RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD74 (Homo sapiens)

Ensembl gene IDs: ENSG00000019582

Ensembl transcript IDs: ENST00000009530.12, ENST00000353334.11, ENST00000377795.7, ENST00000517752.5, ENST00000517791.1, ENST00000518797.6, ENST00000522153.1, ENST00000522246.5, ENST00000523208.6, ENST00000523813.2, ENST00000523836.6, ENST00000524315.6

Found 779 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAATGCATGGCTGGAGGTGTCGGAGACCCAGGTTGGCATCCAGCTaGACCCTTGACTCGGGGCCCGGGGCCAGACCCTCCACCATCTGG +
Preference number: 1 (lower is better)
Translates to: GMHGWRCRRPRLASS*TLDSGPGARPSTIW
Trigger: CCAGATGGTGGAGGGTCTGGCCCCGGGCCCCGAGTCAAGGGTGCAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR GCA 90 bp CACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTaGCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATAGC +
Preference number: 1 (lower is better)
Translates to: HCSYGARGFWCWGPP*RWGRHTSSSRCSHS
Trigger: GCTATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR GCA 90 bp TGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATaGTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGC +
Preference number: 1 (lower is better)
Translates to: WGPPCRWGRHTSSSR*SHSTGVADSCRSRR
Trigger: GCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR CCA 90 bp GGGATCCCCATGGCTTCAGGAGCTGGGTCCAATTGCTCCCCATTGTaGGCCCAGAGCCTTGCACAGTGCTGGAGCAGGTGCATCACATGG +
Preference number: 1 (lower is better)
Translates to: GIPMASGAGSNCSPL*AQSLAQCWSRCITW
Trigger: CCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGGGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 90 bp GTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTaGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGA +
Preference number: 1 (lower is better)
Translates to: VPVTHCSYGARGFWC*GPPCRWGRHTSSSR
Trigger: TCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR CCA 90 bp CCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTaGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGT +
Preference number: 1 (lower is better)
Translates to: PPVPVTHCSYGARGF*CWGPPCRWGRHTSS
Trigger: ACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR TCA 90 bp CTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCTGAATaGACCCGGGTGGACAGCAGGGATGTGGCTGACCTCTTCCTGGCA +
Preference number: 1 (lower is better)
Translates to: LEWQIVAVLVALGPE*TRVDSRDVADLFLA
Trigger: TGCCAGGAAGAGGTCAGCCACATCCCTGCTGTCCACCCGGGTTCATTCAGGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR CCA 90 bp AGCTGCACCCTTGACTCGGGGCCCGGGGCCAGACCCTCCACCATCTaGCCTCTCTCCTCTCAAGCATGTTGCTCTAGAACAGAACTACAG +
Preference number: 1 (lower is better)
Translates to: SCTLDSGPGARPSTI*PLSSQACCSRTELQ
Trigger: CTGTAGTTCTGTTCTAGAGCAACATGCTTGAGAGGAGAGAGGCCAGATGGTGGAGGGTCTGGCCCCGGGCCCCGAGTCAAGGGTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 90 bp GGAGGAAGGGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTaGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTGC +
Preference number: 1 (lower is better)
Translates to: GGRVQAPSASGAHVS*KGLSRRHSGFPLAC
Trigger: GCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 90 bp TGTCTGTCTCCCACACTAGCCTGGGATCCCCATGGCTTCAGGAGCTaGGTCCAATTGCTCCCCATTGTGGGCCCAGAGCCTTGCACAGTG +
Preference number: 1 (lower is better)
Translates to: CLSPTLAWDPHGFRS*VQLLPIVGPEPCTV
Trigger: CACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGGGATCCCAGGCTAGTGTGGGAGACAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR GCA 90 bp GGGGAGGGTACGGGTAAGGGTAGTCCAGCTGTTCAGCTACGAGACTaGAGCGTTGCGAGTCGAGTTCCAGATTCCAGGCCAGCTCTACCA +
Preference number: 1 (lower is better)
Translates to: GEGTGKGSPAVQLRD*SVASRVPDSRPALP
Trigger: TGGTAGAGCTGGCCTGGAATCTGGAACTCGACTCGCAACGCTGCAGTCTCGTAGCTGAACAGCTGGACTACCCTTACCCGTACCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 90 bp GCCTCATGCTGGAAACAGCCAGAGGCAGTGCAGAAAAGGAATGCATaGCTGGAGGTGTCGGAGACCCAGGTTGGCATCCAGCTGCACCCT +
Preference number: 1 (lower is better)
Translates to: ASCWKQPEAVQKRNA*LEVSETQVGIQLHP
Trigger: AGGGTGCAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCCTTTTCTGCACTGCCTCTGGCTGTTTCCAGCATGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 90 bp TTCCAGGCCAGCTCTACCAACAAGCCCCAGTGTCCTCCCTGTGGATaGCTGCTCAGCTTTCAGGTCTTACCTGCTCCAGCAGGTGAGGAC +
Preference number: 1 (lower is better)
Translates to: FQASSTNKPQCPPCG*LLSFQVLPAPAGED
Trigger: GTCCTCACCTGCTGGAGCAGGTAAGACCTGAAAGCTGAGCAGCCATCCACAGGGAGGACACTGGGGCTTGTTGGTAGAGCTGGCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR GCA 90 bp TCTTGGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTaGATGTTGAGGCTATGGGTGACCGTGGTTAGTGGGACAGGCAGT +
Preference number: 1 (lower is better)
Translates to: SWKGLSRRHSGFPLA*MLRLWVTVVSGTGS
Trigger: ACTGCCTGTCCCACTAACCACGGTCACCCATAGCCTCAACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 90 bp CATGCTGGAAACAGCCAGAGGCAGTGCAGAAAAGGAATGCATGGCTaGAGGTGTCGGAGACCCAGGTTGGCATCCAGCTGCACCCTTGAC +
Preference number: 1 (lower is better)
Translates to: HAGNSQRQCRKGMHG*RCRRPRLASSCTLD
Trigger: GTCAAGGGTGCAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCCTTTTCTGCACTGCCTCTGGCTGTTTCCAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 90 bp GGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTaGCGGGTACACCTTCAGGGGGTCAGCATTCTACAGGGTAGCAGG +
Preference number: 1 (lower is better)
Translates to: GVLKVSQVLREAPLQ*RVHLQGVSILQGSR
Trigger: CCTGCTACCCTGTAGAATGCTGACCCCCTGAAGGTGTACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCTTAAGAACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 90 bp TTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTaGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTG +
Preference number: 1 (lower is better)
Translates to: LATSWDLTPLLTDGD*AAGPCCIVICCSDL
Trigger: CAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CCA 90 bp CTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATaGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTC +
Preference number: 1 (lower is better)
Translates to: LAFGHFLGPHAPVDR*RLGSRALLHCYLLF
Trigger: GAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CCA 90 bp CACTTCTGTCATCACCTGGTCACTTGTCTGTCTCCCACACTAGCCTaGGATCCCCATGGCTTCAGGAGCTGGGTCCAATTGCTCCCCATT +
Preference number: 1 (lower is better)
Translates to: HFCHHLVTCLSPTLA*DPHGFRSWVQLLPI
Trigger: AATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGGGATCCCAGGCTAGTGTGGGAGACAGACAAGTGACCAGGTGATGACAGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 90 bp ACCTTCAGGGGGTCAGCATTCTACAGGGTAGCAGGGCAGGAAGGATaGTTCAAGAAGAGCTCCCTGGCAGGCAGTGTGAAATGTGTAGCC +
Preference number: 1 (lower is better)
Translates to: TFRGSAFYRVAGQEG*FKKSSLAGSVKCVA
Trigger: GGCTACACATTTCACACTGCCTGCCAGGGAGCTCTTCTTGAACCATCCTTCCTGCCCTGCTACCCTGTAGAATGCTGACCCCCTGAAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR TCA 90 bp TCAGCTTTCAGGTCTTACCTGCTCCAGCAGGTGAGGACCCAACCTTaGCTGCCCCCAGCTAGGTTGAGTCCTCTGCCTCTTTCTTCACAA +
Preference number: 1 (lower is better)
Translates to: SAFRSYLLQQVRTQP*LPPARLSPLPLSSQ
Trigger: TTGTGAAGAAAGAGGCAGAGGACTCAACCTAGCTGGGGGCAGTCAAGGTTGGGTCCTCACCTGCTGGAGCAGGTAAGACCTGAAAGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR GCA 90 bp CTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTaGATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGG +
Preference number: 1 (lower is better)
Translates to: LTPLLTDGDWAAGPC*IVICCSDLVCLVQG
Trigger: CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 90 bp GGGGCCAGACCCTCCACCATCTGGCCTCTCTCCTCTCAAGCATGTTaGTCTAGAACAGAACTACAGAGTAGTGTCCTCATTGGGCCTTGT +
Preference number: 1 (lower is better)
Translates to: GARPSTIWPLSSQAC*SRTELQSSVLIGPC
Trigger: ACAAGGCCCAATGAGGACACTACTCTGTAGTTCTGTTCTAGAGCAACATGCTTGAGAGGAGAGAGGCCAGATGGTGGAGGGTCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR GCA 90 bp TCCTGGCACTTGGTCAGTACTTTCGGTGGAGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGC +
Preference number: 1 (lower is better)
Translates to: SWHLVSTFGGASVGF*SKECLLISNRSQWC
Trigger: GCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGTACTGACCAAGTGCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 90 bp ATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTaGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGT +
Preference number: 1 (lower is better)
Translates to: IGQQGLAALLSAVPT*FVLSKGDERARHQG
Trigger: ACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 90 bp GACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTaGTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAA +
Preference number: 1 (lower is better)
Translates to: DLTPLLTDGDWAAGP*CIVICCSDLVCLVQ
Trigger: TTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR TCA 90 bp TGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCAGGGTCTCATGGGATGAGGTACAGG +
Preference number: 1 (lower is better)
Translates to: CIVICCSDLVCLVQG*RKSQAPGSHGMRYR
Trigger: CCTGTACCTCATCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 90 bp TACCTTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGA +
Preference number: 1 (lower is better)
Translates to: YLSVERQWAFAPRSA*SFQTGANGASSSQR
Trigger: TCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
3UTR GCA 90 bp GTACTTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGA +
Preference number: 1 (lower is better)
Translates to: VLSVERQWAFAPRSA*SFQTGANGASSSQR
Trigger: TCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR TCA 90 bp AGGCAGTGTGAAATGTGTAGCCCACGTTCCCTTGGTCTTCCATTCTaGGGAATGGACCAGAGCTACACCAAGCCTAAACCCTGGACTTCA +
Preference number: 1 (lower is better)
Translates to: RQCEMCSPRSLGLPF*GMDQSYTKPKPWTS
Trigger: TGAAGTCCAGGGTTTAGGCTTGGTGTAGCTCTGGTCCATTCCTCAGAATGGAAGACCAAGGGAACGTGGGCTACACATTTCACACTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 90 bp CTCAAATCGAGCTCACCATGGTTCTGTGGTGGTGAGGGCAAGAAGTaGATGAACATGAAAGACAGGATGATGTCTTGGGTGTGGACTGAG +
Preference number: 1 (lower is better)
Translates to: LKSSSPWFCGGEGKK*MNMKDRMMSWVWTE
Trigger: CTCAGTCCACACCCAAGACATCATCCTGTCTTTCATGTTCATCCACTTCTTGCCCTCACCACCACAGAACCATGGTGAGCTCGATTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 90 bp TCTAGGAAAATCGGAAGTGAGTTGCCCCTCAAATCGAGCTCACCATaGTTCTGTGGTGGTGAGGGCAAGAAGTGGATGAACATGAAAGAC +
Preference number: 1 (lower is better)
Translates to: SRKIGSELPLKSSSP*FCGGEGKKWMNMKD
Trigger: GTCTTTCATGTTCATCCACTTCTTGCCCTCACCACCACAGAACCATGGTGAGCTCGATTTGAGGGGCAACTCACTTCCGATTTTCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CAA 90 bp ATGGCTGGAGGTGTCGGAGACCCAGGTTGGCATCCAGCTGCACCCTaGACTCGGGGCCCGGGGCCAGACCCTCCACCATCTGGCCTCTCT +
Preference number: 2 (lower is better)
Translates to: MAGGVGDPGWHPAAP*TRGPGPDPPPSGLS
Trigger: AGAGAGGCCAGATGGTGGAGGGTCTGGCCCCGGGCCCCGAGTCAAGGGTGCAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR GCA 90 bp GCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGAAGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: AVMVPAASGVGDLRAVGEEDRLC*SHMGTG
Trigger: CCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTC...TTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR CCA 90 bp TGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACTCTGCTGCTCTCACATaGGGACTGGGCCCAGATCCT +
Preference number: 2 (lower is better)
Translates to: WCPRLLVLGTSVPLGKTHSAALT*GLGPDP
Trigger: AGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGA...GTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR CAA 90 bp CCCACACTAGCCTGGGATCCCCATGGCTTCAGGAGCTGGGTCCAATaGCTCCCCATTGTGGGCCCAGAGCCTTGCACAGTGCTGGAGCAG +
Preference number: 2 (lower is better)
Translates to: PTLAWDPHGFRSWVQ*LPIVGPEPCTVLEQ
Trigger: CTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGGGATCCCAGGCTAGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR GCA 90 bp TGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACGGAGTGGCAGATAGTTaGCGTTCTCGTCGCACTTGG +
Preference number: 2 (lower is better)
Translates to: WCPRLLVLGTSVPLGKTHGVADS*RSRRTW
Trigger: CCAAGTGCGACGAGAACGGCAACTATCTGCCACTCC...GTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR CCA 90 bp GCTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTGGCACCAGGGTCTCATaGGATGAGGTACAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: AGGERTVSMSSLGSGCRVGTRVS*DEVQGG
Trigger: CCCACCCTGTACCTCATCCCATGAGACCCTGGTGCC...AACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 90 bp CCTGGGATCCCCATGGCTTCAGGAGCTGGGTCCAATTGCTCCCCATaGTGGGCCCAGAGCCTTGCACAGTGCTGGAGCAGGTGCATCACA +
Preference number: 2 (lower is better)
Translates to: PGIPMASGAGSNCSP*WAQSLAQCWSRCIT
Trigger: TGTGATGCACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGGGATCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR GCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSEDRLC*SHMGTG
Trigger: CCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTC...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCGCCCCTGTTGACAGATaGAGATTGGGCAGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSAPVDR*RLGSRA
Trigger: GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp TGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCCTCTTCCTGGCACTTaGTCAGTACTTTCGGTGGAG +
Preference number: 2 (lower is better)
Translates to: WCPRLLVLGTSVPLGKTHPLPGT*SVLSVE
Trigger: CTCCACCGAAAGTACTGACCAAGTGCCAGGAAGAGG...GTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CCA 90 bp TGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCCCATAGCACTGGAGTaGCAGATAGTTGCCGTTCTC +
Preference number: 2 (lower is better)
Translates to: WCPRLLVLGTSVPLGKTHPIALE*QIVAVL
Trigger: GAGAACGGCAACTATCTGCCACTCCAGTGCTATGGG...GTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR TCA 90 bp GCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: ADAPIALEWQIVAVLVALGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...AAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR CCA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCTGCTGCTCTCACATaGGGACTGGGCCCAGATCCT +
Preference number: 2 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLSAALT*GLGPDP
Trigger: AGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGA...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGTCTGCTGCTCTCACATaGGGACTGGGCCCAGATCCT +
Preference number: 2 (lower is better)
Translates to: FLGPHAPVDRWRLGSRALSAALT*GLGPDP
Trigger: AGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGA...CAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000518797.6
3UTR CAA 90 bp AAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTGCATGTaGAGGCTATGGGTGACCGTGGTTAGTGGGACAGGCAGTGAGCAG +
Preference number: 2 (lower is better)
Translates to: KGLSRRHSGFPLACM*RLWVTVVSGTGSEQ
Trigger: CTGCTCACTGCCTGTCCCACTAACCACGGTCACCCATAGCCTCAACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CAA 90 bp TGGAGGAAGGGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTaGGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTG +
Preference number: 2 (lower is better)
Translates to: WRKGASSQCIWGTCF*EGTVSPTLGIPSCL
Trigger: CAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR TCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCTGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSCLVQG*RKSQAP
Trigger: TGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACA...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR TCA 90 bp GTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTTGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: VWGWQDVEDRLCCSHMGTCLVQG*RKSQAP
Trigger: TGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACA...AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCGTGGGCCCAGAGCCTTaGACAGTGCTGGAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVVGPEP*TVLEQV
Trigger: CACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCAC...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR GCA 90 bp TGGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCGTTCAGCTACGAGACTaGAGCGTTGCGAGTCGAGTT +
Preference number: 2 (lower is better)
Translates to: WCWGPPCRWGRHTSSSRCVQLRD*SVASRV
Trigger: AACTCGACTCGCAACGCTGCAGTCTCGTAGCTGAAC...GCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CCA 90 bp GCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGAAAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 2 (lower is better)
Translates to: AVMVPAASGVGDLRAVGEKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...TTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR CCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCTTGACAGATGGAGATTaGGCAGCAGGGCCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSLTDGD*AAGPCC
Trigger: GCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAA...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp GACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATAGCAAATTGCTCCCCATTGTaGGCCCAGAGCCTTGCACAG +
Preference number: 2 (lower is better)
Translates to: DLRAVGEDTPAVADAPIANCSPL*AQSLAQ
Trigger: CTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATT...TGCTATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR TCA 90 bp GATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: DGDWAAGPCCIVICCSDLGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...CAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp CGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: RWSVSGLLLQGVPAHFKQEDRLC*SHMGTG
Trigger: CCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTC...CTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR GCA 90 bp CCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCGTTGAAGACCGCCTCTaGTGCTCTCACATGGGGACT +
Preference number: 2 (lower is better)
Translates to: PAQKTGPPVPVTHCSYGAVEDRL*CSHMGT
Trigger: AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC...GGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR GCA 90 bp GTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTACGAGACTGCAGCGTTaGGAGTCGAGTTCCAGATTC +
Preference number: 2 (lower is better)
Translates to: VWGWQDVEDRLCCSHMGTTRLQR*ESSSRF
Trigger: GAATCTGGAACTCGACTCGCAACGCTGCAGTCTCGT...AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CCA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 2 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp CCCTGGAGGTGCCTGGTGAACAGCTGTGGCAGGCACAGCAGGTCTAGGAAAATCAGACCCTCCACCATCTaGCCTCTCTCCTCTCAAGCA +
Preference number: 2 (lower is better)
Translates to: PWRCLVNSCGRHSRSRKIRPSTI*PLSSQA
Trigger: TGCTTGAGAGGAGAGAGGCCAGATGGTGGAGGGTCT...GATTTTCCTAGACCTGCTGTGCCTGCCACAGCTGTTCACCAGGCACCTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CAA 90 bp GTACGGGTAAGGGTAGTCCAGCTGTTCAGCTACGAGACTGCAGCGTaGCGAGTCGAGTTCCAGATTCCAGGCCAGCTCTACCAACAAGCC +
Preference number: 2 (lower is better)
Translates to: VRVRVVQLFSYETAA*RVEFQIPGQLYQQA
Trigger: GGCTTGTTGGTAGAGCTGGCCTGGAATCTGGAACTCGACTCGCAACGCTGCAGTCTCGTAGCTGAACAGCTGGACTACCCTTACCCGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR TCA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR TCA 90 bp GTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCTCGCTGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCA +
Preference number: 2 (lower is better)
Translates to: VQAPSASGAHVSWKGLSRCLVQG*RKSQAP
Trigger: TGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACA...GCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR TCA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGACCTCACGCCCCTGTTaGCAGATGGAGATTGGGCAG +
Preference number: 2 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGETSRPC*QMEIGQ
Trigger: CTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGT...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp TTCTTGGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTGCATGTTGCTCCAGCCTGGAAATaGAGAAGCCCACTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: FLEGTVSPTLGIPSCLHVAPAWK*RSPLPW
Trigger: CCAGGGAAGTGGGCTTCTGCATTTCCAGGCTGGAGC...AACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CCA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTCTGCTGTTCCGACTTaGTTTGTCTTGTCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRASAVPT*FVLSKG
Trigger: ACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGA...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCTTGACAGATGGAGATTaGGCAGCAGGGCCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLLTDGD*AAGPCC
Trigger: GCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAA...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTAGATCTGTCTAGCTTTTaGCCACTTCCTGGGACCTCA +
Preference number: 2 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLDLSSF*PLPGTS
Trigger: TGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATC...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp CCCTGGAGGTGCCTGGTGAACAGCTGTGGCAGGCACAGCAGGTCTAGGAAAATCCATGAGCCTAGGTCTTaGAGCCTTGTGTTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: PWRCLVNSCGRHSRSRKIHEPRS*SLVLEA
Trigger: AGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATG...GATTTTCCTAGACCTGCTGTGCCTGCCACAGCTGTTCACCAGGCACCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CAA 90 bp GGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: GSRALLHCYLLFRLG*SCPRVTKEPGTRVS
Trigger: TGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 90 bp TTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTT +
Preference number: 2 (lower is better)
Translates to: FGHFLGPHAPVDRWR*GSRALLHCYLLFRL
Trigger: AAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR TCA 90 bp CAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: QGVPAHFKQEPMVHPALKGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...TTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR GCA 90 bp CTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGTGGGCAGCAGGGCCTTaGTGCATTGTTATCTGCTGT +
Preference number: 2 (lower is better)
Translates to: LPISSMSLGLGALCWRLLWAAGP*CIVICC
Trigger: ACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCA...CAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCTGGGCAGCAGGGCCTTaGTGCATTGTTATCTGCTGT +
Preference number: 2 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLWAAGP*CIVICC
Trigger: ACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCA...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp GACTGCAGCGTTGCGAGTCGAGTTCCAGATTCCAGGCCAGCTCTACCAACAAGCGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCC +
Preference number: 2 (lower is better)
Translates to: DCSVASRVPDSRPALPTSAPRSA*SFQTGA
Trigger: GGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGC...GCTTGTTGGTAGAGCTGGCCTGGAATCTGGAACTCGACTCGCAACGCTGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CCA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGACTTTTGGCCACTTCCTaGGACCTCACGCCCCTGTTG +
Preference number: 2 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGLLATS*DLTPLL
Trigger: CAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAG...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 90 bp CAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTaGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGA +
Preference number: 2 (lower is better)
Translates to: QGLAALLSAVPTWFV*SKGDERARHQGLMG
Trigger: TCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 90 bp GGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCA +
Preference number: 2 (lower is better)
Translates to: GPHAPVDRWRLGSRA*LHCYLLFRLGLSCP
Trigger: TGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 90 bp GTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTT +
Preference number: 2 (lower is better)
Translates to: VPSHLVHEPRSWSLV*EAAVMSGTGICLAF
Trigger: AAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 90 bp TCTTTCTTCACAAAGCCCCCTGCACTTCTGTCATCACCTGGTCACTaGTCTGTCTCCCACACTAGCCTGGGATCCCCATGGCTTCAGGAG +
Preference number: 2 (lower is better)
Translates to: SFFTKPPALLSSPGH*SVSHTSLGSPWLQE
Trigger: CTCCTGAAGCCATGGGGATCCCAGGCTAGTGTGGGAGACAGACAAGTGACCAGGTGATGACAGAAGTGCAGGGGGCTTTGTGAAGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR TCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR TCA 90 bp CAGGCTCCCTGGAGGTGCCTGGTGAACAGCTGTGGCAGGCACAGCAGGTCTAGGTTTCACTGCAGTTCTTaGTTTCTGGCTCCTCTTAAA +
Preference number: 2 (lower is better)
Translates to: QAPWRCLVNSCGRHSRSRFHCSS*FLAPLK
Trigger: TTTAAGAGGAGCCAGAAATCAAGAACTGCAGTGAAA...CCTAGACCTGCTGTGCCTGCCACAGCTGTTCACCAGGCACCTCCAGGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR TCA 90 bp GCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCCTTGGTCTTCCATTCTaGGGAATGGACCAGAGCTAC +
Preference number: 2 (lower is better)
Translates to: AVADAPIALEWQIVAVLVLGLPF*GMDQSY
Trigger: GTAGCTCTGGTCCATTCCTCAGAATGGAAGACCAAG...GACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR GCA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTATCCCTTCTCCCTGTaGCTTCCCATCTCGTCCATG +
Preference number: 2 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVYPFSL*LPISSM
Trigger: CATGGACGAGATGGGAAGGCACAGGGAGAAGGGATA...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp AGCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTTATCCCTTCTCCCTGTaGCTTCCCATCTCGTCCATG +
Preference number: 2 (lower is better)
Translates to: SSSRCSHSTGVADSCRSRYPFSL*LPISSM
Trigger: CATGGACGAGATGGGAAGGCACAGGGAGAAGGGATA...ACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CCA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 2 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp TGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGCATGAGCCTAGGTCTTaGAGCCTTGTGTTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: WLSLQVNRLEKPRPKAGGHEPRS*SLVLEA
Trigger: AGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATG...CCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp AGACAAGAAATGGAAGGGGCTGAGAATCCTCGAGTTAGGCCTCGAGCTAGGGGCCAGAAAAGGAATGCATaGCTGGAGGTGTCGGAGACC +
Preference number: 2 (lower is better)
Translates to: RQEMEGAENPRVRPRARGQKRNA*LEVSET
Trigger: GGTCTCCGACACCTCCAGCCATGCATTCCTTTTCTG...GCCCCTAGCTCGAGGCCTAACTCGAGGATTCTCAGCCCCTTCCATTTCTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CCA 90 bp CCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGTCAAACAGGAGCCAATaGTGCATCCAGCTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: PPVPVTHCSYGARGFWCWSNRSQ*CIQLSK
Trigger: CTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGA...CCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CAA 90 bp AAGAGCTCCCTGGCAGGCAGTGTGAAATGTGTAGCCCACGTTCCCTaGGTCTTCCATTCTGAGGAATGGACCAGAGCTACACCAAGCCTA +
Preference number: 2 (lower is better)
Translates to: KSSLAGSVKCVAHVP*VFHSEEWTRATPSL
Trigger: TAGGCTTGGTGTAGCTCTGGTCCATTCCTCAGAATGGAAGACCAAGGGAACGTGGGCTACACATTTCACACTGCCTGCCAGGGAGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CAA 90 bp TTCCTGGCACTTGGTCAGTACTTTCGGTGGAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: FLALGQYFRWSVSGL*LQGVPAHFKQEPMV
Trigger: CACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGTACTGACCAAGTGCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR GCA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGATATCCCTTCTCCCTGTaGCTTCCCATCTCGTCCATG +
Preference number: 2 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGYPFSL*LPISSM
Trigger: CATGGACGAGATGGGAAGGCACAGGGAGAAGGGATA...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp TTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAAGTTGAAGACCGCCTCTaGTGCTCTCACATGGGGACT +
