RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CD59 (Homo sapiens)

Ensembl gene IDs: ENSG00000085063

Ensembl transcript IDs: ENST00000351554.8, ENST00000395850.9, ENST00000415002.7, ENST00000426650.7, ENST00000437761.6, ENST00000445143.6, ENST00000527577.5, ENST00000528700.2, ENST00000528987.1, ENST00000533403.6, ENST00000642928.2, ENST00000643183.1, ENST00000651485.1, ENST00000651785.1, ENST00000652086.1, ENST00000652678.1

Found 1115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTaGCTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGAGTCA +
Preference number: 1 (lower is better)
Translates to: RTTQERGVWEKLSWC*LRDEGSRLLPEMES
Trigger: TGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
3UTR GCA 90 bp CTGACCAGGTGCTCAGCCTCTTTAGGGATATGTCACAATTTGCCGTaGCCGGTGGCTCTGGGCAGCCTTTGGACATGTAGTGGTTGTGTC +
Preference number: 1 (lower is better)
Translates to: LTRCSASLGICHNLP*PVALGSLWTCSGCV
Trigger: GACACAACCACTACATGTCCAAAGGCTGCCCAGAGCCACCGGGCACGGCAAATTGTGACATATCCCTAAAGAGGCTGAGCACCTGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp TTTGAACTCAGGCTGAGCCACTACTGGCTTCTCTCTAACCCAGCTTaGAGACGGCCTATTGTGCGACTTCGCCTTCTAACTGTGGGAGCC +
Preference number: 1 (lower is better)
Translates to: FELRLSHYWLLSNPA*RRPIVRLRLLTVGA
Trigger: GGCTCCCACAGTTAGAAGGCGAAGTCGCACAATAGGCCGTCTGCAAGCTGGGTTAGAGAGAAGCCAGTAGTGGCTCAGCCTGAGTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp AGCTCTGCATCTGGACACACTGTCAGCCATCAGATCCTGACCAGGTaGTCAGCCTCTTTAGGGATATGTCACAATTTGCCGTGCCCGGTG +
Preference number: 1 (lower is better)
Translates to: SSASGHTVSHQILTR*SASLGICHNLPCPV
Trigger: CACCGGGCACGGCAAATTGTGACATATCCCTAAAGAGGCTGAGCACCTGGTCAGGATCTGATGGCTGACAGTGTGTCCAGATGCAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 90 bp GCCCGGTGGCTCTGGGCAGCCTTTGGACATGTAGTGGTTGTGTCTTaGAATACAAGAGTTGTGCCTGAATCTGGGACTCTCTGTGACCCT +
Preference number: 1 (lower is better)
Translates to: ARWLWAAFGHVVVVS*NTRVVPESGTLCDP
Trigger: AGGGTCACAGAGAGTCCCAGATTCAGGCACAACTCTTGTATTCCAAGACACAACCACTACATGTCCAAAGGCTGCCCAGAGCCACCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 90 bp CACTCTTCCTGCTCTTGGACATCAGACTCCAGGTTCTTCAGCCTTTaGAATCTAGGACTTGCACCAGTGGGTTGGTTGCCAGGGGCTCTT +
Preference number: 1 (lower is better)
Translates to: HSSCSWTSDSRFFSL*NLGLAPVGWLPGAL
Trigger: AAGAGCCCCTGGCAACCAACCCACTGGTGCAAGTCCTAGATTCCAAAGGCTGAAGAACCTGGAGTCTGATGTCCAAGAGCAGGAAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR TCA 90 bp CCTATAGCCAGCTTGGGTGGGGCTATTGAGAGTCAGCACCAGCACTaGTCATATATAGGATCAGCCTACTGGGGTTGGCCACGTTGTATG +
Preference number: 1 (lower is better)
Translates to: PIASLGGAIESQHQH*SYIGSAYWGWPRCM
Trigger: CATACAACGTGGCCAACCCCAGTAGGCTGATCCTATATATGATCAGTGCTGGTGCTGACTCTCAATAGCCCCACCCAAGCTGGCTATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR TCA 90 bp TCACCACCCAATACTGAACACTATGACAGTTCCTGTAAATCCAGATaGGTGGAGGGCACAGGGTATTGGCTCTCGAGCAGAGAGCCAGTA +
Preference number: 1 (lower is better)
Translates to: SPPNTEHYDSSCKSR*VEGTGYWLSSREPV
Trigger: TACTGGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTCCACTCATCTGGATTTACAGGAACTGTCATAGTGTTCAGTATTGGGTGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp ACACCTACTTCACTCTTAGACTTCTTCCTTCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCT +
Preference number: 1 (lower is better)
Translates to: TPTSLLDFFLQVGLP*KQDWSSKSPRAPLS
Trigger: AGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGAAGAAGTCTAAGAGTGAAGTAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR GCA 90 bp TCTAAGTTTTCATGCCCTGCTATCTGGAACACTTCCCCACTTCCCTaGCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTG +
Preference number: 1 (lower is better)
Translates to: SKFSCPAIWNTSPLP*QKSSSSALRILLSL
Trigger: CAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCAGGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGAAAACTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CCA 90 bp GAAAGAACAGTCTTGAATTCAACTTCAGCAGAACCTTTCCCTCCCTaGGCTCCAAAGCACTATGTCACCTACCTCTCCACTCAAATGCCC +
Preference number: 1 (lower is better)
Translates to: ERTVLNSTSAEPFPP*APKHYVTYLSTQMP
Trigger: GGGCATTTGAGTGGAGAGGTAGGTGACATAGTGCTTTGGAGCCCAGGGAGGGAAAGGTTCTGCTGAAGTTGAATTCAAGACTGTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR TCA 90 bp ATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGT +
Preference number: 1 (lower is better)
Translates to: MMLTDYIQGARGKII*GLQRTHSSCHCKAG
Trigger: ACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR TCA 90 bp TTTGGTATGGCCACTATGGTGGTAGACACTGTCTACCTTGTTTGCTaGGTCTTCTGGCTTTCTTCCACTCTTCCTGCTCTTGGACATCAG +
Preference number: 1 (lower is better)
Translates to: FGMATMVVDTVYLVC*VFWLSSTLPALGHQ
Trigger: CTGATGTCCAAGAGCAGGAAGAGTGGAAGAAAGCCAGAAGACTCAGCAAACAAGGTAGACAGTGTCTACCACCATAGTGGCCATACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATaGTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATG +
Preference number: 1 (lower is better)
Translates to: HGIPEVYESVPCERG*SYTPAPPSKDVLMM
Trigger: CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR TCA 90 bp AGTATACAAAATAGGCAGAGAAGTAGACTTGCTGACCTGAGGAGCTaGGTGGGAAGCATGGACTTGCCAACTTACCTAAGTGACCTTGAG +
Preference number: 1 (lower is better)
Translates to: SIQNRQRSRLADLRS*VGSMDLPTYLSDLE
Trigger: CTCAAGGTCACTTAGGTAAGTTGGCAAGTCCATGCTTCCCACTCAGCTCCTCAGGTCAGCAAGTCTACTTCTCTGCCTATTTTGTATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp GCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTC +
Preference number: 1 (lower is better)
Translates to: AVTAKLVFPRAKEEA*NLVQVTPTSLLDFF
Trigger: GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR TCA 90 bp ATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTaGCTACATCCAAGGAGCCAGAGGAAAAATAATCTGAGGGCTGCA +
Preference number: 1 (lower is better)
Translates to: IYSCPTLQRCTNDAN*LHPRSQRKNNLRAA
Trigger: TGCAGCCCTCAGATTATTTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR TCA 90 bp TACAGTATTGCCTTTGGGTCCAGGCACTCAACCTTGTCTATGGCATaGGTCACAGCAACTTTTTGCAGAAAGCAACCCCAAAGTTTAAGG +
Preference number: 1 (lower is better)
Translates to: YSIAFGSRHSTLSMA*VTATFCRKQPQSLR
Trigger: CCTTAAACTTTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGACTCATGCCATAGACAAGGTTGAGTGCCTGGACCCAAAGGCAATACTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp CTAGGAGTTAGCAGGAGGCTGGATGCAGATGGTAAAACATACCCCTaGAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACT +
Preference number: 1 (lower is better)
Translates to: LGVSRRLDADGKTYP*RSVVIKDDLWKSQT
Trigger: AGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATGTTTTACCATCTGCATCCAGCCTCCTGCTAACTCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp TTTTCCTATGTTCAGGGAACGGCATCAACAGAAGAAAGCTGGCACTaGTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGCA +
Preference number: 1 (lower is better)
Translates to: FSYVQGTASTEESWH*SGCLLSVATIKHTA
Trigger: TGCAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATGCCGTTCCCTGAACATAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp GGGTGCTGTTTGCCTAGTACTATAAATGTCTTTACATTACAGTATTaGCTTTGGGTCCAGGCACTCAACCTTGTCTATGGCATGAGTCAC +
Preference number: 1 (lower is better)
Translates to: GCCLPSTINVFTLQY*LWVQALNLVYGMSH
Trigger: GTGACTCATGCCATAGACAAGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAATGTAAAGACATTTATAGTACTAGGCAAACAGCACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 90 bp AGCTCATTTTCCCTCAAGCGGGTTGTGACGTCGTTGAAATTGCAATaGTCAAACTTCCAACACTTGTTATACACTTGTAACCCTCCTACG +
Preference number: 1 (lower is better)
Translates to: SSFSLKRVVTSLKLQ*SNFQHLLYTCNPPT
Trigger: CGTAGGAGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGACGTCACAACCCGCTTGAGGGAAAATGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651485.1
3UTR TCA 90 bp AAACAAATGTCCAGGAAACTCAAGTTTGTGATGAAAGAACAGTCTTaGATTCAACTTCAGCAGAACCTTTCCCTCCCTGGGCTCCAAAGC +
Preference number: 1 (lower is better)
Translates to: KQMSRKLKFVMKEQS*IQLQQNLSLPGLQS
Trigger: GCTTTGGAGCCCAGGGAGGGAAAGGTTCTGCTGAAGTTGAATTCAAGACTGTTCTTTCATCACAAACTTGAGTTTCCTGGACATTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 90 bp GGACATATGTATAAGCAGTGCCAGGGACAACTAGTAGGTGGTCATTaGAGTGTGGCTACAGTTATTATACAGTTACACATGGATTCCTTG +
Preference number: 1 (lower is better)
