCAAAGTATGGTTGCAGAGAGGATGAAAAGA...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGTGGGCGCCTCATCATTaGCATCGGTCACCAGGATCA +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMWAPHH*HRSPGS
Trigger: TGATCCTGGTGACCGATGCCAATGATGAGGCGCCCA...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTACTGGGACGGTGGCCTaGGCAGCTGGGCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSTGTVA*AAGLPA
Trigger: TGCGGGGAGCCCAGCTGCCCAGGCCACCGTCCCAGT...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ATAGAATGTTGGCGGGTGGTTGTTGAGGTCCACAATCCTGATGGTGACTGGGACCTCTCCATAGAATGTTaGCGGGTGGTTGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: IECWRVVVEVHNPDGDWDLSIEC*RVVVEV
Trigger: GACCTCAACAACCACCCGCCAACATTCTATGGAGAG...GTCCCAGTCACCATCAGGATTGTGGACCTCAACAACCACCCGCCAACATTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTACAATGATTGTGACTTaGGCTTCATTCAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPTMIVT*ASFRTV
Trigger: GACAGTCCTGAATGAAGCCCAAGTCACAATCATTGT...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAACTTTTCAAAGTCAATaGCAGCTGAGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPTFQSQ*QLSSPQ
Trigger: TTGTGGAGAACTCAGCTGCCATTGACTTTGAAAAGT...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGATAAGCCCAGTGGATaGGTGGATCAGGAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: MEFLSQISPVWELMSNTLDKPSG*VDQEEV
Trigger: GACCTCTTCCTGATCCACCCATCCACTGGGCTTATC...CAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTTCATGGGGTTGTCCTTaGTCTGTATCAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTSWGCP*SVSGRQ
Trigger: CTGCCTTCCTGATACAGACCAAGGACAACCCCATGA...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAAAAGACTTGGAGCTCTaGTTCTCTCTGACGGTAGCT +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGKDLEL*FSLTVA
Trigger: AGCTACCGTCAGAGAGAACCAGAGCTCCAAGTCTTT...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTAGCAGGGGATCAGCATaGCCTTTGGGTAACAGACTT +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTSRGSA*PLGNRL
Trigger: AAGTCTGTTACCCAAAGGCCATGCTGATCCCCTGCT...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCGTGTGTCAGAAAGACTaGTCTCCACAGGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATVCQKD*SPQVSK
Trigger: TTTGCTGACCTGTGGAGACCAGTCTTTCTGACACAC...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCACTTGGTCCAAGTTCCTaGGGTTGTCCAAGAGACCAC +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPLGPSS*GCPRDH
Trigger: GTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTGCCAGTTTGCAAGATTaGCTCTGCCTTGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTASLQD*LCLGPS
Trigger: ACTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGC...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTTGGTGTTCTAGTATGTaGGCCACAGTCACGGCAAGT +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTWCSSM*ATVTAS
Trigger: ACTTGCCGTGACTGTGGCCCACATACTAGAACACCA...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTTCCTCCACTCCCCTCTaGATCCACTCTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTSSTPL*IHSLLF
Trigger: AAAGAGAAGAGAGTGGATCCAGAGGGGAGTGGAGGA...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
3UTR CAA 72 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTaGGTGGTGCACATGAGACAGAGGGGTCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: VDVQTFKPSKRS*VVHMRQRGQDE
Trigger: CTCATCCTGACCCCTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
3UTR CAA 72 bp CTCAGTCTGGGCTCCTGGATTGCTCGAGTCCACCTCTaGCTTAATACTGTTCACGTTGGGGACTGTAGAAAC +
Preference number: 4 (lower is better)
Translates to: LSLGSWIARVHL*LNTVHVGDCRN
Trigger: GTTTCTACAGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp AGTCCTCTCCTGAAACACAGGCTGGAAAGTACTTATTaGCTCAGTCTGGGCTCCTGGATTGCTCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SPLLKHRLESTY*LSLGSWIARVH
Trigger: GTGGACTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAGTACTTTCCAGCCTGTGTTTCAGGAGAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp CCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAATCTGCAGGAAGTAGGTaGCACTCCCTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PGACWWVGKYSVASVNIESAGSR*HSLQSL
Trigger: CAGGCTCTGGAGGGAGTGTCACCTACTTCCTGCAGA...TTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACGGGCCGGGCTCTGAGTaGTGGAGATGGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNGPGSE*WRWLQM
Trigger: CATCTGGAGCCATCTCCATCACTCAGAGCCCGGCCC...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp TGTGGAACCACTCGGAAGATGCCCCTGGGTCCCACCAGCTGCAAGTTGAATTTGAAAGTCAATGGCAGCTaGGTTCTCCACAATGATTGT +
Preference number: 4 (lower is better)
Translates to: CGTTRKMPLGPTSCKLNLKVNGS*VLHNDC
Trigger: ACAATCATTGTGGAGAACTCAGCTGCCATTGACTTT...CAAATTCAACTTGCAGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR TCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACGTAAGGCTGTGGTGCTaGAGGATGGGGAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNVRLWC*RMGSPG
Trigger: ACCGGGGCTCCCCATCCTTCAGCACCACAGCCTTAC...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCACGGCAAGTGTCTACTaGGCTTGTGTAAGTAGATAC +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAATASVY*ACVSRY
Trigger: GTATCTACTTACACAAGCTCAGTAGACACTTGCCGT...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAATGGTGGCCAAGGCCTTaGAGACTGTCAGGATGTGCC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQWWPRP*RLSGCA
Trigger: GGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCA...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTGCATTCATGCCGCTTTaGACTTGGTTAAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTAFMPL*TWLKPS
Trigger: TGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGC...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGCCCACAGAACTGGGCTaGAGAAAAATACTTTGCATT +
Preference number: 4 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQPTELG*RKILCI
Trigger: AATGCAAAGTATTTTTCTGCAGCCCAGTTCTGTGGG...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGTAAGTAGAGCCAAATaGAAAGAACTGTTCTACTTT +
Preference number: 4 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQVSRAK*KELFYF
Trigger: AAAGTAGAACAGTTCTTTGCATTTGGCTCTACTTAC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCGGCCTGCAAATGTCCTaGTGTTCAAGATATCTGCAT +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTGLQMS*CSRYLH
Trigger: ATGCAGATATCTTGAACAGCAGGACATTTGCAGGCC...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACTCTCCATGCAGCCCTaGCTGGGCTTGTCCTGTTTG +
Preference number: 4 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKLSMQP*LGLSCL
Trigger: CAAACAGGACAAGCCCAGGCAGGGCTGCATGGAGAG...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAGATGCTGTGGCATCTaGCCTGTCCTCCACTCCCCT +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQRCCGI*PVLHSP
Trigger: AGGGGAGTGGAGGACAGGGCAGATGCCACAGCATCT...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AAATTTAGGGAGAGGGAAAATGGTCTAGGGAGGATTTCTGAGAATCTGATACTTCGCAGCACACCGCTGTaGCGGTCCACGGCAAATGGG +
Preference number: 4 (lower is better)
Translates to: KFRERENGLGRISENLILRSTPL*RSTANG
Trigger: CCCATTTGCCGTGGACCGCCACAGCGGTGTGCTGCG...AAGTATCAGATTCTCAGAAATCCTCCCTAGACCATTTTCCCTCTCCCTAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCATTCAGGACTGTCTGTaGAACCACTCGGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITIQDCL*NHSEDA
Trigger: GGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAAT...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCCCCAGTCCCATAGGTaGAATATTTCACTTCGCCCC +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVPQSHR*NISLRP
Trigger: GGGGCGAAGTGAAATATTCCACCTATGGGACTGGGG...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGCATAGAAGTTGTACCTaGCAGTGGCCTCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: DVQTFKPSKRSLVVHMRQHRSCT*QWPQRP
Trigger: TGGACGCTGAGGCCACTGCCAGGTACAACTTCTATG...CTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATAGTCCACCAGGTTGTTaGGTTCCTCTGCATCCTCGT +
Preference number: 4 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHSPPGC*VPLHPR
Trigger: ACGAGGATGCAGAGGAACCCAACAACCTGGTGGACT...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGCAGATCTCCCCCGTGTaGGAATTGATGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: CSDLQAKQKKLGGAHETEQISPV*ELMSNT
Trigger: CGTGTTCGACATCAATTCCCACACGGGGGAGATCTG...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCGAGATCAGAGTTGACTaGACGGGGCTTCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPEIRVD*TGLPIV
Trigger: AACTATGGGAAGCCCCGTCCAGTCAACTCTGATCTC...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAGGGGCGGAGGAAAGATaGGGGGTCATAGGGCATACA +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQGAEER*GVIGHT
Trigger: TGTATGCCCTATGACCCCCCATCTTTCCTCCGCCCC...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAATTCAAGGATGGCTGGTaGGGCAGCTCCTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQFKDGW*GSSSES
Trigger: GCTCTCTGAGGAGCTGCCCCACCAGCCATCCTTGAA...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAATTCAAGGATGGCTGGTaGGGCAGCTCCTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKFKDGW*GSSSES
Trigger: GCTCTCTGAGGAGCTGCCCCACCAGCCATCCTTGAA...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTCTCTTCAAGGATGGCTaGTGGGGCAGCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPLFKDG*WGSSSE
Trigger: CTCTGAGGAGCTGCCCCACCAGCCATCCTTGAAGAG...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCTTGTCTCTTCAAGGATaGCTGGTGGGGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVLSLQG*LVGQLL
Trigger: GAGGAGCTGCCCCACCAGCCATCCTTGAAGAGACAA...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAACTCAGTCTGGGCTCCTaGATTGCTCGAGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQLSLGS*IARVHL
Trigger: GAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAG...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp GCAGGGCACAACCTATTTGTATTAACCCCAGAGGCCTaGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAG +
Preference number: 4 (lower is better)
Translates to: AGHNLFVLTPEA*YDFCPGEGCHK
Trigger: CTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGCCTCTGGGGTTAATACAAATAGGTTGTGCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp TTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTaGGGGACTGTAGAAACCCCAGCAAGGATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLESTSCLILFT*GTVETPARILH
Trigger: GTGCAGAATCCTTGCTGGGGTTTCTACAGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCAAAGTCAATGGCAGCTaGGTTCTCCACAATGATTGT +
Preference number: 4 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAAKVNGS*VLHNDC
Trigger: ACAATCATTGTGGAGAACTCAGCTGCCATTGACTTT...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAAAAGTCAATGGCAGCTaGGTTCTCCACAATGATTGT +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGKVNGS*VLHNDC
Trigger: ACAATCATTGTGGAGAACTCAGCTGCCATTGACTTT...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp AAATTTAGGGAGAGGGAAAATGGTCTAGGGAGGATTTCTGAGAATCTGATACTTCTGGATCCACAGCTGTaGCAGCCACCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KFRERENGLGRISENLILLDPQL*QPPRWS
Trigger: GCTCCAGCGTGGTGGCTGTCACAGCTGTGGATCCAG...AAGTATCAGATTCTCAGAAATCCTCCCTAGACCATTTTCCCTCTCCCTAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCCCCCGTGTGGGAATTaGTGTCGAACACGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFPPCGN*CRTRWR
Trigger: CCGCCAACGTGTTCGACATCAATTCCCACACGGGGG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGCCCCCGTGTGGGAATTaGTGTCGAACACGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTPPCGN*CRTRWR
Trigger: CCGCCAACGTGTTCGACATCAATTCCCACACGGGGG...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTAGTCCCTTCCAGGTGTaGTGTTGTGCAGGGCATCCA +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPSPFQV*CCAGHP
Trigger: TGGATGCCCTGCACAACATCACACCTGGAAGGGACT...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGCTTGGGCTGCCCCTTaGAAAACTCTAGAGTACAGA +
Preference number: 4 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHAWAAP*KTLEYR
Trigger: TCTGTACTCTAGAGTTTTTCAAGGGGCAGCCCAAGC...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp GATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGGGTGTCACCATCATaGAATAGCCTGGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: DVQTFKPSKRSLVVHMRQRVSPS*NSLGYH