Preference number: 2 (lower is better)
Translates to: FRWSVSGLLLQGVPAHFKVEDRL*CSHMGT
Trigger: AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC...TTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CCA 90 bp TTCTTGGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTGCATGTTAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 2 (lower is better)
Translates to: FLEGTVSPTLGIPSCLHVKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...AACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CCA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCGATCTGTCTAGCTTTTaGCCACTTCCTGGGACCTCA +
Preference number: 2 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVDLSSF*PLPGTS
Trigger: TGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATC...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR TCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCACCTCACGCCCCTGTTaGCAGATGGAGATTGGGCAG +
Preference number: 2 (lower is better)
Translates to: LLSAVPTWFVLSKGDERATSRPC*QMEIGQ
Trigger: CTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGT...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTTGCTGCATTGTTATCTaGTGTTCCGACTTGGTTTGT +
Preference number: 2 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLCCIVI*CSDLVC
Trigger: ACAAACCAAGTCGGAACAGCAGATAACAATGCAGCA...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGCCTTGTGTTGGAGGCTaGTGTGATGTCAGGAACGGG +
Preference number: 2 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWPCVGG*CDVRNG
Trigger: CCCGTTCCTGACATCACAGCAGCCTCCAACACAAGG...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCCTTTTGGCCACTTCCTaGGACCTCACGCCCCTGTTG +
Preference number: 2 (lower is better)
Translates to: LLSAVPTWFVLSKGDERALLATS*DLTPLL
Trigger: CAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAG...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGATCTGTCTAGCTTTTaGCCACTTCCTGGGACCTCA +
Preference number: 2 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGDLSSF*PLPGTS
Trigger: TGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATC...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGCATGAGCCTAGGTCTTaGAGCCTTGTGTTGGAGGCT +
Preference number: 2 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKHEPRS*SLVLEA
Trigger: AGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATG...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp CAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAAGCCTTGCACAGTGCTaGAGCAGGTGCATCACATGG +
Preference number: 2 (lower is better)
Translates to: QGVPAHFKQEPMVHPALKSLAQC*SRCITW
Trigger: CCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCT...TTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR GCA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGGCAGCAGGGCCTTGCTaGATTGTTATCTGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWAAGPC*IVICCS
Trigger: GGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGC...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTCTGCTGTTCCGACTTaGTTTGTCTTGTCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVSAVPT*FVLSKG
Trigger: ACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGA...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGATCTGTCTAGCTTTTaGCCACTTCCTGGGACCTCA +
Preference number: 2 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKDLSSF*PLPGTS
Trigger: TGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATC...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGATGCTGCATTGTTATCTaGTGTTCCGACTTGGTTTGT +
Preference number: 2 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGCCIVI*CSDLVC
Trigger: ACAAACCAAGTCGGAACAGCAGATAACAATGCAGCA...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR GCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAACAGGAGCCAATGGTaGATCCAGCTCTCAAAGACC +
Preference number: 2 (lower is better)
Translates to: LLSAVPTWFVLSKGDERANRSQW*IQLSKT
Trigger: GGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTT...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CAA 90 bp CTCAAGCATGTTGCTCTAGAACAGAACTACAGAGTAGTGTCCTCATaGGGCCTTGTTGACCCACAGCAAGACTTTAAACTTAAAAATGGG +
Preference number: 2 (lower is better)
Translates to: LKHVALEQNYRVVSS*GLVDPQQDFKLKNG
Trigger: CCCATTTTTAAGTTTAAAGTCTTGCTGTGGGTCAACAAGGCCCAATGAGGACACTACTCTGTAGTTCTGTTCTAGAGCAACATGCTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 72 bp AAGGAATGCATGGCTGGAGGTGTCGGAGACCCAGGTTaGCATCCAGCTGCACCCTTGACTCGGGGCCCGGGG +
Preference number: 3 (lower is better)
Translates to: KECMAGGVGDPG*HPAAPLTRGPG
Trigger: CCCCGGGCCCCGAGTCAAGGGTGCAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 72 bp GCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTaGGGAAGACACACCAGCAGTAGCCGATGCTCCCAT +
Preference number: 3 (lower is better)
Translates to: ARGFWCWGPPCR*GRHTSSSRCSH
Trigger: ATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR GCA 72 bp TATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTaGCGTTGGGGAAGACACACCAGCAGTAGCCGATGC +
Preference number: 3 (lower is better)
Translates to: YGARGFWCWGPP*RWGRHTSSSRC
Trigger: GCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR GCA 72 bp GGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTaGCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCG +
Preference number: 3 (lower is better)
Translates to: GSSSSSDSLQLW*PRLLVLGTSVP
Trigger: CGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR CAA 90 bp GCTGCTCCAGCCTGGAAATGCAGAAGCCCACTTCCCTGGGCCCAGAGCCATGTGGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: AAPAWKCRSPLPWAQSHVGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...CACATGGCTCTGGGCCCAGGGAAGTGGGCTTCTGCATTTCCAGGCTGGAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CAA 90 bp CTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGTTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTG +
Preference number: 3 (lower is better)
Translates to: LQLWCPRLLVLGTSVPLGLGSRA*LHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAA...CCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CAA 90 bp GGAGACCCAGGTTGGCATCCAGCTGCACCCTTGACTCGGGGCCCGGGGCCAGACCCTCATTGGGCCTTGTaGACCCACAGCAAGACTTTA +
Preference number: 3 (lower is better)
Translates to: GDPGWHPAAPLTRGPGPDPHWAL*THSKTL
Trigger: TAAAGTCTTGCTGTGGGTCAACAAGGCCCAATGAGG...GTCTGGCCCCGGGCCCCGAGTCAAGGGTGCAGCTGGATGCCAACCTGGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR GCA 72 bp GTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGGCCCAGATCCTGCTTG +
Preference number: 3 (lower is better)
Translates to: VWGWQDVEDRLC*SHMGTGPRSCL
Trigger: CAAGCAGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
3UTR GCA 72 bp CCTGGGATCCCCATGGCTTCAGGAGCTGGGTCCAATTaGTCCCCATTGTGGGCCCAGAGCCTTGCACAGTGC +
Preference number: 3 (lower is better)
Translates to: PGIPMASGAGSN*SPLWAQSLAQC
Trigger: GCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGGGATCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 72 bp CCCACACTAGCCTGGGATCCCCATGGCTTCAGGAGCTaGGTCCAATTGCTCCCCATTGTGGGCCCAGAGCCT +
Preference number: 3 (lower is better)
Translates to: PTLAWDPHGFRS*VQLLPIVGPEP
Trigger: AGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGGGATCCCAGGCTAGTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 72 bp CCGTTCTCGTCGCACTTGGGCCTGAATGAACCCGGGTaGACAGCAGGGATGTGGCTGACCTCTTCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: PFSSHLGLNEPG*TAGMWLTSSWH
Trigger: GTGCCAGGAAGAGGTCAGCCACATCCCTGCTGTCCACCCGGGTTCATTCAGGCCCAAGTGCGACGAGAACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR CCA 72 bp ACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTaGGGACCTCCGTGCCGTTGGGGAAGACACACCAGC +
Preference number: 3 (lower is better)
Translates to: THCSYGARGFWC*GPPCRWGRHTS
Trigger: GCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR CCA 72 bp CCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTaGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACAC +
Preference number: 3 (lower is better)
Translates to: PVTHCSYGARGF*CWGPPCRWGRH
Trigger: GTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR CAA 90 bp CCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGATGAGGTACAGGGTGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: PRVTKEPGTRVSWDEVQGGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...ACCCTGTACCTCATCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp GGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCCCTTGTGGGCCCAGAGCCTaGCACAGTGCTGGAGCAGGT +
Preference number: 3 (lower is better)
Translates to: GQSACPAWGLGVGLSLLPCGPRA*HSAGAG
Trigger: ACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACA...AGGGAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CAA 90 bp CCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCCGTTCTCGTCGCACTaGGGCCTGAATGAACCCGGG +
Preference number: 3 (lower is better)
Translates to: PAQKTGPPVPVTHCSYGAPFSSH*GLNEPG
Trigger: CCCGGGTTCATTCAGGCCCAAGTGCGACGAGAACGG...GGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR CCA 72 bp CTGGGGGCTGAAGGGAGCAAGAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGC +
Preference number: 3 (lower is better)
Translates to: LGAEGSKKAVAV*GWQDVEDRLCC
Trigger: GCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACACAGCTACAGCTTTCTTGCTCCCTTCAGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CCA 72 bp ATGGCTTCAGGAGCTGGGTCCAATTGCTCCCCATTGTaGGCCCAGAGCCTTGCACAGTGCTGGAGCAGGTGC +
Preference number: 3 (lower is better)
Translates to: MASGAGSNCSPL*AQSLAQCWSRC
Trigger: GCACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 72 bp CCCGGGTGGACAGCAGGGATGTGGCTGACCTCTTCCTaGCACTTGGTCAGTACTTTCGGTGGAGCGTCAGTG +
Preference number: 3 (lower is better)
Translates to: PGWTAGMWLTSS*HLVSTFGGASV
Trigger: CACTGACGCTCCACCGAAAGTACTGACCAAGTGCCAGGAAGAGGTCAGCCACATCCCTGCTGTCCACCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CAA 90 bp GCTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTTTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTG +
Preference number: 3 (lower is better)
Translates to: AGGERTVSMSSLGSGCRVLGSRA*LHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAA...AACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTAGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLVDRWR*GSRALL
Trigger: CAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAAC...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 72 bp GGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTaGATGTTGAGGCTATGGGTGACCGTGGTTAGTGGG +
Preference number: 3 (lower is better)
Translates to: GLSRRHSGFPLA*MLRLWVTVVSG
Trigger: CCCACTAACCACGGTCACCCATAGCCTCAACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR GCA 72 bp TGGGTCCAATTGCTCCCCATTGTGGGCCCAGAGCCTTaGACAGTGCTGGAGCAGGTGCATCACATGGTCCTC +
Preference number: 3 (lower is better)
Translates to: WVQLLPIVGPEP*TVLEQVHHMVL
Trigger: GAGGACCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR GCA 72 bp CCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATaGTCCCATAGCACTGGAGTGGCAGATAGTTGCCGT +
Preference number: 3 (lower is better)
Translates to: PCRWGRHTSSSR*SHSTGVADSCR
Trigger: ACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR CAA 90 bp CTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: LGLSCPRVTKEPGTRVSWGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...CCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp AGCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: SSSRCSHSTGVADSCRSRGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...ACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
3UTR-3UTR CAA 90 bp ATTCCAGGCCAGCTCTACCAACAAGCCCCAGTGTCCTCCCTGTGGATGGCTGCTGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: IPGQLYQQAPVSSLWMAAVDRWR*GSRALL
Trigger: CAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAAC...AGCAGCCATCCACAGGGAGGACACTGGGGCTTGTTGGTAGAGCTGGCCTGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CAA 90 bp GCTGCTCCAGCCTGGAAATGCAGAAGCCCACTTCCCTGGGCCCAGAGCCATGTGTCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: AAPAWKCRSPLPWAQSHVSWSLV*EAAVMS
Trigger: TGACATCACAGCAGCCTCCAACACAAGGCTCCAAGA...CACATGGCTCTGGGCCCAGGGAAGTGGGCTTCTGCATTTCCAGGCTGGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CAA 90 bp CCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: PVDRWRLGSRALLHCYLLGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp CAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCAGATCCCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACG +
Preference number: 3 (lower is better)
Translates to: QDVEDRLCCSHMGTGPRSLFRLG*SCPRVT
Trigger: CGTCACCCTTGGACAAGACAAACCAAGTCGGAACAG...GGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCAGGGCCTTGCTGCATaGTTATCTGCTGTTCCGACT +
Preference number: 3 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSQGLAA*LSAVPT
Trigger: AGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTG +
Preference number: 3 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLEVDRWR*GSRALL
Trigger: CAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAAC...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp GCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCTCCAATTGCTCCCCATaGTGGGCCCAGAGCCTTGCA +
Preference number: 3 (lower is better)
Translates to: AVADAPIALEWQIVAVLVSNCSP*WAQSLA
Trigger: TGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGA...GACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CAA 90 bp TCGAGTTCCAGATTCCAGGCCAGCTCTACCAACAAGCCCCAGTGTCCTCCCTGTCTGCCCCCAGCTAGGTaGAGTCCTCTGCCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: SSSRFQASSTNKPQCPPCLPPAR*SPLPLS
Trigger: AGAAAGAGGCAGAGGACTCAACCTAGCTGGGGGCAG...ACAGGGAGGACACTGGGGCTTGTTGGTAGAGCTGGCCTGGAATCTGGAACTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 72 bp GGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATaGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTAT +
Preference number: 3 (lower is better)
Translates to: GHFLGPHAPVDR*RLGSRALLHCY
Trigger: ATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CCA 72 bp AACAGCCAGAGGCAGTGCAGAAAAGGAATGCATGGCTaGAGGTGTCGGAGACCCAGGTTGGCATCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: NSQRQCRKGMHG*RCRRPRLASSC
Trigger: GCAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCCTTTTCTGCACTGCCTCTGGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 72 bp CACTCGGGATTCCCTCTTGCCTGCATGTTGAGGCTATaGGTGACCGTGGTTAGTGGGACAGGCAGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: HSGFPLACMLRL*VTVVSGTGSEQ
Trigger: CTGCTCACTGCCTGTCCCACTAACCACGGTCACCCATAGCCTCAACATGCAGGCAAGAGGGAATCCCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 72 bp GTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTaGAAGGGACTGTCTCGCCGACACTCGGGATTCCCT +
Preference number: 3 (lower is better)
Translates to: VQAPSASGAHVS*KGLSRRHSGFP
Trigger: AGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CAA 90 bp CCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGAACGGGGATCTTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTG +
Preference number: 3 (lower is better)
Translates to: PRSWSLVLEAAVMSGTGILGSRA*LHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAA...GATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 72 bp ACGGGTAAGGGTAGTCCAGCTGTTCAGCTACGAGACTaGAGCGTTGCGAGTCGAGTTCCAGATTCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: TGKGSPAVQLRD*SVASRVPDSRP
Trigger: TGGCCTGGAATCTGGAACTCGACTCGCAACGCTGCAGTCTCGTAGCTGAACAGCTGGACTACCCTTACCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 72 bp TCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTaGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGT +
Preference number: 3 (lower is better)
Translates to: SWDLTPLLTDGD*AAGPCCIVICC
Trigger: ACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CCA 72 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTaGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGA +
Preference number: 3 (lower is better)
Translates to: PVPSHLVHEPRS*SLVLEAAVMSG
Trigger: TCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CCA 72 bp AAGACTTGGAGGAAGGGTGCAAGCTCCCAGTGCATCTaGGGCACATGTTTCTTGGAAGGGACTGTCTCGCCG +
Preference number: 3 (lower is better)
Translates to: KTWRKGASSQCI*GTCFLEGTVSP
Trigger: CGGCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTTCCTCCAAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CCA 72 bp AGCTCTACCAACAAGCCCCAGTGTCCTCCCTGTGGATaGCTGCTCAGCTTTCAGGTCTTACCTGCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: SSTNKPQCPPCG*LLSFQVLPAPA
Trigger: TGCTGGAGCAGGTAAGACCTGAAAGCTGAGCAGCCATCCACAGGGAGGACACTGGGGCTTGTTGGTAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CAA 90 bp GTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCTCGCCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACG +
Preference number: 3 (lower is better)
Translates to: VQAPSASGAHVSWKGLSRLFRLG*SCPRVT
Trigger: CGTCACCCTTGGACAAGACAAACCAAGTCGGAACAG...GCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CAA 90 bp CCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGAACGGGGATCCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACG +
Preference number: 3 (lower is better)
Translates to: PRSWSLVLEAAVMSGTGILFRLG*SCPRVT
Trigger: CGTCACCCTTGGACAAGACAAACCAAGTCGGAACAG...GATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp TGCCCCTCAAATCGAGCTCACCATGGTTCTGTGGTGGTGAGGGCAAGAAGTGGATTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTG +
Preference number: 3 (lower is better)
Translates to: CPSNRAHHGSVVVRARSGLGSRA*LHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAA...TCCACTTCTTGCCCTCACCACCACAGAACCATGGTGAGCTCGATTTGAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CAA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGACCTCACGCCCCTGTaGACAGATGGAGATTGGGCA +
Preference number: 3 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGDLTPL*TDGDWA
Trigger: TGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTC...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 72 bp GTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCCAATGGTGCATCCAGC +
Preference number: 3 (lower is better)
Translates to: VERQWAFAPRSA*SFQTGANGASS
Trigger: GCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
3UTR GCA 72 bp CTCCCTGTACCTTTCGGTGGAGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGC +
Preference number: 3 (lower is better)
Translates to: LPVPFGGASVGF*SKECLLISNRS
Trigger: GCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
3UTR-3UTR CAA 90 bp AAGGGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCCAGGGCCTTGCTGCATaGTTATCTGCTGTTCCGACT +
Preference number: 3 (lower is better)
Translates to: KGASSQCIWGTCFLEGTVQGLAA*LSAVPT
Trigger: AGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG...GACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CAA 90 bp AGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGAGGCAGGGCCTTGCTGCATaGTTATCTGCTGTTCCGACT +
Preference number: 3 (lower is better)
Translates to: SLQVNRLEKPRPKAGGERQGLAA*LSAVPT
Trigger: AGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG...CCTCTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp AGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGAGGTCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: SLQVNRLEKPRPKAGGERSWSLV*EAAVMS
Trigger: TGACATCACAGCAGCCTCCAACACAAGGCTCCAAGA...CCTCTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR TCA 72 bp ATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCAGGGTCTCATGGGATG +
Preference number: 3 (lower is better)
Translates to: ICCSDLVCLVQG*RKSQAPGSHGM
Trigger: CATCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CCA 72 bp CCTGGCACTTGGTCAGTACTTTCGGTGGAGCGTCAGTaGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAA +
Preference number: 3 (lower is better)
Translates to: PGTWSVLSVERQ*AFAPRSACSFQ
Trigger: TTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGTACTGACCAAGTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CAA 90 bp TGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGCCGACTTGGTTTGTCTaGTCCAAGGGTGACGAAAGA +
Preference number: 3 (lower is better)
Translates to: WLSLQVNRLEKPRPKAGGPTWFV*SKGDER
Trigger: TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGG...CCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACG +
Preference number: 3 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDLFRLG*SCPRVT
Trigger: CGTCACCCTTGGACAAGACAAACCAAGTCGGAACAG...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 72 bp CCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTaGTGCATTGTTATCTGCTGTTCCGACTTGGTTTGT +
Preference number: 3 (lower is better)
Translates to: PLLTDGDWAAGP*CIVICCSDLVC
Trigger: ACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 72 bp GGGTCCTGGAGATGGTCTCCAGAGCTTTTAGCCTCATaGTGGAAACAGCCAGAGGCAGTGCAGAAAAGGAAT +
Preference number: 3 (lower is better)
Translates to: GSWRWSPELLAS*WKQPEAVQKRN
Trigger: ATTCCTTTTCTGCACTGCCTCTGGCTGTTTCCAGCATGAGGCTAAAAGCTCTGGAGACCATCTCCAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR GCA 72 bp TTGGTCAGTACTTTCGGTGGAGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGC +
Preference number: 3 (lower is better)
Translates to: LVSTFGGASVGF*SKECLLISNRS
Trigger: GCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGTACTGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CCA 72 bp CAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTaGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGG +
Preference number: 3 (lower is better)
Translates to: QGLAALLSAVPT*FVLSKGDERAR
Trigger: CCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CCA 72 bp ATCGGAAGTGAGTTGCCCCTCAAATCGAGCTCACCATaGTTCTGTGGTGGTGAGGGCAAGAAGTGGATGAAC +
Preference number: 3 (lower is better)
Translates to: IGSELPLKSSSP*FCGGEGKKWMN
Trigger: GTTCATCCACTTCTTGCCCTCACCACCACAGAACCATGGTGAGCTCGATTTGAGGGGCAACTCACTTCCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR-3UTR CAA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCT +
Preference number: 3 (lower is better)
Translates to: LLSAVPTWFVLSKGDERASVSGL*LQGVPA
Trigger: AGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCT...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR-3UTR CAA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGTCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWSWSLV*EAAVMS
Trigger: TGACATCACAGCAGCCTCCAACACAAGGCTCCAAGA...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 72 bp CTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTaGATTGTTATCTGCTGTTCCGACTTGGTTTGTCTT +
Preference number: 3 (lower is better)
Translates to: LLTDGDWAAGPC*IVICCSDLVCL
Trigger: AAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR GCA 72 bp CCCTCCACCATCTGGCCTCTCTCCTCTCAAGCATGTTaGTCTAGAACAGAACTACAGAGTAGTGTCCTCATT +
Preference number: 3 (lower is better)
Translates to: PSTIWPLSSQAC*SRTELQSSVLI
Trigger: AATGAGGACACTACTCTGTAGTTCTGTTCTAGAGCAACATGCTTGAGAGGAGAGAGGCCAGATGGTGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR GCA 72 bp AAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTaGATCCAGCTCTCAAAGACCTTCCAGTCTATGGTC +
Preference number: 3 (lower is better)
Translates to: KECLLISNRSQW*IQLSKTFQSMV
Trigger: GACCATAGACTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
3UTR-3UTR CAA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCCCGACTTGGTTTGTCTaGTCCAAGGGTGACGAAAGA +
Preference number: 3 (lower is better)
Translates to: LLSAVPTWFVLSKGDERAPTWFV*SKGDER
Trigger: TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGG...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR-3UTR CAA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCTATGGGTGGAAAACATaGGCTCTTCCTTGGGGAGTG +
Preference number: 3 (lower is better)
Translates to: LLSAVPTWFVLSKGDERAYGWKT*ALPWGV
Trigger: CACTCCCCAAGGAAGAGCCAATGTTTTCCACCCATA...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR TCA 72 bp TCTGTGGGTTACTTGGGCTGCGTTCTCCCACCTCAGTaGCTGGATTTAGCGTCTTTAGTTACCTCTTTAGGA +
Preference number: 3 (lower is better)
Translates to: SVGYLGCVLPPQ*LDLASLVTSLG
Trigger: TCCTAAAGAGGTAACTAAAGACGCTAAATCCAGTCACTGAGGTGGGAGAACGCAGCCCAAGTAACCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR GCA 72 bp GATGGAACTAAAGGATGGTCATGGTTGATTTCCTGTTaGCAGAGTAAGTCATGTAAATACCCAAAGACAAGA +
Preference number: 3 (lower is better)
Translates to: DGTKGWSWLISC*QSKSCKYPKTR
Trigger: TCTTGTCTTTGGGTATTTACATGACTTACTCTGGCAACAGGAAATCAACCATGACCATCCTTTAGTTCCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp CTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGCTCCGCGGCTGCACTTaGTCTCCGGGGCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LQLWCPRLLVLGTSVPLGLRGCT*SPGPQG
Trigger: GCCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAG...CCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR GCA 90 bp GGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCACAGGGCTCCGCGGCTaGACTTGCTCTCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GWQDVEDRLCCSHMGTGPTGLRG*TCSPGP
Trigger: GGGCCCCGGAGAGCAAGTGCAGCCGCGGAGCCCTGT...GGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000523208.6
CDS-3UTR CCA 90 bp CTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGTTCTGCATGGGCCCCTaGGGCAGGGCTCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: LQLWCPRLLVLGTSVPLGFCMGP*GRAPMG
Trigger: GCCCATGGGAGCCCTGCCCCAGGGGCCCATGCAGAA...CCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp GGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCTTCTGCATGGGCCCCTaGGGCAGGGCTCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: GWQDVEDRLCCSHMGTGPFCMGP*GRAPMG
Trigger: GCCCATGGGAGCCCTGCCCCAGGGGCCCATGCAGAA...GGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000523208.6
CDS-3UTR TCA 90 bp CTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LQLWCPRLLVLGTSVPLGGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...CCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR TCA 90 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGATCCAGCTGCACCCTTaGCTCGGGGCCCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: FLGPHAPVDRWRLGSRALIQLHP*LGARGQ
Trigger: CTGGCCCCGGGCCCCGAGTCAAGGGTGCAGCTGGAT...CAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp CCCTGGAGGTGCCTGGTGAACAGCTGTGGCAGGCACAGCAGGTCTAGGAAAATCCTCCGCGGCTGCACTTaGTCTCCGGGGCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PWRCLVNSCGRHSRSRKILRGCT*SPGPQG
Trigger: GCCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAG...GATTTTCCTAGACCTGCTGTGCCTGCCACAGCTGTTCACCAGGCACCTCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCCGCGGCTGCACTTaGTCTCCGGGGCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLLRGCT*SPGPQG
Trigger: GCCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAG...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCACAGGGCTCCGCGGCTaGACTTGCTCTCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSTGLRG*TCSPGP
Trigger: GGGCCCCGGAGAGCAAGTGCAGCCGCGGAGCCCTGT...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGACAGGGCTCCGCGGCTaGACTTGCTCTCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FLGPHAPVDRWRLGSRALTGLRG*TCSPGP
Trigger: GGGCCCCGGAGAGCAAGTGCAGCCGCGGAGCCCTGT...CAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCTGGTGGCATTCTGCATaGGCCCCTGGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GAGRMLKTASAALTWGLGWWHSA*APGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCA...GCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000523208.6