Translates to: GHMYKQCQGQLVGGH*SVATVIIQLHMDSL
Trigger: CAAGGAATCCATGTGTAACTGTATAATAACTGTAGCCACACTCCAATGACCACCTACTAGTTGTCCCTGGCACTGCTTATACATATGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR TCA 90 bp ATTGGAGTGTGGCTACAGTTATTATACAGTTACACATGGATTCCTTaGTTCCCCATTAAGCCCTGGTGGATGAATGAGGAAAATGCAGCA +
Preference number: 1 (lower is better)
Translates to: IGVWLQLLYSYTWIP*FPIKPWWMNEENAA
Trigger: TGCTGCATTTTCCTCATTCATCCACCAGGGCTTAATGGGGAATCAAGGAATCCATGTGTAACTGTATAATAACTGTAGCCACACTCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 90 bp TGTTTGCCTAGTACTATAAATGTCTTTACATTACAGTATTGCCTTTaGGTCCAGGCACTCAACCTTGTCTATGGCATGAGTCACAGCAAC +
Preference number: 1 (lower is better)
Translates to: CLPSTINVFTLQYCL*VQALNLVYGMSHSN
Trigger: GTTGCTGTGACTCATGCCATAGACAAGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAATGTAAAGACATTTATAGTACTAGGCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 90 bp CAGATCCTGACCAGGTGCTCAGCCTCTTTAGGGATATGTCACAATTaGCCGTGCCCGGTGGCTCTGGGCAGCCTTTGGACATGTAGTGGT +
Preference number: 2 (lower is better)
Translates to: QILTRCSASLGICHN*PCPVALGSLWTCSG
Trigger: ACCACTACATGTCCAAAGGCTGCCCAGAGCCACCGGGCACGGCAAATTGTGACATATCCCTAAAGAGGCTGAGCACCTGGTCAGGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 90 bp CCACTCTTCCTGCTCTTGGACATCAGACTCCAGGTTCTTCAGCCTTaGGAATCTAGGACTTGCACCAGTGGGTTGGTTGCCAGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: PLFLLLDIRLQVLQP*ESRTCTSGLVARGS
Trigger: AGAGCCCCTGGCAACCAACCCACTGGTGCAAGTCCTAGATTCCAAAGGCTGAAGAACCTGGAGTCTGATGTCCAAGAGCAGGAAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTACACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTAAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 2 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp TGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 2 (lower is better)
Translates to: CREPTQAVTAKLVFPRAKKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...CTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR CCA 90 bp CTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAACCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: LRAAENPLKLSLQSWSSQPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...TTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CAA 90 bp GAGTCAGCACCAGCACTGATCATATATAGGATCAGCCTACTGGGGTaGGCCACGTTGTATGTAGCTGCGAATAGCAAGGAGGGGAACAGC +
Preference number: 2 (lower is better)
Translates to: ESAPALIIYRISLLG*ATLYVAANSKEGNS
Trigger: GCTGTTCCCCTCCTTGCTATTCGCAGCTACATACAACGTGGCCAACCCCAGTAGGCTGATCCTATATATGATCAGTGCTGGTGCTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp CCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGCAGCAACAGAAACTACGGTGGCTGTGGGCATaGTCAGTACTTCCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: PQGDLLALVQICWQQQKLRWLWA*SVLPQA
Trigger: GGCCTGAGGAAGTACTGACCATGCCCACAGCCACCG...TAGTTTCTGTTGCTGCCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 90 bp CCAGCACTGATCATATATAGGATCAGCCTACTGGGGTTGGCCACGTaGTATGTAGCTGCGAATAGCAAGGAGGGGAACAGCAACATCCCT +
Preference number: 2 (lower is better)
Translates to: PALIIYRISLLGLAT*YVAANSKEGNSNIP
Trigger: AGGGATGTTGCTGTTCCCCTCCTTGCTATTCGCAGCTACATACAACGTGGCCAACCCCAGTAGGCTGATCCTATATATGATCAGTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp CCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PSSGASLQTGLVFKVSQSTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...GCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp TTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCACAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: LLSLTDTHIWNIWHASMAQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...TGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: CQKSSSSALRILLSLTDTQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: SCHCKAGLPKSKGGSMQSQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...AGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp ATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCACACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: MKAFHVREDAHILLPHPPHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...TGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp GCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: ANRTGLQSLPEPLYLSQVHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...AACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 2 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR GCA 90 bp AGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 2 (lower is better)
Translates to: RAAENPLKLSLQSWSSQEYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...CTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR CCA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 2 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTATTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp TTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCATTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: LLSLTDTHIWNIWHASMAFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...TGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp CCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGCAGCAACAGAAACTAGAGGGCACAGGGTATTaGCTCTCGAGCAGAGAGCCA +
Preference number: 2 (lower is better)
Translates to: PQGDLLALVQICWQQQKLEGTGY*LSSREP
Trigger: TGGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTC...TAGTTTCTGTTGCTGCCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp ACACCTGAGAAGCTGCTTCTACGACCTGCTGAGGACATAATGATAAACACACACGGGAGTACAGAGGCCTaGAAGATGAGGGAGCTGGGT +
Preference number: 2 (lower is better)
Translates to: TPEKLLLRPAEDIMINTHGSTEA*KMRELG
Trigger: ACCCAGCTCCCTCATCTTCCAGGCCTCTGTACTCCC...GTGTGTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 2 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPEMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp CTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 2 (lower is better)
Translates to: LQRTHSSCHCKAGLPKSKMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...TTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp CTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 2 (lower is better)
Translates to: LQTGLVFKVSQSPSILARYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...CCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR CCA 90 bp TGTTCAGGGAACGGCATCAACAGAAGAAAGCTGGCACTGCTCAGGATGTCTTCTCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: CSGNGINRRKLALLRMSSLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...AGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATGCCGTTCCCTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp ACACCTGAGAAGCTGCTTCTACGACCTGCTGAGGACATAATGATAAACACACACCGACTCCTGGCTTTCTaGAGTGTGGCTGAATTCCCC +
Preference number: 2 (lower is better)
Translates to: TPEKLLLRPAEDIMINTHRLLAF*SVAEFP
Trigger: GGGGAATTCAGCCACACTCCAGAAAGCCAGGAGTCG...GTGTGTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 90 bp CCTCTTTGGTATGGCCACTATGGTGGTAGACACTGTCTACCTTGTTaGCTGAGTCTTCTGGCTTTCTTCCACTCTTCCTGCTCTTGGACA +
Preference number: 2 (lower is better)
Translates to: PLWYGHYGGRHCLPC*LSLLAFFHSSCSWT
Trigger: TGTCCAAGAGCAGGAAGAGTGGAAGAAAGCCAGAAGACTCAGCAAACAAGGTAGACAGTGTCTACCACCATAGTGGCCATACCAAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp AGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 2 (lower is better)
Translates to: SCHCKAGLPKSKGGSMQSRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...AGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 2 (lower is better)
Translates to: CQKSSSSALRILLSLTDTLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp AGAATCTCAATCCTGAGAGAGGCTTCCAAAACTGTCGACTCCTGGCTTTCTGGAGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 2 (lower is better)
Translates to: RISILREASKTVDSWLSGGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...TCCAGAAAGCCAGGAGTCGACAGTTTTGGAAGCCTCTCTCAGGATTGAGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp TTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 2 (lower is better)