Trigger: ATGGTAGCCCAGGCTATTTCATGATGGTGACACCCT...CTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGGTGGTCTACGGATCTTaGGGGTGTCACCATCATGAA +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVVVYGS*GCHHHE
Trigger: TTCATGATGGTGACACCCTCAAGATCCGTAGACCAC...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCGTAGTGCCAAGGATTTaGGTAACGGGGACGTATTTG +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPVVPRI*VTGTYL
Trigger: CAAATACGTCCCCGTTACTCAAATCCTTGGCACTAC...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGGGTCTCCTCCAGTGCTaGCAACACTTGCCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTGLLQC*QHLPVP
Trigger: AGGCACCGGCAAGTGTTGTCAGCACTGGAGGAGACC...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTCGTGATTGGAAGATCTaGGCTCAGCCGCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPRDWKI*AQPQEE
Trigger: TTCCTCCTGCGGCTGAGCTCAGATCTTCCAATCACG...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGCTGGGTCCCACCAGCTaGAAGTTGAATTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHELGPTS*KLNLAL
Trigger: CAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAG...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAGATCAGGAAGAGGTCTaGCCCAGTCCCATAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQDQEEV*PSPIGG
Trigger: TCCACCTATGGGACTGGGGCAGACCTCTTCCTGATC...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGTTCTTCTCAAACTTTTaGTTGAGCTCAGAGATCAGA +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEFFSNF*LSSEIR
Trigger: TCTGATCTCTGAGCTCAAGCAAAAGTTTGAGAAGAA...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCTGGCCAGGGCCCTGCTaGTTGACTAAGGATGATGAT +
Preference number: 4 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVWPGPC*LTKDDD
Trigger: ATCATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCA...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACGTGGCCAGGGCCCTaGTGCTTGACTAAGGATGAT +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQTWPGP*CLTKDD
Trigger: ATCATCCTTAGTCAAGCAGCAGGGCCCTGGCCACGT...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGTCTGCCCAGACAGAATaGTCTATCTTTCCAAATGCA +
Preference number: 4 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVSAQTE*SIFPNA
Trigger: TGCATTTGGAAAGATAGAGCATTCTGTCTGGGCAGA...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACCAGCTTTGACATTTTaGGGCTCAGGGCAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKPALTF*GSGQSW
Trigger: CCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGG...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTCTCGAGTCCACCTCTTaGTTAATACTGTTCACGTTG +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTLESTS*LILFTL
Trigger: CAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAG...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTGCCCTTGCCGGGCTaGACTGGTAGGGTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSLPLPG*TGRVGE
Trigger: CTCTCCCACCCTACCAGTGCAGCCCGGCAAGGGCAG...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCCGCTCTCTCCATAGAATGTTGGCGGGTGGTTGTTGAGGTCCACAATCCTGATAGGATCGTCCTGCATTaGCTAGGGAAGTCATTTACA +
Preference number: 4 (lower is better)
Translates to: SALSIECWRVVVEVHNPDRIVLH*LGKSFT
Trigger: TGTAAATGACTTCCCTAGGCAATGCAGGACGATCCT...ATCAGGATTGTGGACCTCAACAACCACCCGCCAACATTCTATGGAGAGAGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCTGTAGAGAATTCGATTaGGTTTGCCCCGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITCREFD*VCPGLH
Trigger: ATGGAGACCGGGGCAAACCCAATCGAATTCTCTACA...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATCTCTCCATAGAATGTTaGCGGGTGGTTGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHLSIEC*RVVVEV
Trigger: GACCTCAACAACCACCCGCCAACATTCTATGGAGAG...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TGTCACCATCATGAAATAGCCTGGGCTACCATGAAGGTGAGAGTGGATGTTCAGATTCAGGACTGTCTGTaGAACCACTCGGAAGATGCC +
Preference number: 4 (lower is better)
Translates to: CHHHEIAWATMKVRVDVQIQDCL*NHSEDA
Trigger: GGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAAT...CTGAACATCCACTCTCACCTTCATGGTAGCCCAGGCTATTTCATGATGGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAACAATGATTGTGACTTaGGCTTCATTCAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGTMIVT*ASFRTV
Trigger: GACAGTCCTGAATGAAGCCCAAGTCACAATCATTGT...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGCGTTCTCAGGAATCCTaGCAACGTAGTAGAGGGAGT +
Preference number: 4 (lower is better)
Translates to: CSDLQAKQKKLGGAHETERSQES*QRSRGS
Trigger: ACTCCCTCTACTACGTTGCCAGGATTCCTGAGAACG...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAACCAGGGTCCTGTATCTaGATCCACAGCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQPGSCI*IHSCDS
Trigger: GCTGTCACAGCTGTGGATCCAGATACAGGACCCTGG...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AAATTTAGGGAGAGGGAAAATGGTCTAGGGAGGATTTCTGAGAATCTGATACTTTGTGGTGCTGAAGGATaGGGAGCCCCGGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: KFRERENGLGRISENLILCGAEG*GAPVLG
Trigger: GCCAAGGACCGGGGCTCCCCATCCTTCAGCACCACA...AAGTATCAGATTCTCAGAAATCCTCCCTAGACCATTTTCCCTCTCCCTAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGAAGGCAATTTCGCAGTaGGGATGCAAGAACAGACCC +
Preference number: 4 (lower is better)
Translates to: CSDLQAKQKKLGGAHETEKAISQ*GCKNRP
Trigger: GGGTCTGTTCTTGCATCCCCACTGCGAAATTGCCTT...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGGAGCCAGGAGCATGTTaGTGGGTAGGGAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHEEPGAC*WVGKYS
Trigger: TGAATACTTCCCTACCCACCAACATGCTCCTGGCTC...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CCA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGGAGCCAGGAGCATGTTaGTGGGTAGGGAAGTATTCA +
Preference number: 4 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVEPGAC*WVGKYS
Trigger: TGAATACTTCCCTACCCACCAACATGCTCCTGGCTC...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACACCCACGGCCTTCATaGGGTTGTCCTTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKHPRPS*GCPWSV
Trigger: TACAGACCAAGGACAACCCCATGAAGGCCGTGGGTG...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTGAGCAGAGAGCTTTCTaGGCTGTTGTTGTTACAGTT +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTEQRAF*AVVVTV
Trigger: AACTGTAACAACAACAGCCCAGAAAGCTCTCTGCTC...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAATCTGCCCTCACTCTTaGCAAGATCAATCTTCCACC +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPICPHS*QDQSST
Trigger: GGTGGAAGATTGATCTTGCCAAGAGTGAGGGCAGAT...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGACTGGCCTCACCCCACTaGCGGGGTCTCCTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRLASPH*RGLLQC
Trigger: GCACTGGAGGAGACCCCGCCAGTGGGGTGAGGCCAG...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGTCTCAGGGCCAGGAATaGGCAAGCCTGCCCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTSQGQE*ASLPSV
Trigger: CACACTGGGCAGGCTTGCCCATTCCTGGCCCTGAGA...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGACTCTGCAGAGTATTTaGTGTCACATCCATTTATTG +
Preference number: 4 (lower is better)
Translates to: SGGRRMDPPAEAARRQVETLQSI*CHIHLL
Trigger: CAATAAATGGATGTGACACCAAATACTCTGCAGAGT...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCCCTGGCAGGTGGACTaGCCTTGGATTCCCTCAACG +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFPWQVD*PWIPST
Trigger: CGTTGAGGGAATCCAAGGCCAGTCCACCTGCCAGGG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCAGATGCCAACACCCCTaGCAGGTGGACTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFRCQHP*QVDWPW
Trigger: CCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCT...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTAACCACATCAGCCCCATaGAGCCTCCCACCGCCATCC +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLTTSAP*SLPPPS
Trigger: GGATGGCGGTGGGAGGCTTCATGGGGCTGATGTGGT...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTGGGCCGGGCTCTGAGTaGTGGAGATGGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSGPGSE*WRWLQM
Trigger: CATCTGGAGCCATCTCCATCACTCAGAGCCCGGCCC...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTCATCCGCTGTGGAACTaGACTTCTCTGGGGTGTTCA +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPHPLWN*TSLGCS
Trigger: TGAACACCCCAGAGAAGTTCAGTTCCACAGCGGATG...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAACTCAGAGAGCAGCCCTaGTGCTCTTCTAGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQLREQP*CSSSCL
Trigger: AAGGCAACTAGAAGAGCATCAGGGCTGCTCTCTGAG...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAAAAGCATTCCCTCCTTaGGAACTCATTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGKAFPP*ELIFFI
Trigger: GATGAAGAAAATGAGTTCTCAAGGAGGGAATGCTTT...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGTCAGTCACCTGTACATaGAGCTCATACACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DVQTFKPSKRSLVVHMRQSVTCT*SSYTSL
Trigger: GAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGA...CTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCTGCAGAAAAATACTTTaGATTCATGCCGCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATCRKIL*IHAALH
Trigger: GTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCA...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTGACAACACTTGCCGGTaGCTTAAGTTTGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPDNTCR*LKFGCT
Trigger: GGTGCAGCCAAACTTAAGGCACCGGCAAGTGTTGTC...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTCCAACATCAGCCTGTTaGTACTCTGCTTTATTGATC +
Preference number: 4 (lower is better)
Translates to: DVFANCILEPNVLPKALTPTSAC*YSALLI
Trigger: GATCAATAAAGCAGAGTAGCAACAGGCTGATGTTGG...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGTGTAGAGAATTCGATTaGGTTTGCCCCGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: CSDLQAKQKKLGGAHETECREFD*VCPGLH
Trigger: ATGGAGACCGGGGCAAACCCAATCGAATTCTCTACA...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TTTTCAAAGTCAATGGCAGCTGAGTTCTCCACAATGATTGTGACTTGGGCTTCAGATCTCTCCCTGGGGTaGGTGCTCATTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: FSKSMAAEFSTMIVTWASDLSLG*VLIHGQ
Trigger: CTGTCCATGAATGAGCACCCACCCCAGGGAGAGATC...TGAAGCCCAAGTCACAATCATTGTGGAGAACTCAGCTGCCATTGACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTACACGCTGGAGCCCCCTaGGGCGTTCTCAGGAATCCT +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLHAGAP*GVLRNP
Trigger: AGGATTCCTGAGAACGCCCCAGGGGGCTCCAGCGTG...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAACCCCAGTCCCATAGGTaGAATATTTCACTTCGCCCC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQPQSHR*NISLRP
Trigger: GGGGCGAAGTGAAATATTCCACCTATGGGACTGGGG...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAACATAGAAGTTGTACCTaGCAGTGGCCTCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKHRSCT*QWPQRP
Trigger: TGGACGCTGAGGCCACTGCCAGGTACAACTTCTATG...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGCCAGGAGCATGTTGGTaGGTAGGGAAGTATTCAGTT +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMPGACW*VGKYSV
Trigger: AACTGAATACTTCCCTACCCACCAACATGCTCCTGG...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTCCAGGGTCCTGTATCTaGATCCACAGCCTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPPGSCI*IHSLEG
Trigger: ACCTTCAAGGCTGTGGATCCAGATACAGGACCCTGG...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372117.6
CDS-3UTR CCA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCTGTGAGCAAAAGAGCTaGATAAAAACGGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATCEQKS*IKTEVS
Trigger: TGAGACTTCCGTTTTTATCCAGCTCTTTTGCTCACA...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTGCACTTCCCCATCCATaGCCAGTTTGCAAGATTGGC +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPALPHP*PVCKIG
Trigger: GCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGC...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGAACCACATCAGCCCCATaGAGCCTCCCACCGCCATCC +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRTTSAP*SLPPPS
Trigger: GGATGGCGGTGGGAGGCTTCATGGGGCTGATGTGGT...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTACAGGGGCCATGTCCTaGACATCCTCCACATTGACC +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEITGAMS*TSSTLT