CDS-3UTR GCA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCCCATGGGCAGCGCCTaGATCAGCAGCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLPMGSA*ISSGVA
Trigger: GGCCACCCCGCTGCTGATGCAGGCGCTGCCCATGGG...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp GCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCTCCCATGGGCAGCGCCTaGATCAGCAGCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: APIALEWQIVAVLVALGPPMGSA*ISSGVA
Trigger: GGCCACCCCGCTGCTGATGCAGGCGCTGCCCATGGG...AGGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp GTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCGGAAGTAGGCGGTGGTaGCCTGGCCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VTHCSYGARGFWCWGPPCGSRRW*PGQRGA
Trigger: TGCTCCTCGCTGGCCAGGCCACCACCGCCTACTTCC...GCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGGGGGCAGGGCTCCCATaGGCAGCGCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: FLGPHAPVDRWRLGSRALGAGLP*AAPASA
Trigger: TGCTGATGCAGGCGCTGCCCATGGGAGCCCTGCCCC...CAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCAGATCCGGGGCAGGGCTCCCATaGGCAGCGCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: QDVEDRLCCSHMGTGPRSGAGLP*AAPASA
Trigger: TGCTGATGCAGGCGCTGCCCATGGGAGCCCTGCCCC...GGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000523208.6
CDS-3UTR CCA 90 bp TGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCGCGGCTTCTGGTGTTaGGGACCTCCGTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: CWGPPCRWGRHTSSSRCSRGFWC*GPPCRW
Trigger: CCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCG...GGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTAGGTGCCCGCGGCTTCTaGTGTTGGGGACCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLGARGF*CWGPPC
Trigger: GCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACC...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
3UTR CAA 72 bp AAAGGAATGCATGGCTGGAGGTGTCGGAGACCCAGGTaGGCATCCAGCTGCACCCTTGACTCGGGGCCCGGG +
Preference number: 4 (lower is better)
Translates to: KGMHGWRCRRPR*ASSCTLDSGPG
Trigger: CCCGGGCCCCGAGTCAAGGGTGCAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR TCA 90 bp GCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTGGAGGTGCCTGGTaGACAGCTGTGGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: ATSWDLTPLLTDGDWAAGPGGAW*TAVAGT
Trigger: TGTGCCTGCCACAGCTGTTCACCAGGCACCTCCAGG...CCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp CTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGCAGCGGGGTGGCCATaGGCATCTTGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: LTAVMVPAASGVGDLRAVAAGWP*ASCSQA
Trigger: AGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGC...AACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR GCA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGCCCATGGGCAGCGCCTaGATCAGCAGCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLEPMGSA*ISSGVA
Trigger: GGCCACCCCGCTGCTGATGCAGGCGCTGCCCATGGG...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp TGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCGGCGCCGGCCCAGCATaGGCAGTTGCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: CWGPPCRWGRHTSSSRCSGAGPA*AVAHCW
Trigger: CCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCC...GGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp TGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATGGCGCCGGCCCAGCATaGGCAGTTGCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: WGPPCRWGRHTSSSRCSHGAGPA*AVAHCW
Trigger: CCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCC...ATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp GGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCGCATCAGCAGCGGGGTaGCCATGCGCATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GWQDVEDRLCCSHMGTGPASAAG*PCASCS
Trigger: TGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGC...GGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000523208.6
CDS-3UTR CCA 90 bp CCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGATGAGGTACAGGGTTTCTGCATGGGCCCCTaGGGCAGGGCTCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: PRVTKEPGTRVSWDEVQGFCMGP*GRAPMG
Trigger: GCCCATGGGAGCCCTGCCCCAGGGGCCCATGCAGAA...ACCCTGTACCTCATCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CTGTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGATGGTGGCATTCTGCATaGGCCCCTGGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LCGAGRMLKTASAALTWGWWHSA*APGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCA...TCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000523208.6
CDS-3UTR CCA 90 bp CTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGCTCTCACATGGGGACTaGGCCCAGATCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LQLWCPRLLVLGTSVPLGLSHGD*AQILLG
Trigger: ACCAAGCAGGATCTGGGCCCAGTCCCCATGTGAGAG...CCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR TCA 90 bp GGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCCGCGCTGGTCATCCATaGCTGGCTTCTGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: GWQDVEDRLCCSHMGTGPRAGHP*LASDLP
Trigger: GGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCG...GGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR TCA 90 bp GTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCAGCAGGGATGTGGCTaGCCTCTTCCTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VTHCSYGARGFWCWGPPCQQGCG*PLPGTW
Trigger: CCAAGTGCCAGGAAGAGGTCAGCCACATCCCTGCTG...GCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp AAGGGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCCCCATGGGCAGCGCCTaGATCAGCAGCGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KGASSQCIWGTCFLEGTVPMGSA*ISSGVA
Trigger: GGCCACCCCGCTGCTGATGCAGGCGCTGCCCATGGG...GACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp CTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTTACTTGGTGGCATTCTaGATGGGCCCCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LTAVMVPAASGVGDLRAVYLVAF*MGPWGR
Trigger: CCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTA...AACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR GCA 90 bp GCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGTGTTGGGGACCTCCGTaGCGTTGGGGAAGACACACC +
Preference number: 4 (lower is better)
Translates to: ATSWDLTPLLTDGDWAAGCWGPP*RWGRHT
Trigger: GGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACA...CCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR GCA 90 bp ACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTACTGGGCCCAGATCCTaGTTGGTCACACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: THCSYGARGFWCWGPPCRTGPRS*LVTPSP
Trigger: TGGGCTGGGTGTGACCAAGCAGGATCTGGGCCCAGT...ACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp TGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACGTTGAAGACCGCCTCTaGTGCTCTCACATGGGGACT +
Preference number: 4 (lower is better)
Translates to: WCPRLLVLGTSVPLGKTHVEDRL*CSHMGT
Trigger: AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC...GTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp GGAGACCCAGGTTGGCATCCAGCTGCACCCTTGACTCGGGGCCCGGGGCCAGACCTGGTCATCCATGACTaGCTTCTGATCTTCCCGACA +
Preference number: 4 (lower is better)
Translates to: GDPGWHPAAPLTRGPGPDLVIHD*LLIFPT
Trigger: TGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAG...GTCTGGCCCCGGGCCCCGAGTCAAGGGTGCAGCTGGATGCCAACCTGGGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp TGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATGGACCTCCGTGCCGTTaGGGAAGACACACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: WGPPCRWGRHTSSSRCSHGPPCR*GRHTSS
Trigger: ACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCC...ATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp TCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGTGCCCGCGGCTTCTaGTGTTGGGGACCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SSSSSDSLQLWCPRLLVLGARGF*CWGPPC
Trigger: GCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACC...CAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp TGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATGGCCCAGATCCTGCTTaGTCACACCCAGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: WGPPCRWGRHTSSSRCSHGPDPA*SHPAQK
Trigger: CTTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCC...ATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCGGCACCAGGGTCTCATaGGATGAGGTACAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAGTRVS*DEVQGG
Trigger: CCCACCCTGTACCTCATCCCATGAGACCCTGGTGCC...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 72 bp CCCATGGCTTCAGGAGCTGGGTCCAATTGCTCCCCATaGTGGGCCCAGAGCCTTGCACAGTGCTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PMASGAGSNCSP*WAQSLAQCWSR
Trigger: CCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CAA 72 bp GCCTGGGATCCCCATGGCTTCAGGAGCTGGGTCCAATaGCTCCCCATTGTGGGCCCAGAGCCTTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: AWDPHGFRSWVQ*LPIVGPEPCTV
Trigger: CACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCATGGGGATCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CAA 72 bp GACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTaGGGGACCTCCGTGCCGTTGGGGAAGACACACCAG +
Preference number: 4 (lower is better)
Translates to: DSLQLWCPRLLV*GTSVPLGKTHQ
Trigger: CTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR TCA 90 bp GTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTCAGCAGGGATGTGGCTaGCCTCTTCCTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VWGWQDVEDRLCCSHMGTQQGCG*PLPGTW
Trigger: CCAAGTGCCAGGAAGAGGTCAGCCACATCCCTGCTG...AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR TCA 90 bp GCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCTGCACTTGGGCCTGAATaGACCCGGGTGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: APIALEWQIVAVLVALGPALGPE*TRVDSR
Trigger: CCTGCTGTCCACCCGGGTTCATTCAGGCCCAAGTGC...AGGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR TCA 90 bp CCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGTCGCACTTGGGCCTaGATGAACCCGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: PAQKTGPPVPVTHCSYGARRTWA*MNPGGQ
Trigger: CTGTCCACCCGGGTTCATTCAGGCCCAAGTGCGACG...GGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR TCA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCACCTCACGCCCCTGTTaGCAGATGGAGATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRATSRPC*QMEIGQ
Trigger: CTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGT...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp CTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCACAGGGCTCCGCGGCTaGACTTGCTCTCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LQGVPAHFKQEPMVHPALTGLRG*TCSPGP
Trigger: GGGCCCCGGAGAGCAAGTGCAGCCGCGGAGCCCTGT...GAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR GCA 90 bp GGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCGGAGTGGCAGATAGTTaGCGTTCTCGTCGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GAGRMLKTASAALTWGLGGVADS*RSRRTW
Trigger: CCAAGTGCGACGAGAACGGCAACTATCTGCCACTCC...GCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp GGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCTCACTGCAGTTATGGTaGCCGCGGCTTCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GAGRMLKTASAALTWGLGSLQLW*PRLLVL
Trigger: CAACACCAGAAGCCGCGGGCACCATAACTGCAGTGA...GCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp GGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCGTTGAAGACCGCCTCTaGTGCTCTCACATGGGGACT +
Preference number: 4 (lower is better)
Translates to: GWQDVEDRLCCSHMGTGPVEDRL*CSHMGT
Trigger: AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC...GGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGTGGTGGCATTCTGCATaGGCCCCTGGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGWWHSA*APGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCA...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGCGCGGCTTCTGGTGTTaGGGACCTCCGTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LPISSMSLGLGALCWRLLRGFWC*GPPCRW
Trigger: CCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCG...CAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CCA 90 bp ATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCGCGGCTTCTGGTGTTaGGGACCTCCGTGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: MSGTGICLAFGHFLGPHARGFWC*GPPCRW
Trigger: CCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCG...GGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CCA 90 bp CTTCTGTCATCACCTGGTCACTTGTCTGTCTCCCACACTAGCCTGGGATCCCCAGGTGCCCGCGGCTTCTaGTGTTGGGGACCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: LLSSPGHLSVSHTSLGSPGARGF*CWGPPC
Trigger: GCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACC...TGGGGATCCCAGGCTAGTGTGGGAGACAGACAAGTGACCAGGTGATGACAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCGGCCCAGATCCTGCTTaGTCACACCCAGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSGPDPA*SHPAQK
Trigger: CTTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCC...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GCTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTCTCTCACATGGGGACTaGGCCCAGATCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AGGERTVSMSSLGSGCRVLSHGD*AQILLG
Trigger: ACCAAGCAGGATCTGGGCCCAGTCCCCATGTGAGAG...AACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGGCCCCTGTTGACAGATaGAGATTGGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FLGPHAPVDRWRLGSRALAPVDR*RLGSRA
Trigger: GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC...CAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTACGCGCTGGTCATCCATaGCTGGCTTCTGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLRAGHP*LASDLP
Trigger: GGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCG...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGGCACTTGGGCCTGAATaGACCCGGGTGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGALGPE*TRVDSR
Trigger: CCTGCTGTCCACCCGGGTTCATTCAGGCCCAAGTGC...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR TCA 90 bp GCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGTGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: ATSWDLTPLLTDGDWAAGCLVQG*RKSQAP
Trigger: TGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACA...CCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp AGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTACAGGGCTCCGCGGCTaGACTTGCTCTCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: RWRLGSRALLHCYLLFRLTGLRG*TCSPGP
Trigger: GGGCCCCGGAGAGCAAGTGCAGCCGCGGAGCCCTGT...AAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp GACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATAGCACGCAGGTTCTCCAGCTaGAGGTTCTGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: DLRAVGEDTPAVADAPIARRFSS*RFWEVT
Trigger: AGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCG...TGCTATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR GCA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATGGCCATGCGCATCTTaGTCACAGGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLWPCAS*SQAWEA
Trigger: AGCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCA...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp CAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTGGCCATGCGCATCTTaGTCACAGGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QKTGPPVPVTHCSYGARGWPCAS*SQAWEA
Trigger: AGCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCA...GCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR GCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCGCAGCGGGGTGGCCATaGGCATCTTGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLAAGWP*ASCSQA
Trigger: AGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGC...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp CCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGATGAGGTACAGGGTTACTTGGTGGCATTCTaGATGGGCCCCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRVTKEPGTRVSWDEVQGYLVAF*MGPWGR
Trigger: CCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTA...ACCCTGTACCTCATCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp TGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATACCAGCAGTAGCCGATaGTCCCATAGCACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: WGPPCRWGRHTSSSRCSHTSSSR*SHSTGV
Trigger: CACTCCAGTGCTATGGGAGCATCGGCTACTGCTGGT...ATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp CTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTACCAGCAGTAGCCGATaGTCCCATAGCACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LTAVMVPAASGVGDLRAVTSSSR*SHSTGV
Trigger: CACTCCAGTGCTATGGGAGCATCGGCTACTGCTGGT...AACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp CAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCGTTCCAGTGACTCACTaGAGTTATGGTGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: QKTGPPVPVTHCSYGARGVPVTH*SYGARG
Trigger: GCCGCGGGCACCATAACTGCAGTGAGTCACTGGAAC...GCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTACTGGGCCCAGATCCTaGTTGGTCACACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLTGPRS*LVTPSP
Trigger: TGGGCTGGGTGTGACCAAGCAGGATCTGGGCCCAGT...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLEDRLC*SHMGTG
Trigger: CCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTC...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCTATCCCTTCTCCCTGTaGCTTCCCATCTCGTCCATG +
Preference number: 4 (lower is better)
Translates to: GWQDVEDRLCCSHMGTGPYPFSL*LPISSM
Trigger: CATGGACGAGATGGGAAGGCACAGGGAGAAGGGATA...GGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp CAGAAAAGGAATGCATGGCTGGAGGTGTCGGAGACCCAGGTTGGCATCCAGCTGTGGCAACGGGGGCTGTaGTTCCTCCTGGCAGCAACC +
Preference number: 4 (lower is better)
Translates to: QKRNAWLEVSETQVGIQLWQRGL*FLLAAT
Trigger: GGTTGCTGCCAGGAGGAAGCACAGCCCCCGTTGCCA...CAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCCTTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp AAGCTCCCCTTCAGTGGCGGGTACACCTTCAGGGGGTCAGCATTCTACAGGGTAGTGGGCCCAGAGCCTTaGACAGTGCTGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KLPFSGGYTFRGSAFYRVVGPEP*TVLEQV
Trigger: CACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCAC...TACCCTGTAGAATGCTGACCCCCTGAAGGTGTACCCGCCACTGAAGGGGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp TGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGGAAGTAGGCGGTGGTaGCCTGGCCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: WLSLQVNRLEKPRPKAGGGSRRW*PGQRGA
Trigger: TGCTCCTCGCTGGCCAGGCCACCACCGCCTACTTCC...CCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCAACAGGAAGTAGGCGGTaGTGGCCTGGCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: VADAPIALEWQIVAVLVATGSRR*WPGQRG
Trigger: TCCTCGCTGGCCAGGCCACCACCGCCTACTTCCTGT...TGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp CAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCAGATCCCAGGCTTGGGAGGCTTaGGAAGCTTCATGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: QDVEDRLCCSHMGTGPRSQAWEA*EASCAG
Trigger: ACCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTG...GGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000523208.6
CDS-3UTR CCA 90 bp CCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCGCATCAGCAGCGGGGTaGCCATGCGCATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PAQKTGPPVPVTHCSYGAASAAG*PCASCS
Trigger: TGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGC...GGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGCAGGGCTCCCATaGGCAGCGCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGGAGLP*AAPASA
Trigger: TGCTGATGCAGGCGCTGCCCATGGGAGCCCTGCCCC...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTGGGGCAGGGCTCCCATaGGCAGCGCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVGAGLP*AAPASA
Trigger: TGCTGATGCAGGCGCTGCCCATGGGAGCCCTGCCCC...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTCTGCATGGGCCCCTaGGGCAGGGCTCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDFCMGP*GRAPMG
Trigger: GCCCATGGGAGCCCTGCCCCAGGGGCCCATGCAGAA...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GCTGCTCCAGCCTGGAAATGCAGAAGCCCACTTCCCTGGGCCCAGAGCCATGTGTCGGTGGAGCGTCAGTaGGCTTTTGCTCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: AAPAWKCRSPLPWAQSHVSVERQ*AFAPRS
Trigger: ACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGA...CACATGGCTCTGGGCCCAGGGAAGTGGGCTTCTGCATTTCCAGGCTGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCTGGCCCAGATCCTGCTTaGTCACACCCAGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: APIALEWQIVAVLVALGPGPDPA*SHPAQK
Trigger: CTTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCC...AGGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCTCTGCTGCTCTCACATaGGGACTGGGCCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSSAALT*GLGPDP
Trigger: AGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGA...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTTCTGCTGCTCTCACATaGGGACTGGGCCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: VWGWQDVEDRLCCSHMGTSAALT*GLGPDP
Trigger: AGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGA...AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp GCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGAAAGGAATGCATGGCTaGAGGTGTCGGAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: ATSWDLTPLLTDGDWAAGKGMHG*RCRRPR
Trigger: CCTGGGTCTCCGACACCTCCAGCCATGCATTCCTTT...CCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GCTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTGAACACCAGGGGTCCTaGAGATGGTCTCCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: AGGERTVSMSSLGSGCRVEHQGS*RWSPEL
Trigger: AAGCTCTGGAGACCATCTCCAGGACCCCTGGTGTTC...AACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGTGGTGGCATTCTGCATaGGCTCTCCGGGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RWSVSGLLLQGVPAHFKQWWHSA*ALRGPR
Trigger: CCTGGGGCCCCGGAGAGCCCATGCAGAATGCCACCA...CTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp TGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATCCTCTTCCTGGCACTTaGTCAGTACTGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WGPPCRWGRHTSSSRCSHPLPGT*SVLEQV
Trigger: CACCTGCTCCAGTACTGACCAAGTGCCAGGAAGAGG...ATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523208.6
3UTR CAA 72 bp TCTCGCCGACACTCGGGATTCCCTCTTGCCTGCATGTaGAGGCTATGGGTGACCGTGGTTAGTGGGACAGGC +
Preference number: 4 (lower is better)
Translates to: SRRHSGFPLACM*RLWVTVVSGTG
Trigger: GCCTGTCCCACTAACCACGGTCACCCATAGCCTCAACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CAA 72 bp GGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTaGGAAGGGACTGTCTCGCCGACACTCGGGATTCCC +
Preference number: 4 (lower is better)
Translates to: GASSQCIWGTCF*EGTVSPTLGIP
Trigger: GGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR TCA 90 bp GTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCAGATCCTGCTTGTCCATGACTGGCTTCTaGTCTTCCCGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VEDRLCCSHMGTGPRSCLSMTGF*SSRQLL
Trigger: CAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGA...CAAGCAGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR TCA 90 bp CTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGCACTTGGGCCTGAATaGACCCGGGTGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGLSCPRVTKEPGTRVSWALGPE*TRVDSR
Trigger: CCTGCTGTCCACCCGGGTTCATTCAGGCCCAAGTGC...CCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR TCA 90 bp AAGGGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCCGTCGCACTTGGGCCTaGATGAACCCGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: KGASSQCIWGTCFLEGTVRRTWA*MNPGGQ
Trigger: CTGTCCACCCGGGTTCATTCAGGCCCAAGTGCGACG...GACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR TCA 90 bp ATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ICLAFGHFLGPHAPVDRWGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...CCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp TGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTCTCCGCGGCTGCACTTaGTCTCCGGGGCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSFQTGANGASSSQRPSSLRGCT*SPGPQG
Trigger: GCCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAG...ACTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR GCA 90 bp CCTGTACCTTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCCGCAGGTTCTCCAGCTaGAGGTTCTGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: PVPFGGASVGFCSKECLLRRFSS*RFWEVT
Trigger: AGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCG...GAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR GCA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGTACTTGGTGGCATTCTaGATGGGCCCCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLEYLVAF*MGPWGR
Trigger: CCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTA...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp CCCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PSPEDGSSSSSDSLQLWCASVGF*SKECLL
Trigger: GAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGC...GCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp GTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCATGTTGGGGACCTCCGTaGCGTTGGGGAAGACACACC +
Preference number: 4 (lower is better)
Translates to: VADAPIALEWQIVAVLVACWGPP*RWGRHT
Trigger: GGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACA...TGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp GTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCTCGCACTGGGCCCAGATCCTaGTTGGTCACACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VQAPSASGAHVSWKGLSRTGPRS*LVTPSP
Trigger: TGGGCTGGGTGTGACCAAGCAGGATCTGGGCCCAGT...GCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCACTGGGCCCAGATCCTaGTTGGTCACACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLTGPRS*LVTPSP
Trigger: TGGGCTGGGTGTGACCAAGCAGGATCTGGGCCCAGT...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGEDRLC*SHMGTG
Trigger: CCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTC...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: AVADAPIALEWQIVAVLVEDRLC*SHMGTG
Trigger: CCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTC...GACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTGGGCAGCAGGGCCTTaGTGCATTGTTATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAWAAGP*CIVICC
Trigger: ACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCA...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGCTGCTTCTCCTCCTGTaGATCTGGGACCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGLLLLL*IWDPDP
Trigger: GGGGTCAGGGTCCCAGATGCACAGGAGGAGAAGCAG...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377795.7
CDS-3UTR CCA 90 bp TGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCGCAGAGTCACCAGGATaGAAAAGCCTGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: CWGPPCRWGRHTSSSRCSAESPG*KSLCTG
Trigger: CCCTGTACACAGGCTTTTCCATCCTGGTGACTCTGC...GGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp GACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGAGGAAGTAGGCGGTGGTaGCCTGGCCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: DRWRLGSRALLHCYLLFRGSRRW*PGQRGA
Trigger: TGCTCCTCGCTGGCCAGGCCACCACCGCCTACTTCC...TCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGGTGGCATTCTGCATaGGCCCCTGGGGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVWWHSA*APGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCA...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GCTGCTCCAGCCTGGAAATGCAGAAGCCCACTTCCCTGGGCCCAGAGCCATGTGTGTTGCCATACTTGGTaGCATTCTGCATGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: AAPAWKCRSPLPWAQSHVCCHTW*HSAWAP