Translates to: LLSLTDTHIWNIWHASMAMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...TGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CAA 90 bp ACCTTGTTTGCTGAGTCTTCTGGCTTTCTTCCACTCTTCCTGCTCTaGGACATCAGACTCCAGGTTCTTCAGCCTTTGGAATCTAGGACT +
Preference number: 2 (lower is better)
Translates to: TLFAESSGFLPLFLL*DIRLQVLQPLESRT
Trigger: AGTCCTAGATTCCAAAGGCTGAAGAACCTGGAGTCTGATGTCCAAGAGCAGGAAGAGTGGAAGAAAGCCAGAAGACTCAGCAAACAAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 2 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp GCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: AGLPKSKGGSMQSSSSHTTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...GGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp ATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: MPPWQHGIPEVYESVPCETNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...CTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp TTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: LACLHGNTGSLKFMKAFHTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...ATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp CAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: QKSSSSALRILLSLTDTHTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp ACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 2 (lower is better)
Translates to: TFGMPPWQHGIPEVYESVLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 2 (lower is better)
Translates to: HGIPEVYESVPCERGCSYGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp CATGAGCTCCACTTATCTACTCATCAGGTGTTCCTTGCACCCCTAGCTCATCCCTGTAAGGAAAGACACTaGGCTAACAGAGAACACAGA +
Preference number: 2 (lower is better)
Translates to: HELHLSTHQVFLAPLAHPCKERH*ANREHR
Trigger: TCTGTGTTCTCTGTTAGCTCAGTGTCTTTCCTTACA...GGGATGAGCTAGGGGTGCAAGGAACACCTGATGAGTAGATAAGTGGAGCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 2 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPEAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp ACACCTGAGAAGCTGCTTCTACGACCTGCTGAGGACATAATGATAAACACACACCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: TPEKLLLRPAEDIMINTHHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...GTGTGTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp CCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGACCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PPSKDVLMMLTDYIQGARPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...TCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp TGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: CKAGLPKSKGGSMQSSSSPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...ACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp GAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: EVYESVPCERGCSYTPAPPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...TGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: HGIPEVYESVPCERGCSYPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp GAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 2 (lower is better)
Translates to: EVYESVPCERGCSYTPAPLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...TGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp TTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCACACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 2 (lower is better)
Translates to: LLSLTDTHIWNIWHASMAHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...TGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 2 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp AGCCCATCAAGAATCCCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGCTTCCCAGTGTAGTCTaGCCAAAAAGTGGGTACATG +
Preference number: 2 (lower is better)
Translates to: SPSRIPQGDLLALVQICWLPSVV*PKSGYM
Trigger: CATGTACCCACTTTTTGGCCAGACTACACTGGGAAG...CCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGGGATTCTTGATGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp TGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 2 (lower is better)
Translates to: CKAGLPKSKGGSMQSSSSRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...ACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp ATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: ILLSLTDTHIWNIWHASMTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...CATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp GTGCCACAATTTAAGGACCAAGCTATTCTGGGAAGCCCAGAACAGTCTTTCCTTCTGCCCTCATCACAATaGATGTCAGTCAGTACTAGC +
Preference number: 2 (lower is better)
Translates to: VPQFKDQAILGSPEQSFLLPSSQ*MSVSTS
Trigger: GCTAGTACTGACTGACATTCATTGTGATGAGGGCAG...AAGGAAAGACTGTTCTGGGCTTCCCAGAATAGCTTGGTCCTTAAATTGTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp GGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: GGSMQSSSSHTYFTLRLLQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...AAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp CCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 2 (lower is better)
Translates to: PHMEHLACLHGNTGSLKFAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...AAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACAATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 2 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp TCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGTCGTTGAAATTGCAATaGTCAAACTTCCAACACTTG +
Preference number: 2 (lower is better)
Translates to: SFKWGFPANRTGLQSLPESLKLQ*SNFQHL
Trigger: CAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGA...CTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR CCA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGACAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 2 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp TTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 2 (lower is better)
Translates to: LRILLSLTDTHIWNIWHAQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...GGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp CATACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: HTPADLLLLRMTFGSLKLFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...CAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR CAA 90 bp GGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAA +
Preference number: 2 (lower is better)
Translates to: GLVFKVSQSPSILAR*LKLILFFPNRIHLE
Trigger: TTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CAA 90 bp CGGGTTGTGACGTCGTTGAAATTGCAATGCTCAAACTTCCAACACTaGTTATACACTTGTAACCCTCCTACGTGTCCTTTGAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: RVVTSLKLQCSNFQH*LYTCNPPTCPLSSA
Trigger: AGCTGAGCTCAAAGGACACGTAGGAGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGACGTCACAACCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
3UTR-3UTR TCA 90 bp GTGCCACAATTTAAGGACCAAGCTATTCTGGGAAGCCCAGAACAGTCTTTCCTTCTAGAATCTCAATCCTaGGAGAGGCTTCCAAAACTG +
Preference number: 2 (lower is better)
Translates to: VPQFKDQAILGSPEQSFLLESQS*ERLPKL
Trigger: CAGTTTTGGAAGCCTCTCTCAGGATTGAGATTCTAG...AAGGAAAGACTGTTCTGGGCTTCCCAGAATAGCTTGGTCCTTAAATTGTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp ATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 2 (lower is better)
Translates to: ILLSLTDTHIWNIWHASMAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...CATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 2 (lower is better)
Translates to: KNNLRAAENPLKLSLQSWAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...CCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp CCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGATACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 2 (lower is better)
Translates to: PPSKDVLMMLTDYIQGARYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...TCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR CCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCACCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp GAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 2 (lower is better)
Translates to: EEACNLVQVTPTSLLDFFPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp TACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTATTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: YPCRSVVIKDDLWKSQTVFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...TACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp TGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 2 (lower is better)