Trigger: GGTCAATGTGGAGGATGTTCAGGACATGGCCCCTGT...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTACCCCCGTGTGGGAATTaGTGTCGAACACGTTGGCGG +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLPPCGN*CRTRWR
Trigger: CCGCCAACGTGTTCGACATCAATTCCCACACGGGGG...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGTGTGTCCCTGTCCACTaGATGGACCTTAAAGATGAT +
Preference number: 4 (lower is better)
Translates to: CSDLQAKQKKLGGAHETECVPVH*MDLKDD
Trigger: ATCATCTTTAAGGTCCATGCAGTGGACAGGGACACA...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAACTGGGTCCCACCAGCTaGAAGTTGAATTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQLGPTS*KLNLAL
Trigger: CAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAG...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTAGAACCACTCGGAAGATaGCCCTGGGTCCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLEPLGR*PWVPPA
Trigger: AGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTC...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGACCCCGGTCCTTGGCCTaGACCTCTAGGGACCATAGG +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRPRSLA*TSRDHR
Trigger: CCTATGGTCCCTAGAGGTGCAGGCCAAGGACCGGGG...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTCCTTTTCCTGCTCCTaGTCTCAGCTGCAGGCGTCA +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFSFSCS*SQLQAS
Trigger: TGACGCCTGCAGCTGAGAGCAGGAGCAGGAAAAGGA...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCCCCACAGAACTGGGCTaGAGAAAAATACTTTGCATT +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPPTELG*RKILCI
Trigger: AATGCAAAGTATTTTTCTGCAGCCCAGTTCTGTGGG...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCGCTGTTCAAGATATCTaGATGGCAATTTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTAVQDI*MAIWTK
Trigger: TTTTGTCCAAATTGCCATGCAGATATCTTGAACAGC...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGACGCCCAAATGCAGGCTaGCGGCTACACAGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRRPNAG*RLHRPQ
Trigger: CTGTGGCCTGTGTAGCCGGCAGCCTGCATTTGGGCG...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AAATTTAGGGAGAGGGAAAATGGTCTAGGGAGGATTTCTGAGAATCTGATACTTCCCGGTCTCCATCCATaGCGACCACCTTCAGTACCT +
Preference number: 4 (lower is better)
Translates to: KFRERENGLGRISENLILPGLHP*RPPSVP
Trigger: AGGTACTGAAGGTGGTCGCCATGGATGGAGACCGGG...AAGTATCAGATTCTCAGAAATCCTCCCTAGACCATTTTCCCTCTCCCTAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTCTCTCCATAGAATGTTaGCGGGTGGTTGTTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPLSIEC*RVVVEV
Trigger: GACCTCAACAACCACCCGCCAACATTCTATGGAGAG...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACTTGGCATTGGCTCCCTaGTCGGAGTCATTGACGGTG +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNLALAP*SESLTV
Trigger: CACCGTCAATGACTCCGACCAGGGAGCCAATGCCAA...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTACTTTTCAAAGTCAATaGCAGCTGAGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: APGLLESTSCLILFTLGTTFQSQ*QLSSPQ
Trigger: TTGTGGAGAACTCAGCTGCCATTGACTTTGAAAAGT...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAGAGGGAGTCGAACTTaGGGACATTGTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: ARSMLVGREVFSCFCKHRRGSRT*GHCHWC
Trigger: ACACCAATGACAATGTCCCCAAGTTCGACTCCCTCT...TCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCAGAGGGAGTCGAACTTaGGGACATTGTCATTGGTGT +
Preference number: 4 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVRGSRT*GHCHWC
Trigger: ACACCAATGACAATGTCCCCAAGTTCGACTCCCTCT...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTCCAGGGTCCTGTATCTaGATCCACAGCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEIPGSCI*IHSCDS
Trigger: GCTGTCACAGCTGTGGATCCAGATACAGGACCCTGG...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCGAGCACCCGCCGCATTaGCAGGACCTTGTTAGACTT +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFEHPPH*QDLVRL
Trigger: AAGTCTAACAAGGTCCTGCCAATGCGGCGGGTGCTC...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAGCAGGGGATCAGCATaGCCTTTGGGTAACAGACTT +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQSRGSA*PLGNRL
Trigger: AAGTCTGTTACCCAAAGGCCATGCTGATCCCCTGCT...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp TGGAAAGTACTTATTTGCTCAGTCTGGGCTCCTGGATaGCTCGAGTCCACCTCTTGCTTAATACTGTTCACG +
Preference number: 4 (lower is better)
Translates to: WKVLICSVWAPG*LESTSCLILFT
Trigger: CGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAGTACTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp GCTCAGCCGCAGGAGGAAAATGACTCTGCAGAGTATTaGGTGTCACATCCATTTATTGTCCATGAGGCTACA +
Preference number: 4 (lower is better)
Translates to: AQPQEENDSAEY*VSHPFIVHEAT
Trigger: TGTAGCCTCATGGACAATAAATGGATGTGACACCAAATACTCTGCAGAGTCATTTTCCTCCTGCGGCTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTTCTGCAGGAAGTAGGTaGCACTCCCTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSSAGSR*HSLQSL
Trigger: CAGGCTCTGGAGGGAGTGTCACCTACTTCCTGCAGA...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACCCACCAGCTGCAAGTTaGATTTGGCATTGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNPPAAS*IWHWLP
Trigger: AGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGG...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAAAAGTCAATGGCAGCTaGGTTCTCCACAATGATTGT +
Preference number: 4 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRKVNGS*VLHNDC
Trigger: ACAATCATTGTGGAGAACTCAGCTGCCATTGACTTT...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTGTCAATTCTCAGCCCTaGAGAATGGAGGGCATTGTA +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPVNSQP*RMEGIV
Trigger: TACAATGCCCTCCATTCTTCAGGGCTGAGAATTGAC...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGAGCCAGGAGGCAAGTTaGGCTTCACTGTGTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTSQEAS*ASLCVR
Trigger: TCTGACACACAGTGAAGCTCAACTTGCCTCCTGGCT...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGTGGTCGCTTAAGCCATaGCCGCCTCATTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTWSLKP*PPHSGN
Trigger: GTTTCCAGAATGAGGCGGTCATGGCTTAAGCGACCA...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTGAATTCGATTGGGTTTaGCCCGGTCTCCATCCATGG +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEIEFDWV*PGLHPW
Trigger: CCATGGATGGAGACCGGGGCAAACCCAATCGAATTC...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATTTAAGATGCTTGGGCTaGCCCTTGAAAAACTCTAGA +
Preference number: 4 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHLRCLG*PLKNSR
Trigger: TCTAGAGTTTTTCAAGGGGCAGCCCAAGCATCTTAA...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCGGGATTATACCATTGTaGAAAACAGGGGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVGIIPL*KTGVSD
Trigger: GTCACTGACCCCTGTTTTGCACAATGGTATAATCCC...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCTGGCTGGAGACATCTaGCCTCACTCTTGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFLAGDI*PHSWQD
Trigger: ATCTTGCCAAGAGTGAGGGCAGATGTCTCCAGCCAG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGCTGGCTGGAGACATCTaGCCTCACTCTTGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTLAGDI*PHSWQD
Trigger: ATCTTGCCAAGAGTGAGGGCAGATGTCTCCAGCCAG...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTTCCCTGTCCACTGCATaGACCTTAAAGATGATGCTC +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPSLSTA*TLKMML
Trigger: GAGCATCATCTTTAAGGTCCATGCAGTGGACAGGGA...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTGGTGTCCAGGAGCTaGATCACAACATCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFLVSRS*ITTSAV
Trigger: CACAGCGGATGTTGTGATCCAGCTCCTGGACACCAA...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTGATAAGCCCAGTGGATaGGTGGATCAGGAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEIDKPSG*VDQEEV
Trigger: GACCTCTTCCTGATCCACCCATCCACTGGGCTTATC...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCATAGAAGTTGTACCTaGCAGTGGCCTCAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFHRSCT*QWPQRP
Trigger: TGGACGCTGAGGCCACTGCCAGGTACAACTTCTATG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAAACGAACTAATACAGTaGTCTACGGATCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRNELIQ*STDLEG
Trigger: ACCCTCAAGATCCGTAGACCACTGTATTAGTTCGTT...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGCTGGGATGGGTGAGCTaGCTTCTCGTCAATTCTCAG +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTLGWVS*LLVNSQ
Trigger: CTGAGAATTGACGAGAAGCCAGCTCACCCATCCCAG...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTTTTCCAAATGCATCCTaGCACAGTCCCACAGTCAGT +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPFPNAS*HSPTVS
Trigger: ACTGACTGTGGGACTGTGCCAGGATGCATTTGGAAA...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAGATCAGCATGGCCTTTaGGTAACAGACTTTATTTTC +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPDQHGL*VTDFIF
Trigger: GAAAATAAAGTCTGTTACCCAAAGGCCATGCTGATC...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAGTGTGTCAGAAAGACTaGTCTCCACAGGTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQVCQKD*SPQVSK
Trigger: TTTGCTGACCTGTGGAGACCAGTCTTTCTGACACAC...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTTGGGCTTGTCCTGTTTaGGAGAAAAGTCCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: HLVKALITTIFFNPHPRPWACPV*EKSPVD
Trigger: GTCTACTGGACTTTTCTCCCAAACAGGACAAGCCCA...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp CTGAAGAATGGAGGGCATTGTAGTAGTGCCAAGGATTaGAGTAACGGGGACGTATTTGCCAATTGCATCCTA +
Preference number: 4 (lower is better)
Translates to: LKNGGHCSSAKD*SNGDVFANCIL
Trigger: TAGGATGCAATTGGCAAATACGTCCCCGTTACTCAAATCCTTGGCACTACTACAATGCCCTCCATTCTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTATTCAGGGTGTATACGTaGGAGCCTACAGGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLFRVYT*EPTGVS
Trigger: GGACACCCCTGTAGGCTCTCACGTATACACCCTGAA...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTACATAAGGCTCCTGGATaGACCTGGGCGCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLHKAPG*TWAPHH
Trigger: ATGATGAGGCGCCCAGGTTCATCCAGGAGCCTTATG...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGACGGGCTCTGCATGGGTaGTGGAATAGTCCACCAGGT +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRRALHG*WNSPPG
Trigger: ACCTGGTGGACTATTCCATCACCCATGCAGAGCCCG...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTAGGGTGTCACCATCATaGAATAGCCTGGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEIRVSPS*NSLGYH
Trigger: ATGGTAGCCCAGGCTATTTCATGATGGTGACACCCT...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTGTGGTCTACGGATCTTaGGGGTGTCACCATCATGAA +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEIVVYGS*GCHHHE
Trigger: TTCATGATGGTGACACCCTCAAGATCCGTAGACCAC...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp AAATTTAGGGAGAGGGAAAATGGTCTAGGGAGGATTTCTGAGAATCTGATACTTGTTGTTGGGTTCCTCTaGATCCTCGTCTATGGCCTC +
Preference number: 4 (lower is better)
Translates to: KFRERENGLGRISENLILVVGFL*ILVYGL
Trigger: GAGGCCATAGACGAGGATGCAGAGGAACCCAACAAC...AAGTATCAGATTCTCAGAAATCCTCCCTAGACCATTTTCCCTCTCCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR GCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCATTCTTCTCAAACTTTTaGTTGAGCTCAGAGATCAGA +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPFFSNF*LSSEIR
Trigger: TCTGATCTCTGAGCTCAAGCAAAAGTTTGAGAAGAA...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAGCTGTTCAAGATATCTaGATGGCAATTTGGACAAAA +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPAVQDI*MAIWTK
Trigger: TTTTGTCCAAATTGCCATGCAGATATCTTGAACAGC...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCAGTGCTGACAACACTTaGCGGTGCCTTAAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFSADNT*RCLKFG
Trigger: GCCAAACTTAAGGCACCGGCAAGTGTTGTCAGCACT...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TGTCACCATCATGAAATAGCCTGGGCTACCATGAAGGTGAGAGTGGATGTTCAGAGGGAAGTATTCAGTTaGTTCTTAGTCTTCTCACCT +
Preference number: 4 (lower is better)
Translates to: CHHHEIAWATMKVRVDVQREVFS*FLVFSP
Trigger: AGGTGAGAAGACTAAGAAGCAACTGAATACTTCCCT...CTGAACATCCACTCTCACCTTCATGGTAGCCCAGGCTATTTCATGATGGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623399.1
CDS-3UTR GCA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAAGCCTGTTGCTACTCTaGTTTATTGATCAAATGATG +