Trigger: AGGGGCCCATGCAGAATGCCACCAAGTATGGCAACA...CACATGGCTCTGGGCCCAGGGAAGTGGGCTTCTGCATTTCCAGGCTGGAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTGTTGCCATACTTGGTaGCATTCTGCATGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRACCHTW*HSAWAP
Trigger: AGGGGCCCATGCAGAATGCCACCAAGTATGGCAACA...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGTCGGTGGAGCGTCAGTaGGCTTTTGCTCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: FLGPHAPVDRWRLGSRALSVERQ*AFAPRS
Trigger: ACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGA...CAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR CCA 90 bp TGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCGACTCACTGCAGTTATaGTGCCCGCGGCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSHSTGVADSCRSRRTWADSLQL*CPRLLV
Trigger: CACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTC...GGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCTCACATGGGGACTaGGCCCAGATCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLLSHGD*AQILLG
Trigger: ACCAAGCAGGATCTGGGCCCAGTCCCCATGTGAGAG...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGGTCGGAGACCCAGGTTaGCATCCAGCTGCACCCTTG +
Preference number: 4 (lower is better)
Translates to: LPISSMSLGLGALCWRLLVGDPG*HPAAPL
Trigger: CAAGGGTGCAGCTGGATGCCAACCTGGGTCTCCGAC...CAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCAAATCGAGCTCACCATaGTTCTGTGGTGGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAKSSSP*FCGGEG
Trigger: GCCCTCACCACCACAGAACCATGGTGAGCTCGATTT...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTTGGCTGACCTCTTCCTaGCACTTGGTCAGTACTGGA +
Preference number: 4 (lower is better)
Translates to: LTAVMVPAASGVGDLRAVWLTSS*HLVSTG
Trigger: TCCAGTACTGACCAAGTGCCAGGAAGAGGTCAGCCA...AACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR TCA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGCGCGCTGGTCATCCATaGCTGGCTTCTGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGRAGHP*LASDLP
Trigger: GGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCG...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCACCTCACGCCCCTGTTaGCAGATGGAGATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLTSRPC*QMEIGQ
Trigger: CTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGT...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp CCCTGGAGGTGCCTGGTGAACAGCTGTGGCAGGCACAGCAGGTCTAGGAAAATCCTTCCCGACAGCTCCTaGTTCTCCTCCTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: PWRCLVNSCGRHSRSRKILPDSS*FSSCAS
Trigger: AGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAG...GATTTTCCTAGACCTGCTGTGCCTGCCACAGCTGTTCACCAGGCACCTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp GCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGACTCCGCGGCTGCACTTaGTCTCCGGGGCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALLSAVPTWFVLSKGDERLRGCT*SPGPQG
Trigger: GCCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAG...TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp ATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCGCAGGTTCTCCAGCTaGAGGTTCTGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: MSGTGICLAFGHFLGPHARRFSS*RFWEVT
Trigger: AGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCG...GGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGTGGCCATGCGCATCTTaGTCACAGGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLEWPCAS*SQAWEA
Trigger: AGCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCA...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp GACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGAGCAGCGGGGTGGCCATaGGCATCTTGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: DRWRLGSRALLHCYLLFRAAGWP*ASCSQA
Trigger: AGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGC...TCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp ATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGGCAGCGGGGTGGCCATaGGCATCTTGCTCACAGGCT +
Preference number: 4 (lower is better)
Translates to: MEIGQQGLAALLSAVPTWAAGWP*ASCSQA
Trigger: AGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGC...CCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp GGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: GAGRMLKTASAALTWGLGGPLSC*HTWWHS
Trigger: AGAATGCCACCAAGTATGGCAACATGACAGAGGACC...GCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp GCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGAACAGGAGCCAATGGTaGATCCAGCTCTCAAAGACC +
Preference number: 4 (lower is better)
Translates to: ATSWDLTPLLTDGDWAAGNRSQW*IQLSKT
Trigger: GGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTT...CCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR GCA 90 bp CCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGAACGGGGATCGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PRSWSLVLEAAVMSGTGIASVGF*SKECLL
Trigger: GAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGC...GATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR GCA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTTCACTGCAGTTATGGTaGCCGCGGCTTCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLSLQLW*PRLLVL
Trigger: CAACACCAGAAGCCGCGGGCACCATAACTGCAGTGA...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR GCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCGTTCCAGTGACTCACTaGAGTTATGGTGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLVPVTH*SYGARG
Trigger: GCCGCGGGCACCATAACTGCAGTGAGTCACTGGAAC...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR GCA 90 bp GGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTGGCGGGTAGTTCCAGTGACTCACTaGAGTTATGGTGCCCGCGGC +
Preference number: 4 (lower is better)
Translates to: GVLKVSQVLREAPLQWRVVPVTH*SYGARG
Trigger: GCCGCGGGCACCATAACTGCAGTGAGTCACTGGAAC...TACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCTTAAGAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp CCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGATGAGGTACAGGGTGTTGAAGACCGCCTCTaGTGCTCTCACATGGGGACT +
Preference number: 4 (lower is better)
Translates to: PRVTKEPGTRVSWDEVQGVEDRL*CSHMGT
Trigger: AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC...ACCCTGTACCTCATCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTAGCAGCAGGGCCTTGCTaGATTGTTATCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLAAGPC*IVICCS
Trigger: GGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGC...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp TGGGTCCAATTGCTCCCCATTGTGGGCCCAGAGCCTTGCACAGTGCTGGAGCAGTGGGCAGCAGGGCCTTaGTGCATTGTTATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WVQLLPIVGPEPCTVLEQWAAGP*CIVICC
Trigger: ACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCA...CTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCTATCCCTTCTCCCTGTaGCTTCCCATCTCGTCCATG +
Preference number: 4 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSYPFSL*LPISSM
Trigger: CATGGACGAGATGGGAAGGCACAGGGAGAAGGGATA...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGTATCCCTTCTCCCTGTaGCTTCCCATCTCGTCCATG +
Preference number: 4 (lower is better)
Translates to: FLGPHAPVDRWRLGSRALYPFSL*LPISSM
Trigger: CATGGACGAGATGGGAAGGCACAGGGAGAAGGGATA...CAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp AGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTGGCGGGTACACCTTCAGGACGAGACTGCAGCGTTaGGAGTCGAGTTCCAGATTC +
Preference number: 4 (lower is better)
Translates to: RCLRFSGKLPFSGGYTFRTRLQR*ESSSRF
Trigger: GAATCTGGAACTCGACTCGCAACGCTGCAGTCTCGT...CCTGAAGGTGTACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp GTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCAGATCCTGCTTGGAGATAAGGTCGCGCTaGTCATCCATGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VEDRLCCSHMGTGPRSCLEIRSR*SSMTGF
Trigger: GAAGCCAGTCATGGATGACCAGCGCGACCTTATCTC...CAAGCAGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp CTGTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGAGAGATAAGGTCGCGCTaGTCATCCATGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCGAGRMLKTASAALTWGEIRSR*SSMTGF
Trigger: GAAGCCAGTCATGGATGACCAGCGCGACCTTATCTC...TCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTGGCGCCGGCCCAGCATaGGCAGTTGCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVGAGPA*AVAHCW
Trigger: CCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCC...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGAACAGGAAGTAGGCGGTaGTGGCCTGGCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: DRWRLGSRALLHCYLLFRTGSRR*WPGQRG
Trigger: TCCTCGCTGGCCAGGCCACCACCGCCTACTTCCTGT...TCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCTGAACAGGCTTGGGAGGCTTaGGAAGCTTCATGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PIALEWQIVAVLVALGPEQAWEA*EASCAG
Trigger: ACCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTG...TTCAGGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGGCATCAGCAGCGGGGTaGCCATGCGCATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGEASAAG*PCASCS
Trigger: TGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGC...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGTCAGTACTTTCGGTaGAGCGTCAGTGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: VWGWQDVEDRLCCSHMGTGQYFR*SVSGLL
Trigger: CAAAAGCCCACTGACGCTCCACCGAAAGTACTGACC...AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp TGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATTGGCTGACCTCTTCCTaGCACTTGGTCAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: WGPPCRWGRHTSSSRCSHWLTSS*HLVSTF
Trigger: GAAAGTACTGACCAAGTGCCAGGAAGAGGTCAGCCA...ATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp CTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGGACCTCCGTGCCGTTaGGGAAGACACACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LGLSCPRVTKEPGTRVSWGPPCR*GRHTSS
Trigger: ACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCC...CCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CCA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGGGCCCAGATCCTGCTTaGTCACACCCAGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: APVDRWRLGSRALLHCYLGPDPA*SHPAQK
Trigger: CTTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCC...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCATCTGCTGCTCTCACATaGGGACTGGGCCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: VADAPIALEWQIVAVLVASAALT*GLGPDP
Trigger: AGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGA...TGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp TGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: WGPPCRWGRHTSSSRCSHKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...ATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGGCCCCTGTTGACAGATaGAGATTGGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGEAPVDR*RLGSRA
Trigger: GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTACATGAGCCTAGGTCTTaGAGCCTTGTGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLHEPRS*SLVLEA
Trigger: AGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATG...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTACAGGGTAGCAGGGCAGGAAGGATGGTTCAAGAAGAGCTCCCTGGCAGGCAGGCAGGGCAGGAAGGATaGTTCAAGAAGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LQGSRAGRMVQEELPGRQAGQEG*FKKSSL
Trigger: CAGGGAGCTCTTCTTGAACCATCCTTCCTGCCCTGC...CTGCCTGCCAGGGAGCTCTTCTTGAACCATCCTTCCTGCCCTGCTACCCTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp AGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTGGCGGGTACACCTTCAGGATTCTGCATGGGGCTTaGGAAGCTTCATGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: RCLRFSGKLPFSGGYTFRILHGA*EASCAG
Trigger: ACCTGCGCATGAAGCTTCCCAAGCCCCATGCAGAAT...CCTGAAGGTGTACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR TCA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGCGCGCTGGTCATCCATaGCTGGCTTCTGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGERAGHP*LASDLP
Trigger: GGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCG...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp CTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGCGCGCTGGTCATCCATaGCTGGCTTCTGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LGLSCPRVTKEPGTRVSWRAGHP*LASDLP
Trigger: GGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCG...CCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp TTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACGTCGCACTTGGGCCTaGATGAACCCGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: FRWSVSGLLLQGVPAHFKRRTWA*MNPGGQ
Trigger: CTGTCCACCCGGGTTCATTCAGGCCCAAGTGCGACG...TTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR TCA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGGTCCTCCAGTTCCAGTaGCTCTGGAGCAGGTGCATC +
Preference number: 4 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGEVLQFQ*LWSRCI
Trigger: GATGCACCTGCTCCAGAGTCACTGGAACTGGAGGAC...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377795.7
CDS-3UTR GCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCCTTCCCGACAGCTCCTaGTTCTCCTCCTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLLPDSS*FSSCAS
Trigger: AGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAG...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCCTTCCCGACAGCTCCTaGTTCTCCTCCTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: AVADAPIALEWQIVAVLVLPDSS*FSSCAS
Trigger: AGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAG...GACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp GGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTGGCGGGTACTTCCCGACAGCTCCTaGTTCTCCTCCTGTGCATCT +
Preference number: 4 (lower is better)
Translates to: GVLKVSQVLREAPLQWRVLPDSS*FSSCAS
Trigger: AGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAG...TACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCTTAAGAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR GCA 90 bp TGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGCGCAGGTTCTCCAGCTaGAGGTTCTGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: WLSLQVNRLEKPRPKAGGRRFSS*RFWEVT
Trigger: AGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCG...CCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp ATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTACTTGGTGGCATTCTaGATGGGCCCCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MEIGQQGLAALLSAVPTWYLVAF*MGPWGR
Trigger: CCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTA...CCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp ATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ICLAFGHFLGPHAPVDRWASVGF*SKECLL
Trigger: GAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGC...CCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR GCA 90 bp GTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCTCGCGGAGTGGCAGATAGTTaGCGTTCTCGTCGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VQAPSASGAHVSWKGLSRGVADS*RSRRTW
Trigger: CCAAGTGCGACGAGAACGGCAACTATCTGCCACTCC...GCGAGACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp GTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCATCACTGCAGTTATGGTaGCCGCGGCTTCTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VADAPIALEWQIVAVLVASLQLW*PRLLVL
Trigger: CAACACCAGAAGCCGCGGGCACCATAACTGCAGTGA...TGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR GCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTACTGGGCCCAGATCCTaGTTGGTCACACCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVTGPRS*LVTPSP
Trigger: TGGGCTGGGTGTGACCAAGCAGGATCTGGGCCCAGT...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCCCTGCAGCAGGGCCTTGCTaGATTGTTATCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GQSACPAWGLGVGLSLLPAAGPC*IVICCS
Trigger: GGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGC...AGGGAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGCCTTGTGTTGGAGGCTaGTGTGATGTCAGGAACGGG +
Preference number: 4 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGPCVGG*CDVRNG
Trigger: CCCGTTCCTGACATCACAGCAGCCTCCAACACAAGG...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGCCTTGTGTTGGAGGCTaGTGTGATGTCAGGAACGGG +
Preference number: 4 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLEPCVGG*CDVRNG
Trigger: CCCGTTCCTGACATCACAGCAGCCTCCAACACAAGG...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGAGGTTGGCATCCAGCTaGACCCTTGACTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKRLASS*TLDSGP
Trigger: GGGCCCCGAGTCAAGGGTGCAGCTGGATGCCAACCT...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp GTCTCCATGGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTTACTTGGTGGCATTCTaGATGGGCTCTCCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VSMVFLRCLRFSGKLPFSYLVAF*MGSPGP
Trigger: GGGCCCCGGAGAGCCCATGCAGAATGCCACCAAGTA...ACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCTTAAGAACACCATGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp GACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGGCGCCGGCCCAGCATaGGCAGTTGCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: DLPVYGLHGVLKVSQVLRGAGPA*AVAHCW
Trigger: CCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCC...CCGGAGAACCTGAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGACAGGAAGTAGGCGGTaGTGGCCTGGCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKTGSRR*WPGQRG
Trigger: TCCTCGCTGGCCAGGCCACCACCGCCTACTTCCTGT...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGACAGGAAGTAGGCGGTaGTGGCCTGGCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGTGSRR*WPGQRG
Trigger: TCCTCGCTGGCCAGGCCACCACCGCCTACTTCCTGT...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGCAGGCTTGGGAGGCTTaGGAAGCTTCATGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGLSCPRVTKEPGTRVSWQAWEA*EASCAG
Trigger: ACCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTG...CCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CCCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCTCTTGCTCACAGGCTTaGGAGGCTTGGGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSPEDGSSSSSDSLQLWCSCSQA*EAWEAS
Trigger: TGAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGA...GCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACGCATCAGCAGCGGGGTaGCCATGCGCATCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDASAAG*PCASCS
Trigger: TGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGC...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCTCATGTTGCCATACTTaGTGGCATTCTGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSSCCHT*WHSAWA
Trigger: GGCCCATGCAGAATGCCACCAAGTATGGCAACATGA...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCATCGGTGGAGCGTCAGTaGGCTTTTGCTCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: VADAPIALEWQIVAVLVASVERQ*AFAPRS
Trigger: ACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGA...TGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp AGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCCCATAGCACTGGAGTaGCAGATAGTTGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: SPEDGSSSSSDSLQLWCPPIALE*QIVAVL
Trigger: GAGAACGGCAACTATCTGCCACTCCAGTGCTATGGG...CGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp ATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGCTCTCACATGGGGACTaGGCCCAGATCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ICLAFGHFLGPHAPVDRWLSHGD*AQILLG
Trigger: ACCAAGCAGGATCTGGGCCCAGTCCCCATGTGAGAG...CCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTCTCACATGGGGACTaGGCCCAGATCCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: APVDRWRLGSRALLHCYLLSHGD*AQILLG
Trigger: ACCAAGCAGGATCTGGGCCCAGTCCCCATGTGAGAG...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCTGCTGCTCTCACATaGGGACTGGGCCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVSAALT*GLGPDP
Trigger: AGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGA...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: FLGPHAPVDRWRLGSRALKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...CAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATAGCAAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: DLRAVGEDTPAVADAPIAKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...TGCTATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTGGCACCAGGGTCTCATaGGATGAGGTACAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVGTRVS*DEVQGG
Trigger: CCCACCCTGTACCTCATCCCATGAGACCCTGGTGCC...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGTCTGCTGTTCCGACTTaGTTTGTCTTGTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: ATSWDLTPLLTDGDWAAGSAVPT*FVLSKG
Trigger: ACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGA...CCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTCAGCTTTCAGGTCTTACCTGCTCCAGCAGGTGAGGACCCAACCTTGACTGCCTTGACAGATGGAGATTaGGCAGCAGGGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LSFQVLPAPAGEDPTLTALTDGD*AAGPCC
Trigger: GCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAA...GGCAGTCAAGGTTGGGTCCTCACCTGCTGGAGCAGGTAAGACCTGAAAGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp CCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGGCCCCTGTTGACAGATaGAGATTGGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVDRWRLGSRALLHCYLLAPVDR*RLGSRA
Trigger: GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC...CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGCCCCTGTTGACAGATaGAGATTGGGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DGDWAAGPCCIVICCSDLAPVDR*RLGSRA
Trigger: GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC...CAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTTCTGTCATCACCTGGTCACTTGTCTGTCTCCCACACTAGCCTGGGATCCCCACTTTTGGCCACTTCCTaGGACCTCACGCCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LLSSPGHLSVSHTSLGSPLLATS*DLTPLL
Trigger: CAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAG...TGGGGATCCCAGGCTAGTGTGGGAGACAGACAAGTGACCAGGTGATGACAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCGATCTGTCTAGCTTTTaGCCACTTCCTGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSDLSSF*PLPGTS
Trigger: TGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATC...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTACAGGGTAGCAGGGCAGGAAGGATGGTTCAAGAAGAGCTCCCTGGCAGGCAGCATGAGCCTAGGTCTTaGAGCCTTGTGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LQGSRAGRMVQEELPGRQHEPRS*SLVLEA
Trigger: AGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATG...CTGCCTGCCAGGGAGCTCTTCTTGAACCATCCTTCCTGCCCTGCTACCCTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp ATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGCCGCAGGCATCTCTGTaGGTTACTTGGGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: ICLAFGHFLGPHAPVDRWPQASL*VTWAAF
Trigger: GAACGCAGCCCAAGTAACCCACAGAGATGCCTGCGG...CCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGATGATGTCTTGGGTGTaGACTGAGGGAGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LPISSMSLGLGALCWRLLMMSWV*TEGGEG
Trigger: TCCCTCCCCTCCCTCAGTCCACACCCAAGACATCAT...CAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
3UTR CAA 72 bp TTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: FLGPHAPVDRWR*GSRALLHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 72 bp AGGGTAGTCCAGCTGTTCAGCTACGAGACTGCAGCGTaGCGAGTCGAGTTCCAGATTCCAGGCCAGCTCTAC +
Preference number: 4 (lower is better)
Translates to: RVVQLFSYETAA*RVEFQIPGQLY
Trigger: GTAGAGCTGGCCTGGAATCTGGAACTCGACTCGCAACGCTGCAGTCTCGTAGCTGAACAGCTGGACTACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR TCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGCAGCAGGGATGTGGCTaGCCTCTTCCTGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKQQGCG*PLPGTW
Trigger: CCAAGTGCCAGGAAGAGGTCAGCCACATCCCTGCTG...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR TCA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGGGGCTGGCAGGATGTTaGAGACCGCCTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWGLAGC*RPPLLL
Trigger: GAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCC...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGTGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: APVDRWRLGSRALLHCYLCLVQG*RKSQAP
Trigger: TGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACA...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTACCTCACGCCCCTGTTaGCAGATGGAGATTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVTSRPC*QMEIGQ
Trigger: CTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGT...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACGTCCTCCAGTTCCAGTaGCTCTTTCGGTGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDVLQFQ*LFRWSV
Trigger: GACGCTCCACCGAAAGAGTCACTGGAACTGGAGGAC...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000353334.11
CDS-3UTR GCA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCGCTTGGGAAGCTTCATaGGCAGGTTCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVAWEAS*AGSPAA
Trigger: TGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGC...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp TGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGCTTGGGAAGCTTCATaGGCAGGTTCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: WLSLQVNRLEKPRPKAGGAWEAS*AGSPAA
Trigger: TGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGC...CCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGGCTTGGGAAGCTTCATaGGCAGGTTCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGEAWEAS*AGSPAA
Trigger: TGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGC...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp TCACACCCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGCTTGGGAAGCTTCATaGGCAGGTTCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SHPAQKTGPPVPVTHCSYAWEAS*AGSPAA
Trigger: TGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGC...ATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGGGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR GCA 90 bp CCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGAACGGGGATCGCATTCTGGAGCAGGTaGATCACATGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PRSWSLVLEAAVMSGTGIAFWSR*ITWSSV
Trigger: GACAGAGGACCATGTGATGCACCTGCTCCAGAATGC...GATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000353334.11
CDS-3UTR GCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCGCATTCTGGAGCAGGTaGATCACATGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLAFWSR*ITWSSV
Trigger: GACAGAGGACCATGTGATGCACCTGCTCCAGAATGC...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000353334.11
CDS-3UTR GCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKEDRLC*SHMGTG
Trigger: CCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTC...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp AAGGGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCGTTGAAGACCGCCTCTaGTGCTCTCACATGGGGACT +
Preference number: 4 (lower is better)
Translates to: KGASSQCIWGTCFLEGTVVEDRL*CSHMGT
Trigger: AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC...GACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGGTTGAAGACCGCCTCTaGTGCTCTCACATGGGGACT +
Preference number: 4 (lower is better)
Translates to: APVDRWRLGSRALLHCYLVEDRL*CSHMGT
Trigger: AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAAC...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGTGGGCAGCAGGGCCTTaGTGCATTGTTATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGWAAGP*CIVICC
Trigger: ACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCA...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCCTCGGGATTCCCTCTTaGCTGCATGTTGAGGCTATG +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLLGIPS*LHVEAM
Trigger: CATAGCCTCAACATGCAGGCAAGAGGGAATCCCGAG...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp GACTGCAGCGTTGCGAGTCGAGTTCCAGATTCCAGGCCAGCTCTACCAACAAGCGTTCAGCTACGAGACTaGAGCGTTGCGAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: DCSVASRVPDSRPALPTSVQLRD*SVASRV