Translates to: CKAGLPKSKGGSMQSSSSHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...ACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CAA 90 bp CATCAACAGAAGAAAGCTGGCACTGCTCAGGATGTCTTCTTTCAGTaGCTACCATTAAGCATACTGCATATCCTTTTCGGCCATAACCAC +
Preference number: 2 (lower is better)
Translates to: HQQKKAGTAQDVFFQ*LPLSILHILFGHNH
Trigger: GTGGTTATGGCCGAAAAGGATATGCAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 2 (lower is better)
Translates to: NTGSLKFMKAFHVREDAHAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...ATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 2 (lower is better)
Translates to: NTGSLKFMKAFHVREDAHLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...ATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp AAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTATTTTATACATTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 2 (lower is better)
Translates to: KPQTSVSVLRAVTKVFYTFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...TGTATAAAATACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR CAA 90 bp CCAGAACAGTCTTTCCTTTATTATTCATCTCAATTAACCATTGTGTaGGTCTGGACTTGGGGGTGCAGGCATTCCCATCTCCCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: PEQSFLYYSSQLTIV*VWTWGCRHSHLPFK
Trigger: TTTGAAAGGGAGATGGGAATGCCTGCACCCCCAAGTCCAGACCAACACAATGGTTAATTGAGATGAATAATAAAGGAAAGACTGTTCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp TCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 2 (lower is better)
Translates to: SKDVLMMLTDYIQGARGKRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...TTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAATACAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: KDVLMMLTDYIQGARGKIQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...TATTTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAATCGTTGAAATTGCAATaGTCAAACTTCCAACACTTG +
Preference number: 2 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQSLKLQ*SNFQHL
Trigger: CAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGA...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR GCA 90 bp GCGATCCAGCTAACTTTGCATAGTTTCCTCTTGTGTAAAGTGAGGTGCAAGTACTTTACATTACAGTATTaGCTTTGGGTCCAGGCACTC +
Preference number: 2 (lower is better)
Translates to: AIQLTLHSFLLCKVRCKYFTLQY*LWVQAL
Trigger: GAGTGCCTGGACCCAAAGGCAATACTGTAATGTAAA...GTACTTGCACCTCACTTTACACAAGAGGAAACTATGCAAAGTTAGCTGGATCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp CTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCACAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 2 (lower is better)
Translates to: LYLSQVAQANFILSQQDPQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...TGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CAA 90 bp GCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGG +
Preference number: 2 (lower is better)
Translates to: ARLLKLILFFPNRIH*ENIKPLECGSKRKR
Trigger: CCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AAGGGGACAATCCAATGGGCTTATCACCACCCAATACTGAACACTATGACAGTTCACACATACCTGAACTaGCTTTCTACCAGTAACATT +
Preference number: 2 (lower is better)
Translates to: KGTIQWAYHHPILNTMTVHTYLN*LSTSNI
Trigger: AATGTTACTGGTAGAAAGGCAGTTCAGGTATGTGTG...AACTGTCATAGTGTTCAGTATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAACAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 2 (lower is better)
Translates to: SQVAQANFILSQQDPFGKQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CAA 90 bp AAATATACCCATACCTTGAAGCCCCCAGTACATTCAAGACCAAGTTaGGCAAATAGATTAGCATCTTTCAGGAAATACCATGAGCTCCAC +
Preference number: 2 (lower is better)
Translates to: KYTHTLKPPVHSRPS*ANRLASFRKYHELH
Trigger: GTGGAGCTCATGGTATTTCCTGAAAGATGCTAATCTATTTGCCAAACTTGGTCTTGAATGTACTGGGGGCTTCAAGGTATGGGTATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAACTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 2 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQELVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 2 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp CATACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGAAAGGGTGTCCCCACTaGATTCATACTATATACACA +
Preference number: 2 (lower is better)
Translates to: HTPADLLLLRMTFGSLKLKGCPH*IHTIYT
Trigger: TGTGTATATAGTATGAATGCAGTGGGGACACCCTTT...CAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp AAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTTTTACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 2 (lower is better)
Translates to: KSIIHCTRFVQQSIIKGFTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...AAAACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp CAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATACTCTGTAACTGTGTGTaGCAAAGCCAAGATATCCTA +
Preference number: 2 (lower is better)
Translates to: QTVTTKGVPTAFILYTHILCNCV*QSQDIL
Trigger: TAGGATATCTTGGCTTTGCCACACACAGTTACAGAG...TATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAAGACACACATAAGACATaGGGGCTAACTGCAAGGACA +
Preference number: 2 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEDTHKT*GLTART
Trigger: TGTCCTTGCAGTTAGCCCCCATGTCTTATGTGTGTC...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AAGAAATTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 2 (lower is better)
Translates to: KKFLHLQKSAYAIKYSQDLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...ATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTTCGTTGAAATTGCAATaGTCAAACTTCCAACACTTG +
Preference number: 2 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLSLKLQ*SNFQHL
Trigger: CAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGA...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR CCA 90 bp AAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTTTTCACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 2 (lower is better)
Translates to: KSIIHCTRFVQQSIIKGFHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...AAAACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CCA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAACACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 2 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 90 bp CATGAAGTTATAGCCAGGGGGTTAAATAAGAAGTTGATGACAAACTaGGTTTCTCTAACAAGTATGCAAGAAAACTCAAGTGCCACAATG +
Preference number: 2 (lower is better)
Translates to: HEVIARGLNKKLMTN*VSLTSMQENSSATM
Trigger: CATTGTGGCACTTGAGTTTTCTTGCATACTTGTTAGAGAAACCAAGTTTGTCATCAACTTCTTATTTAACCCCCTGGCTATAACTTCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AATCTTGAGATTCATTCACTAGAATACACAGGGAAAAGGAAAAAGTTTGCCCTTCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 2 (lower is better)
Translates to: NLEIHSLEYTGKRKKFALLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...AAGGGCAAACTTTTTCCTTTTCCCTGTGTATTCTAGTGAATGAATCTCAAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR TCA 90 bp AATCTTGAGATTCATTCACTAGAATACACAGGGAAAAGGAAAAAGTTTGCCCTTATATACACACATACCTaGACTGCCTTTCTACCAGTA +
Preference number: 2 (lower is better)
Translates to: NLEIHSLEYTGKRKKFALIYTHT*TAFLPV
Trigger: TACTGGTAGAAAGGCAGTTCAGGTATGTGTGTATAT...AAGGGCAAACTTTTTCCTTTTCCCTGTGTATTCTAGTGAATGAATCTCAAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR GCA 90 bp AATCTTGAGATTCATTCACTAGAATACACAGGGAAAAGGAAAAAGTTTGCCCTTCACACCATTGATGTATaGTATTACACTTTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: NLEIHSLEYTGKRKKFALHTIDV*YYTFPV
Trigger: CACTGGAAAAGTGTAATAGCATACATCAATGGTGTG...AAGGGCAAACTTTTTCCTTTTCCCTGTGTATTCTAGTGAATGAATCTCAAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GGACAGCCTCCAAATTGTCACCCTAGCCTTCAGGGCAAGGCTGCACACACGGCCGGAGGGCACAGGGTATaGGCTCTCGAGCAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: GQPPNCHPSLQGKAAHTAGGHRV*ALEQRA
Trigger: GGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTCC...GGCCGTGTGTGCAGCCTTGCCCTGAAGGCTAGGGTGACAATTTGGAGGCTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GGACAGCCTCCAAATTGTCACCCTAGCCTTCAGGGCAAGGCTGCACACACGGCCCAGGTTCTTCAGCCTTaGGAATCTAGGACTTGCACC +
Preference number: 3 (lower is better)
Translates to: GQPPNCHPSLQGKAAHTAQVLQP*ESRTCT