Preference number: 4 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPSLLLL*FIDQMM
Trigger: CATCATTTGATCAATAAAGCAGAGTAGCAACAGGCT...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAGTGGGTGCTCATTCATaGACAGCTCAAACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQVGAHS*TAQTCF
Trigger: AAAACAGGTTTGAGCTGTCCATGAATGAGCACCCAC...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTAGATCTCTCCCTGGGGTaGGTGCTCATTCATGGACAG +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLDLSLG*VLIHGQ
Trigger: CTGTCCATGAATGAGCACCCACCCCAGGGAGAGATC...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACTTTTCAAAGTCAATaGCAGCTGAGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHETFQSQ*QLSSPQ
Trigger: TTGTGGAGAACTCAGCTGCCATTGACTTTGAAAAGT...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp AAATTTAGGGAGAGGGAAAATGGTCTAGGGAGGATTTCTGAGAATCTGATACTTCAGATCTCCCCCGTGTaGGAATTGATGTCGAACACG +
Preference number: 4 (lower is better)
Translates to: KFRERENGLGRISENLILQISPV*ELMSNT
Trigger: CGTGTTCGACATCAATTCCCACACGGGGGAGATCTG...AAGTATCAGATTCTCAGAAATCCTCCCTAGACCATTTTCCCTCTCCCTAAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACAGAACAGACCCTGGCTaGAATGTGGTTTCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNRTDPG*NVVSWA
Trigger: AGCCCAAGAAACCACATTCCAGCCAGGGTCTGTTCT...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAGAGCAGAGAGCTTTCTaGGCTGTTGTTGTTACAGTT +
Preference number: 4 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKEQRAF*AVVVTV
Trigger: AACTGTAACAACAACAGCCCAGAAAGCTCTCTGCTC...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAACTGCACCCACAGAACTaGGCTGCAGAAAAATACTTT +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQLHPQN*AAEKYF
Trigger: AAAGTATTTTTCTGCAGCCCAGTTCTGTGGGTGCAG...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGATGACCGCCTCATTCTaGAAACTAGGCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTMTASF*KLGPSE
Trigger: CTCTGAAGGGCCTAGTTTCCAGAATGAGGCGGTCAT...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR TCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGTTTTGGTTTTCTTACTaGCTTTGTTGTACCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMFWFSY*LCCTRE
Trigger: TTCCCTGGTACAACAAAGTCAGTAAGAAAACCAAAA...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGTCTTTATTAGCAGCATaGGAACGAACTAATACAGTG +
Preference number: 4 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMSLLAA*ERTNTV
Trigger: CACTGTATTAGTTCGTTCTCATGCTGCTAATAAAGA...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR TCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCGTAGTGCCAAGGATTTaGGTAACGGGGACGTATTTG +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFVVPRI*VTGTYL
Trigger: CAAATACGTCCCCGTTACTCAAATCCTTGGCACTAC...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTGAATTCGATTGGGTTTaGCCCGGTCTCCATCCATGG +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSEFDWV*PGLHPW
Trigger: CCATGGATGGAGACCGGGGCAAACCCAATCGAATTC...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGACACGTTGGCGGGCTCTaGATGGGTGATGGAATAGTC +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRHVGGL*MGDGIV
Trigger: GACTATTCCATCACCCATGCAGAGCCCGCCAACGTG...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCGCATTCATGCCGCTTTaGACTTGGTTAAAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFAFMPL*TWLKPS
Trigger: TGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGC...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCGTAAGTAGAGCCAAATaGAAAGAACTGTTCTACTTT +
Preference number: 4 (lower is better)
Translates to: LSNGDVFANCILEPNVLPVSRAK*KELFYF
Trigger: AAAGTAGAACAGTTCTTTGCATTTGGCTCTACTTAC...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCACATGCCAGTCTCCTaGCTCATTCCTCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSHMPVS*LIPHVA
Trigger: TGCCACATGAGGAATGAGGCAGGAGACTGGCATGTG...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTATTGGTGTCCAGGAGCTaGATCACAACATCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLLVSRS*ITTSAV
Trigger: CACAGCGGATGTTGTGATCCAGCTCCTGGACACCAA...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTCCAGGAGCATGTTGGTaGGTAGGGAAGTATTCAGTT +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEIPGACW*VGKYSV
Trigger: AACTGAATACTTCCCTACCCACCAACATGCTCCTGG...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAAGCATTCCCTCCTTaGGAACTCATTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQKAFPP*ELIFFI
Trigger: GATGAAGAAAATGAGTTCTCAAGGAGGGAATGCTTT...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTTTGCAAGATTGGCTCTaGCTTGGTCCAAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSLQDWL*LGPSSW
Trigger: CCAGGAACTTGGACCAAGGCAGAGCCAATCTTGCAA...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTGTGGGTGCTCATTCATaGACAGCTCAAACCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEIVGAHS*TAQTCF
Trigger: AAAACAGGTTTGAGCTGTCCATGAATGAGCACCCAC...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACCATCATGAAATAGCCTaGGCTACCATGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNHHEIA*ATMKVR
Trigger: TCTCACCTTCATGGTAGCCCAGGCTATTTCATGATG...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CCA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAGATCAGCATGGCCTTTaGGTAACAGACTTTATTTTC +
Preference number: 4 (lower is better)
Translates to: TRPANVLLFKISAWQFGQDQHGL*VTDFIF
Trigger: GAAAATAAAGTCTGTTACCCAAAGGCCATGCTGATC...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGTCTCAAACTTTTGCTTaGGCTCAGAGATCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTSQTFA*AQRSEL
Trigger: CAACTCTGATCTCTGAGCTCAAGCAAAAGTTTGAGA...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTATCCCTGTCCACTGCATaGACCTTAAAGATGATGCTC +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLSLSTA*TLKMML
Trigger: GAGCATCATCTTTAAGGTCCATGCAGTGGACAGGGA...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp AAATTTAGGGAGAGGGAAAATGGTCTAGGGAGGATTTCTGAGAATCTGATACTTCATCATGAAATAGCCTaGGCTACCATGAAGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KFRERENGLGRISENLILHHEIA*ATMKVR
Trigger: TCTCACCTTCATGGTAGCCCAGGCTATTTCATGATG...AAGTATCAGATTCTCAGAAATCCTCCCTAGACCATTTTCCCTCTCCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp GGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTAACGAACTAATACAGTaGTCTACGGATCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GACWWVGKYSVASVNIEINELIQ*STDLEG
Trigger: ACCCTCAAGATCCGTAGACCACTGTATTAGTTCGTT...AATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGACTTATTTGCTCAGTCTaGGCTCCTGGATTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRLICSV*APGLLE
Trigger: CTCGAGCAATCCAGGAGCCCAGACTGAGCAAATAAG...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGCTTTGTTATTTCACGTaGTTGGAAGATCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTLCYFT*LEDLSS
Trigger: TGAGCTCAGATCTTCCAATCACGTGAAATAACAAAG...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTGACGTATTTGCCAATTaGATCCTAGAGCCCAATGTC +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSDVFAN*ILEPNV
Trigger: GACATTGGGCTCTAGGATGCAATTGGCAAATACGTC...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCACTTTTCTCTCTCTGTaGACACATGTAGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFTFLSL*THVDFL
Trigger: CAGGAAATCTACATGTGTGCACAGAGAGAGAAAAGT...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp TTGAGAACTCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCGAGTCCACCTCTTaGTTAATACTGTTCACGTTG +
Preference number: 4 (lower is better)
Translates to: LRTHFLHLGKLKTWSSGSLESTS*LILFTL
Trigger: CAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAG...AGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGAGTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTGTGAGCAAAAGAGCTaGATAAAAACGGAAGTCTCA +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFCEQKS*IKTEVS
Trigger: TGAGACTTCCGTTTTTATCCAGCTCTTTTGCTCACA...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR TCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACTCACATTACTCAGATTaGATAAGGCAATTTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNSHYSD*IRQFRS
Trigger: ACTGCGAAATTGCCTTATTCAATCTGAGTAATGTGA...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR TCA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACTCTTTATTAGCAGCATaGGAACGAACTAATACAGTG +
Preference number: 4 (lower is better)
Translates to: SSINYPVSGIFISSMRTNSLLAA*ERTNTV
Trigger: CACTGTATTAGTTCGTTCTCATGCTGCTAATAAAGA...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR GCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGAGGGATTATACCATTGTaGAAAACAGGGGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRGIIPL*KTGVSD
Trigger: GTCACTGACCCCTGTTTTGCACAATGGTATAATCCC...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR GCA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCTGATATTCATCAACTaGCCTGAATTGTCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFLIFIN*PELSLQ
Trigger: TTGAAGAGACAATTCAGGGCAGTTGATGAATATCAG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CCA 90 bp AGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAACATAGAAATTTAACAATGATTGTGACTTaGGCTTCATTCAGGACTGTC +
Preference number: 4 (lower is better)
Translates to: SMLVGREVFSCFCKHRNLTMIVT*ASFRTV
Trigger: GACAGTCCTGAATGAAGCCCAAGTCACAATCATTGT...TAAATTTCTATGTTTACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CCA 90 bp CTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTTTAGACTGCACCCACAGAACTaGGCTGCAGAAAAATACTTT +
Preference number: 4 (lower is better)
Translates to: LFKISAWQFGQKFSAFFRLHPQN*AAEKYF
Trigger: AAAGTATTTTTCTGCAGCCCAGTTCTGTGGGTGCAG...TCTAAAGAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
3UTR CAA 72 bp TGCAGAAAAATACTTTGCATTCATGCCGCTTTGCACTaGGTTAAAGCCCTCATCACCACTATTTTCTTCAAT +
Preference number: 4 (lower is better)
Translates to: CRKILCIHAALH*VKALITTIFFN
Trigger: ATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS GCA 90 bp GCCCACCGGCAGCGCCTCATGTCTCCGCCGGCGCGGAGTGTCGCCTaGCGCCGCCGAGACCGGGCGCAGGGGCACGGAGCATGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: AHRQRLMSPPARSVA*RRRDRAQGHGACPG
Trigger: CCCAGGGCATGCTCCGTGCCCCTGCGCCCGGTCTCGGCGGCGGCAGGCGACACTCCGCGCCGGCGGAGACATGAGGCGCTGCCGGTGGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623527.4
CDS GCA 90 bp CTGCGGAGTGAGAGAGCCAGAGACAGTAGGCACGGTCCACTGGGCTaGGCCAGTGCTGGGCGCCACGCTGGGTGGTGGAGGGAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LRSERARDSRHGPLG*ASAGRHAGWWRESR
Trigger: CCGGCTCTCCCTCCACCACCCAGCGTGGCGCCCAGCACTGGCGCAGCCCAGTGGACCGTGCCTACTGTCTCTGGCTCTCTCACTCCGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372117.6
ENST00000459673.1
ENST00000623527.4
CDS CCA 90 bp AGGCACGGTCCACTGGGCTGCGCCAGTGCTGGGCGCCACGCTGGGTaGTGGAGGGAGAGCCGGAGCTCTCGGGAGCAGAGAGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RHGPLGCASAGRHAG*WRESRSSREQRAFW
Trigger: CCAGAAAGCTCTCTGCTCCCGAGAGCTCCGGCTCTCCCTCCACCACCCAGCGTGGCGCCCAGCACTGGCGCAGCCCAGTGGACCGTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372117.6
ENST00000459673.1
ENST00000623527.4
CDS CCA 90 bp GTCGGCTGCGGAGTGAGAGAGCCAGAGACAGTAGGCACGGTCCACTaGGCTGCGCCAGTGCTGGGCGCCACGCTGGGTGGTGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: VGCGVREPETVGTVH*AAPVLGATLGGGGR
Trigger: TCTCCCTCCACCACCCAGCGTGGCGCCCAGCACTGGCGCAGCCCAGTGGACCGTGCCTACTGTCTCTGGCTCTCTCACTCCGCAGCCGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372117.6
ENST00000459673.1
ENST00000623527.4
CDS-3UTR CAA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCAGGGCTGGGCCGCTaGCGGAGCACCCGCCGCATT +
Preference number: 5 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQAGLGR*RSTRRI
Trigger: AATGCGGCGGGTGCTCCGCAAGCGGCCCAGCCCTGC...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS CCA 90 bp CCACGACGGTGGCCATGGTGCCGGCCAGCACACCCACGGCCTTCATaGGGTTGTCCTTGGTCTGTATCAGGAAGGCAGCCATGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: PRRWPWCRPAHPRPS*GCPWSVSGRQPWGS
Trigger: GGAGCCCCATGGCTGCCTTCCTGATACAGACCAAGGACAACCCCATGAAGGCCGTGGGTGTGCTGGCCGGCACCATGGCCACCGTCGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372117.6