Trigger: AACTCGACTCGCAACGCTGCAGTCTCGTAGCTGAAC...GCTTGTTGGTAGAGCTGGCCTGGAATCTGGAACTCGACTCGCAACGCTGCAGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp GGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCCCTCTGGTCATCCATGACTaGCTTCTGATCTTCCCGACA +
Preference number: 4 (lower is better)
Translates to: GQSACPAWGLGVGLSLLPLVIHD*LLIFPT
Trigger: TGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAG...AGGGAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCGAGATAAGGTCGCGCTaGTCATCCATGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLEIRSR*SSMTGF
Trigger: GAAGCCAGTCATGGATGACCAGCGCGACCTTATCTC...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGAGATAAGGTCGCGCTaGTCATCCATGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLEEIRSR*SSMTGF
Trigger: GAAGCCAGTCATGGATGACCAGCGCGACCTTATCTC...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGAACGGGGATCGCAGAGTCACCAGGATaGAAAAGCCTGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: PRSWSLVLEAAVMSGTGIAESPG*KSLCTG
Trigger: CCCTGTACACAGGCTTTTCCATCCTGGTGACTCTGC...GATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGACAGGAAGTAGGCGGTaGTGGCCTGGCCAGCGAGGA +
Preference number: 4 (lower is better)
Translates to: LLISNRSQWCIQLSKTFQTGSRR*WPGQRG
Trigger: TCCTCGCTGGCCAGGCCACCACCGCCTACTTCCTGT...CTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CCA 90 bp CCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCTGAATGTTGCCATACTTGGTaGCATTCTGCATGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: PIALEWQIVAVLVALGPECCHTW*HSAWAP
Trigger: AGGGGCCCATGCAGAATGCCACCAAGTATGGCAACA...TTCAGGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp GGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCCCTTCATGTTGCCATACTTaGTGGCATTCTGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: GQSACPAWGLGVGLSLLPSCCHT*WHSAWA
Trigger: GGCCCATGCAGAATGCCACCAAGTATGGCAACATGA...AGGGAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGTCATGTTGCCATACTTaGTGGCATTCTGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: PPVPVTHCSYGARGFWCWSCCHT*WHSAWA
Trigger: GGCCCATGCAGAATGCCACCAAGTATGGCAACATGA...CCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CCA 90 bp CCCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: PSPEDGSSSSSDSLQLWCSRCIT*SSVMLP
Trigger: TGGCAACATGACAGAGGACCATGTGATGCACCTGCT...GCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CCA 90 bp AAGGGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCAGGGGGTCAGCATTCTaGAGCAGGTGCATCACATGG +
Preference number: 4 (lower is better)
Translates to: KGASSQCIWGTCFLEGTVRGSAF*SRCITW
Trigger: CCATGTGATGCACCTGCTCCAGAATGCTGACCCCCT...GACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp AGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGAGGAGGGGGTCAGCATTCTaGAGCAGGTGCATCACATGG +
Preference number: 4 (lower is better)
Translates to: SLQVNRLEKPRPKAGGERRGSAF*SRCITW
Trigger: CCATGTGATGCACCTGCTCCAGAATGCTGACCCCCT...CCTCTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000353334.11
CDS-3UTR CCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCGGTCAGTACTTTCGGTaGAGCGTCAGTGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLGQYFR*SVSGLL
Trigger: CAAAAGCCCACTGACGCTCCACCGAAAGTACTGACC...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CCA 90 bp ATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTCTGCTGCTCTCACATaGGGACTGGGCCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: MEIGQQGLAALLSAVPTWSAALT*GLGPDP
Trigger: AGGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGA...CCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp AGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGAGGTTGACAGATGGAGATTaGGCAGCAGGGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLQVNRLEKPRPKAGGERLTDGD*AAGPCC
Trigger: GCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAA...CCTCTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp ATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGCTTTTGGCCACTTCCTaGGACCTCACGCCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: MEIGQQGLAALLSAVPTWLLATS*DLTPLL
Trigger: CAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAG...CCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGCTTTTGGCCACTTCCTaGGACCTCACGCCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: PVDRWRLGSRALLHCYLLLLATS*DLTPLL
Trigger: CAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAG...CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCTGATCTGTCTAGCTTTTaGCCACTTCCTGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: APIALEWQIVAVLVALGPDLSSF*PLPGTS
Trigger: TGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATC...AGGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp TTCTTGGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTGCATGTTCAGGGGTCCTGGAGATaGTCTCCAGAGCTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: FLEGTVSPTLGIPSCLHVQGSWR*SPELLA
Trigger: GGCTAAAAGCTCTGGAGACCATCTCCAGGACCCCTG...AACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCGACAGGATGATGTCTTaGGTGTGGACTGAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVDRMMS*VWTEGG
Trigger: CCCTCCCTCAGTCCACACCCAAGACATCATCCTGTC...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GCTACGAGACTGCAGCGTTGCGAGTCGAGTTCCAGATTCCAGGCCAGCTCTACCTGTTGCCATACTTGGTaGCATTCTGCATGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ATRLQRCESSSRFQASSTCCHTW*HSAWAL
Trigger: GAGAGCCCATGCAGAATGCCACCAAGTATGGCAACA...GGTAGAGCTGGCCTGGAATCTGGAACTCGACTCGCAACGCTGCAGTCTCGTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp GCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGTCAGTACTaGAGCAGGTGCATCACATGG +
Preference number: 4 (lower is better)
Translates to: AVADAPIALEWQIVAVLVALGQY*SRCITW
Trigger: CCATGTGATGCACCTGCTCCAGTACTGACCAAGTGC...GACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
3UTR CAA 72 bp CATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCAGGAACGGGGATCTGT +
Preference number: 4 (lower is better)
Translates to: HLVHEPRSWSLV*EAAVMSGTGIC
Trigger: ACAGATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp GACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGATGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: DRWRLGSRALLHCYLLFRCLVQG*RKSQAP
Trigger: TGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACA...TCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp GCTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTCCTTTTATTCTAATGTaGACCATGGCCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: AGGERTVSMSSLGSGCRVPFILM*TMALKA
Trigger: AGCTTTCAGGGCCATGGTTCACATTAGAATAAAAGG...AACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000377795.7
CDS-3UTR TCA 90 bp CCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGTGATGTCAGGAACGGGGATCCTTGGTCTTCCATTCTaGGGAATGGACCAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: PRSWSLVLEAAVMSGTGILGLPF*GMDQSY
Trigger: GTAGCTCTGGTCCATTCCTCAGAATGGAAGACCAAG...GATCCCCGTTCCTGACATCACAGCAGCCTCCAACACAAGGCTCCAAGACCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp CCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGATGAGGTACAGGGTGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PRVTKEPGTRVSWDEVQGGPLSC*HTWWHS
Trigger: AGAATGCCACCAAGTATGGCAACATGACAGAGGACC...ACCCTGTACCTCATCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp CCTGTACCTTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PVPFGGASVGFCSKECLLGPLSC*HTWWHS
Trigger: AGAATGCCACCAAGTATGGCAACATGACAGAGGACC...GAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR GCA 90 bp CCTTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAGCATTCTGGAGCAGGTaGATCACATGGTCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PFGGASVGFCSKECLLISAFWSR*ITWSSV
Trigger: GACAGAGGACCATGTGATGCACCTGCTCCAGAATGC...TGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR GCA 90 bp ATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCAACAGGAGCCAATGGTaGATCCAGCTCTCAAAGACC +
Preference number: 4 (lower is better)
Translates to: MSGTGICLAFGHFLGPHANRSQW*IQLSKT
Trigger: GGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTT...GGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR GCA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVAPRSA*SFQTGA
Trigger: GGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGC...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR GCA 90 bp GATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGACCAGCAGTAGCCGATaGTCCCATAGCACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: DGDWAAGPCCIVICCSDLTSSSR*SHSTGV
Trigger: CACTCCAGTGCTATGGGAGCATCGGCTACTGCTGGT...CAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR GCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTAGTGAAGTGCCTGAGTaGCGAATTGGTGGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVSEVPE*RIGGEG
Trigger: GCCTTCCCCACCAATTCGGCACTCAGGCACTTCACT...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp CCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGGACTTGGAGGAAGGGTaGAAGCTCCCAGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: PVDRWRLGSRALLHCYLLDLEEG*KLPVHL
Trigger: CAGATGCACTGGGAGCTTGCACCCTTCCTCCAAGTC...CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp GGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTGGCGGGTATACTTGGTGGCATTCTaGATGGGGCTTGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: GVLKVSQVLREAPLQWRVYLVAF*MGLGKL
Trigger: AAGCTTCCCAAGCCCCATGCAGAATGCCACCAAGTA...TACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCTTAAGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCGCCGGCCCAGCATaGGCAGTTGCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPGAGPA*AVAHCW
Trigger: CCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCC...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGGAAGTAGGCGGTGGTaGCCTGGCCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LHCYLLFRLGLSCPRVTKGSRRW*PGQRGA
Trigger: TGCTCCTCGCTGGCCAGGCCACCACCGCCTACTTCC...TTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp AAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCAGGTTCTCGGAAGTAGGCGGTGGTaGCCTGGCCAGCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KDLPVYGLHGVLKVSQVLGSRRW*PGQRGA
Trigger: TGCTCCTCGCTGGCCAGGCCACCACCGCCTACTTCC...GAGAACCTGAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGCAGGCTTGGGAGGCTTaGGAAGCTTCATGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKQAWEA*EASCAG
Trigger: ACCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTG...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LPISSMSLGLGALCWRLLSRCIT*SSVMLP
Trigger: TGGCAACATGACAGAGGACCATGTGATGCACCTGCT...CAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAAGGGGGTCAGCATTCTaGAGCAGGTGCATCACATGG +
Preference number: 4 (lower is better)
Translates to: VERQWAFAPRSACSFQTGRGSAF*SRCITW
Trigger: CCATGTGATGCACCTGCTCCAGAATGCTGACCCCCT...TCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CCA 90 bp CAGAAAAGGAATGCATGGCTGGAGGTGTCGGAGACCCAGGTTGGCATCCAGCTGAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: QKRNAWLEVSETQVGIQLKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...CAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCCTTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGATTGACAGATGGAGATTaGGCAGCAGGGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGLTDGD*AAGPCC
Trigger: GCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAA...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGACAGATGGAGATTaGGCAGCAGGGCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDLTDGD*AAGPCC
Trigger: GCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAA...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGCTTTTGGCCACTTCCTaGGACCTCACGCCCCTGTTG +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKLLATS*DLTPLL
Trigger: CAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAG...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGCCCTTAGGTAAGGCATaGGCACCCAGTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: PVDRWRLGSRALLHCYLLPLGKA*APSSPQ
Trigger: CTGTGGAGAACTGGGTGCCCATGCCTTACCTAAGGG...CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGAGCCTTGCACAGTGCTaGAGCAGGTGCATCACATGG +
Preference number: 4 (lower is better)
Translates to: DGDWAAGPCCIVICCSDLSLAQC*SRCITW
Trigger: CCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCT...CAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CAA 72 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: APVDRWRLGSRA*LHCYLLFRLGL
Trigger: CAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 72 bp ACTCCCTGTACCTTTCGGTGGAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: TPCTFRWSVSGL*LQGVPAHFKQE
Trigger: CTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR TCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGTCCATGACTGGCTTCTaGTCTTCCCGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKSMTGF*SSRQLL
Trigger: CAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGA...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp TTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAATCCATGACTGGCTTCTaGTCTTCCCGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: FRWSVSGLLLQGVPAHFKSMTGF*SSRQLL
Trigger: CAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGA...TTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR TCA 90 bp CAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAACGCGCTGGTCATCCATaGCTGGCTTCTGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: QGVPAHFKQEPMVHPALKRAGHP*LASDLP
Trigger: GGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCG...TTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR TCA 90 bp TTCTTGGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTGCATGTTATGGTTCTGTGGTGGTaGGGGCAAGAAGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: FLEGTVSPTLGIPSCLHVMVLWW*GQEVDE
Trigger: TTCATCCACTTCTTGCCCTCACCACCACAGAACCAT...AACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR TCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGTGCCCCCAGCTAGGTTaGGTCCTCTGCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKCPQLG*VLCLFL
Trigger: AAGAAAGAGGCAGAGGACTCAACCTAGCTGGGGGCA...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp CTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGCCCAGCATGGGCAGTTaGTCATTGTTGGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: LGLSCPRVTKEPGTRVSWPSMGS*SLLEIR
Trigger: CCTTATCTCCAACAATGAGCAACTGCCCATGCTGGG...CCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp AGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGAGGAACAGGAGCCAATGGTaGATCCAGCTCTCAAAGACC +
Preference number: 4 (lower is better)
Translates to: SLQVNRLEKPRPKAGGERNRSQW*IQLSKT
Trigger: GGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTT...CCTCTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR GCA 90 bp CTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQGVPAHFKQEPMVHPALAPRSA*SFQTGA
Trigger: GGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGC...GAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR GCA 90 bp CAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCTGTTGGGGACCTCCGTaGCGTTGGGGAAGACACACC +
Preference number: 4 (lower is better)
Translates to: QLSKTFQSMVSMVFLRCLCWGPP*RWGRHT
Trigger: GGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACA...GAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp TTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTCTATGGGAAGACCGCCTCTGCTaGTCTCACATGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: FQTGANGASSSQRPSSLWEDRLC*SHMGTG
Trigger: CCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTC...CCATAGACTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTGCAGCAGGGCCTTGCTaGATTGTTATCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVAAGPC*IVICCS
Trigger: GGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGC...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGCAGCAGGGCCTTGCTaGATTGTTATCTGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: DGDWAAGPCCIVICCSDLAAGPC*IVICCS
Trigger: GGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGC...CAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCCTTGTGTTGGAGGCTaGTGTGATGTCAGGAACGGG +
Preference number: 4 (lower is better)
Translates to: GFCSKECLLISNRSQWCIPCVGG*CDVRNG
Trigger: CCCGTTCCTGACATCACAGCAGCCTCCAACACAAGG...GATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp TTCTTGGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTGCATGTTGAGCTTTTAGCCTCATaGTGGAAACAGCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FLEGTVSPTLGIPSCLHVELLAS*WKQPEA
Trigger: TGCCTCTGGCTGTTTCCAGCATGAGGCTAAAAGCTC...AACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCAAAGGAGGTGGTCTaGTGCTCCAGCCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKAKEVV*CSSLEM
Trigger: CATTTCCAGGCTGGAGCAGCAGACCACCTCCTTTGC...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGGCGCCGGCCCAGCATaGGCAGTTGCTCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: ALLSAVPTWFVLSKGDERGAGPA*AVAHCW
Trigger: CCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCC...TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCGCAGAGTCACCAGGATaGAAAAGCCTGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: VGFCSKECLLISNRSQWCAESPG*KSLCTG
Trigger: CCCTGTACACAGGCTTTTCCATCCTGGTGACTCTGC...GCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CCA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTCTTGCTCACAGGCTTaGGAGGCTTGGGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDSCSQA*EAWEAS
Trigger: TGAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGA...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTGTTGCCATACTTGGTaGCATTCTGCATGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDCCHTW*HSAWAP
Trigger: AGGGGCCCATGCAGAATGCCACCAAGTATGGCAACA...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGTCATGTTGCCATACTTaGTGGCATTCTGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGESCCHT*WHSAWA
Trigger: GGCCCATGCAGAATGCCACCAAGTATGGCAACATGA...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp CGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: RWSVSGLLLQGVPAHFKQSRCIT*SSVMLP
Trigger: TGGCAACATGACAGAGGACCATGTGATGCACCTGCT...CTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CCA 90 bp TTCTTGGAAGGGACTGTCTCGCCGACACTCGGGATTCCCTCTTGCCTGCATGTTTGGCTGACCTCTTCCTaGCACTTGGTCAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: FLEGTVSPTLGIPSCLHVWLTSS*HLVSTF
Trigger: GAAAGTACTGACCAAGTGCCAGGAAGAGGTCAGCCA...AACATGCAGGCAAGAGGGAATCCCGAGTGTCGGCGAGACAGTCCCTTCCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCCCAGATCCTGCTTaGTCACACCCAGCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPGPDPA*SHPAQK
Trigger: CTTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCC...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCGGCACCAGGGTCTCATaGGATGAGGTACAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLSAVPTWFVLSKGDERAGTRVS*DEVQGG
Trigger: CCCACCCTGTACCTCATCCCATGAGACCCTGGTGCC...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp TTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTCTATGGGGCACCAGGGTCTCATaGGATGAGGTACAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FQTGANGASSSQRPSSLWGTRVS*DEVQGG
Trigger: CCCACCCTGTACCTCATCCCATGAGACCCTGGTGCC...CCATAGACTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGTCTGCTGTTCCGACTTaGTTTGTCTTGTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLESAVPT*FVLSKG
Trigger: ACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGA...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGGATCTGTCTAGCTTTTaGCCACTTCCTGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: APVDRWRLGSRALLHCYLDLSSF*PLPGTS
Trigger: TGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATC...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGACATGAGCCTAGGTCTTaGAGCCTTGTGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGHEPRS*SLVLEA
Trigger: AGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATG...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp AGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTTCTCTGTGGGTTACTTaGGCTGCGTTCTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: RWRLGSRALLHCYLLFRLSLWVT*AAFSHL
Trigger: GAGGTGGGAGAACGCAGCCCAAGTAACCCACAGAGA...AAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTGCATGTTGAGGCTATaGGTGACCGTGGTTAGTGGG +
Preference number: 4 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDCMLRL*VTVVSG
Trigger: CCCACTAACCACGGTCACCCATAGCCTCAACATGCA...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp TGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGAGCTCCCAGTGCATCTaGGGCACATGTTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: WLSLQVNRLEKPRPKAGGSSQCI*GTCFLE
Trigger: TTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCT...CCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGAATTGCTCCCCATTGTaGGCCCAGAGCCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGNCSPL*AQSLAQ
Trigger: CTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATT...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
3UTR CAA 72 bp GCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTaGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGT +
Preference number: 4 (lower is better)
Translates to: AALLSAVPTWFV*SKGDERARHQG
Trigger: ACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 72 bp GCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: ALLHCYLLFRLG*SCPRVTKEPGT
Trigger: GGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 72 bp CTTGGTCAGTACTTTCGGTGGAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: LGQYFRWSVSGL*LQGVPAHFKQE
Trigger: CTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGTACTGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR TCA 90 bp TCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGACTGGCTTCTaGTCTTCCCGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SNRSQWCIQLSKTFQSMVSMTGF*SSRQLL
Trigger: CAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGA...GACCATAGACTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR TCA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGTGTCTTGTCCAAGGGTaGCGAAAGAGCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWCLVQG*RKSQAP
Trigger: TGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACA...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGGTTCTCCCACCTCAGTaGCTGGATTTAGCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: APVDRWRLGSRALLHCYLVLPPQ*LDLASL
Trigger: TAAAGACGCTAAATCCAGTCACTGAGGTGGGAGAAC...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp CTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACTGGCCATGCGCATCTTaGTCACAGGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LAALLSAVPTWFVLSKGDWPCAS*SQAWEA
Trigger: AGCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCA...GTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR GCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKAPRSA*SFQTGA
Trigger: GGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGC...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR GCA 90 bp GGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GVPAHFKQEPMVHPALKDAPRSA*SFQTGA
Trigger: GGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGC...GTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR GCA 90 bp CAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QLSKTFQSMVSMVFLRCLASVGF*SKECLL
Trigger: GAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGC...GAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR GCA 90 bp TTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGGGAGTGGCAGATAGTTaGCGTTCTCGTCGCACTTGG +
Preference number: 4 (lower is better)
Translates to: FCSKECLLISNRSQWCIQGVADS*RSRRTW
Trigger: CCAAGTGCGACGAGAACGGCAACTATCTGCCACTCC...CTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp CCCTGGAGGTGCCTGGTGAACAGCTGTGGCAGGCACAGCAGGTCTAGGAAAATCTGCTGCATTGTTATCTaGTGTTCCGACTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PWRCLVNSCGRHSRSRKICCIVI*CSDLVC
Trigger: ACAAACCAAGTCGGAACAGCAGATAACAATGCAGCA...GATTTTCCTAGACCTGCTGTGCCTGCCACAGCTGTTCACCAGGCACCTCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp CCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCTGCTGCATTGTTATCTaGTGTTCCGACTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PAQKTGPPVPVTHCSYGACCIVI*CSDLVC
Trigger: ACAAACCAAGTCGGAACAGCAGATAACAATGCAGCA...GGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp TATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCTGGGCAGCAGGGCCTTaGTGCATTGTTATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: YLLFRLGLSCPRVTKEPGWAAGP*CIVICC
Trigger: ACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCA...GCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp GGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCTATCCCTTCTCCCTGTaGCTTCCCATCTCGTCCATG +
Preference number: 4 (lower is better)
Translates to: GFCSKECLLISNRSQWCIYPFSL*LPISSM
Trigger: CATGGACGAGATGGGAAGGCACAGGGAGAAGGGATA...GATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR GCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCGCTCCAGCCTGGAAATaGAGAAGCCCACTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLSAVPTWFVLSKGDERAAPAWK*RSPLPW
Trigger: CCAGGGAAGTGGGCTTCTGCATTTCCAGGCTGGAGC...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCAAATCGGAAGTGAGTTaGCCCTCAAATCGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVKSEVS*PSNRAH
Trigger: GTGAGCTCGATTTGAGGGGCAACTCACTTCCGATTT...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACGAGATAAGGTCGCGCTaGTCATCCATGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: GVPAHFKQEPMVHPALKDEIRSR*SSMTGF
Trigger: GAAGCCAGTCATGGATGACCAGCGCGACCTTATCTC...GTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CCA 90 bp TATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCGCAGAGTCACCAGGATaGAAAAGCCTGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: YLLFRLGLSCPRVTKEPGAESPG*KSLCTG
Trigger: CCCTGTACACAGGCTTTTCCATCCTGGTGACTCTGC...GCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp AGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTTCTTGCTCACAGGCTTaGGAGGCTTGGGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RWRLGSRALLHCYLLFRLSCSQA*EAWEAS
Trigger: TGAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGA...AAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGTCTTGCTCACAGGCTTaGGAGGCTTGGGAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKSCSQA*EAWEAS
Trigger: TGAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGA...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp ATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MEIGQQGLAALLSAVPTWSRCIT*SSVMLP
Trigger: TGGCAACATGACAGAGGACCATGTGATGCACCTGCT...CCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp AAGGGTGCAAGCTCCCAGTGCATCTGGGGCACATGTTTCTTGGAAGGGACTGTCTCAAACAGGAGCCAATaGTGCATCCAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: KGASSQCIWGTCFLEGTVSNRSQ*CIQLSK
Trigger: CTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGA...GACAGTCCCTTCCAAGAAACATGTGCCCCAGATGCACTGGGAGCTTGCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTCGGTGGAGCGTCAGTaGGCTTTTGCTCCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: LLISNRSQWCIQLSKTFQSVERQ*AFAPRS