Trigger: GGTGCAAGTCCTAGATTCCAAAGGCTGAAGAACCTG...GGCCGTGTGTGCAGCCTTGCCCTGAAGGCTAGGGTGACAATTTGGAGGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR TCA 72 bp CAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTaGCTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAA +
Preference number: 3 (lower is better)
Translates to: QERGVWEKLSWC*LRDEGSRLLPE
Trigger: TTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR CAA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: REPTQAVTAKLVFPRAKEAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR GCA 72 bp AGGCTGAGCCACTACTGGCTTCTCTCTAACCCAGCTTaGAGACGGCCTATTGTGCGACTTCGCCTTCTAACT +
Preference number: 3 (lower is better)
Translates to: RLSHYWLLSNPA*RRPIVRLRLLT
Trigger: AGTTAGAAGGCGAAGTCGCACAATAGGCCGTCTGCAAGCTGGGTTAGAGAGAAGCCAGTAGTGGCTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 72 bp CCTGGCAGGAGGCTGGCTCTGACAGGAGGTTGTTTGTaGCACAATTTAAGGACCAAGCTATTCTGGGAAGCC +
Preference number: 3 (lower is better)
Translates to: PGRRLALTGGCL*HNLRTKLFWEA
Trigger: GGCTTCCCAGAATAGCTTGGTCCTTAAATTGTGGCACAAACAACCTCCTGTCAGAGCCAGCCTCCTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 72 bp TGCTCAGCCTCTTTAGGGATATGTCACAATTTGCCGTaGCCGGTGGCTCTGGGCAGCCTTTGGACATGTAGT +
Preference number: 3 (lower is better)
Translates to: CSASLGICHNLP*PVALGSLWTCS
Trigger: ACTACATGTCCAAAGGCTGCCCAGAGCCACCGGGCACGGCAAATTGTGACATATCCCTAAAGAGGCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp ACACCTGAGAAGCTGCTTCTACGACCTGCTGAGGACATAATGATAAACACACACGGAGGGCACAGGGTATaGGCTCTCGAGCAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: TPEKLLLRPAEDIMINTHGGHRV*ALEQRA
Trigger: GGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTCC...GTGTGTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR TCA 72 bp AGCTTGGGTGGGGCTATTGAGAGTCAGCACCAGCACTaGTCATATATAGGATCAGCCTACTGGGGTTGGCCA +
Preference number: 3 (lower is better)
Translates to: SLGGAIESQHQH*SYIGSAYWGWP
Trigger: TGGCCAACCCCAGTAGGCTGATCCTATATATGATCAGTGCTGGTGCTGACTCTCAATAGCCCCACCCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 72 bp TCTCCTGGTGTTGACTTAGGGATGAAGGCTCCAGGCTaGTGCCAGAAATGGAGTCACCAGCAGAAGAACTGT +
Preference number: 3 (lower is better)
Translates to: SPGVDLGMKAPG*CQKWSHQQKNC
Trigger: ACAGTTCTTCTGCTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
3UTR GCA 72 bp CACAATGAATGTCAGTCAGTACTAGCTCCAGCCAGCTaGTCAGCCCATCAAGAATCCCTCAGGGGGATCTGT +
Preference number: 3 (lower is better)
Translates to: HNECQSVLAPAS*SAHQESLRGIC
Trigger: ACAGATCCCCCTGAGGGATTCTTGATGGGCTGAGCAGCTGGCTGGAGCTAGTACTGACTGACATTCATTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: GSLKFMKAFHVREDAHILAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 3 (lower is better)
Translates to: ACLHGNTGSLKFMKAFHVALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...CACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTTCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 3 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp TCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 3 (lower is better)
Translates to: SLQTGLVFKVSQSPSILARVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...GGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
3UTR GCA 72 bp TCACTCTTAGACTTCTTCCTTCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCC +
Preference number: 3 (lower is better)
Translates to: SLLDFFLQVGLP*KQDWSSKSPRA
Trigger: GGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGAAGAAGTCTAAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR GCA 72 bp CCTGGTGTTGACTTAGGGATGAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAGCAGAAGAACTGTTTT +
Preference number: 3 (lower is better)
Translates to: PGVDLGMKAPGC*QKWSHQQKNCF
Trigger: AAAACAGTTCTTCTGCTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
3UTR CCA 72 bp CTGAACACTATGACAGTTCCTGTAAATCCAGATGAGTaGAGGGCACAGGGTATTGGCTCTCGAGCAGAGAGC +
Preference number: 3 (lower is better)
Translates to: LNTMTVPVNPDE*RAQGIGSRAES
Trigger: GCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTCCACTCATCTGGATTTACAGGAACTGTCATAGTGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 72 bp TGCTCTTGGACATCAGACTCCAGGTTCTTCAGCCTTTaGAATCTAGGACTTGCACCAGTGGGTTGGTTGCCA +
Preference number: 3 (lower is better)
Translates to: CSWTSDSRFFSL*NLGLAPVGWLP
Trigger: TGGCAACCAACCCACTGGTGCAAGTCCTAGATTCCAAAGGCTGAAGAACCTGGAGTCTGATGTCCAAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: GLQRTHSSCHCKAGLPKSPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...GCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR TCA 72 bp ACTGACTACATCCAAGGAGCCAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCACTCAAGCTGTCACTGC +
Preference number: 3 (lower is better)
Translates to: TDYIQGARGKII*GLQRTHSSCHC
Trigger: GCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTGGCTCCTTGGATGTAGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR TCA 72 bp GCCTTTGGGTCCAGGCACTCAACCTTGTCTATGGCATaGGTCACAGCAACTTTTTGCAGAAAGCAACCCCAA +
Preference number: 3 (lower is better)
Translates to: AFGSRHSTLSMA*VTATFCRKQPQ
Trigger: TTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGACTCATGCCATAGACAAGGTTGAGTGCCTGGACCCAAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 72 bp GTCTTGAATTCAACTTCAGCAGAACCTTTCCCTCCCTaGGCTCCAAAGCACTATGTCACCTACCTCTCCACT +
Preference number: 3 (lower is better)
Translates to: VLNSTSAEPFPP*APKHYVTYLST
Trigger: AGTGGAGAGGTAGGTGACATAGTGCTTTGGAGCCCAGGGAGGGAAAGGTTCTGCTGAAGTTGAATTCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp TCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: SKDVLMMLTDYIQGARGKAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...TTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: PSSGASLQTGLVFKVSQSPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...GCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 3 (lower is better)
Translates to: QKSSSSALRILLSLTDTHRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
3UTR TCA 72 bp TTAGAATCCTGTACCAGAAAGCTGCCCTCATCACAATaGATGTCAGTCAGTACTAGCTCCAGCCAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: LESCTRKLPSSQ*MSVSTSSSQLL
Trigger: GAGCAGCTGGCTGGAGCTAGTACTGACTGACATTCATTGTGATGAGGGCAGCTTTCTGGTACAGGATTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 72 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATaGCAACACGGGATCCCTGAAGTTTATGAAAGCGTT +
Preference number: 3 (lower is better)
Translates to: LTPTYGTFGMPP*QHGIPEVYESV
Trigger: AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CCA 72 bp TTAAGGATCTTGTTGTCCCTGACTGACACCCACATATaGAACATTTGGCATGCCTCCATGGCAACACGGGAT +
Preference number: 3 (lower is better)
Translates to: LRILLSLTDTHI*NIWHASMATRD
Trigger: ATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CCA 72 bp AGTTTTGAGGTTTTTGAACTCAGGCTGAGCCACTACTaGCTTCTCTCTAACCCAGCTTGCAGACGGCCTATT +
Preference number: 3 (lower is better)
Translates to: SFEVFELRLSHY*LLSNPACRRPI
Trigger: AATAGGCCGTCTGCAAGCTGGGTTAGAGAGAAGCCAGTAGTGGCTCAGCCTGAGTTCAAAAACCTCAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp AGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 3 (lower is better)
Translates to: RAAENPLKLSLQSWSSQESILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...CTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAATCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 3 (lower is better)
Translates to: LRAAENPLKLSLQSWSSQSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...TTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGCAGCAACAGAAACTAGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 3 (lower is better)
Translates to: PQGDLLALVQICWQQQKLALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...TAGTTTCTGTTGCTGCCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTTCGATTTTCAGCCACTaGTACCTCTCTAAGTTTTCA +
Preference number: 3 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPSIFSH*YLSKFS