ENST00000459673.1
ENST00000623527.4
CDS-3UTR CAA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACGGGGAGCCCCGGTCCTaGGCCTGCACCTCTAGGGAC +
Preference number: 5 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHGEPRS*ACTSRD
Trigger: GTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCC...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCAGGGCTGGGCCGCTaGCGGAGCACCCGCCGCATT +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPAGLGR*RSTRRI
Trigger: AATGCGGCGGGTGCTCCGCAAGCGGCCCAGCCCTGC...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTCCCAATTCCTGCCCTaGCCGGGCTGCACTGGTAGG +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWSQFLP*PGCTGR
Trigger: CCTACCAGTGCAGCCCGGCAAGGGCAGGAATTGGGA...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGGTGCTGCCGACCCCGTaGTCGAAGAAGTGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRVLPTP*SKKCGA
Trigger: CGCCCCGCACTTCTTCGACAACGGGGTCGGCAGCAC...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTTGATGTCGAACACGTaGGCGGGCTCTGCATGGGTG +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWLMSNT*AGSAWV
Trigger: CACCCATGCAGAGCCCGCCAACGTGTTCGACATCAA...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTGATGTTGTGCAGGGCATCCAGGGAGCGGATGGAATTCTTGAGCCAGATCTCCGGGGAGCCCCGGTCCTaGGCCTGCACCTCTAGGGAC +
Preference number: 5 (lower is better)
Translates to: VMLCRASRERMEFLSQISGEPRS*ACTSRD
Trigger: GTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCC...GGAGATCTGGCTCAAGAATTCCATCCGCTCCCTGGATGCCCTGCACAACATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CAA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACCCCTGGTCGGAGTCATaGACGGTGATCTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHPWSES*TVILRP
Trigger: GGGCCTCAAGATCACCGTCAATGACTCCGACCAGGG...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGAGCTGCAAGTTGAATTaGGCATTGGCTCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWSCKLN*ALAPWS
Trigger: CGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCT...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GAGCCAGATCTCCCCCGTGTGGGAATTGATGTCGAACACGTTGGCGGGCTCTGCCTTCCAGGTGTGATGTaGTGCAGGGCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: EPDLPRVGIDVEHVGGLCLPGVM*CRASRE
Trigger: CTCCCTGGATGCCCTGCACAACATCACACCTGGAAG...GCAGAGCCCGCCAACGTGTTCGACATCAATTCCCACACGGGGGAGATCTGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CAA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGGGTTTTGGCGGGGGTaGGGTCGGCTGCGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVGFWRG*GRLRSE
Trigger: CTCACTCCGCAGCCGACCCAACCCCCGCCAAAACCC...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCGGTGCCTTAAGTTaGGCTGCACCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPAGALS*AAPSSS
Trigger: AGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGC...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGGCAGGTGGACTGGCCTaGGATTCCCTCAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRAGGLA*DSLNAF
Trigger: GAAGGCGTTGAGGGAATCCAAGGCCAGTCCACCTGC...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS TCA 90 bp TCAGGGTGTATACGTGAGAGCCTACAGGGGTGTCCTCTGGGAGGCTaGACAGAGCCATGTTTCCGTTGGTGCTGCCGACCCCGTTGTCGA +
Preference number: 5 (lower is better)
Translates to: SGCIRESLQGCPLGG*TEPCFRWCCRPRCR
Trigger: TCGACAACGGGGTCGGCAGCACCAACGGAAACATGGCTCTGTTCAGCCTCCCAGAGGACACCCCTGTAGGCTCTCACGTATACACCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623527.4
CDS CCA 90 bp CAAGGCTGTAGAGAATTCGATTGGGTTTGCCCCGGTCTCCATCCATaGCGACCACCTTCAGTACCTCCGAGCCCGGAAGGGTGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: QGCREFDWVCPGLHP*RPPSVPPSPEGCPR
Trigger: ACGAGGACACCCTTCCGGGCTCGGAGGTACTGAAGGTGGTCGCCATGGATGGAGACCGGGGCAAACCCAATCGAATTCTCTACAGCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332904.7
ENST00000372117.6
ENST00000623527.4
CDS CCA 90 bp TGTATCTGGATCCACAGCTGTGACAGCCACCACGCTGGAGCCCCCTaGGGCGTTCTCAGGAATCCTGGCAACGTAGTAGAGGGAGTCGAA +
Preference number: 5 (lower is better)
Translates to: CIWIHSCDSHHAGAP*GVLRNPGNVVEGVE
Trigger: TTCGACTCCCTCTACTACGTTGCCAGGATTCCTGAGAACGCCCCAGGGGGCTCCAGCGTGGTGGCTGTCACAGCTGTGGATCCAGATACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332904.7
ENST00000622973.1
ENST00000623527.4
CDS-3UTR CAA 90 bp GTCGGAGTCATTGACGGTGATCTTGAGGCCCCGCAGGATCTCTCCCTGGGGTGGAATGTTGGCGGGTGGTaGTTGAGGTCCACAATCCTG +
Preference number: 5 (lower is better)
Translates to: VGVIDGDLEAPQDLSLGWNVGGW*LRSTIL
Trigger: CAGGATTGTGGACCTCAACAACCACCCGCCAACATT...CCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGACTCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp CTGTATCAGGAAGGCAGCCATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATTCCCCCGTGTGGGAATaGATGTCGAACACGTTGGCG +
Preference number: 5 (lower is better)
Translates to: LYQEGSHGAPGEGLSICDSPVWE*MSNTLA
Trigger: CGCCAACGTGTTCGACATCAATTCCCACACGGGGGA...ATCACAGATGCTGAGACCCTCTCCCGGAGCCCCATGGCTGCCTTCCTGATACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACTTCCAGGTGTGATGTaGTGCAGGGCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPLPGVM*CRASRE
Trigger: CTCCCTGGATGCCCTGCACAACATCACACCTGGAAG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAGGGGAGCCCCGGTCCTaGGCCTGCACCTCTAGGGAC +
Preference number: 5 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPGEPRS*ACTSRD
Trigger: GTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCC...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCGCGGCTTTGGTGCTCTaGGACTTGAGCCACTCAATG +
Preference number: 5 (lower is better)
Translates to: AFLQPTRFADLQPETVLSAALVL*DLSHSM
Trigger: CATTGAGTGGCTCAAGTCCAAGAGCACCAAAGCCGC...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTCTTTGAGCATGAACTaGGTAGCGGCTTTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWSLSMN*VAALVL
Trigger: GAGCACCAAAGCCGCTACCAAGTTCATGCTCAAAGA...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTGGGTTTTGGCGGGGGTaGGGTCGGCTGCGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: APGLLESTSCLILFTLGTGFWRG*GRLRSE
Trigger: CTCACTCCGCAGCCGACCCAACCCCCGCCAAAACCC...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCTGGGCTTGTCCTGTTaGGGAGAAAAGTCCAGTAGA +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWLGLSC*GEKSSR
Trigger: TCTACTGGACTTTTCTCCCAAACAGGACAAGCCCAG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTGCTGAGCTTGGTGGCCAAGGCCTaGAAGACTGTCAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: AFLQPTRFADLQPETVLSLVAKA*KTVRMC
Trigger: GCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAA...GCTCAGCACTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS GCA 90 bp ACCCTGAAGTTCTGCACAGGACCACAGGGAGGCGCAGGGGAGTCGTaGCACAGGATCGTCCTGCATTGCCTAGGGAAGTCATTTACAAGG +
Preference number: 5 (lower is better)
Translates to: TLKFCTGPQGGAGES*HRIVLHCLGKSFTR
Trigger: CCTTGTAAATGACTTCCCTAGGCAATGCAGGACGATCCTGTGGCACGACTCCCCTGCGCCTCCCTGTGGTCCTGTGCAGAACTTCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp GGTGATCTTGAGGCCCCGCAGGATCTCTCCCTGGGGTGGGTGCTCATTCATGGAAGAATTCGATTGGGTTaGCCCCGGTCTCCATCCATG +
Preference number: 5 (lower is better)
Translates to: GDLEAPQDLSLGWVLIHGRIRLG*PRSPSM
Trigger: CATGGATGGAGACCGGGGCAAACCCAATCGAATTCT...TCCATGAATGAGCACCCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATCAGCTCAAACCTGTTTaGGGGTCCGCTCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: ATACQQMPTPLAGGLALDQLKPV*GSALSI
Trigger: TATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTG...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCATCATTGACGGTGATCTaGAGGCCCCGCAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPSLTVI*RPRRIS
Trigger: AGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGA...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACCCACCAGCTGCAAGTaGAATTTGGCATTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPPTSCK*NLALAP
Trigger: GGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGGGGGAGCCCCGGTCCTaGGCCTGCACCTCTAGGGAC +
Preference number: 5 (lower is better)
Translates to: CSDLQAKQKKLGGAHETEGEPRS*ACTSRD
Trigger: GTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCC...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAGGGGAGCCCCGGTCCTaGGCCTGCACCTCTAGGGAC +
Preference number: 5 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRGEPRS*ACTSRD
Trigger: GTCCCTAGAGGTGCAGGCCAAGGACCGGGGCTCCCC...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGGGACGTATTTGCCAATaGCATCCTAGAGCCCAATGT +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWGRICQ*HPRAQC
Trigger: ACATTGGGCTCTAGGATGCAATTGGCAAATACGTCC...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCACTGCCTGTCAACAGATGCCAACACCCCTGGCAGGTGGACTGGCCTTGGATTTAACCCCAGAGGCCTaGTATGACTTCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ATACQQMPTPLAGGLALDLTPEA*YDFCPG
Trigger: CCCAGGACAGAAGTCATACAAGGCCTCTGGGGTTAA...ATCCAAGGCCAGTCCACCTGCCAGGGGTGTTGGCATCTGTTGACAGGCAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGTCTGGGCTCCTGGATaGCTCGAGTCCACCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPVWAPG*LESTSC
Trigger: GCAAGAGGTGGACTCGAGCAATCCAGGAGCCCAGAC...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCGGTCCCGGATCCACTaGCAAGCCCAAGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAARSRIH*QAQASS
Trigger: GCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGGCCAGTTTGCAAGATaGGCTCTGCCTTGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPGQFAR*ALPWSK
Trigger: CTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCC...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGCTCCCTCTCCATCCCTaGGTGGCCAAGGCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQLPLHP*VAKALK
Trigger: CTTCAAGGCCTTGGCCACCAAGGGATGGAGAGGGAG...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS TCA 90 bp TTAATTTCAAAGGCTCCATCGTTCCCTGTCAAGGGAGATGCACCCTaGAGTTCTGCACAGGACCACAGGGAGGCGCAGGGGAGTCGTGCC +
Preference number: 5 (lower is better)
Translates to: LISKAPSFPVKGDAP*SSAQDHREAQGSRA
Trigger: GGCACGACTCCCCTGCGCCTCCCTGTGGTCCTGTGCAGAACTTCAGGGTGCATCTCCCTTGACAGGGAACGATGGAGCCTTTGAAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS GCA 90 bp CAGGAAGTAGGTGACACTCCCTCCAGAGCCTGTGTCCCTGTCCACTaGATGGACCTTAAAGATGATGCTCCCAGCAGGTATGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: QEVGDTPSRACVPVH*MDLKDDAPSRYVLG
Trigger: CCCGAGGACATACCTGCTGGGAGCATCATCTTTAAGGTCCATGCAGTGGACAGGGACACAGGCTCTGGAGGGAGTGTCACCTACTTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623527.4
CDS GCA 90 bp CTCTGCATGGGTGATGGAATAGTCCACCAGGTTGTTGGGTTCCTCTaGATCCTCGTCTATGGCCTGTGCGCAGGGAGAGACAGACAGAGC +
Preference number: 5 (lower is better)
Translates to: LCMGDGIVHQVVGFL*ILVYGLCAGRDRQS
Trigger: GCTCTGTCTGTCTCTCCCTGCGCACAGGCCATAGACGAGGATGCAGAGGAACCCAACAACCTGGTGGACTATTCCATCACCCATGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459673.1
CDS-3UTR CAA 90 bp CTGGGTCCCACCAGCTGCAAGTTGAATTTGGCATTGGCTCCCTGGTCGGAGTCAGTTGGCGGGTGGTTGTaGAGGTCCACAATCCTGATG +
Preference number: 5 (lower is better)
Translates to: LGPTSCKLNLALAPWSESVGGWL*RSTILM
Trigger: CATCAGGATTGTGGACCTCAACAACCACCCGCCAAC...TGACTCCGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACAGCTCAAACCTGTTTaGGGGTCCGCTCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPQLKPV*GSALSI
Trigger: TATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCCCTGGTCGGAGTCATaGACGGTGATCTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAAPWSES*TVILRP
Trigger: GGGCCTCAAGATCACCGTCAATGACTCCGACCAGGG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CATGGACAGCTCAAACCTGTTTTGGGGTCCGCTCTCTCCATAGAATGTTGGCGGCCCTGGTCGGAGTCATaGACGGTGATCTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: HGQLKPVLGSALSIECWRPWSES*TVILRP
Trigger: GGGCCTCAAGATCACCGTCAATGACTCCGACCAGGG...CCGCCAACATTCTATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTGTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp GGTGATCTTGAGGCCCCGCAGGATCTCTCCCTGGGGTGGGTGCTCATTCATGGAAAGTTGAATTTGGCATaGGCTCCCTGGTCGGAGTCA +
Preference number: 5 (lower is better)
Translates to: GDLEAPQDLSLGWVLIHGKLNLA*APWSES