Trigger: ACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGA...CTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CCA 90 bp TTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACCTCTTCCTGGCACTTaGTCAGTACTTTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FRWSVSGLLLQGVPAHFKPLPGT*SVLSVE
Trigger: CTCCACCGAAAGTACTGACCAAGTGCCAGGAAGAGG...TTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp GGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCCCATAGCACTGGAGTaGCAGATAGTTGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: GVPAHFKQEPMVHPALKDPIALE*QIVAVL
Trigger: GAGAACGGCAACTATCTGCCACTCCAGTGCTATGGG...GTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp CCAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTGACTCACTGCAGTTATaGTGCCCGCGGCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PALKDLPVYGLHGVLKVSDSLQL*CPRLLV
Trigger: CACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTC...AGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTAAAGCTGTAGCTGTGTaGGGCTGGCAGGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVKAVAV*GWQDVE
Trigger: TTCAACATCCTGCCAGCCCCACACAGCTACAGCTTT...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGCATGAGCCTAGGTCTTaGAGCCTTGTGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGHEPRS*SLVLEA
Trigger: AGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATG...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTAAGAAAGGATTATGGGTaGAAAACATTGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLRKDYG*KTLALP
Trigger: AGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCT...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGCAGAAAAGGAATGCATaGCTGGAGGTGTCGGAGACC +
Preference number: 4 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGQKRNA*LEVSET
Trigger: GGTCTCCGACACCTCCAGCCATGCATTCCTTTTCTG...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp TATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCTCTGCTGCTCCAGCCTaGAAATGCAGAAGCCCACTT +
Preference number: 4 (lower is better)
Translates to: YLLFRLGLSCPRVTKEPGSAAPA*KCRSPL
Trigger: AAGTGGGCTTCTGCATTTCCAGGCTGGAGCAGCAGA...GCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGCCCAAAGACAAGAAATaGAAGGGGCTGAGAATCCTC +
Preference number: 4 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGEPKDKK*KGLRIL
Trigger: GAGGATTCTCAGCCCCTTCCATTTCTTGTCTTTGGG...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp AGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGAGGTCATGTTGCCATACTTaGTGGCATTCTGCATGGGCT +
Preference number: 4 (lower is better)
Translates to: SLQVNRLEKPRPKAGGERSCCHT*WHSAWA
Trigger: AGCCCATGCAGAATGCCACCAAGTATGGCAACATGA...CCTCTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CCA 90 bp CAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAACCAGTGTCCTCCCTGTaGATGGCTGCTCAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: QGVPAHFKQEPMVHPALKPVSSL*MAAQLS
Trigger: TGAAAGCTGAGCAGCCATCCACAGGGAGGACACTGG...TTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR TCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCATCCATGACTGGCTTCTaGTCTTCCCGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPSMTGF*SSRQLL
Trigger: CAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGA...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTGAACCATGGCCCTaGAAGCTGATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVCEPWP*KLITSL
Trigger: CAAGCTTGTTATCAGCTTTCAGGGCCATGGTTCACA...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp CCCTGGAGGTGCCTGGTGAACAGCTGTGGCAGGCACAGCAGGTCTAGGAAAATCTTTCACTGCAGTTCTTaGTTTCTGGCTCCTCTTAAA +
Preference number: 4 (lower is better)
Translates to: PWRCLVNSCGRHSRSRKIFHCSS*FLAPLK
Trigger: TTTAAGAGGAGCCAGAAATCAAGAACTGCAGTGAAA...GATTTTCCTAGACCTGCTGTGCCTGCCACAGCTGTTCACCAGGCACCTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp AAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCAGGTTCTCCGCTTGGGAAGCTTCATaGGCAGGTTCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KTFQSMVSMVFLRCLRFSAWEAS*AGSPAA
Trigger: TGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGC...GGAGAACCTGAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR GCA 90 bp ATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: MEIGQQGLAALLSAVPTWGPLSC*HTWWHS
Trigger: AGAATGCCACCAAGTATGGCAACATGACAGAGGACC...CCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCTGCTGCATTGTTATCTaGTGTTCCGACTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLCCIVI*CSDLVC
Trigger: ACAAACCAAGTCGGAACAGCAGATAACAATGCAGCA...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGTGCTGCATTGTTATCTaGTGTTCCGACTTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLECCIVI*CSDLVC
Trigger: ACAAACCAAGTCGGAACAGCAGATAACAATGCAGCA...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCACCTTGTGTTGGAGGCTaGTGTGATGTCAGGAACGGG +
Preference number: 4 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPPCVGG*CDVRNG
Trigger: CCCGTTCCTGACATCACAGCAGCCTCCAACACAAGG...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGTGCAAGCTCCCAGTaGATCTGGGGCACATGTTTC +
Preference number: 4 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPGASSQ*IWGTCF
Trigger: GAAACATGTGCCCCAGATGCACTGGGAGCTTGCACC...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp AGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTCTGGTCATCCATGACTaGCTTCTGATCTTCCCGACA +
Preference number: 4 (lower is better)
Translates to: RWRLGSRALLHCYLLFRLLVIHD*LLIFPT
Trigger: TGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAG...AAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCAGGTTCTCCGGCTGGTCATCCATGACTaGCTTCTGATCTTCCCGACA +
Preference number: 4 (lower is better)
Translates to: DLPVYGLHGVLKVSQVLRLVIHD*LLIFPT
Trigger: TGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAG...CCGGAGAACCTGAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CCA 90 bp AGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGATCTGTCTAGCTTTTaGCCACTTCCTGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: RWRLGSRALLHCYLLFRLDLSSF*PLPGTS
Trigger: TGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATC...AAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CCAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCCCTGTACCTTTCGGTaGAGCGTCAGTGGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PALKDLPVYGLHGVLKVSPCTFR*SVSGLL
Trigger: CAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGG...AGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR GCA 90 bp AGACAAGAAATGGAAGGGGCTGAGAATCCTCGAGTTAGGCCTCGAGCTAGGGGCTCCTCTCAAGCATGTTaGTCTAGAACAGAACTACAG +
Preference number: 4 (lower is better)
Translates to: RQEMEGAENPRVRPRARGSSQAC*SRTELQ
Trigger: CTGTAGTTCTGTTCTAGAGCAACATGCTTGAGAGGA...GCCCCTAGCTCGAGGCCTAACTCGAGGATTCTCAGCCCCTTCCATTTCTTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCGGATTCCCTCTTGCCTaGATGTTGAGGCTATGGGTG +
Preference number: 4 (lower is better)
Translates to: LLSAVPTWFVLSKGDERAGFPLA*MLRLWV
Trigger: CACCCATAGCCTCAACATGCAGGCAAGAGGGAATCC...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAGATAAGGTCGCGCTaGTCATCCATGACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LAALLSAVPTWFVLSKGDEIRSR*SSMTGF
Trigger: GAAGCCAGTCATGGATGACCAGCGCGACCTTATCTC...GTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGCAGAGTCACCAGGATaGAAAAGCCTGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPAESPG*KSLCTG
Trigger: CCCTGTACACAGGCTTTTCCATCCTGGTGACTCTGC...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CCA 90 bp TATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCTCAAACAGGAGCCAATaGTGCATCCAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: YLLFRLGLSCPRVTKEPGSNRSQ*CIQLSK
Trigger: CTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGA...GCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR CCA 90 bp GGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATTCAAACAGGAGCCAATaGTGCATCCAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLLLQGVPAHFKQEPMVHSNRSQ*CIQLSK
Trigger: CTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGA...ATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCCCCATAGCACTGGAGTaGCAGATAGTTGCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: LLSAVPTWFVLSKGDERAPIALE*QIVAVL
Trigger: GAGAACGGCAACTATCTGCCACTCCAGTGCTATGGG...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CCA 90 bp AGAGTAGTGTCCTCATTGGGCCTTGTTGACCCACAGCAAGACTTTAAACTTAAAGGACCTCCGTGCCGTTaGGGAAGACACACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RVVSSLGLVDPQQDFKLKGPPCR*GRHTSS
Trigger: ACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCC...TTTAAGTTTAAAGTCTTGCTGTGGGTCAACAAGGCCCAATGAGGACACTACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp TATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCTCTGCTGTTCCGACTTaGTTTGTCTTGTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: YLLFRLGLSCPRVTKEPGSAVPT*FVLSKG
Trigger: ACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGA...GCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAAGACCCTCCACCATCTaGCCTCTCTCCTCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LHCYLLFRLGLSCPRVTKRPSTI*PLSSQA
Trigger: TGCTTGAGAGGAGAGAGGCCAGATGGTGGAGGGTCT...TTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTGTTGCCATACTTGGTaGCATTCTGCATGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLISNRSQWCIQLSKTFQCCHTW*HSAWGL
Trigger: CAAGCCCCATGCAGAATGCCACCAAGTATGGCAACA...CTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CCA 90 bp CAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAATCATGTTGCCATACTTaGTGGCATTCTGCATGGGGC +
Preference number: 4 (lower is better)
Translates to: QGVPAHFKQEPMVHPALKSCCHT*WHSAWG
Trigger: GCCCCATGCAGAATGCCACCAAGTATGGCAACATGA...TTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR TCA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGTGTGAACCATGGCCCTaGAAGCTGATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWCEPWP*KLITSL
Trigger: CAAGCTTGTTATCAGCTTTCAGGGCCATGGTTCACA...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp CTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTGTGAACCATGGCCCTaGAAGCTGATAACAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LLISNRSQWCIQLSKTFQCEPWP*KLITSL
Trigger: CAAGCTTGTTATCAGCTTTCAGGGCCATGGTTCACA...CTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR TCA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTCCTTTTATTCTAATGTaGACCATGGCCCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVPFILM*TMALKA
Trigger: AGCTTTCAGGGCCATGGTTCACATTAGAATAAAAGG...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000377795.7
CDS-3UTR GCA 90 bp AGAGTAGTGTCCTCATTGGGCCTTGTTGACCCACAGCAAGACTTTAAACTTAAACGCAGGTTCTCCAGCTaGAGGTTCTGGGAGGTGACT +
Preference number: 4 (lower is better)
Translates to: RVVSSLGLVDPQQDFKLKRRFSS*RFWEVT
Trigger: AGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCG...TTTAAGTTTAAAGTCTTGCTGTGGGTCAACAAGGCCCAATGAGGACACTACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp CATCCAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGAACAGGAGCCAATGGTaGATCCAGCTCTCAAAGACC +
Preference number: 4 (lower is better)
Translates to: HPALKDLPVYGLHGVLKVNRSQW*IQLSKT
Trigger: GGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTT...CACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCCTGGTCATCCATGACTaGCTTCTGATCTTCCCGACA +
Preference number: 4 (lower is better)
Translates to: LLSAVPTWFVLSKGDERALVIHD*LLIFPT
Trigger: TGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAG...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LAALLSAVPTWFVLSKGDSRCIT*SSVMLP
Trigger: TGGCAACATGACAGAGGACCATGTGATGCACCTGCT...GTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPSRCIT*SSVMLP
Trigger: TGGCAACATGACAGAGGACCATGTGATGCACCTGCT...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp CTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGAATCAAACAGGAGCCAATaGTGCATCCAGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LPVYGLHGVLKVSQVLRESNRSQ*CIQLSK
Trigger: CTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGA...TTCCCGGAGAACCTGAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR GCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: LLSAVPTWFVLSKGDERAGPLSC*HTWWHS
Trigger: AGAATGCCACCAAGTATGGCAACATGACAGAGGACC...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACAGAAAGGATTATGGGTaGAAAACATTGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDRKDYG*KTLALP
Trigger: AGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCT...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR TCA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCGGGGACATAGGAAAATaGAAGCTGTACCAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LLSAVPTWFVLSKGDERAGDIGK*KLYQEE
Trigger: CTCTTCTTGGTACAGCTTTCATTTTCCTATGTCCCC...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp TTCGTGTGTGTTAAACATGTAATCAAGTATGTCTGTGTCCAAAGACTACAAGCCGACTCACTGCAGTTATaGTGCCCGCGGCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: FVCVKHVIKYVCVQRLQADSLQL*CPRLLV
Trigger: CACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTC...GGCTTGTAGTCTTTGGACACAGACATACTTGATTACATGTTTAACACACACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGATCTGCTGTTCCGACTTaGTTTGTCTTGTCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: ALLSAVPTWFVLSKGDERSAVPT*FVLSKG
Trigger: ACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGA...TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CCA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGAGAAAGGATTATGGGTaGAAAACATTGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKRKDYG*KTLALP
Trigger: AGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCT...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR GCA 90 bp TATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCTGGTTGATTTCCTGTTaGCAGAGTAAGTCATGTAAA +
Preference number: 4 (lower is better)
Translates to: YLLFRLGLSCPRVTKEPGWLISC*QSKSCK
Trigger: TTTACATGACTTACTCTGGCAACAGGAAATCAACCA...GCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAACTAAAGGATGGTCATaGTTGATTTCCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPTKGWS*LISCCQ
Trigger: CTGGCAACAGGAAATCAACCATGACCATCCTTTAGT...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GCCATCTGTCATCACATTCACACTGTTCTTAGTATAGAAATGAAATTGGGGACAGGGGCACATGTTTCTTaGAAGGGACTGTCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: AICHHIHTVLSIEMKLGTGAHVS*KGLSRR
Trigger: TCGGCGAGACAGTCCCTTCCAAGAAACATGTGCCCC...TGTCCCCAATTTCATTTCTATACTAAGAACAGTGTGAATGTGATGACAGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GCCATCTGTCATCACATTCACACTGTTCTTAGTATAGAAATGAAATTGGGGACACCTCTTCCTGGCACTTaGTCAGTACTTTCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AICHHIHTVLSIEMKLGTPLPGT*SVLSVE
Trigger: CTCCACCGAAAGTACTGACCAAGTGCCAGGAAGAGG...TGTCCCCAATTTCATTTCTATACTAAGAACAGTGTGAATGTGATGACAGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp CTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACAGAAAGGATTATGGGTaGAAAACATTGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LAALLSAVPTWFVLSKGDRKDYG*KTLALP
Trigger: AGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCT...GTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
3UTR CAA 72 bp GTTGCTCTAGAACAGAACTACAGAGTAGTGTCCTCATaGGGCCTTGTTGACCCACAGCAAGACTTTAAACTT +
Preference number: 4 (lower is better)
Translates to: VALEQNYRVVSS*GLVDPQQDFKL
Trigger: AAGTTTAAAGTCTTGCTGTGGGTCAACAAGGCCCAATGAGGACACTACTCTGTAGTTCTGTTCTAGAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp TTCGTGTGTGTTAAACATGTAATCAAGTATGTCTGTGTCCAAAGACTACAAGCCAGTGCAGAAAAGGAATaGATGGCTGGAGGTGTCGGA +
Preference number: 4 (lower is better)
Translates to: FVCVKHVIKYVCVQRLQASAEKE*MAGGVG
Trigger: TCCGACACCTCCAGCCATGCATTCCTTTTCTGCACT...GGCTTGTAGTCTTTGGACACAGACATACTTGATTACATGTTTAACACACACGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR GCA 90 bp TTCGTGTGTGTTAAACATGTAATCAAGTATGTCTGTGTCCAAAGACTACAAGCCGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: FVCVKHVIKYVCVQRLQAGPLSC*HTWWHS
Trigger: AGAATGCCACCAAGTATGGCAACATGACAGAGGACC...GGCTTGTAGTCTTTGGACACAGACATACTTGATTACATGTTTAACACACACGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR TCA 90 bp GCCATCTGTCATCACATTCACACTGTTCTTAGTATAGAAATGAAATTGGGGACAAAGGATGGTCATGGTTaGTTTCCTGTTGCCAGAGTA +
Preference number: 4 (lower is better)
Translates to: AICHHIHTVLSIEMKLGTKDGHG*FPVARV
Trigger: TACTCTGGCAACAGGAAATCAACCATGACCATCCTT...TGTCCCCAATTTCATTTCTATACTAAGAACAGTGTGAATGTGATGACAGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CCA 90 bp GCCATCTGTCATCACATTCACACTGTTCTTAGTATAGAAATGAAATTGGGGACAGATGGAACTAAAGGATaGTCATGGTTGATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: AICHHIHTVLSIEMKLGTDGTKG*SWLISC
Trigger: ACAGGAAATCAACCATGACCATCCTTTAGTTCCATC...TGTCCCCAATTTCATTTCTATACTAAGAACAGTGTGAATGTGATGACAGATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS CCA 90 bp CCTGGGGCAGGGCTCCCATGGGCAGCGCCTGCATCAGCAGCGGGGTaGCCATGCGCATCTTGCTCACAGGCTTGGGAGGCTTGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: PGAGLPWAAPASAAG*PCASCSQAWEAWEA
Trigger: AGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGCAGGCGCTGCCCATGGGAGCCCTGCCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000522153.1
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 90 bp GCCAGGTATACAGGCCTTGGAGCTTGGCCCGGCCAGGGTCCTGGGTaGGCAGGCAGGACCACCCAGCTAGCTCCCTGCACTCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: ARYTGLGAWPGQGPG*AGRTTQLAPCTHLE
Trigger: CTCCAGGTGAGTGCAGGGAGCTAGCTGGGTGGTCCTGCCTGCCCACCCAGGACCCTGGCCGGGCCAAGCTCCAAGGCCTGTATACCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517791.1
ENST00000523813.2
ENST00000523836.6
CDS-3UTR CAA 90 bp GTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGCTCCGCGGCTGCACTaGCTCTCCGGGGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: VWGWQDVEDRLCCSHMGTAPRLH*LSGAPG
Trigger: CCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAGC...AGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000523208.6
CDS-3UTR CAA 90 bp GACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCCATAGCAGCTCCGCGGCTGCACTaGCTCTCCGGGGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: DLRAVGEDTPAVADAPIAAPRLH*LSGAPG
Trigger: CCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAGC...TGCTATGGGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CAA 90 bp GCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGAACCGCGGCTTCTGGTGTaGGGGACCTCCGTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: AVMVPAASGVGDLRAVGEPRLLV*GTSVPL
Trigger: CAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGG...TTCCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS GCA 90 bp GCAGGGCTCCCATGGGCAGCGCCTGCATCAGCAGCGGGGTGGCCATaGGCATCTTGCTCACAGGCTTGGGAGGCTTGGGAAGCTTCATGC +
Preference number: 5 (lower is better)
Translates to: AGLPWAAPASAAGWP*ASCSQAWEAWEASC
Trigger: GCATGAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGCAGGCGCTGCCCATGGGAGCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000522153.1
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS GCA 90 bp CATGGGCTCTCCGGGGCCCCAGGGCGCCGGCCCAGCATGGGCAGTTaGTCATTGTTGGAGATAAGGTCGCGCTGGTCATCCATGACTGGC +
Preference number: 5 (lower is better)
Translates to: HGLSGAPGRRPSMGS*SLLEIRSRWSSMTG
Trigger: GCCAGTCATGGATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGGGGCCCCGGAGAGCCCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CCA 90 bp CCCGGCCTCAGCAGCTTCAGGAGAGCCCCGAGGGTCCAGAAGCCCTaGCACGCTAAAGCTCCCACTCCCTGTACCTTTCGGTGGAGCGTC +
Preference number: 5 (lower is better)
Translates to: PGLSSFRRAPRVQKP*HAKAPTPCTFRWSV
Trigger: GACGCTCCACCGAAAGGTACAGGGAGTGGGAGCTTTAGCGTGCCAGGGCTTCTGGACCCTCGGGGCTCTCCTGAAGCTGCTGAGGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517752.5
ENST00000524315.6
CDS CCA 90 bp ATGAGCCAGGTATACAGGCCTTGGAGCTTGGCCCGGCCAGGGTCCTaGGTGGGCAGGCAGGACCACCCAGCTAGCTCCCTGCACTCACCT +
Preference number: 5 (lower is better)
Translates to: MSQVYRPWSLARPGS*VGRQDHPASSLHSP
Trigger: AGGTGAGTGCAGGGAGCTAGCTGGGTGGTCCTGCCTGCCCACCCAGGACCCTGGCCGGGCCAAGCTCCAAGGCCTGTATACCTGGCTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517791.1
ENST00000523813.2
ENST00000523836.6
CDS-3UTR CAA 90 bp CTTAAGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTGGCGGGTACACCTTGCTCCGCGGCTGCACTaGCTCTCCGGGGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LKVSQVLREAPLQWRVHLAPRLH*LSGAPG
Trigger: CCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAGC...AAGGTGTACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCTTAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS GCA 90 bp CACTTGCTCTCCGGGGCCCCAGGGCGCCGGCCCAGCATGGGCAGTTaGTCATTGTTGGAGATAAGGTCGCGCTGGTCATCCATGACTGGC +
Preference number: 5 (lower is better)
Translates to: HLLSGAPGRRPSMGS*SLLEIRSRWSSMTG
Trigger: GCCAGTCATGGATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGGGGCCCCGGAGAGCAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 90 bp AGTAGGCGGTGGTGGCCTGGCCAGCGAGGAGCAGAGTCACCAGGATaGAAAAGCCTGTGTACAGGGCTCCGCGGCTGCACTTGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: SRRWWPGQRGAESPG*KSLCTGLRGCTCSP
Trigger: CGGAGAGCAAGTGCAGCCGCGGAGCCCTGTACACAGGCTTTTCCATCCTGGTGACTCTGCTCCTCGCTGGCCAGGCCACCACCGCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS-3UTR CAA 90 bp GCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGGGGACCTCCGTGCCGTaGGGGAAGACACACCAGCAG +
Preference number: 5 (lower is better)
Translates to: ATSWDLTPLLTDGDWAAGGTSVP*GKTHQQ
Trigger: CTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCC...CCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS GCA 90 bp GGGGTGCACGCACGCTTGGGAAGCTTCATGCGCAGGTTCTCCAGCTaGAGGTTCTGGGAGGTGACTGTCAGTTTGTCCAGCCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GVHARLGSFMRRFSS*RFWEVTVSLSSRPC
Trigger: GCAGGGCCGGCTGGACAAACTGACAGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGCGTGCGTGCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517791.1
CDS CCA 90 bp GTTTGTCCAGCCGGCCCTGCTGCTGGTACAGGAAGTAGGCGGTGGTaGCCTGGCCAGCGAGGAGCAGAGTCACCAGGATGGAAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: VCPAGPAAGTGSRRW*PGQRGAESPGWKSL
Trigger: CAGGCTTTTCCATCCTGGTGACTCTGCTCCTCGCTGGCCAGGCCACCACCGCCTACTTCCTGTACCAGCAGCAGGGCCGGCTGGACAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS-3UTR CAA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCGAGGTGACTGTCAGTTaGTCCAGCCGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAEVTVS*SSRPCC
Trigger: GCAGCAGGGCCGGCTGGACAAACTGACAGTCACCTC...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp TGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCTCCGAGGTGACTGTCAGTTaGTCCAGCCGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CWGPPCRWGRHTSSSRCSEVTVS*SSRPCC
Trigger: GCAGCAGGGCCGGCTGGACAAACTGACAGTCACCTC...GGAGCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CAA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCGTGGCCATGCGCATCTaGCTCACAGGCTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAVAMRI*LTGLGG
Trigger: GCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCAC...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp TGGTGTTGGGGACCTCCGTGCCGTTGGGGAAGACACACCAGCAGTAGCCGATGCGTGGCCATGCGCATCTaGCTCACAGGCTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: WCWGPPCRWGRHTSSSRCVAMRI*LTGLGG
Trigger: GCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCAC...GCATCGGCTACTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCCCAACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CAA 90 bp GCTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTGGGCCCAGATCCTGCTaGGTCACACCCAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: AGGERTVSMSSLGSGCRVGPRSC*VTPSPE
Trigger: TTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCCC...AACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CAGAAAAGGAATGCATGGCTGGAGGTGTCGGAGACCCAGGTTGGCATCCAGCTGCATCCAGCTGCACCCTaGACTCGGGGCCCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: QKRNAWLEVSETQVGIQLHPAAP*TRGPGP
Trigger: TGGCCCCGGGCCCCGAGTCAAGGGTGCAGCTGGATG...CAGCTGGATGCCAACCTGGGTCTCCGACACCTCCAGCCATGCATTCCTTTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp CTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGTCCAATTGCTCCCCATaGTGGGCCCAGAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: LQLWCPRLLVLGTSVPLGSNCSP*WAQSLA
Trigger: TGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGA...CCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CCA 90 bp TCAGTTTGTCCAGCCGGCCCTGCTGCTGGTACAGGAAGTAGGCGGTaGTGGCCTGGCCAGCGAGGAGCAGAGTCACCAGGATGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SVCPAGPAAGTGSRR*WPGQRGAESPGWKS
Trigger: GCTTTTCCATCCTGGTGACTCTGCTCCTCGCTGGCCAGGCCACCACCGCCTACTTCCTGTACCAGCAGCAGGGCCGGCTGGACAAACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 90 bp CTGGGTGCAGGGATGCGGGTCTCTGAGTTGAGGGATGGTGGGAGGTaGGGGGTATCAGGATGTAGGGGTGCACGCACGCTTGGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: LGAGMRVSELRDGGR*GVSGCRGARTLGKL
Trigger: AAGCTTCCCAAGCGTGCGTGCACCCCTACATCCTGATACCCCCCACCTCCCACCATCCCTCAACTCAGAGACCCGCATCCCTGCACCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517791.1
CDS-3UTR CAA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGGCTCCGCGGCTGCACTaGCTCTCCGGGGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGAPRLH*LSGAPG
Trigger: CCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAGC...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp CTGTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGAGGGCCCAGATCCTGCTaGGTCACACCCAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LCGAGRMLKTASAALTWGGPRSC*VTPSPE
Trigger: TTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCCC...TCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp CTGTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGAGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LCGAGRMLKTASAALTWGGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...TCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp CTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGGGACCTCCGTGCCGTTGGGGACCTCTTCCTGGCACTaGGTCAGTACTGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LQLWCPRLLVLGTSVPLGTSSWH*VSTGAG
Trigger: ACCTGCTCCAGTACTGACCAAGTGCCAGGAAGAGGT...CCCCAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGGGCACCATAACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS GCA 90 bp ACAGGCTTGGGAGGCTTGGGAAGCTTCATGCGCAGGTTCTCCAGCTaGAGGTTCTGGGAGGTGACTGTCAGTTTGTCCAGCCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: TGLGGLGSFMRRFSS*RFWEVTVSLSSRPC
Trigger: GCAGGGCCGGCTGGACAAACTGACAGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000522153.1
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 90 bp GCACGCTTGGGAAGCTTCATGCGCAGGTTCTCCAGCTGCAGGTTCTaGGAGGTGACTGTCAGTTTGTCCAGCCGGCCCTGCTGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: ARLGSFMRRFSSCRF*EVTVSLSSRPCCWY
Trigger: GTACCAGCAGCAGGGCCGGCTGGACAAACTGACAGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517791.1
CDS CCA 90 bp TGGGGCTTGGGAAGCTTCATGCGCAGGTTCTCCAGCTGCAGGTTCTaGGAGGTGACTGTCAGTTTGTCCAGCCGGCCCTGCTGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: WGLGSFMRRFSSCRF*EVTVSLSSRPCCWY
Trigger: GTACCAGCAGCAGGGCCGGCTGGACAAACTGACAGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CAA 90 bp GTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTGGCGGGTACACCTTCAGGGGAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: VSQVLREAPLQWRVHLQGSVSGL*LQGVPA
Trigger: AGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCT...CCCCTGAAGGTGTACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CAA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGGGGACCTCCGTGCCGTaGGGGAAGACACACCAGCAG +