Trigger: TGAAAACTTAGAGAGGTACAAGTGGCTGAAAATCGA...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: AQANFILSQQDPFGKYQAAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp ACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: TQAVTAKLVFPRAKEEACPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...GCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAACCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPEPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR GCA 72 bp GTTCAGGGAACGGCATCAACAGAAGAAAGCTGGCACTaGTCAGGATGTCTTCTTTCAGTTGCTACCATTAAG +
Preference number: 3 (lower is better)
Translates to: VQGTASTEESWH*SGCLLSVATIK
Trigger: CTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATGCCGTTCCCTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAACCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: VPCERGCSYTPAPPSKDVPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...TACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: AGLPKSKGGSMQSSSSHTPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...GGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTGTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 3 (lower is better)
Translates to: QTGLVFKVSQSPSILARLSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...CAACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAATCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 3 (lower is better)
Translates to: EPTQAVTAKLVFPRAKEESILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...TTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CTGGATGCAGATGGTAAAACATACCCCTGCAGATCTGTTGTTATTAAGGATGACGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 3 (lower is better)
Translates to: LDADGKTYPCRSVVIKDDALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...GTCATCCTTAATAACAACAGATCTGCAGGGGTATGTTTTACCATCTGCATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGCAGCAACAGAAACTAAGTCACAGCAACTTTTaGCAGAAAGCAACCCCAAAG +
Preference number: 3 (lower is better)
Translates to: PQGDLLALVQICWQQQKLSHSNF*QKATPK
Trigger: CTTTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGACT...TAGTTTCTGTTGCTGCCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 72 bp GCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACACCTACTTCACTCTTA +
Preference number: 3 (lower is better)
Translates to: AKLVFPRAKEEA*NLVQVTPTSLL
Trigger: TAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp TGGAAGTCTCAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATTCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 3 (lower is better)
Translates to: WKSQTVTTKGVPTAFILYSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...ATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTGAGACTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGCAGCAACAGAAACTAGAAAAGCATCATTCATaGCACTCGGTTTGTCCAACA +
Preference number: 3 (lower is better)
Translates to: PQGDLLALVQICWQQQKLEKHHS*HSVCPT
Trigger: TGTTGGACAAACCGAGTGCAATGAATGATGCTTTTC...TAGTTTCTGTTGCTGCCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 3 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
3UTR TCA 72 bp ACACCCATAAACTGCTGTCAGGAGGCAAAGTCCCTATaGGGTAATAATAAACCCACGAGGTTAAGGCAAAAC +
Preference number: 3 (lower is better)
Translates to: TPINCCQEAKSL*GNNKPTRLRQN
Trigger: GTTTTGCCTTAACCTCGTGGGTTTATTATTACCTCATAGGGACTTTGCCTCCTGACAGCAGTTTATGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 72 bp ACCCACGAGGTTAAGGCAAAACCCTACGGTTGTTTCTaGAAACAAATGTCCAGGAAACTCAAGTTTGTGATG +
Preference number: 3 (lower is better)
Translates to: THEVKAKPYGCF*KQMSRKLKFVM
Trigger: CATCACAAACTTGAGTTTCCTGGACATTTGTTTGCAGAAACAACCGTAGGGTTTTGCCTTAACCTCGTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 72 bp TTTGCTTTAGAGGACTACCTTCTTCCCAGTGTAGTCTaGCCAAAAAGTGGGTACATGACACAAGATAGCAGT +
Preference number: 3 (lower is better)
Translates to: FALEDYLLPSVV*PKSGYMTQDSS
Trigger: ACTGCTATCTTGTGTCATGTACCCACTTTTTGGCCAGACTACACTGGGAAGAAGGTAGTCCTCTAAAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 72 bp CTTTATTATTCATCTCAATTAACCATTGTGTTGGTCTaGACTTGGGGGTGCAGGCATTCCCATCTCCCTTTC +
Preference number: 3 (lower is better)
Translates to: LYYSSQLTIVLV*TWGCRHSHLPF
Trigger: GAAAGGGAGATGGGAATGCCTGCACCCCCAAGTCCAGACCAACACAATGGTTAATTGAGATGAATAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp GAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 3 (lower is better)
Translates to: ERMLIYSCPTLQRCTNDASILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...AGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp AAGAAATTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 3 (lower is better)
Translates to: KKFLHLQKSAYAIKYSQDALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...ATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp AAGGGGACAATCCAATGGGCTTATCACCACCCAATACTGAACACTATGACAGTTGAAAAGCATCATTCATaGCACTCGGTTTGTCCAACA +
Preference number: 3 (lower is better)
Translates to: KGTIQWAYHHPILNTMTVEKHHS*HSVCPT
Trigger: TGTTGGACAAACCGAGTGCAATGAATGATGCTTTTC...AACTGTCATAGTGTTCAGTATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 72 bp TCCCTCAAGCGGGTTGTGACGTCGTTGAAATTGCAATaGTCAAACTTCCAACACTTGTTATACACTTGTAAC +
Preference number: 3 (lower is better)
Translates to: SLKRVVTSLKLQ*SNFQHLLYTCN
Trigger: GTTACAAGTGTATAACAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGACGTCACAACCCGCTTGAGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651485.1
ENST00000652086.1
3UTR CCA 72 bp TATAAGCAGTGCCAGGGACAACTAGTAGGTGGTCATTaGAGTGTGGCTACAGTTATTATACAGTTACACATG +
Preference number: 3 (lower is better)
Translates to: YKQCQGQLVGGH*SVATVIIQLHM
Trigger: CATGTGTAACTGTATAATAACTGTAGCCACACTCCAATGACCACCTACTAGTTGTCCCTGGCACTGCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp AACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 3 (lower is better)
Translates to: NTGSLKFMKAFHVREDAHSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...ATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 3 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
3UTR-3UTR CAA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCTCAAACTTCCAACACTaGTTATACACTTGTAACCCC +
Preference number: 3 (lower is better)
Translates to: GSLKFMKAFHVREDAHILSNFQH*LYTCNP
Trigger: GGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGA...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652086.1
3UTR-3UTR CAA 90 bp ATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 3 (lower is better)
Translates to: IPEVYESVPCERGCSYTPPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...AGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 3 (lower is better)
Translates to: QVAQANFILSQQDPFGKYRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
3UTR GCA 72 bp CAGGTTCCTAACTACAAAATCCACGGGTTTAACTGCTaGTCTCCTGAAATGAAATATCTACAAGAAGTAGCA +
Preference number: 3 (lower is better)
Translates to: QVPNYKIHGFNC*SPEMKYLQEVA
Trigger: TGCTACTTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTAGTTAGGAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR GCA 72 bp ACCCAGGTTCCTAACTACAAAATCCACGGGTTTAACTaGTGCTCTCCTGAAATGAAATATCTACAAGAAGTA +
Preference number: 3 (lower is better)
Translates to: TQVPNYKIHGFN*CSPEMKYLQEV
Trigger: TACTTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTAGTTAGGAACCTGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CCA 72 bp AGTACTATAAATGTCTTTACATTACAGTATTGCCTTTaGGTCCAGGCACTCAACCTTGTCTATGGCATGAGT +
Preference number: 3 (lower is better)
Translates to: STINVFTLQYCL*VQALNLVYGMS
Trigger: ACTCATGCCATAGACAAGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAATGTAAAGACATTTATAGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp AAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTATTTTATACATCGATTTTCAGCCACTaGTACCTCTCTAAGTTTTCA +
Preference number: 3 (lower is better)
Translates to: KPQTSVSVLRAVTKVFYTSIFSH*YLSKFS
Trigger: TGAAAACTTAGAGAGGTACAAGTGGCTGAAAATCGA...TGTATAAAATACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp AAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTTTTGATGTCTTCTTTCAGTaGCTACCATTAAGCATACTG +
Preference number: 3 (lower is better)
Translates to: KSIIHCTRFVQQSIIKGFDVFFQ*LPLSIL
Trigger: CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATC...AAAACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR-3UTR CAA 90 bp CTGAATCTTGAGATTCATTCACTAGAATACACAGGGAAAAGGAAAAAGTTTGCCTCAAACTTCCAACACTaGTTATACACTTGTAACCCT +