Trigger: TGACTCCGACCAGGGAGCCAATGCCAAATTCAACTT...TCCATGAATGAGCACCCACCCCAGGGAGAGATCCTGCGGGGCCTCAAGATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGCACAATGATTGTGACTaGGGCTTCATTCAGGACTGT +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWHNDCD*GFIQDC
Trigger: ACAGTCCTGAATGAAGCCCAAGTCACAATCATTGTG...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CAGGGAGCGGATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCTTGATGTCGAACACGTaGGCGGGCTCTGCATGGGTG +
Preference number: 5 (lower is better)
Translates to: QGADGILEPDLPRVGIDVLMSNT*AGSAWV
Trigger: CACCCATGCAGAGCCCGCCAACGTGTTCGACATCAA...GACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CAA 90 bp GTCGAACACGTTGGCGGGCTCTGCATGGGTGATGGAATAGTCCACCAGGTTGTTGAGCGGATGGAATTCTaGAGCCAGATCTCCCCCGTG +
Preference number: 5 (lower is better)
Translates to: VEHVGGLCMGDGIVHQVVERMEF*SQISPV
Trigger: CACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTC...AACAACCTGGTGGACTATTCCATCACCCATGCAGAGCCCGCCAACGTGTTCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CAA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGCTAGAGCCCAATGTCTaGCCCAAGGCCCTGACTAGA +
Preference number: 5 (lower is better)
Translates to: MLATGHFPIHGQFARLALLEPNV*PKALTR
Trigger: TCTAGTCAGGGCCTTGGGCAAGACATTGGGCTCTAG...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGAGTAGTGCCAAGGATTaGAGTAACGGGGACGTATTT +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWSSAKD*SNGDVF
Trigger: AAATACGTCCCCGTTACTCAAATCCTTGGCACTACT...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTTTCATGCCCACCCTAGGCCTCCCAATTCCTGCCCTTGCCGGGCTGCACTGGTGGCAAATTAAAGACTaGGAGCTCTGGTTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: AFMPTLGLPIPALAGLHWWQIKD*ELWFSL
Trigger: CAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCA...CCAGTGCAGCCCGGCAAGGGCAGGAATTGGGAGGCCTAGGGTGGGCATGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTCGGTCCCGGATCCACTaGCAAGCCCAAGCTTCCAGC +
Preference number: 5 (lower is better)
Translates to: DVFANCILEPNVLPKALTRSRIH*QAQASS
Trigger: GCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCG...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTAGGGACCATAGGCAGTCCCTTCCAGGTGTGATGTTGTGCAGGGCATCCAGGATCCTCGTCTATGGCTaGCCTTCCATGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SRDHRQSLPGVMLCRASRILVYG*PSMSSA
Trigger: GGCAGAGGACATGGAAGGCAAGCCATAGACGAGGAT...CCTGGATGCCCTGCACAACATCACACCTGGAAGGGACTGCCTATGGTCCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS CCA 90 bp GGGTGGTGGAGGGAGAGCCGGAGCTCTCGGGAGCAGAGAGCTTTCTaGGCTGTTGTTGTTACAGTTCTCATTGGGAGGTTTCTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: GWWRESRSSREQRAF*AVVVTVLIGRFLFE
Trigger: CTCAAAGAGAAACCTCCCAATGAGAACTGTAACAACAACAGCCCAGAAAGCTCTCTGCTCCCGAGAGCTCCGGCTCTCCCTCCACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372117.6
ENST00000459673.1
ENST00000623527.4
CDS-3UTR CAA 90 bp AGGGGAGAGCCAGGAGCATGTTGGTGGGTAGGGAAGTATTCAGTTGCTTCTGTAAGAGCCATGTTTCCGTaGGTGCTGCCGACCCCGTTG +
Preference number: 5 (lower is better)
Translates to: RGEPGACWWVGKYSVASVRAMFP*VLPTPL
Trigger: CAACGGGGTCGGCAGCACCAACGGAAACATGGCTCT...TACAGAAGCAACTGAATACTTCCCTACCCACCAACATGCTCCTGGCTCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGAAGTTGAATTTGGCATaGGCTCCCTGGTCGGAGTCA +
Preference number: 5 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRKLNLA*APWSES
Trigger: TGACTCCGACCAGGGAGCCAATGCCAAATTCAACTT...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCGAGCGGATGGAATTCTaGAGCCAGATCTCCCCCGTG +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAAERMEF*SQISPV
Trigger: CACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTC...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCTTCCAGGTGTGATGTaGTGCAGGGCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAALPGVM*CRASRE
Trigger: CTCCCTGGATGCCCTGCACAACATCACACCTGGAAG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGGGCTTCCCATAGTTTaGGGTTTTGGCGGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVGLPIV*GFGGGW
Trigger: CCAACCCCCGCCAAAACCCAAAACTATGGGAAGCCC...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAGCTCAGAGATCAGAGTaGACTGGACGGGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGAQRSE*TGRGFP
Trigger: TGGGAAGCCCCGTCCAGTCAACTCTGATCTCTGAGC...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACATCAACTGCCCTGAATaGTCTCTTCAAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHINCPE*SLQGWL
Trigger: CAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGAT...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGAAGATTGGCTCTGCCTaGGTCCAAGTTCCTGGGGTT +
Preference number: 5 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEKIGSA*VQVPGV
Trigger: AACCCCAGGAACTTGGACCAAGGCAGAGCCAATCTT...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS GCA 90 bp CTCCATCGTTCCCATTTACAAGGCTGTAGAGAATTCGATTGGGTTTaGCCCGGTCTCCATCCATGGCGACCACCTTCAGTACCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: LHRSHLQGCREFDWV*PGLHPWRPPSVPPS
Trigger: GCTCGGAGGTACTGAAGGTGGTCGCCATGGATGGAGACCGGGGCAAACCCAATCGAATTCTCTACAGCCTTGTAAATGGGAACGATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332904.7
ENST00000372117.6
ENST00000623527.4
CDS GCA 90 bp TGTCTCATTAATTTCAAAGGCTCCATCGTTCCCTGTCAAGGGAGATaGACCCTGAAGTTCTGCACAGGACCACAGGGAGGCGCAGGGGAG +
Preference number: 5 (lower is better)
Translates to: CLINFKGSIVPCQGR*TLKFCTGPQGGAGE
Trigger: CTCCCCTGCGCCTCCCTGTGGTCCTGTGCAGAACTTCAGGGTGCATCTCCCTTGACAGGGAACGATGGAGCCTTTGAAATTAATGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS CCA 90 bp GGGCGTTCTCAGGAATCCTGGCAACGTAGTAGAGGGAGTCGAACTTaGGGACATTGTCATTGGTGTCCAGGAGCTGGATCACAACATCCG +
Preference number: 5 (lower is better)
Translates to: GRSQESWQRSRGSRT*GHCHWCPGAGSQHP
Trigger: CGGATGTTGTGATCCAGCTCCTGGACACCAATGACAATGTCCCCAAGTTCGACTCCCTCTACTACGTTGCCAGGATTCCTGAGAACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332904.7
ENST00000622973.1
ENST00000623527.4
CDS-3UTR CAA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCGTTGGCGGGTGGTTGTaGAGGTCCACAATCCTGATG +
Preference number: 5 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATVGGWL*RSTILM
Trigger: CATCAGGATTGTGGACCTCAACAACCACCCGCCAAC...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGTCATTGACGGTGATCTaGAGGCCCCGCAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVSLTVI*RPRRIS
Trigger: AGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGA...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTAGCTGCAAGTTGAATTaGGCATTGGCTCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPSCKLN*ALAPWS
Trigger: CGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCT...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GGGTCCCACCAGCTGCAAGTTGAATTTGGCATTGGCTCCCTGGTCGGAGTCATTAGCTGCAAGTTGAATTaGGCATTGGCTCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GSHQLQVEFGIGSLVGVISCKLN*ALAPWS
Trigger: CGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCT...AATGACTCCGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCCCCACCAGCTGCAAGTaGAATTTGGCATTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTPTSCK*NLALAP
Trigger: GGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGG...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AGGACTGTCTGTGGAACCACTCGGAAGATGCCCCTGGGTCCCACCAGCTGCAAGCACAATGATTGTGACTaGGGCTTCATTCAGGACTGT +
Preference number: 5 (lower is better)
Translates to: RTVCGTTRKMPLGPTSCKHNDCD*GFIQDC
Trigger: ACAGTCCTGAATGAAGCCCAAGTCACAATCATTGTG...CTTGCAGCTGGTGGGACCCAGGGGCATCTTCCGAGTGGTTCCACAGACAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGTCAGCTACGCTGTACTaGCCTTCCATGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVSATLY*PSMSSA
Trigger: GGCAGAGGACATGGAAGGCAAGTACAGCGTAGCTGA...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCTCAGCTACGCTGTACTaGCCTTCCATGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTSATLY*PSMSSA
Trigger: GGCAGAGGACATGGAAGGCAAGTACAGCGTAGCTGA...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTTCCCCCGTGTGGGAATaGATGTCGAACACGTTGGCG +
Preference number: 5 (lower is better)
Translates to: APGLLESTSCLILFTLGTSPVWE*MSNTLA
Trigger: CGCCAACGTGTTCGACATCAATTCCCACACGGGGGA...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTCTGTGATGTCAATCTaGAGTAAGGCTGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRSVMSI*SKAVVL
Trigger: CAGCACCACAGCCTTACTCAAGATTGACATCACAGA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTGGGGGTCGAAGAATGGATCCACCTGCTGAAGCAGCCAGGAGGCAAGTTGAGTTCATGGGGTTGTCCTaGGTCTGTATCAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: SGGRRMDPPAEAARRQVEFMGLS*VCIRKA
Trigger: TGCCTTCCTGATACAGACCAAGGACAACCCCATGAA...CTCAACTTGCCTCCTGGCTGCTTCAGCAGGTGGATCCATTCTTCGACCCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTTGGTGCTCTTGGACTaGAGCCACTCAATGCGGATG +
Preference number: 5 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQLVLLD*SHSMRM
Trigger: CATCCGCATTGAGTGGCTCAAGTCCAAGAGCACCAA...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGACTAGAGCCCAATGTCTaGCCCAAGGCCCTGACTAGA +
Preference number: 5 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGLEPNV*PKALTR
Trigger: TCTAGTCAGGGCCTTGGGCAAGACATTGGGCTCTAG...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGGACGTATTTGCCAATaGCATCCTAGAGCCCAATGT +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPGRICQ*HPRAQC
Trigger: ACATTGGGCTCTAGGATGCAATTGGCAAATACGTCC...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCCTGTCCTGGGGAAGGTaGTCACAAGCTGATAAGGGC +
Preference number: 5 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATLSWGR*SQADKG
Trigger: GCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAG...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCTGTCCTGGGGAAGGTaGTCACAAGCTGATAAGGGC +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAALSWGR*SQADKG
Trigger: GCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGGCTCGAGTCCACCTCTaGCTTAATACTGTTCACGTT +
Preference number: 5 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRARVHL*LNTVHV
Trigger: AACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGC...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGGCCAGTTTGCAAGATaGGCTCTGCCTTGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVGQFAR*ALPWSK
Trigger: CTTGGACCAAGGCAGAGCCAATCTTGCAAACTGGCC...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGCCATCCATGGCCAGTTaGCAAGATTGGCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQPSMAS*QDWLCL
Trigger: AAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGG...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGCTGGGCGCCTCATCATaGGCATCGGTCACCAGGATC +
Preference number: 5 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHELGASS*ASVTRI
Trigger: GATCCTGGTGACCGATGCCAATGATGAGGCGCCCAG...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp CGCAGGGCTCATTTCAGTCACCTGTACATGCAGCTCATACACCTCTCTCTGGAGCAGCTCAAACCTGTTTaGGGGTCCGCTCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: RRAHFSHLYMQLIHLSLEQLKPV*GSALSI
Trigger: TATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTG...CTCCAGAGAGAGGTGTATGAGCTGCATGTACAGGTGACTGAAATGAGCCCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp GATTGTGACTTGGGCTTCATTCAGGACTGTCTGTGGAACCACTCGGAAGATGCCTCATTGACGGTGATCTaGAGGCCCCGCAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: DCDLGFIQDCLWNHSEDASLTVI*RPRRIS
Trigger: AGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGA...GGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGTCACAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGCCCTGGTCGGAGTCATaGACGGTGATCTTGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMPWSES*TVILRP
Trigger: GGGCCTCAAGATCACCGTCAATGACTCCGACCAGGG...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp AGAGACGACAGTGCTTCCCAAGCTTTCATGCCCACCCTAGGCCTCCCAATTCCTAAGTTGAATTTGGCATaGGCTCCCTGGTCGGAGTCA +
Preference number: 5 (lower is better)
Translates to: RDDSASQAFMPTLGLPIPKLNLA*APWSES
Trigger: TGACTCCGACCAGGGAGCCAATGCCAAATTCAACTT...AGGAATTGGGAGGCCTAGGGTGGGCATGAAAGCTTGGGAAGCACTGTCGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp ATGGGGCTCCGGGAGAGGGTCTCAGCATCTGTGATGTCAATCTTGAGTAAGGCTTTGGGGACATTGTCATaGGTGTCCAGGAGCTGGATC +