Preference number: 5 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGGTSVP*GKTHQQ
Trigger: CTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCC...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CAA 90 bp GGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCTTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTG +
Preference number: 5 (lower is better)
Translates to: GWQDVEDRLCCSHMGTGPLGSRA*LHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAA...GGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000518797.6
CDS GCA 90 bp CTGCACTCACCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LHSPGAGASHGPLSC*HTWWHSAWAPGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGGTGAGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517791.1
ENST00000523813.2
ENST00000523836.6
CDS GCA 90 bp CATTCTGCATGGGGCTTGGGAAGCTTCATGCGCAGGTTCTCCAGCTaGAGGTTCTGGGAGGTGACTGTCAGTTTGTCCAGCCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: HSAWGLGSFMRRFSS*RFWEVTVSLSSRPC
Trigger: GCAGGGCCGGCTGGACAAACTGACAGTCACCTCCCAGAACCTGCAGCTGGAGAACCTGCGCATGAAGCTTCCCAAGCCCCATGCAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CAA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCATCTTGCTCACAGGCTaGGGAGGCTTGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAILLTG*GGLGSF
Trigger: GAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGAT...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp ATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCGTGGCCATGCGCATCTaGCTCACAGGCTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: MSGTGICLAFGHFLGPHAVAMRI*LTGLGG
Trigger: GCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCAC...GGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp AGCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTGGGACCTCCGTGCCGTaGGGGAAGACACACCAGCAG +
Preference number: 5 (lower is better)
Translates to: SSSRCSHSTGVADSCRSRGTSVP*GKTHQQ
Trigger: CTGCTGGTGTGTCTTCCCCAACGGCACGGAGGTCCC...ACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp GCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGGGCCCAGATCCTGCTaGGTCACACCCAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: AVADAPIALEWQIVAVLVGPRSC*VTPSPE
Trigger: TTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCCC...GACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS GCA 90 bp GGTCAGCATTCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: GQHSGAGASHGPLSC*HTWWHSAWAPGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGAATGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000517752.5
ENST00000524315.6
CDS GCA 90 bp TCCAGTGACTCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: SSDSGAGASHGPLSC*HTWWHSAWAPGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGAGTCACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377795.7
CDS GCA 90 bp TTGCACAGTGCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCTCTCCGGGGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LHSAGAGASHGPLSC*HTWWHSAWALRGPR
Trigger: CCTGGGGCCCCGGAGAGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGCACTGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CCA 90 bp GCAGCAGCTGTGACCTTGGCGCCCTCACTGGATTGCGGGCAGCACTaGGGCAAGGTCATTACAAGGATTCCTTTCTGCAGTGTTTCGGGC +
Preference number: 5 (lower is better)
Translates to: AAAVTLAPSLDCGQH*GKVITRIPFCSVSG
Trigger: GCCCGAAACACTGCAGAAAGGAATCCTTGTAATGACCTTGCCCCAGTGCTGCCCGCAATCCAGTGAGGGCGCCAAGGTCACAGCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS-3UTR CAA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCGGCAGTTGCTCATTGTaGGAGATAAGGTCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSGSCSL*EIRSRW
Trigger: CCAGCGCGACCTTATCTCCAACAATGAGCAACTGCC...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCATGGGCAGTTGCTCATaGTTGGAGATAAGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAMGSCS*LEIRSR
Trigger: GCGCGACCTTATCTCCAACAATGAGCAACTGCCCAT...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGAGGTGACTGTCAGTTaGTCCAGCCGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGLSCPRVTKEPGTRVSWEVTVS*SSRPCC
Trigger: GCAGCAGGGCCGGCTGGACAAACTGACAGTCACCTC...CCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp GTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCAACAGGCTTGGGAGGCTaGGGAAGCTTCATGCGCAGG +
Preference number: 5 (lower is better)
Translates to: VADAPIALEWQIVAVLVATGLGG*GSFMRR
Trigger: CCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTGT...TGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CAA 90 bp AGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGAGGCCGTTCTCGTCGCACTaGGGCCTGAATGAACCCGGG +
Preference number: 5 (lower is better)
Translates to: SLQVNRLEKPRPKAGGERPFSSH*GLNEPG
Trigger: CCCGGGTTCATTCAGGCCCAAGTGCGACGAGAACGG...CCTCTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CAA 90 bp GGAAGAGAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGCCGCGGCTTCTGGTGTaGGGGACCTCCGTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: GREWLSLQVNRLEKPRPKPRLLV*GTSVPL
Trigger: CAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGG...CTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTCTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CAA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCTTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTG +
Preference number: 5 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSLGSRA*LHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAA...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp ATGGCTTCAGGAGCTGGGTCCAATTGCTCCCCATTGTGGGCCCAGAGCCTTGCACTGCCCCCAGCTAGGTaGAGTCCTCTGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: MASGAGSNCSPLWAQSLALPPAR*SPLPLS
Trigger: AGAAAGAGGCAGAGGACTCAACCTAGCTGGGGGCAG...TGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS GCA 90 bp AAGGCTCTCTTGGCAGCAGCTGTGACCTTGGCGCCCTCACTGGATTaGGGGCAGCACTGGGGCAAGGTCATTACAAGGATTCCTTTCTGC +
Preference number: 5 (lower is better)
Translates to: KALLAAAVTLAPSLD*GQHWGKVITRIPFC
Trigger: GCAGAAAGGAATCCTTGTAATGACCTTGCCCCAGTGCTGCCCGCAATCCAGTGAGGGCGCCAAGGTCACAGCTGCTGCCAAGAGAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS GCA 90 bp TTGGTCAGTACTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: LVSTGAGASHGPLSC*HTWWHSAWAPGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGTACTGACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS CCA 90 bp GGTGTTCTTAAGGTGTCTCAGGTTCTCCGGGAAGCTCCCCTTCAGTaGCGGGTACACCTTCAGGGGGTCAGCATTCTGGAGCAGGTGCAT +
Preference number: 5 (lower is better)
Translates to: GVLKVSQVLREAPLQ*RVHLQGVSILEQVH
Trigger: ATGCACCTGCTCCAGAATGCTGACCCCCTGAAGGTGTACCCGCCACTGAAGGGGAGCTTCCCGGAGAACCTGAGACACCTTAAGAACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000517752.5
ENST00000522246.5
ENST00000524315.6
CDS CCA 90 bp CAGAAGCCCTGGCACGCTAAAGCTCCCACTCCCTGTACCTTTCGGTaGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTC +
Preference number: 5 (lower is better)
Translates to: QKPWHAKAPTPCTFR*SVSGLLLQGVPAHF
Trigger: GAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGGAGTGGGAGCTTTAGCGTGCCAGGGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517752.5
ENST00000524315.6
CDS-3UTR CAA 90 bp CTGTGTGGGGCTGGCAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGAATGGGCAGTTGCTCATaGTTGGAGATAAGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: LCGAGRMLKTASAALTWGMGSCS*LEIRSR
Trigger: GCGCGACCTTATCTCCAACAATGAGCAACTGCCCAT...TCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCCACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377795.7
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp GACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGAGAGGTGACTGTCAGTTaGTCCAGCCGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: DRWRLGSRALLHCYLLFREVTVS*SSRPCC
Trigger: GCAGCAGGGCCGGCTGGACAAACTGACAGTCACCTC...TCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp AGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGATCTTGCTCACAGGCTaGGGAGGCTTGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SPEDGSSSSSDSLQLWCPILLTG*GGLGSF
Trigger: GAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGAT...CGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS-3UTR CAA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTGTGGCCATGCGCATCTaGCTCACAGGCTTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVVAMRI*LTGLGG
Trigger: GCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCAC...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp CACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: HFLGPHAPVDRWRLGSRAWSSVM*PYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCA...GGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLESVSGL*LQGVPA
Trigger: AGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCT...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR CAA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CAGGATGTTGAAGACCGCCTCTGCTGCTCTCACATGGGGACTGGGCCCAGATCCCAGGGCCTTGCTGCATaGTTATCTGCTGTTCCGACT +
Preference number: 5 (lower is better)
Translates to: QDVEDRLCCSHMGTGPRSQGLAA*LSAVPT
Trigger: AGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG...GGATCTGGGCCCAGTCCCCATGTGAGAGCAGCAGAGGCGGTCTTCAACATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTTTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLLGSRA*LHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAA...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp AGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RGQSACPAWGLGVGLSLLVDRWR*GSRALL
Trigger: CAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAAC...GAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTGTCGGAGACCCAGGTaGGCATCCAGCTGCACCCTT +
Preference number: 5 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVCRRPR*ASSCTL
Trigger: AAGGGTGCAGCTGGATGCCAACCTGGGTCTCCGACA...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS GCA 90 bp TTCAGGAGCTGGGTCCAATTGCTCCCCATTGTGGGCCCAGAGCCTTaGACAGTGCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTT +
Preference number: 5 (lower is better)
Translates to: FRSWVQLLPIVGPEP*TVLEQVHHMVLCHV
Trigger: AACATGACAGAGGACCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CCA 90 bp GGGTCCAATTGCTCCCCATTGTGGGCCCAGAGCCTTGCACAGTGCTaGAGCAGGTGCATCACATGGTCCTCTGTCATGTTGCCATACTTG +
Preference number: 5 (lower is better)
Translates to: GSNCSPLWAQSLAQC*SRCITWSSVMLPYL
Trigger: CAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CCA 90 bp CTGAATGAACCCGGGTGGACAGCAGGGATGTGGCTGACCTCTTCCTaGCACTTGGTCAGTACTGAAGCGACAGGCATGATGAGGACACAG +
Preference number: 5 (lower is better)
Translates to: LNEPGWTAGMWLTSS*HLVSTEATGMMRTQ
Trigger: CTGTGTCCTCATCATGCCTGTCGCTTCAGTACTGACCAAGTGCCAGGAAGAGGTCAGCCACATCCCTGCTGTCCACCCGGGTTCATTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS-3UTR CAA 90 bp CTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGCTGCTGGGCAGTTGCTCATTGTaGGAGATAAGGTCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LPISSMSLGLGALCWRLLGSCSL*EIRSRW
Trigger: CCAGCGCGACCTTATCTCCAACAATGAGCAACTGCC...CAGCAGCCTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTCATGGGATGAGGTACAGGGTATGGGCAGTTGCTCATaGTTGGAGATAAGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: PRVTKEPGTRVSWDEVQGMGSCS*LEIRSR
Trigger: GCGCGACCTTATCTCCAACAATGAGCAACTGCCCAT...ACCCTGTACCTCATCCCATGAGACCCTGGTGCCTGGCTCTTTCGTCACCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp TCCCTGTACCTTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCATGGGCAGTTGCTCATaGTTGGAGATAAGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: SLYLSVERQWAFAPRSACMGSCS*LEIRSR
Trigger: GCGCGACCTTATCTCCAACAATGAGCAACTGCCCAT...GCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CAA 90 bp CCCAGCCCAGAAGACGGGTCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAG +
Preference number: 5 (lower is better)
Translates to: PSPEDGSSSSSDSLQLWCAQHGQ*LIVGDK
Trigger: CTTATCTCCAACAATGAGCAACTGCCCATGCTGGGC...GCACCATAACTGCAGTGAGTCACTGGAACTGGAGGACCCGTCTTCTGGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp CAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGAGGTGACTGTCAGTTaGTCCAGCCGGCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: QWAFAPRSACSFQTGANGEVTVS*SSRPCC
Trigger: GCAGCAGGGCCGGCTGGACAAACTGACAGTCACCTC...ACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CAA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLVMLPY*VAFCMG
Trigger: GCCCATGCAGAATGCCACCAAGTATGGCAACATGAC...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCTGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: EGRGQSACPAWGLGVGLSWSSVM*PYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCA...GGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCACCGCGGCTTCTGGTGTaGGGGACCTCCGTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPPRLLV*GTSVPL
Trigger: CAACGGCACGGAGGTCCCCAACACCAGAAGCCGCGG...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CAA 90 bp CTGGAGGGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTACCGACTTGGTTTGTCTaGTCCAAGGGTGACGAAAGA +
Preference number: 5 (lower is better)
Translates to: LEGRGQSACPAWGLGVGLPTWFV*SKGDER
Trigger: TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGG...TAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCCCTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTCTCCCTCAGGGCCTTGCTGCATaGTTATCTGCTGTTCCGACT +
Preference number: 5 (lower is better)
Translates to: GQSACPAWGLGVGLSLLPQGLAA*LSAVPT
Trigger: AGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG...AGGGAGAAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGTTGGGCAGCAGGGCCTaGCTGCATTGTTATCTGCTG +
Preference number: 5 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGLGSRA*LHCYLL
Trigger: CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAA...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp ATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ICLAFGHFLGPHAPVDRWVDRWR*GSRALL
Trigger: CAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAAC...CCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp TGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: WLSLQVNRLEKPRPKAGGVDRWR*GSRALL
Trigger: CAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAAC...CCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGGACCTCACGCCCCTGTaGACAGATGGAGATTGGGCA +
Preference number: 5 (lower is better)
Translates to: APVDRWRLGSRALLHCYLDLTPL*TDGDWA
Trigger: TGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTC...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS GCA 90 bp AAGCTCCCACTCCCTGTACCTTTCGGTGGAGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGC +
Preference number: 5 (lower is better)
Translates to: KLPLPVPFGGASVGF*SKECLLISNRSQWC
Trigger: GCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGGAGTGGGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517752.5
ENST00000524315.6
CDS GCA 90 bp TTCCTTTCTGCAGTGTTTCGGGCAGGTTCTACCCCAGGCACCCTGTaGTGTACCATCCTCTATGAGAGAGGTCACCTGTACCCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: FLSAVFRAGSTPGTL*CTILYERGHLYPVV
Trigger: CACCACAGGGTACAGGTGACCTCTCTCATAGAGGATGGTACAGCACAGGGTGCCTGGGGTAGAACCTGCCCGAAACACTGCAGAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS-3UTR CAA 90 bp ATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGGGCAGTTGCTCATTGTaGGAGATAAGGTCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: ICLAFGHFLGPHAPVDRWGSCSL*EIRSRW
Trigger: CCAGCGCGACCTTATCTCCAACAATGAGCAACTGCC...CCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGATGGGCAGTTGCTCATaGTTGGAGATAAGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGMGSCS*LEIRSR
Trigger: GCGCGACCTTATCTCCAACAATGAGCAACTGCCCAT...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTATGGGCAGTTGCTCATaGTTGGAGATAAGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: ADAPIALEWQIVAVLVALMGSCS*LEIRSR
Trigger: GCGCGACCTTATCTCCAACAATGAGCAACTGCCCAT...AAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAG +
Preference number: 5 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLEAQHGQ*LIVGDK
Trigger: CTTATCTCCAACAATGAGCAACTGCCCATGCTGGGC...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp TCCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAG +
Preference number: 5 (lower is better)
Translates to: SSSSSDSLQLWCPRLLVLAQHGQ*LIVGDK
Trigger: CTTATCTCCAACAATGAGCAACTGCCCATGCTGGGC...CAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp AGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGAGGATCTTGCTCACAGGCTaGGGAGGCTTGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SLQVNRLEKPRPKAGGERILLTG*GGLGSF
Trigger: GAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGAT...CCTCTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp CCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCGCACTTGGGCCTGAAGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: PIALEWQIVAVLVALGPEVMLPY*VAFCMG
Trigger: GCCCATGCAGAATGCCACCAAGTATGGCAACATGAC...TTCAGGCCCAAGTGCGACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp CCTGTACCTTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTGCTCTGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: PVPFGGASVGFCSKECLLWSSVM*PYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCA...GAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CAA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGGGGCCCAGATCCTGCTaGGTCACACCCAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWGPRSC*VTPSPE
Trigger: TTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCCC...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CCTCCAGTTCCAGTGACTCACTGCAGTTATGGTGCCCGCGGCTTCTGGTGTTGGCCGACTTGGTTTGTCTaGTCCAAGGGTGACGAAAGA +
Preference number: 5 (lower is better)
Translates to: PPVPVTHCSYGARGFWCWPTWFV*SKGDER
Trigger: TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGG...CCAACACCAGAAGCCGCGGGCACCATAACTGCAGTGAGTCACTGGAACTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CAA 90 bp ATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGGACCTCACGCCCCTGTaGACAGATGGAGATTGGGCA +
Preference number: 5 (lower is better)
Translates to: MEIGQQGLAALLSAVPTWDLTPL*TDGDWA
Trigger: TGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTC...CCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGGACCTCACGCCCCTGTaGACAGATGGAGATTGGGCA +
Preference number: 5 (lower is better)
Translates to: PVDRWRLGSRALLHCYLLDLTPL*TDGDWA
Trigger: TGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTC...CAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GGCTGCTGTGATGTCAGGAACGGGGATCTGTCTAGCTTTTGGCCACTTCCTGGGTCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: GCCDVRNGDLSSFWPLPGSWSLV*EAAVMS
Trigger: TGACATCACAGCAGCCTCCAACACAAGGCTCCAAGA...CCCAGGAAGTGGCCAAAAGCTAGACAGATCCCCGTTCCTGACATCACAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GGGAGAGGACAGTCAGCATGTCCAGCCTGGGGTCTGGGTGTAGGGTTATCCCTTTATGGGTGGAAAACATaGGCTCTTCCTTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: GRGQSACPAWGLGVGLSLYGWKT*ALPWGV
Trigger: CACTCCCCAAGGAAGAGCCAATGTTTTCCACCCATA...AAGGGATAACCCTACACCCAGACCCCAGGCTGGACATGCTGACTGTCCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTGTGGGCCCAGAGCCTaGCACAGTGCTGGAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LLISNRSQWCIQLSKTFQCGPRA*HSAGAG
Trigger: ACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACA...CTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CAA 90 bp CCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTCTTGGAGCCTTGTGTTGGAGTACGAGACTGCAGCGTaGCGAGTCGAGTTCCAGATT +
Preference number: 5 (lower is better)
Translates to: PVPSHLVHEPRSWSLVLEYETAA*RVEFQI
Trigger: AATCTGGAACTCGACTCGCAACGCTGCAGTCTCGTA...CTCCAACACAAGGCTCCAAGACCTAGGCTCATGGACGAGATGGGAAGGCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS TCA 90 bp TCATTGTTGGAGATAAGGTCGCGCTGGTCATCCATGACTGGCTTCTaGTCTTCCCGACAGCTCCTGCTTCTCCTCCTGTGCATCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SLLEIRSRWSSMTGF*SSRQLLLLLLCIWD
Trigger: GTCCCAGATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCGACCTTATCTCCAACAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377795.7
ENST00000517791.1
ENST00000523813.2
ENST00000524315.6
CDS GCA 90 bp TCCTCCAGTTCCAGTGACTCTTTCGGTGGAGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGC +
Preference number: 5 (lower is better)
Translates to: SSSSSDSFGGASVGF*SKECLLISNRSQWC
Trigger: GCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGAGTCACTGGAACTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353334.11
ENST00000523836.6
CDS-3UTR CAA 90 bp ATCTGTCTAGCTTTTGGCCACTTCCTGGGACCTCACGCCCCTGTTGACAGATGGGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAG +
Preference number: 5 (lower is better)
Translates to: ICLAFGHFLGPHAPVDRWAQHGQ*LIVGDK
Trigger: CTTATCTCCAACAATGAGCAACTGCCCATGCTGGGC...CCATCTGTCAACAGGGGCGTGAGGTCCCAGGAAGTGGCCAAAAGCTAGACAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GCCATCTGTCATCACATTCACACTGTTCTTAGTATAGAAATGAAATTGGGGACAGCTCCGCGGCTGCACTaGCTCTCCGGGGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: AICHHIHTVLSIEMKLGTAPRLH*LSGAPG
Trigger: CCCTGGGGCCCCGGAGAGCAAGTGCAGCCGCGGAGC...TGTCCCCAATTTCATTTCTATACTAAGAACAGTGTGAATGTGATGACAGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVVMLPY*VAFCMG
Trigger: GCCCATGCAGAATGCCACCAAGTATGGCAACATGAC...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp AGCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: SSSRCSHSTGVADSCRSRVMLPY*VAFCMG
Trigger: GCCCATGCAGAATGCCACCAAGTATGGCAACATGAC...ACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp GCAGTAGCCGATGCTCCCATAGCACTGGAGTGGCAGATAGTTGCCGTTCTCGTCTGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: AVADAPIALEWQIVAVLVWSSVM*PYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCA...GACGAGAACGGCAACTATCTGCCACTCCAGTGCTATGGGAGCATCGGCTACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000523208.6
CDS-3UTR CAA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGACCTCTTCCTGGCACTaGGTCAGTACTTTCGGTGGA +
Preference number: 5 (lower is better)
Translates to: APVDRWRLGSRALLHCYLTSSWH*VSTFGG
Trigger: TCCACCGAAAGTACTGACCAAGTGCCAGGAAGAGGT...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CAA 90 bp TGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTCCGTTCTCGTCGCACTaGGGCCTGAATGAACCCGGG +
Preference number: 5 (lower is better)
Translates to: CSFQTGANGASSSQRPSSPFSSH*GLNEPG
Trigger: CCCGGGTTCATTCAGGCCCAAGTGCGACGAGAACGG...ACTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CAA 90 bp TGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: CYLLFRLGLSCPRVTKEPGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...TGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGELFRLG*SCPRVT
Trigger: CGTCACCCTTGGACAAGACAAACCAAGTCGGAACAG...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GCCCCTGTTGACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: APVDRWRLGSRALLHCYLLFRLG*SCPRVT
Trigger: CGTCACCCTTGGACAAGACAAACCAAGTCGGAACAG...CAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAACAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCCAGGGCCTTGCTGCATaGTTATCTGCTGTTCCGACT +
Preference number: 5 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVQGLAA*LSAVPT
Trigger: AGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGGAGTCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: LSLQVNRLEKPRPKAGGESWSLV*EAAVMS
Trigger: TGACATCACAGCAGCCTCCAACACAAGGCTCCAAGA...CTCCCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp AGGGTAGTCCAGCTGTTCAGCTACGAGACTGCAGCGTTGCGAGTCGAGTTCCAGTATGGGTGGAAAACATaGGCTCTTCCTTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RVVQLFSYETAALRVEFQYGWKT*ALPWGV
Trigger: CACTCCCCAAGGAAGAGCCAATGTTTTCCACCCATA...CTGGAACTCGACTCGCAACGCTGCAGTCTCGTAGCTGAACAGCTGGACTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CAA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCTGTCCTCATTGGGCCTaGTTGACCCACAGCAAGACT +
Preference number: 5 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVCPHWA*LTHSKT
Trigger: AGTCTTGCTGTGGGTCAACAAGGCCCAATGAGGACA...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp TTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCAGGCACCAGGGTCGTAGCCCACGTTCCCTaGGTCTTCCATTCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: FRLGLSCPRVTKEPGTRVVAHVP*VFHSEE
Trigger: TTCCTCAGAATGGAAGACCAAGGGAACGTGGGCTAC...GACCCTGGTGCCTGGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS TCA 90 bp AACCAAGAAGGAACAGACAGGAGAGAGAGAGAAGTGAGAAAGAAGTaGGAGCTGAGAGGATGGGAGATTCCGCGGTGCTGGGACCAGGGA +
Preference number: 5 (lower is better)
Translates to: NQEGTDRREREVRKK*ELRGWEIPRCWDQG
Trigger: TCCCTGGTCCCAGCACCGCGGAATCTCCCATCCTCTCAGCTCTCACTTCTTTCTCACTTCTCTCTCTCTCCTGTCTGTTCCTTCTTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517752.5
ENST00000524315.6
CDS GCA 90 bp GGTCAGCATTCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGGCTTGGGAAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: GQHSGAGASHGPLSC*HTWWHSAWGLGSFM
Trigger: CATGAAGCTTCCCAAGCCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGAATGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS CCA 90 bp CAGTTGCTCATTGTTGGAGATAAGGTCGCGCTGGTCATCCATGACTaGCTTCTGATCTTCCCGACAGCTCCTGCTTCTCCTCCTGTGCAT +
Preference number: 5 (lower is better)
Translates to: QLLIVGDKVALVIHD*LLIFPTAPASPPVH
Trigger: ATGCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517791.1
ENST00000518797.6
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS-3UTR CAA 90 bp TTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAGCCACAGGCTTGGGAGGCTaGGGAAGCTTCATGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LLSAVPTWFVLSKGDERATGLGG*GSFMRR
Trigger: CCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTGT...GGCTCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp GAGTGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGC +
Preference number: 5 (lower is better)
Translates to: EWLSLQVNRLEKPRPKAGVMLPY*VAFCMG
Trigger: GCCCATGCAGAATGCCACCAAGTATGGCAACATGAC...TCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp TGGCTCAGCCTGCAGGTAAATAGGCTAGAAAAGCCAAGGCCAAAGGCTGGAGGGTGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: WLSLQVNRLEKPRPKAGGWSSVM*PYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCA...CCCTCCAGCCTTTGGCCTTGGCTTTTCTAGCCTATTTACCTGCAGGCTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGAACCTCTTCCTGGCACTaGGTCAGTACTTTCGGTGGA +
Preference number: 5 (lower is better)
Translates to: DRWRLGSRALLHCYLLFRTSSWH*VSTFGG
Trigger: TCCACCGAAAGTACTGACCAAGTGCCAGGAAGAGGT...TCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000009530.12
ENST00000518797.6
CDS-3UTR CAA 90 bp CTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGGGGCTGGCAGGATGTaGAAGACCGCCTCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LHCYLLFRLGLSCPRVTKGAGRM*KTASAA
Trigger: AGCAGCAGAGGCGGTCTTCAACATCCTGCCAGCCCC...TTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp ATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: MEIGQQGLAALLSAVPTWLFRLG*SCPRVT
Trigger: CGTCACCCTTGGACAAGACAAACCAAGTCGGAACAG...CCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCCTGTTCCGACTTGGTTaGTCTTGTCCAAGGGTGACG +
Preference number: 5 (lower is better)
Translates to: LQGVPAHFKQEPMVHPALLFRLG*SCPRVT