Preference number: 3 (lower is better)
Translates to: LNLEIHSLEYTGKRKKFASNFQH*LYTCNP
Trigger: AGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGA...GGCAAACTTTTTCCTTTTCCCTGTGTATTCTAGTGAATGAATCTCAAGATTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS-3UTR GCA 90 bp AAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTGCCTCGAGCCGCTTCTaGGCTCAGCCCCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: KRKRTTQERGVWEKLSWCASSRF*AQPPHS
Trigger: AGAATGCGGGGGCTGAGCGCAGAAGCGGCTCGAGGC...ACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351554.8
CDS-3UTR TCA 90 bp AAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCGCAGGAGGCTGGCTCTaGCAGGAGGTTGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KWGFPANRTGLQSLPEPLAGGWL*QEVVCA
Trigger: GGCACAAACAACCTCCTGTCAGAGCCAGCCTCCTGC...GAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGCACCAGTGGGTTGGTTaGCAGGGGCTCTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: EKADYAGTGSLGEALLVLHQWVG*QGLLGL
Trigger: AAGGCCCAAGAGCCCCTGGCAACCAACCCACTGGTG...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAACACCAGTGGGTTGGTTaGCAGGGGCTCTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LRAAENPLKLSLQSWSSQHQWVG*QGLLGL
Trigger: AAGGCCCAAGAGCCCCTGGCAACCAACCCACTGGTG...TTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGGCAACAGAGAGAGACTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: QEKADYAGTGSLGEALLVATERD*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGTCTCTCTCTGTTGC...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527577.5
ENST00000651785.1
CDS-3UTR CCA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGGGGAGTACAGAGGCCTaGAAGATGAGGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWGSTEA*KMRELG
Trigger: ACCCAGCTCCCTCATCTTCCAGGCCTCTGTACTCCC...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCTGTCCTCCTCCTCTaGGGGGATGGGTATCAGCTT +
Preference number: 4 (lower is better)
Translates to: PSSGASLQTGLVFKVSQSPVLLL*GDGYQL
Trigger: AAGCTGATACCCATCCCCTCAGAGGAGGAGGACAGG...GCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR TCA 90 bp CTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAACCTTTGGCCACAGACTaGAGGCTGGCTGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: LRAAENPLKLSLQSWSSQPLATD*RLAALS
Trigger: TGACAGTGCAGCCAGCCTTCAGTCTGTGGCCAAAGG...TTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTCCTTTGGCCACAGACTaGAGGCTGGCTGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: KRKRTTQERGVWEKLSWCPLATD*RLAALS
Trigger: TGACAGTGCAGCCAGCCTTCAGTCTGTGGCCAAAGG...ACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTCAGCCATCAGATCCTaGCCAGGTGCTCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KWGFPANRTGLQSLPEPLSAIRS*PGAQPL
Trigger: AAGAGGCTGAGCACCTGGTCAGGATCTGATGGCTGA...GAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCCCTTTGAGCTCAGCTTaGGTCTCCTCAGGACTCAGC +
Preference number: 4 (lower is better)
Translates to: KWGFPANRTGLQSLPEPLPLSSA*VSSGLS
Trigger: GCTGAGTCCTGAGGAGACTCAAGCTGAGCTCAAAGG...GAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS-3UTR GCA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: ARESGLRRNGEFGRSSPGKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...ACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: EKADYAGTGSLGEALLVLKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: GLQRTHSSCHCKAGLPKSKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...GCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACCCAAGACTGTGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ESGLRRNGEFGRSSPGVDPRLCH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCACAGTCTTGG...GTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527577.5
ENST00000651785.1
CDS-3UTR GCA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAACCCAGTTCAGTCCCCTaGTGGGTGCATGCTACCCCC +
Preference number: 4 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPEPSSVP*WVHATP
Trigger: GGGGGTAGCATGCACCCAGCAGGGGACTGAACTGGG...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGGGATATGTCACAATTTaGCGTGCCCGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWGYVTI*RARWLW
Trigger: CCAGAGCCACCGGGCACGGCAAATTGTGACATATCC...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCACCCCCACTCCAGCTCTaGATCTGGACACACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SEGCREPTQAVTAKLVFPPPLQL*IWTHCQ
Trigger: CTGACAGTGTGTCCAGATGCAGAGCTGGAGTGGGGG...TGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTAATTGTCCACAGAACCTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLIVHRT*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGGTTCTGTGGACAAT...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS-3UTR CCA 90 bp CTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAACTCAGCCGGTGGCTGTaGGCATGGTCAGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: LRAAENPLKLSLQSWSSQLSRWL*AWSVLP
Trigger: AGGAAGTACTGACCATGCCCACAGCCACCGGCTGAG...TTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp ACCAGGTGCTCAGCCTCTTTAGGGATATGTCACAATTaGCCGTGCCCGGTGGCTCTGGGCAGCCTTTGGACA +
Preference number: 4 (lower is better)
Translates to: TRCSASLGICHN*PCPVALGSLWT
Trigger: TGTCCAAAGGCTGCCCAGAGCCACCGGGCACGGCAAATTGTGACATATCCCTAAAGAGGCTGAGCACCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: KADYAGTGSLGEALLVLTLQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...AGTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000652086.1
CDS-3UTR TCA 90 bp AGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: RAAENPLKLSLQSWSSQELQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...CTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CATGAGCTCCACTTATCTACTCATCAGGTGTTCCTTGCACCCCTAGCTCATCCCGCAGGAGGCTGGCTCTaGCAGGAGGTTGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: HELHLSTHQVFLAPLAHPAGGWL*QEVVCA
Trigger: GGCACAAACAACCTCCTGTCAGAGCCAGCCTCCTGC...GGGATGAGCTAGGGGTGCAAGGAACACCTGATGAGTAGATAAGTGGAGCTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: EKADYAGTGSLGEALLVLQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QEKADYAGTGSLGEALLVQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCACCAAGACTGTGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SEGCREPTQAVTAKLVFPPRLCH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCACAGTCTTGG...TGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651785.1
CDS-3UTR CCA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGGCTCTGGGCAGCCTTTaGACATGTAGTGGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: QEKADYAGTGSLGEALLVALGSL*TCSGCV
Trigger: GACACAACCACTACATGTCCAAAGGCTGCCCAGAGC...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAAGCCATGCCCCAGCTCTaGCCCACAGCACCATATACC +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQAMPQL*PTAPYT
Trigger: GGTATATGGTGCTGTGGGTCAGAGCTGGGGCATGGC...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR TCA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAGGAGTCAAGGCACACTaGATCCCTGGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQGVKAH*IPGPCP
Trigger: GGGGCATGGCCCAGGGATTCAGTGTGCCTTGACTCC...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR TCA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTGTCCTTACCTACAATaGACCATCACAGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: QEKADYAGTGSLGEALLVCPYLQ*TITGTH
Trigger: GTGGGTGCCTGTGATGGTTCATTGTAGGTAAGGACA...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTTCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LPSSGASLQTGLVFKVSQKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...CTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AGCTCTCCTGGTGTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSPGVDLGMKAPGCCQKWQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...CCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR GCA 90 bp GCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGTGAGAGGATTGCCTaGGGCCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: ACLHGNTGSLKFMKAFHVSERIA*GQPGQH
Trigger: ATGTTGCCCAGGCTGGCCGCAGGCAATCCTCTCACT...CACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533403.6
ENST00000652086.1