Preference number: 5 (lower is better)
Translates to: MGLRERVSASVMSILSKALGTLS*VSRSWI
Trigger: GATCCAGCTCCTGGACACCAATGACAATGTCCCCAA...AGCCTTACTCAAGATTGACATCACAGATGCTGAGACCCTCTCCCGGAGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CAA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCTTGATGTCGAACACGTaGGCGGGCTCTGCATGGGTG +
Preference number: 5 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITLMSNT*AGSAWV
Trigger: CACCCATGCAGAGCCCGCCAACGTGTTCGACATCAA...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCATCCCCCGTGTGGGAATaGATGTCGAACACGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPSPVWE*MSNTLA
Trigger: CGCCAACGTGTTCGACATCAATTCCCACACGGGGGA...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TACCTCTATAGCTCCAGCTTTGACATTTTGCGGCTCAGGGCAGTCCTGGCTGGAAACTTGGTAGCGGCTTaGGTGCTCTTGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: YLYSSSFDILRLRAVLAGNLVAA*VLLDLS
Trigger: GCTCAAGTCCAAGAGCACCAAAGCCGCTACCAAGTT...TCCAGCCAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTGGACTGGCCTTGGATTCCCTCAACGCCTTCAGTCCCTAAAAATAGAATCACCGGGCTTCCCATAGTTTaGGGTTTTGGCGGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: VDWPWIPSTPSVPKNRITGLPIV*GFGGGW
Trigger: CCAACCCCCGCCAAAACCCAAAACTATGGGAAGCCC...GGTGATTCTATTTTTAGGGACTGAAGGCGTTGAGGGAATCCAAGGCCAGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCGCTCAGAGATCAGAGTaGACTGGACGGGGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: LSNGDVFANCILEPNVLPAQRSE*TGRGFP
Trigger: TGGGAAGCCCCGTCCAGTCAACTCTGATCTCTGAGC...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACCTTCTTCTCAAACTTTaGCTTGAGCTCAGAGATCAG +
Preference number: 5 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHLLLKL*LELRDQ
Trigger: CTGATCTCTGAGCTCAAGCAAAAGTTTGAGAAGAAG...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGCATCTGCCCTCACTCTaGGCAAGATCAATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQHLPSL*ARSIFH
Trigger: GTGGAAGATTGATCTTGCCAAGAGTGAGGGCAGATG...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTTCCAGCTTTGACATTTaGCGGCTCAGGGCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: DVFANCILEPNVLPKALTSSFDI*RLRAVL
Trigger: CAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGA...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCAGCCTAGAGGTCTTTAGGTGGCAAATTAAAGACTaGGAGCTCTGGTTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: PRSRIHLQAQASSLEVFRWQIKD*ELWFSL
Trigger: CAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCA...CCTAAAGACCTCTAGGCTGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCATGTCACATCCATTTATaGTCCATGAGGCTACAGCTC +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPCHIHL*SMRLQL
Trigger: GAGCTGTAGCCTCATGGACAATAAATGGATGTGACA...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp ACTTGGGCTTCATTCAGGACTGTCTGTGGAACCACTCGGAAGATGCCCCTGGGTCAGGATCGTCCTGCATaGCCTAGGGAAGTCATTTAC +
Preference number: 5 (lower is better)
Translates to: TWASFRTVCGTTRKMPLGQDRPA*PREVIY
Trigger: GTAAATGACTTCCCTAGGCAATGCAGGACGATCCTG...ACCCAGGGGCATCTTCCGAGTGGTTCCACAGACAGTCCTGAATGAAGCCCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS GCA 90 bp TGTGATAAACACCTCAGCTACGCTGTACTTGCCTTCCATGTCCTCTaGCTTCACATAGAAGTTGTACCTGGCAGTGGCCTCAGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: CDKHLSYAVLAFHVL*LHIEVVPGSGLSVQ
Trigger: CTGGACGCTGAGGCCACTGCCAGGTACAACTTCTATGTGAAGGCAGAGGACATGGAAGGCAAGTACAGCGTAGCTGAGGTGTTTATCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332904.7
ENST00000372117.6
ENST00000623527.4
CDS CCA 90 bp CAAAGGCTCCATCGTTCCCATTTACAAGGCTGTAGAGAATTCGATTaGGTTTGCCCCGGTCTCCATCCATGGCGACCACCTTCAGTACCT +
Preference number: 5 (lower is better)
Translates to: QRLHRSHLQGCREFD*VCPGLHPWRPPSVP
Trigger: AGGTACTGAAGGTGGTCGCCATGGATGGAGACCGGGGCAAACCCAATCGAATTCTCTACAGCCTTGTAAATGGGAACGATGGAGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332904.7
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp ATGCTGGCTACCGGGCACTTCCCCATCCATGGCCAGTTTGCAAGATTGGCTCTGTCAACAGCCAGGAGCTaGAAGGTTAATACTTTGGAC +
Preference number: 5 (lower is better)
Translates to: MLATGHFPIHGQFARLALSTARS*KVNTLD
Trigger: GTCCAAAGTATTAACCTTCAAGCTCCTGGCTGTTGA...CAGAGCCAATCTTGCAAACTGGCCATGGATGGGGAAGTGCCCGGTAGCCAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTTTGGGGACATTGTCATaGGTGTCCAGGAGCTGGATC +
Preference number: 5 (lower is better)
Translates to: APGLLESTSCLILFTLGTLGTLS*VSRSWI
Trigger: GATCCAGCTCCTGGACACCAATGACAATGTCCCCAA...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp AGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGTTGATGTCGAACACGTaGGCGGGCTCTGCATGGGTG +
Preference number: 5 (lower is better)
Translates to: SGCSDLQAKQKKLGGAHELMSNT*AGSAWV
Trigger: CACCCATGCAGAGCCCGCCAACGTGTTCGACATCAA...CTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGTCCCCCGTGTGGGAATaGATGTCGAACACGTTGGCG +
Preference number: 5 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVSPVWE*MSNTLA
Trigger: CGCCAACGTGTTCGACATCAATTCCCACACGGGGGA...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp TGTCACCATCATGAAATAGCCTGGGCTACCATGAAGGTGAGAGTGGATGTTCAGTCCCCCGTGTGGGAATaGATGTCGAACACGTTGGCG +
Preference number: 5 (lower is better)
Translates to: CHHHEIAWATMKVRVDVQSPVWE*MSNTLA
Trigger: CGCCAACGTGTTCGACATCAATTCCCACACGGGGGA...CTGAACATCCACTCTCACCTTCATGGTAGCCCAGGCTATTTCATGATGGTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp AAGGTGAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGGAGCGGATGGAATTCTaGAGCCAGATCTCCCCCGTG +
Preference number: 5 (lower is better)
Translates to: KVRVDVQTFKPSKRSLVVERMEF*SQISPV
Trigger: CACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTC...CACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTCACCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAGAGCGGATGGAATTCTaGAGCCAGATCTCCCCCGTG +
Preference number: 5 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRERMEF*SQISPV
Trigger: CACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTC...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACTTCCAGGTGTGATGTaGTGCAGGGCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRLPGVM*CRASRE
Trigger: CTCCCTGGATGCCCTGCACAACATCACACCTGGAAG...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp TGTCACCATCATGAAATAGCCTGGGCTACCATGAAGGTGAGAGTGGATGTTCAGCTTCCAGGTGTGATGTaGTGCAGGGCATCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: CHHHEIAWATMKVRVDVQLPGVM*CRASRE
Trigger: CTCCCTGGATGCCCTGCACAACATCACACCTGGAAG...CTGAACATCCACTCTCACCTTCATGGTAGCCCAGGCTATTTCATGATGGTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTCTGTGATGTCAATCTaGAGTAAGGCTGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQSVMSI*SKAVVL
Trigger: CAGCACCACAGCCTTACTCAAGATTGACATCACAGA...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTCGAACACGTTGGCGGGCTCTGCATGGGTGATGGAATAGTCCACCAGGTTGTTTCTGTGATGTCAATCTaGAGTAAGGCTGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: VEHVGGLCMGDGIVHQVVSVMSI*SKAVVL
Trigger: CAGCACCACAGCCTTACTCAAGATTGACATCACAGA...AACAACCTGGTGGACTATTCCATCACCCATGCAGAGCCCGCCAACGTGTTCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CAA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGTTCATGGGGTTGTCCTaGGTCTGTATCAGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVFMGLS*VCIRKA
Trigger: TGCCTTCCTGATACAGACCAAGGACAACCCCATGAA...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCTCTTTGAGCATGAACTaGGTAGCGGCTTTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATSLSMN*VAALVL
Trigger: GAGCACCAAAGCCGCTACCAAGTTCATGCTCAAAGA...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCATTGTTACAGTTCTCATaGGGAGGTTTCTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPLLQFS*GGFSLS
Trigger: GCTCAAAGAGAAACCTCCCAATGAGAACTGTAACAA...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTCTTTCTGGGCTGTTGTaGTTACAGTTCTCATTGGGA +
Preference number: 5 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPLSGLL*LQFSLG
Trigger: TCCCAATGAGAACTGTAACAACAACAGCCCAGAAAG...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTCCATCCCTTGGTGGCCAAGGCCTTGAAGACTGTCAGGATGTGCCACTGCCTGAGCTTTCTGGGCTGTaGTTGTTACAGTTCTCATTG +
Preference number: 5 (lower is better)
Translates to: SPSLGGQGLEDCQDVPLPELSGL*LLQFSL
Trigger: CAATGAGAACTGTAACAACAACAGCCCAGAAAGCTC...AGGCAGTGGCACATCCTGACAGTCTTCAAGGCCTTGGCCACCAAGGGATGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp TCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAATTCTCAAACTTTTGCTaGAGCTCAGAGATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SWGCPRDHPRSRIHLQAQFSNFC*SSEIRV
Trigger: AACTCTGATCTCTGAGCTCAAGCAAAAGTTTGAGAA...TTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTTGCAAGCCCAAGCTTCCACTTCTTCTCAAACTTTaGCTTGAGCTCAGAGATCAG +
Preference number: 5 (lower is better)
Translates to: VVQETTLGPGSTCKPKLPLLLKL*LELRDQ
Trigger: CTGATCTCTGAGCTCAAGCAAAAGTTTGAGAAGAAG...TGGAAGCTTGGGCTTGCAAGTGGATCCGGGACCGAGGGTGGTCTCTTGGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCCCAGGGCCCTGCTGCTaGACTAAGGATGATGATGAG +
Preference number: 5 (lower is better)
Translates to: LSNGDVFANCILEPNVLPPGPCC*TKDDDE
Trigger: CTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTGG...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CTTGGTCCAAGTTCCTGGGGTTGTCCAAGAGACCACCCTCGGTCCCGGATCCACTGTATTCTAGAGGGGTaGTTAGTAAGTAGAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LGPSSWGCPRDHPRSRIHCILEG*LVSRAK
Trigger: TTTGGCTCTACTTACTAACAACCCCTCTAGAATACA...GTGGATCCGGGACCGAGGGTGGTCTCTTGGACAACCCCAGGAACTTGGACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GGCGCTTGGCAGAGTAGATGTGAGGCTCCTAATACTTTCTGGAAGAGCTGCACCCTGGAAAGTACTTATTaGCTCAGTCTGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GAWQSRCEAPNTFWKSCTLESTY*LSLGSW
Trigger: CCAGGAGCCCAGACTGAGCAAATAAGTACTTTCCAG...GGTGCAGCTCTTCCAGAAAGTATTAGGAGCCTCACATCTACTCTGCCAAGCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTCCATCCATGGCCAGTTaGCAAGATTGGCTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: APGLLESTSCLILFTLGTPSMAS*QDWLCL
Trigger: AAGGCAGAGCCAATCTTGCAAACTGGCCATGGATGG...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AAATTTAGGGAGAGGGAAAATGGTCTAGGGAGGATTTCTGAGAATCTGATACTTGTGCTGCCGACCCCGTaGTCGAAGAAGTGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: KFRERENGLGRISENLILVLPTP*SKKCGA
Trigger: CGCCCCGCACTTCTTCGACAACGGGGTCGGCAGCAC...AAGTATCAGATTCTCAGAAATCCTCCCTAGACCATTTTCCCTCTCCCTAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAGAATTCGATTGGGTTaGCCCCGGTCTCCATCCATG +
Preference number: 5 (lower is better)
Translates to: LSNGDVFANCILEPNVLPRIRLG*PRSPSM
Trigger: CATGGATGGAGACCGGGGCAAACCCAATCGAATTCT...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAGTTGGCGGGTGGTTGTaGAGGTCCACAATCCTGATG +
Preference number: 5 (lower is better)
Translates to: VDVQTFKPSKRSLVVHMRVGGWL*RSTILM
Trigger: CATCAGGATTGTGGACCTCAACAACCACCCGCCAAC...TCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCAAATGTTGGCGGGTGGTaGTTGAGGTCCACAATCCTG +
Preference number: 5 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPNVGGW*LRSTIL
Trigger: CAGGATTGTGGACCTCAACAACCACCCGCCAACATT...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGTCATTGACGGTGATCTaGAGGCCCCGCAGGATCTCT +
Preference number: 5 (lower is better)
Translates to: CSDLQAKQKKLGGAHETESLTVI*RPRRIS
Trigger: AGAGATCCTGCGGGGCCTCAAGATCACCGTCAATGA...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATCCCACCAGCTGCAAGTaGAATTTGGCATTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHPTSCK*NLALAP
Trigger: GGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGG...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp ATTCATGGACAGCTCAAACCTGTTTTGGGGTCCGCTCTCTCCATAGAATGTTGGCCCACCAGCTGCAAGTaGAATTTGGCATTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: IHGQLKPVLGSALSIECWPTSCK*NLALAP
Trigger: GGGAGCCAATGCCAAATTCAACTTGCAGCTGGTGGG...CCAACATTCTATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTGTCCATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624091.1