Trigger: CGTCACCCTTGGACAAGACAAACCAAGTCGGAACAG...GAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CAA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVSWSLV*EAAVMS
Trigger: TGACATCACAGCAGCCTCCAACACAAGGCTCCAAGA...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GCTGCTCCAGCCTGGAAATGCAGAAGCCCACTTCCCTGGGCCCAGAGCCATGTGAGAGCCTATTTCTTTTaGGAAGTAGAGTGTTCGTGT +
Preference number: 5 (lower is better)
Translates to: AAPAWKCRSPLPWAQSHVRAYFF*EVECSC
Trigger: ACACGAACACTCTACTTCCAAAAAGAAATAGGCTCT...CACATGGCTCTGGGCCCAGGGAAGTGGGCTTCTGCATTTCCAGGCTGGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS GCA 90 bp ACTCTTTCGGTGGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCTaGTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: TLSVERQWAFAPRSA*SFQTGANGASSSQR
Trigger: TCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353334.11
ENST00000523836.6
CDS-3UTR CAA 90 bp CTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAACAGGCTTGGGAGGCTaGGGAAGCTTCATGCGCAGG +
Preference number: 5 (lower is better)
Translates to: LHCYLLFRLGLSCPRVTKTGLGG*GSFMRR
Trigger: CCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTGT...TTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp GCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAACAGGCTTGGGAGGCTaGGGAAGCTTCATGCGCAGG +
Preference number: 5 (lower is better)
Translates to: ALLSAVPTWFVLSKGDERTGLGG*GSFMRR
Trigger: CCTGCGCATGAAGCTTCCCAAGCCTCCCAAGCCTGT...TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp ACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: TDGDWAAGPCCIVICCSDWSSVM*PYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCA...GTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LAALLSAVPTWFVLSKGDSVSGL*LQGVPA
Trigger: AGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCT...GTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000518797.6
CDS-3UTR CAA 90 bp TGCATCCAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: CIQLSKTFQSMVSMVFLRSVSGL*LQGVPA
Trigger: AGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCT...CCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTGGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CAA 90 bp CCAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTGTTGACAGATGGAGATaGGGCAGCAGGGCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PALKDLPVYGLHGVLKVSVDRWR*GSRALL
Trigger: CAGCAAGGCCCTGCTGCCCAATCTCCATCTGTCAAC...AGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CAA 90 bp TTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACCTTCCAGTCTATGGGACCTCACGCCCCTGTaGACAGATGGAGATTGGGCA +
Preference number: 5 (lower is better)
Translates to: FQTGANGASSSQRPSSLWDLTPL*TDGDWA
Trigger: TGCCCAATCTCCATCTGTCAACAGGGGCGTGAGGTC...CCATAGACTGGAAGGTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS-3UTR CAA 90 bp GGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTCCTCATTGGGCCTTGTaGACCCACAGCAAGACTTTA +
Preference number: 5 (lower is better)
Translates to: GDWAAGPCCIVICCSDLVPHWAL*THSKTL
Trigger: TAAAGTCTTGCTGTGGGTCAACAAGGCCCAATGAGG...AACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGAGAGTAGTGTCCTCATaGGGCCTTGTTGACCCACAG +
Preference number: 5 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGRVVSS*GLVDPQ
Trigger: CTGTGGGTCAACAAGGCCCAATGAGGACACTACTCT...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp CTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACTGGGGCACATGTTTCTaGGAAGGGACTGTCTCGCCG +
Preference number: 5 (lower is better)
Translates to: LAALLSAVPTWFVLSKGDWGTCF*EGTVSP
Trigger: CGGCGAGACAGTCCCTTCCAAGAAACATGTGCCCCA...GTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp CCAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCATTCTGCATGGGGCTaGGGAAGCTTCATGCGCAGG +
Preference number: 5 (lower is better)
Translates to: PALKDLPVYGLHGVLKVSHSAWG*GSFMRR
Trigger: CCTGCGCATGAAGCTTCCCAAGCCCCATGCAGAATG...AGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CAA 90 bp GGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTGCATCCAGCTCTCAAAGACGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGG +
Preference number: 5 (lower is better)
Translates to: GVPAHFKQEPMVHPALKDVMLPY*VAFCMG
Trigger: CCCCATGCAGAATGCCACCAAGTATGGCAACATGAC...GTCTTTGAGAGCTGGATGCACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS-3UTR CAA 90 bp CTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGGCAGTTGCTCATTGTaGGAGATAAGGTCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LAALLSAVPTWFVLSKGDGSCSL*EIRSRW
Trigger: CCAGCGCGACCTTATCTCCAACAATGAGCAACTGCC...GTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CAGCTCTCAAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCGGCAGTTGCTCATTGTaGGAGATAAGGTCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: QLSKTFQSMVSMVFLRCLGSCSL*EIRSRW
Trigger: CCAGCGCGACCTTATCTCCAACAATGAGCAACTGCC...GAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTTGAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CAA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAG +
Preference number: 5 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWAQHGQ*LIVGDK
Trigger: CTTATCTCCAACAATGAGCAACTGCCCATGCTGGGC...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACATCTTGCTCACAGGCTaGGGAGGCTTGGGAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LAALLSAVPTWFVLSKGDILLTG*GGLGSF
Trigger: GAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGAT...GTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
CDS-3UTR CAA 90 bp AGAGTAGTGTCCTCATTGGGCCTTGTTGACCCACAGCAAGACTTTAAACTTAAAGGGCCCAGATCCTGCTaGGTCACACCCAGCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RVVSSLGLVDPQQDFKLKGPRSC*VTPSPE
Trigger: TTCTGGGCTGGGTGTGACCAAGCAGGATCTGGGCCC...TTTAAGTTTAAAGTCTTGCTGTGGGTCAACAAGGCCCAATGAGGACACTACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGCCGACTTGGTTTGTCTaGTCCAAGGGTGACGAAAGA +
Preference number: 5 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGPTWFV*SKGDER
Trigger: TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGG...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GGGCCTTGCTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTATGGGTGGAAAACATaGGCTCTTCCTTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: GPCCIVICCSDLVCLVQGYGWKT*ALPWGV
Trigger: CACTCCCCAAGGAAGAGCCAATGTTTTCCACCCATA...CCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GACAGATGGAGATTGGGCAGCAGGGCCTTGCTGCATTGTTATCTGCTGTTCCGAAAAATCGGAAGTGAGTaGCCCCTCAAATCGAGCTCA +
Preference number: 5 (lower is better)
Translates to: DRWRLGSRALLHCYLLFRKIGSE*PLKSSS
Trigger: TGAGCTCGATTTGAGGGGCAACTCACTTCCGATTTT...TCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCCCAATCTCCATCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp GCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGACCTCTTGCCTGCATGTaGAGGCTATGGGTGACCGTG +
Preference number: 5 (lower is better)
Translates to: ALLSAVPTWFVLSKGDERPLACM*RLWVTV
Trigger: CACGGTCACCCATAGCCTCAACATGCAGGCAAGAGG...TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS-3UTR CAA 90 bp GAACTAGGGGTCGGCAGAAAGGATTATGGGTGGAAAACATTGGCTCTTCCTTGGCCGACTTGGTTTGTCTaGTCCAAGGGTGACGAAAGA +
Preference number: 5 (lower is better)
Translates to: ELGVGRKDYGWKTLALPWPTWFV*SKGDER
Trigger: TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGG...CCAAGGAAGAGCCAATGTTTTCCACCCATAATCCTTTCTGCCGACCCCTAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp GCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAAGAATCTCTGTGGGTTACTaGGGCTGCGTTCTCCCACCT +
Preference number: 5 (lower is better)
Translates to: ALLSAVPTWFVLSKGDERISVGY*GCVLPP
Trigger: AGGTGGGAGAACGCAGCCCAAGTAACCCACAGAGAT...TCTTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS TCA 90 bp CATTTAAGGGTCACCCTTGTATTCAGTAATCCAGAGAGCACATGTTaGAAGTCTGCCATGAGCCAGGTATACAGGCCTTGGAGCTTGGCC +
Preference number: 5 (lower is better)
Translates to: HLRVTLVFSNPESTC*KSAMSQVYRPWSLA
Trigger: GGCCAAGCTCCAAGGCCTGTATACCTGGCTCATGGCAGACTTTCAACATGTGCTCTCTGGATTACTGAATACAAGGGTGACCCTTAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517791.1
ENST00000523813.2
ENST00000523836.6
CDS-3UTR CAA 90 bp AAAGACCTTCCAGTCTATGGTCTCCATGGTGTTCTTAAGGTGTCTCAGGTTCTCGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAG +
Preference number: 5 (lower is better)
Translates to: KDLPVYGLHGVLKVSQVLAQHGQ*LIVGDK
Trigger: CTTATCTCCAACAATGAGCAACTGCCCATGCTGGGC...GAGAACCTGAGACACCTTAAGAACACCATGGAGACCATAGACTGGAAGGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518797.6
ENST00000522246.5
CDS-3UTR CAA 90 bp CTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAACAGGGCCTTGCTGCATaGTTATCTGCTGTTCCGACT +
Preference number: 5 (lower is better)
Translates to: LHCYLLFRLGLSCPRVTKQGLAA*LSAVPT
Trigger: AGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTG...TTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp CTGCATTGTTATCTGCTGTTCCGACTTGGTTTGTCTTGTCCAAGGGTGACGAAATCTTGGAGCCTTGTGTaGGAGGCTGCTGTGATGTCA +
Preference number: 5 (lower is better)
Translates to: LHCYLLFRLGLSCPRVTKSWSLV*EAAVMS
Trigger: TGACATCACAGCAGCCTCCAACACAAGGCTCCAAGA...TTTCGTCACCCTTGGACAAGACAAACCAAGTCGGAACAGCAGATAACAATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000518797.6
CDS-3UTR CAA 90 bp AGAGTAGTGTCCTCATTGGGCCTTGTTGACCCACAGCAAGACTTTAAACTTAAATATGGGTGGAAAACATaGGCTCTTCCTTGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RVVSSLGLVDPQQDFKLKYGWKT*ALPWGV
Trigger: CACTCCCCAAGGAAGAGCCAATGTTTTCCACCCATA...TTTAAGTTTAAAGTCTTGCTGTGGGTCAACAAGGCCCAATGAGGACACTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000009530.12
CDS CCA 72 bp CCAGCCGGCCCTGCTGCTGGTACAGGAAGTAGGCGGTaGTGGCCTGGCCAGCGAGGAGCAGAGTCACCAGGA +
Preference number: 6 (lower is better)
Translates to: PAGPAAGTGSRR*WPGQRGAESPG
Trigger: TCCTGGTGACTCTGCTCCTCGCTGGCCAGGCCACCACCGCCTACTTCCTGTACCAGCAGCAGGGCCGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 72 bp GGGCTCCCATGGGCAGCGCCTGCATCAGCAGCGGGGTaGCCATGCGCATCTTGCTCACAGGCTTGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: GLPWAAPASAAG*PCASCSQAWEA
Trigger: AGCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGCAGGCGCTGCCCATGGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000522153.1
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 72 bp GGGCTCCCATGGGCAGCGCCTGCATCAGCAGCGGGGTaGCCATGCGCATCTTGCTCACAGGCTTGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: GLPWAAPASAAG*PCASCSQAWEL
Trigger: CAGCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGCAGGCGCTGCCCATGGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517791.1
CDS GCA 72 bp TCCGGGGCCCCAGGGCGCCGGCCCAGCATGGGCAGTTaGTCATTGTTGGAGATAAGGTCGCGCTGGTCATCC +
Preference number: 6 (lower is better)
Translates to: SGAPGRRPSMGS*SLLEIRSRWSS
Trigger: GGATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGGGGCCCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000518797.6
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CAA 72 bp CTCCGGGGCCCCAGGGCGCCGGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAGGTCGCGCTGGTCATC +
Preference number: 6 (lower is better)
Translates to: LRGPRAPAQHGQ*LIVGDKVALVI
Trigger: GATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGGGGCCCCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000518797.6
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CAA 90 bp GCATGGGCTCTCCGGGGCCCCAGGGCGCCGGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAGGTCGCGCTGGTCATCCATGACTGG +
Preference number: 6 (lower is better)
Translates to: AWALRGPRAPAQHGQ*LIVGDKVALVIHDW
Trigger: CCAGTCATGGATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGGGGCCCCGGAGAGCCCATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS GCA 72 bp GCGCCTGCATCAGCAGCGGGGTGGCCATGCGCATCTTaGTCACAGGCTTGGGAGCTGTGGGGACAGGAACGA +
Preference number: 6 (lower is better)
Translates to: APASAAGWPCAS*SQAWELWGQER
Trigger: TCGTTCCTGTCCCCACAGCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGCAGGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517791.1
CDS CAA 72 bp GAAACGCCCAAGGCTCTCTTGGCAGCAGCTGTGACCTaGGCGCCCTCACTGGATTGCGGGCAGCACTGGGGC +
Preference number: 6 (lower is better)
Translates to: ETPKALLAAAVT*APSLDCGQHWG
Trigger: GCCCCAGTGCTGCCCGCAATCCAGTGAGGGCGCCAAGGTCACAGCTGCTGCCAAGAGAGCCTTGGGCGTTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CAA 90 bp GCACTTGCTCTCCGGGGCCCCAGGGCGCCGGCCCAGCATGGGCAGTaGCTCATTGTTGGAGATAAGGTCGCGCTGGTCATCCATGACTGG +
Preference number: 6 (lower is better)
Translates to: ALALRGPRAPAQHGQ*LIVGDKVALVIHDW
Trigger: CCAGTCATGGATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGGGGCCCCGGAGAGCAAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS GCA 72 bp GCGCCTGCATCAGCAGCGGGGTGGCCATGCGCATCTTaGTCACAGGCTTGGGAGGCTTGGGAAGCTTCATGC +
Preference number: 6 (lower is better)
Translates to: APASAAGWPCAS*SQAWEAWEASC
Trigger: GCATGAAGCTTCCCAAGCCTCCCAAGCCTGTGAGCAAGATGCGCATGGCCACCCCGCTGCTGATGCAGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000522153.1
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 72 bp AGCAGCTTCAGGAGAGCCCCGAGGGTCCAGAAGCCCTaGCACGCTAAAGCTCCCACTCCCTGTACCTTTCGG +
Preference number: 6 (lower is better)
Translates to: SSFRRAPRVQKP*HAKAPTPCTFR
Trigger: CCGAAAGGTACAGGGAGTGGGAGCTTTAGCGTGCCAGGGCTTCTGGACCCTCGGGGCTCTCCTGAAGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517752.5
ENST00000524315.6
CDS CAA 72 bp CCAGGGCGCCGGCCCAGCATGGGCAGTTGCTCATTGTaGGAGATAAGGTCGCGCTGGTCATCCATGACTGGC +
Preference number: 6 (lower is better)
Translates to: PGRRPSMGSCSL*EIRSRWSSMTG
Trigger: GCCAGTCATGGATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000518797.6
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CAA 72 bp GCCCCAGGGCGCCGGCCCAGCATGGGCAGTTGCTCATaGTTGGAGATAAGGTCGCGCTGGTCATCCATGACT +
Preference number: 6 (lower is better)
Translates to: APGRRPSMGSCS*LEIRSRWSSMT
Trigger: AGTCATGGATGACCAGCGCGACCTTATCTCCAACAATGAGCAACTGCCCATGCTGGGCCGGCGCCCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000518797.6
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CAA 90 bp ATGAGGTGGGAAACGCCCAAGGCTCTCTTGGCAGCAGCTGTGACCTaGGCGCCCTCACTGGATTGCGGGCAGCACTGGGGCAAGGTCATT +
Preference number: 6 (lower is better)
Translates to: MRWETPKALLAAAVT*APSLDCGQHWGKVI
Trigger: AATGACCTTGCCCCAGTGCTGCCCGCAATCCAGTGAGGGCGCCAAGGTCACAGCTGCTGCCAAGAGAGCCTTGGGCGTTTCCCACCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CCA 72 bp GCATCACATGGTCCTCTGTCATGTTGCCATACTTGGTaGCATTCTGCATGGGCTCTCCGGGGCCCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: ASHGPLSCCHTW*HSAWALRGPRA
Trigger: CGCCCTGGGGCCCCGGAGAGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CAA 90 bp CCTGCACTCACCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: PALTWSRCITWSSVM*PYLVAFCMGPWGRA
Trigger: AGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGGTGAGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517791.1
ENST00000523813.2
ENST00000523836.6
CDS CCA 72 bp GGTGCATCACATGGTCCTCTGTCATGTTGCCATACTTaGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: GASHGPLSCCHT*WHSAWAPGAGL
Trigger: GAGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 72 bp GGTGCATCACATGGTCCTCTGTCATGTTGCCATACTTaGTGGCATTCTGCATGGGCTCTCCGGGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: GASHGPLSCCHT*WHSAWALRGPR
Trigger: CCTGGGGCCCCGGAGAGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CCA 72 bp CCCGGGTGGACAGCAGGGATGTGGCTGACCTCTTCCTaGCACTTGGTCAGTACTGAAGCGACAGGCATGATG +
Preference number: 6 (lower is better)
Translates to: PGWTAGMWLTSS*HLVSTEATGMM
Trigger: CATCATGCCTGTCGCTTCAGTACTGACCAAGTGCCAGGAAGAGGTCAGCCACATCCCTGCTGTCCACCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CAA 72 bp CTTGGCAGCAGCTGTGACCTTGGCGCCCTCACTGGATaGCGGGCAGCACTGGGGCAAGGTCATTACAAGGAT +
Preference number: 6 (lower is better)
Translates to: LGSSCDLGALTG*RAALGQGHYKD
Trigger: ATCCTTGTAATGACCTTGCCCCAGTGCTGCCCGCAATCCAGTGAGGGCGCCAAGGTCACAGCTGCTGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CAA 90 bp GGGTCAGCATTCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: GSAFWSRCITWSSVM*PYLVAFCMGPWGRA
Trigger: AGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGAATGCTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000517752.5
ENST00000524315.6
CDS CAA 90 bp CTTGCACAGTGCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTCTGCATGGGCTCTCCGGGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: LAQCWSRCITWSSVM*PYLVAFCMGSPGPQ
Trigger: CTGGGGCCCCGGAGAGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGCACTGTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CAA 90 bp CTTCAGGAGCTGGGTCCAATTGCTCCCCATTGTGGGCCCAGAGCCTaGCACAGTGCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGT +
Preference number: 6 (lower is better)
Translates to: LQELGPIAPHCGPRA*HSAGAGASHGPLSC
Trigger: ACATGACAGAGGACCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATTGGACCCAGCTCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CAA 90 bp CAAGGCTCTCTTGGCAGCAGCTGTGACCTTGGCGCCCTCACTGGATaGCGGGCAGCACTGGGGCAAGGTCATTACAAGGATTCCTTTCTG +
Preference number: 6 (lower is better)
Translates to: QGSLGSSCDLGALTG*RAALGQGHYKDSFL
Trigger: CAGAAAGGAATCCTTGTAATGACCTTGCCCCAGTGCTGCCCGCAATCCAGTGAGGGCGCCAAGGTCACAGCTGCTGCCAAGAGAGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CAA 90 bp CTTGGTCAGTACTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: LGQYWSRCITWSSVM*PYLVAFCMGPWGRA
Trigger: AGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGTACTGACCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS GCA 72 bp CCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: PGAGASHGPLSC*HTWWHSAWAPG
Trigger: CCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517791.1
ENST00000523813.2
ENST00000523836.6
CDS GCA 72 bp TTGGCAGCAGCTGTGACCTTGGCGCCCTCACTGGATTaGGGGCAGCACTGGGGCAAGGTCATTACAAGGATT +
Preference number: 6 (lower is better)
Translates to: LAAAVTLAPSLD*GQHWGKVITRI
Trigger: AATCCTTGTAATGACCTTGCCCCAGTGCTGCCCGCAATCCAGTGAGGGCGCCAAGGTCACAGCTGCTGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CCA 72 bp TGGCACGCTAAAGCTCCCACTCCCTGTACCTTTCGGTaGAGCGTCAGTGGGCTTTTGCTCCAAGGAGTGCCT +
Preference number: 6 (lower is better)
Translates to: WHAKAPTPCTFR*SVSGLLLQGVP
Trigger: AGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGGAGTGGGAGCTTTAGCGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517752.5
ENST00000524315.6
CDS CCA 72 bp TGCTCCCCATTGTGGGCCCAGAGCCTTGCACAGTGCTaGAGCAGGTGCATCACATGGTCCTCTGTCATGTTG +
Preference number: 6 (lower is better)
Translates to: CSPLWAQSLAQC*SRCITWSSVML
Trigger: CAACATGACAGAGGACCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CAA 72 bp AGGTGCATCACATGGTCCTCTGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGCCCCTGGGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: RCITWSSVMLPY*VAFCMGPWGRA
Trigger: AGCCCTGCCCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CAA 72 bp AGGTGCATCACATGGTCCTCTGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGCTCTCCGGGGCCCCAG +
Preference number: 6 (lower is better)
Translates to: RCITWSSVMLPY*VAFCMGSPGPQ
Trigger: CTGGGGCCCCGGAGAGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS TCA 72 bp GAGATAAGGTCGCGCTGGTCATCCATGACTGGCTTCTaGTCTTCCCGACAGCTCCTGCTTCTCCTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: EIRSRWSSMTGF*SSRQLLLLLLC
Trigger: GCACAGGAGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCGACCTTATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517791.1
ENST00000518797.6
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS GCA 72 bp TCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: SGAGASHGPLSC*HTWWHSAWAPG
Trigger: CCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000524315.6
CDS GCA 72 bp GCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCTCTCCGG +
Preference number: 6 (lower is better)
Translates to: AGAGASHGPLSC*HTWWHSAWALR
Trigger: CCGGAGAGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS GCA 72 bp GCAGTGTTTCGGGCAGGTTCTACCCCAGGCACCCTGTaGTGTACCATCCTCTATGAGAGAGGTCACCTGTAC +
Preference number: 6 (lower is better)
Translates to: AVFRAGSTPGTL*CTILYERGHLY
Trigger: GTACAGGTGACCTCTCTCATAGAGGATGGTACAGCACAGGGTGCCTGGGGTAGAACCTGCCCGAAACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS GCA 72 bp ACTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: TGAGASHGPLSC*HTWWHSAWAPG
Trigger: CCCAGGGGCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS GCA 72 bp CAGCACTGGGGCAAGGTCATTACAAGGATTCCTTTCTaGAGTGTTTCGGGCAGGTTCTACCCCAGGCACCCT +
Preference number: 6 (lower is better)
Translates to: QHWGKVITRIPF*SVSGRFYPRHP
Trigger: AGGGTGCCTGGGGTAGAACCTGCCCGAAACACTGCAGAAAGGAATCCTTGTAATGACCTTGCCCCAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CCA 72 bp AGCTCCCACTCCCTGTACCTTTCGGTGGAGCGTCAGTaGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAA +
Preference number: 6 (lower is better)
Translates to: SSHSLYLSVERQ*AFAPRSACSFQ
Trigger: TTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGGAGTGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517752.5
ENST00000524315.6
CDS CAA 72 bp TGGACAGCAGGGATGTGGCTGACCTCTTCCTGGCACTaGGTCAGTACTGAAGCGACAGGCATGATGAGGACA +
Preference number: 6 (lower is better)
Translates to: WTAGMWLTSSWH*VSTEATGMMRT
Trigger: TGTCCTCATCATGCCTGTCGCTTCAGTACTGACCAAGTGCCAGGAAGAGGTCAGCCACATCCCTGCTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CAA 90 bp AAAGCTCCCACTCCCTGTACCTTTCGGTGGAGCGTCAGTGGGCTTTaGCTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGCCAATGGTG +
Preference number: 6 (lower is better)
Translates to: KAPTPCTFRWSVSGL*LQGVPAHFKQEPMV
Trigger: CACCATTGGCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGGTACAGGGAGTGGGAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517752.5
ENST00000524315.6
CDS TCA 72 bp GATGTGGCTGACCTCTTCCTGGCACTTGGTCAGTACTaGAGCGACAGGCATGATGAGGACACAGTGAGTGAG +
Preference number: 6 (lower is better)
Translates to: DVADLFLALGQY*SDRHDEDTVSE
Trigger: CTCACTCACTGTGTCCTCATCATGCCTGTCGCTTCAGTACTGACCAAGTGCCAGGAAGAGGTCAGCCACATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS GCA 72 bp TCCAGTGACTCTTTCGGTGGAGCGTCAGTGGGCTTTTaGTCCAAGGAGTGCCTGCTCATTTCAAACAGGAGC +
Preference number: 6 (lower is better)
Translates to: SSDSFGGASVGF*SKECLLISNRS
Trigger: GCTCCTGTTTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGAGTCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353334.11
ENST00000523836.6
CDS GCA 72 bp AATTGCTCCCCATTGTGGGCCCAGAGCCTTGCACAGTaGTGGCATAGGACAGACACGCAGTACAAATTTGGG +
Preference number: 6 (lower is better)
Translates to: NCSPLWAQSLAQ*WHRTDTQYKFG
Trigger: CCCAAATTTGTACTGCGTGTCTGTCCTATGCCAGCACTGTGCAAGGCTCTGGGCCCACAATGGGGAGCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523813.2
ENST00000523836.6
CDS GCA 72 bp TCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTTaGCATACTTGGTGGCATTCTGCATGGGGCTTGGGA +
Preference number: 6 (lower is better)
Translates to: SGAGASHGPLSC*HTWWHSAWGLG
Trigger: TCCCAAGCCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS CCA 72 bp CCTCCAGTTCCAGTGACTCTTTCGGTGGAGCGTCAGTaGGCTTTTGCTCCAAGGAGTGCCTGCTCATTTCAA +
Preference number: 6 (lower is better)
Translates to: PPVPVTLSVERQ*AFAPRSACSFQ
Trigger: TTGAAATGAGCAGGCACTCCTTGGAGCAAAAGCCCACTGACGCTCCACCGAAAGAGTCACTGGAACTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353334.11
ENST00000523836.6
CDS CCA 72 bp CAGAGCCTTGCACAGTGCTGGAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCATACTTGGTGGCATTC +
Preference number: 6 (lower is better)
Translates to: QSLAQCWSRCIT*SSVMLPYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGCACTGTGCAAGGCTCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518797.6
CDS CAA 90 bp GGGTCAGCATTCTGGAGCAGGTGCATCACATGGTCCTCTGTCATGTaGCCATACTTGGTGGCATTCTGCATGGGGCTTGGGAAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: GSAFWSRCITWSSVM*PYLVAFCMGLGKLH
Trigger: ATGAAGCTTCCCAAGCCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGAATGCTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS CCA 72 bp ATTGTTGGAGATAAGGTCGCGCTGGTCATCCATGACTaGCTTCTGATCTTCCCGACAGCTCCTGCTTCTCCT +
Preference number: 6 (lower is better)
Translates to: IVGDKVALVIHD*LLIFPTAPASP
Trigger: AGGAGAAGCAGGAGCTGTCGGGAAGATCAGAAGCCAGTCATGGATGACCAGCGCGACCTTATCTCCAACAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000377795.7
ENST00000517752.5
ENST00000517791.1
ENST00000518797.6
ENST00000522153.1
ENST00000522246.5
ENST00000523208.6
ENST00000523813.2
ENST00000523836.6
ENST00000524315.6
CDS CCA 72 bp TTCAGGGGGTCAGCATTCTGGAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCATACTTGGTGGCATTC +
Preference number: 6 (lower is better)
Translates to: FRGSAFWSRCIT*SSVMLPYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGAATGCTGACCCCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000009530.12
ENST00000353334.11
ENST00000517752.5
ENST00000522246.5
ENST00000524315.6
CDS CCA 72 bp CTGGCACTTGGTCAGTACTGGAGCAGGTGCATCACATaGTCCTCTGTCATGTTGCCATACTTGGTGGCATTC +
Preference number: 6 (lower is better)
Translates to: LALGQYWSRCIT*SSVMLPYLVAF
Trigger: GAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCTGCTCCAGTACTGACCAAGTGCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523208.6
CDS CCA 72 bp GGTGCATCACATGGTCCTCTGTCATGTTGCCATACTTaGTGGCATTCTGCATGGGGCTTGGGAAGCTTCATG +
Preference number: 6 (lower is better)
Translates to: GASHGPLSCCHT*WHSAWGLGSFM
Trigger: CATGAAGCTTCCCAAGCCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS CAA 90 bp GCTGGAGAGGAATCTGATTCGTCCACAGAAGGCCACTCCGCCCACTaGGTAGATGTGGAAGTGAAAGCTACAAAGGCTGGAAATACCCCA +
Preference number: 6 (lower is better)
Translates to: AGEESDSSTEGHSAH*VDVEVKATKAGNTP
Trigger: TGGGGTATTTCCAGCCTTTGTAGCTTTCACTTCCACATCTACCAAGTGGGCGGAGTGGCCTTCTGTGGACGAATCAGATTCCTCTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517791.1
ENST00000523813.2
ENST00000524315.6
CDS CAA 72 bp AGGTGCATCACATGGTCCTCTGTCATGTTGCCATACTaGGTGGCATTCTGCATGGGGCTTGGGAAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: RCITWSSVMLPY*VAFCMGLGKLH
Trigger: ATGAAGCTTCCCAAGCCCCATGCAGAATGCCACCAAGTATGGCAACATGACAGAGGACCATGTGATGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522246.5
CDS TCA 72 bp GTCACCCTTGTATTCAGTAATCCAGAGAGCACATGTTaGAAGTCTGCCATGAGCCAGGTATACAGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: VTLVFSNPESTC*KSAMSQVYRPW
Trigger: CCAAGGCCTGTATACCTGGCTCATGGCAGACTTTCAACATGTGCTCTCTGGATTACTGAATACAAGGGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517791.1
ENST00000523813.2
ENST00000523836.6
CDS TCA 72 bp TGTGTCCAATTCACCTCAGAAGTTGATGGTTTCTTCTaGCACTCAAAGCCCATTACAGTTTTGGGCCAGGCA +
Preference number: 6 (lower is better)
Translates to: CVQFTSEVDGFF*HSKPITVLGQA
Trigger: TGCCTGGCCCAAAACTGTAATGGGCTTTGAGTGTCAGAAGAAACCATCAACTTCTGAGGTGAATTGGACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CAA 72 bp GAAGTGAATGGCCATGTGTCCAATTCACCTCAGAAGTaGATGGTTTCTTCTGACACTCAAAGCCCATTACAG +
Preference number: 6 (lower is better)
Translates to: EVNGHVSNSPQK*MVSSDTQSPLQ
Trigger: CTGTAATGGGCTTTGAGTGTCAGAAGAAACCATCAACTTCTGAGGTGAATTGGACACATGGCCATTCACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524315.6
CDS CAA 90 bp ATCAAAAAGGAAGTGAATGGCCATGTGTCCAATTCACCTCAGAAGTaGATGGTTTCTTCTGACACTCAAAGCCCATTACAGTTTTGGGCC +
Preference number: 6 (lower is better)
Translates to: IKKEVNGHVSNSPQK*MVSSDTQSPLQFWA
Trigger: GGCCCAAAACTGTAATGGGCTTTGAGTGTCAGAAGAAACCATCAACTTCTGAGGTGAATTGGACACATGGCCATTCACTTCCTTTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524315.6