CDS-3UTR CAA 90 bp CAGGGAGCGGATGGAATTCTTGAGCCAGATCTCCCCCGTGTGGGAATTGATGTCTCAACAGCCAGGAGCTaGAAGGTTAATACTTTGGAC +
Preference number: 5 (lower is better)
Translates to: QGADGILEPDLPRVGIDVSTARS*KVNTLD
Trigger: GTCCAAAGTATTAACCTTCAAGCTCCTGGCTGTTGA...GACATCAATTCCCACACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000622973.1
CDS-3UTR CAA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGTCTGGATCCACAGCCTaGAAGGTTAATACTTTGGAC +
Preference number: 5 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQSGSTA*KVNTLD
Trigger: GTCCAAAGTATTAACCTTCAAGGCTGTGGATCCAGA...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372117.6
CDS-3UTR CAA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTTCCCCTTACCTACATTaGCTTTCCTACAGCCCACGA +
Preference number: 5 (lower is better)
Translates to: APGLLESTSCLILFTLGTSPYLH*LSYSPR
Trigger: TCGTGGGCTGTAGGAAAGCAAATGTAGGTAAGGGGA...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAGCCGGTGCCTTAAGTTaGGCTGCACCCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKAGALS*AAPSSS
Trigger: AGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGC...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCTCTGCAACCATACTTaGCACCCTGTGTTAATGAGG +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAALCNHT*HPVLMR
Trigger: CCTCATTAACACAGGGTGCAAAGTATGGTTGCAGAG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp TTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGGCTCATGCTGGCTACCCTTAGAGACCTCTCATaGTTCCTAACTCCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LSLAAPSSSFLVWLMLATLRDLS*FLTPLE
Trigger: TTCCAGGGGAGTTAGGAACAATGAGAGGTCTCTAAG...GGTAGCCAGCATGAGCCACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTGAACCCCTCCCTAGGTaGTTTGTGAGTTTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: APGLLESTSCLILFTLGTEPLPR*FVSFLR
Trigger: CCTTAGGAAACTCACAAACAACCTAGGGAGGGGTTC...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGAATTCGATTGGGTTaGCCCCGGTCTCCATCCATG +
Preference number: 5 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMRIRLG*PRSPSM
Trigger: CATGGATGGAGACCGGGGCAAACCCAATCGAATTCT...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp AGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGCAGCTCAAACCTGTTTaGGGGTCCGCTCTCTCCATA +
Preference number: 5 (lower is better)
Translates to: RVDVQTFKPSKRSLVVHMQLKPV*GSALSI
Trigger: TATGGAGAGAGCGGACCCCAAAACAGGTTTGAGCTG...CATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGAGCTGCAAGTTGAATTaGGCATTGGCTCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: CSDLQAKQKKLGGAHETESCKLN*ALAPWS
Trigger: CGACCAGGGAGCCAATGCCAAATTCAACTTGCAGCT...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp TGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATGAGACAGAGAGAGCCAGGAGCATGTaGGTGGGTAGGGAAGTATTC +
Preference number: 5 (lower is better)
Translates to: CSDLQAKQKKLGGAHETERARSM*VGREVF
Trigger: GAATACTTCCCTACCCACCAACATGCTCCTGGCTCT...CTCTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp GACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCAAGGCCCTGACTTTGGGAGGTTTCTCTTaGAGCATGAACTTGGTAGCG +
Preference number: 5 (lower is better)
Translates to: DVFANCILEPNVLPKALTLGGFS*SMNLVA
Trigger: CGCTACCAAGTTCATGCTCAAAGAGAAACCTCCCAA...AGTCAGGGCCTTGGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCTCCCCTTACCTACATTaGCTTTCCTACAGCCCACGA +
Preference number: 5 (lower is better)
Translates to: LSNGDVFANCILEPNVLPSPYLH*LSYSPR
Trigger: TCGTGGGCTGTAGGAAAGCAAATGTAGGTAAGGGGA...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TTGAGTAACGGGGACGTATTTGCCAATTGCATCCTAGAGCCCAATGTCTTGCCCCATCTGCCCTCACTCTaGGCAAGATCAATCTTCCAC +
Preference number: 5 (lower is better)
Translates to: LSNGDVFANCILEPNVLPHLPSL*ARSIFH
Trigger: GTGGAAGATTGATCTTGCCAAGAGTGAGGGCAGATG...GGGCAAGACATTGGGCTCTAGGATGCAATTGGCAAATACGTCCCCGTTACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCTTAATACTGTTCACGTaGGGGACTGTAGAAACCCCA +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAALILFT*GTVETP
Trigger: TGGGGTTTCTACAGTCCCCAACGTGAACAGTATTAA...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCCAGCCAGGAGGCAAGTaGAGCTTCACTGTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVQPGGK*SFTVCQ
Trigger: CTGACACACAGTGAAGCTCAACTTGCCTCCTGGCTG...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCTCCCAATTCCTGCCCTaGCCGGGCTGCACTGGTAGG +
Preference number: 5 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFSQFLP*PGCTGR
Trigger: CCTACCAGTGCAGCCCGGCAAGGGCAGGAATTGGGA...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATAAGTTGAATTTGGCATaGGCTCCCTGGTCGGAGTCA +
Preference number: 5 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHKLNLA*APWSES
Trigger: TGACTCCGACCAGGGAGCCAATGCCAAATTCAACTT...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATCCAAGCAAAAGAAGCTaGGTGGTGCACATGAGACAG +
Preference number: 5 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHPSKRS*VVHMRQ
Trigger: CTGTCTCATGTGCACCACCAAGCTTCTTTTGCTTGG...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCCGCATTGGCAGGACCTaGTTAGACTTCTTGTTGCGC +
Preference number: 5 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVRIGRT*LDFLLR
Trigger: GCGCAACAAGAAGTCTAACAAGGTCCTGCCAATGCG...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCTTGTTACAGTTCTCATaGGGAGGTTTCTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAALLQFS*GGFSLS
Trigger: GCTCAAAGAGAAACCTCCCAATGAGAACTGTAACAA...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTCTTTCTGGGCTGTTGTaGTTACAGTTCTCATTGGGA +
Preference number: 5 (lower is better)
Translates to: APGLLESTSCLILFTLGTLSGLL*LQFSLG
Trigger: TCCCAATGAGAACTGTAACAACAACAGCCCAGAAAG...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTTCCAGCTTTGACATTTaGCGGCTCAGGGCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: HLVKALITTIFFNPHPRPSSFDI*RLRAVL
Trigger: CAGGACTGCCCTGAGCCGCAAAATGTCAAAGCTGGA...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCCTTGTATGACTTCTGTCCTGGGGAAGGTTGTCACAAGCTGATAAGGGCTGCCCTGCAGAAAAATACTTaGCATTCATGCCGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: ALYDFCPGEGCHKLIRAALQKNT*HSCRFA
Trigger: TGCAAAGCGGCATGAATGCAAAGTATTTTTCTGCAG...GGCAGCCCTTATCAGCTTGTGACAACCTTCCCCAGGACAGAAGTCATACAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GCTCCTGGATTGCTCGAGTCCACCTCTTGCTTAATACTGTTCACGTTGGGGACTTGTCACATCCATTTATaGTCCATGAGGCTACAGCTC +
Preference number: 5 (lower is better)
Translates to: APGLLESTSCLILFTLGTCHIHL*SMRLQL
Trigger: GAGCTGTAGCCTCATGGACAATAAATGGATGTGACA...AGTCCCCAACGTGAACAGTATTAAGCAAGAGGTGGACTCGAGCAATCCAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CTACATTTGCTTTCCTACAGCCCACGAGGTTCGCTGACCTCCAGCCTGAGACAGGACTCTGCAGAGTATTaGGTGTCACATCCATTTATT +
Preference number: 5 (lower is better)
Translates to: LHLLSYSPRGSLTSSLRQDSAEY*VSHPFI
Trigger: AATAAATGGATGTGACACCAAATACTCTGCAGAGTC...CTGTCTCAGGCTGGAGGTCAGCGAACCTCGTGGGCTGTAGGAAAGCAAATGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp CAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAGAGGCCCAGAGAGACTaGACCTCTTGCCCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: QGLQMSCCSRYLHGNLDKEAQRD*TSCPKS
Trigger: TGACTTTGGGCAAGAGGTCAAGTCTCTCTGGGCCTC...TTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAGAATTCGATTGGGTTaGCCCCGGTCTCCATCCATG +
Preference number: 5 (lower is better)
Translates to: TRPANVLLFKISAWQFGQRIRLG*PRSPSM
Trigger: CATGGATGGAGACCGGGGCAAACCCAATCGAATTCT...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCCTCTATAAATTACCCAGTCTCGGGTATCTTTATTAGCAGCATGAGAACGAACTTGATGTCGAACACGTaGGCGGGCTCTGCATGGGTG +
Preference number: 5 (lower is better)
Translates to: SSINYPVSGIFISSMRTNLMSNT*AGSAWV
Trigger: CACCCATGCAGAGCCCGCCAACGTGTTCGACATCAA...GTTCGTTCTCATGCTGCTAATAAAGATACCCGAGACTGGGTAATTTATAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGGAGCGGATGGAATTCTaGAGCCAGATCTCCCCCGTG +
Preference number: 5 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTERMEF*SQISPV
Trigger: CACGGGGGAGATCTGGCTCAAGAATTCCATCCGCTC...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GAGAGTGGATGTTCAGACCTTCAAGCCAAGCAAAAGAAGCTTGGTGGTGCACATTCTGTGATGTCAATCTaGAGTAAGGCTGTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: ESGCSDLQAKQKKLGGAHSVMSI*SKAVVL
Trigger: CAGCACCACAGCCTTACTCAAGATTGACATCACAGA...ATGTGCACCACCAAGCTTCTTTTGCTTGGCTTGAAGGTCTGAACATCCACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000332904.7
ENST00000623399.1
CDS-3UTR CAA 90 bp ACAAGGCCTGCAAATGTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAACGCATTGGCAGGACCTaGTTAGACTTCTTGTTGCGC +
Preference number: 5 (lower is better)
Translates to: TRPANVLLFKISAWQFGQRIGRT*LDFLLR
Trigger: GCGCAACAAGAAGTCTAACAAGGTCCTGCCAATGCG...TTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGACATTTGCAGGCCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp CACTTGGTTAAAGCCCTCATCACCACTATTTTCTTCAATCCTCACCCTAGACCTAACTTGGTAGCGGCTTaGGTGCTCTTGGACTTGAGC +
Preference number: 5 (lower is better)
Translates to: HLVKALITTIFFNPHPRPNLVAA*VLLDLS
Trigger: GCTCAAGTCCAAGAGCACCAAAGCCGCTACCAAGTT...AGGTCTAGGGTGAGGATTGAAGAAAATAGTGGTGATGAGGGCTTTAACCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp AACACTTGCCGGTGCCTTAAGTTTGGCTGCACCCTCCTCCTCTTTCCTAGTGTGTTCTCAAACTTTTGCTaGAGCTCAGAGATCAGAGTT +
Preference number: 5 (lower is better)
Translates to: NTCRCLKFGCTLLLFPSVFSNFC*SSEIRV
Trigger: AACTCTGATCTCTGAGCTCAAGCAAAAGTTTGAGAA...CACACTAGGAAAGAGGAGGAGGGTGCAGCCAAACTTAAGGCACCGGCAAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCTCTATAGCTCCAGCTTaGACATTTTGCGGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVSIAPA*TFCGSG
Trigger: CCCTGAGCCGCAAAATGTCAAAGCTGGAGCTATAGA...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS-3UTR CAA 90 bp AGTGAGGGAAGAACAGAAGTAGAGGTGTGTGAGTCACGGCAATGCCATCATCCATTAATACTGTTCACGTaGGGGACTGTAGAAACCCCA +
Preference number: 5 (lower is better)
Translates to: SEGRTEVEVCESRQCHHPLILFT*GTVETP
Trigger: TGGGGTTTCTACAGTCCCCAACGTGAACAGTATTAA...TGGATGATGGCATTGCCGTGACTCACACACCTCTACTTCTGTTCTTCCCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCCTGGAAAGTACTTATTaGCTCAGTCTGGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVLESTY*LSLGSW
Trigger: CCAGGAGCCCAGACTGAGCAAATAAGTACTTTCCAG...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4
CDS CCA 90 bp GAGTACAGATTCACATTACTCAGATTGAATAAGGCAATTTCGCAGTaGGGATGCAAGAACAGACCCTGGCTGGAATGTGGTTTCTTGGGC +
Preference number: 5 (lower is better)
Translates to: EYRFTLLRLNKAISQ*GCKNRPWLECGFLG
Trigger: GCCCAAGAAACCACATTCCAGCCAGGGTCTGTTCTTGCATCCCCACTGCGAAATTGCCTTATTCAATCTGAGTAATGTGAATCTGTACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332904.7
CDS-3UTR CAA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCGTTGGCGGGTGGTTGTaGAGGTCCACAATCCTGATG +
Preference number: 5 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFVGGWL*RSTILM
Trigger: CATCAGGATTGTGGACCTCAACAACCACCCGCCAAC...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCATTTTCTTCATCTTGGCAAATTAAAGACTTGGAGCTCTGGTTCTCTCTGACGGCGGCTTTGGTGCTCTaGGACTTGAGCCACTCAATG +
Preference number: 5 (lower is better)
Translates to: SFSSSWQIKDLELWFSLTAALVL*DLSHSM
Trigger: CATTGAGTGGCTCAAGTCCAAGAGCACCAAAGCCGC...CGTCAGAGAGAACCAGAGCTCCAAGTCTTTAATTTGCCAAGATGAAGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp GTCCTGCTGTTCAAGATATCTGCATGGCAATTTGGACAAAAATTTTCAGCCTTCCCAGGGCCCTGCTGCTaGACTAAGGATGATGATGAG +
Preference number: 5 (lower is better)
Translates to: VLLFKISAWQFGQKFSAFPGPCC*TKDDDE
Trigger: CTCATCATCATCCTTAGTCAAGCAGCAGGGCCCTGG...GAAGGCTGAAAATTTTTGTCCAAATTGCCATGCAGATATCTTGAACAGCAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372117.6
ENST00000623527.4
CDS-3UTR CAA 90 bp TCTTGCCCAAAGTCACAATTAATGGCAGAACCAGAATTCAGACCTAGGGCTGTCATCAACTGCCCTGAATaGTCTCTTCAAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: SCPKSQLMAEPEFRPRAVINCPE*SLQGWL
Trigger: CAGCCATCCTTGAAGAGACAATTCAGGGCAGTTGAT...GACAGCCCTAGGTCTGAATTCTGGTTCTGCCATTAATTGTGACTTTGGGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000623527.4