CDS-3UTR GCA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTCTGGAGTACCTGAGGTaGTGTTTGCCGGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPLEYLR*CLPGSL
Trigger: AAGGGAACCCGGCAAACAGCACCTCAGGTACTCCAG...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QEKADYAGTGSLGEALLVLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTTTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RESGLRRNGEFGRSSPGVFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...AACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCTTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: PSSGASLQTGLVFKVSQSFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...GCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGACAGCCTCCAAATTGTCACCCTAGCCTTCAGGGCAAGGCTGCACACACGGCCCACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: GQPPNCHPSLQGKAAHTAHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...GGCCGTGTGTGCAGCCTTGCCCTGAAGGCTAGGGTGACAATTTGGAGGCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGATTGTCCACAGAACCTaGAAGGAAGGGACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWIVHRT*KEGTGR
Trigger: CCTTCCTGTCCCTTCCTTCCAGGTTCTGTGGACAAT...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR CCA 90 bp GCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGATTGTCCACAGAACCTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: AFHVREDAHILLPHPPKMIVHRT*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGGTTCTGTGGACAAT...CATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS-3UTR CCA 90 bp TTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACCGGTGGCTGTGGGCATaGTCAGTACTTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FHVREDAHILLPHPPKMYRWLWA*SVLPQA
Trigger: GGCCTGAGGAAGTACTGACCATGCCCACAGCCACCG...GTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGCGACTCCTGGCTTTCTaGAGTGTGGCTGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQRLLAF*SVAEFP
Trigger: GGGGAATTCAGCCACACTCCAGAAAGCCAGGAGTCG...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTAGCCAGTAGGCATGACTaGTGTTCGATTCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLASRHD*CSIPNS
Trigger: GGAGTTAGGAATCGAACACCAGTCATGCCTACTGGC...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTTCCTACCCCTCTTCCTaGCAGGAGGCTGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SCHCKAGLPKSKGGSMQSSYPSS*QEAGSD
Trigger: GTCAGAGCCAGCCTCCTGCCAGGAAGAGGGGTAGGA...AGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGGAACCTTTCCCTCCCTaGGCTCCAAAGCACTATGTC +
Preference number: 4 (lower is better)
Translates to: RAAENPLKLSLQSWSSQEEPFPP*APKHYV
Trigger: GACATAGTGCTTTGGAGCCCAGGGAGGGAAAGGTTC...CTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGCTCTCTTTGGGGACATaGAGAGAGGTATTGAGCAAC +
Preference number: 4 (lower is better)
Translates to: EKADYAGTGSLGEALLVLLSLGT*REVLSN
Trigger: GTTGCTCAATACCTCTCTTCATGTCCCCAAAGAGAG...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395850.9
CDS-3UTR TCA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTACCTGTCCTCCTCCTCTaGGGGGATGGGTATCAGCTT +
Preference number: 4 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLPVLLL*GDGYQL
Trigger: AAGCTGATACCCATCCCCTCAGAGGAGGAGGACAGG...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR TCA 90 bp CAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGATTTAGGAGGCTGAAGTaGGAGGATTGCCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: QRTHSSCHCKAGLPKSKGFRRLK*EDCLRP
Trigger: TGGCCGCAGGCAATCCTCTCACTTCAGCCTCCTAAA...TCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533403.6
ENST00000652086.1
CDS-3UTR TCA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTACTGCCCTCATCACAATaGATGTCAGTCAGTACTAGC +
Preference number: 4 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLLPSSQ*MSVSTS
Trigger: GCTAGTACTGACTGACATTCATTGTGATGAGGGCAG...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CATGAGCTCCACTTATCTACTCATCAGGTGTTCCTTGCACCCCTAGCTCATCCCTCAGCCATCAGATCCTaGCCAGGTGCTCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HELHLSTHQVFLAPLAHPSAIRS*PGAQPL
Trigger: AAGAGGCTGAGCACCTGGTCAGGATCTGATGGCTGA...GGGATGAGCTAGGGGTGCAAGGAACACCTGATGAGTAGATAAGTGGAGCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CATGAGCTCCACTTATCTACTCATCAGGTGTTCCTTGCACCCCTAGCTCATCCCAGACTGAAGGCTGGCTaGACTGTCAGCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HELHLSTHQVFLAPLAHPRLKAG*TVSFPS
Trigger: ACTGGGGAAGCTGACAGTGCAGCCAGCCTTCAGTCT...GGGATGAGCTAGGGGTGCAAGGAACACCTGATGAGTAGATAAGTGGAGCTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGGATATGTCACAATTTaGCGTGCCCGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: REPTQAVTAKLVFPRAKEGYVTI*RARWLW
Trigger: CCAGAGCCACCGGGCACGGCAAATTGTGACATATCC...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGCCCCCACTCCAGCTCTaGATCTGGACACACTGTCAG +
Preference number: 4 (lower is better)
Translates to: MPPWQHGIPEVYESVPCEPPLQL*IWTHCQ
Trigger: CTGACAGTGTGTCCAGATGCAGAGCTGGAGTGGGGG...CTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: ESGLRRNGEFGRSSPGVDQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...GTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: EKADYAGTGSLGEALLVLQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCATTGTCCACAGAACCTaGAAGCTCTGGCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: PSSGASLQTGLVFKVSQSIVHRT*KLWLLT
Trigger: AGTGAGGAGCCAGAGCTTCCAGGTTCTGTGGACAAT...GCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395850.9
ENST00000652678.1
CDS-3UTR CCA 90 bp GTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGAGTCACCAGCAGCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VDLGMKAPGCCQKWSHQQPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...CTGCTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp AGCTCTCCTGGTGTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SSPGVDLGMKAPGCCQKWPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...CCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp AAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KADYAGTGSLGEALLVLTLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...AGTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp CCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSSGASLQTGLVFKVSQSLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...GCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAATTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: AAENPLKLSLQSWSSQEQFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...TTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLQRTHSSCHCKAGLPKSTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...GCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACCGGTGGCTGTGGGCATaGTCAGTACTTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYRWLWA*SVLPQA
Trigger: GGCCTGAGGAAGTACTGACCATGCCCACAGCCACCG...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGACACACATAAGACATaGGGGCTAACTGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: ARESGLRRNGEFGRSSPGDTHKT*GLTART
Trigger: TGTCCTTGCAGTTAGCCCCCATGTCTTATGTGTGTC...ACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTCACTCTTCCTGCTCTTaGACATCAGACTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KRKRTTQERGVWEKLSWCHSSCS*TSDSRF
Trigger: GAACCTGGAGTCTGATGTCCAAGAGCAGGAAGAGTG...ACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCAGGGAGTACAGAGGCCTaGAAGATGAGGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: FGMPPWQHGIPEVYESVPGSTEA*KMRELG
Trigger: ACCCAGCTCCCTCATCTTCCAGGCCTCTGTACTCCC...TGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCGTGTTGGTCTGGACTTaGGGGTGCAGGCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: TQAVTAKLVFPRAKEEACVLVWT*GCRHSH
Trigger: ATGGGAATGCCTGCACCCCCAAGTCCAGACCAACAC...GCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGATTTGCCGTGCCCGGTaGCTCTGGGCAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMICRAR*LWAAFG
Trigger: TCCAAAGGCTGCCCAGAGCCACCGGGCACGGCAAAT...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAATTTGCCGGGTTCCCTTaGTCCTCAGACTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPEFAGFP*SSDCSL
Trigger: AAGGGAGCAGTCTGAGGACCAAGGGAACCCGGCAAA...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp CTGCTCTTGGACATCAGACTCCAGGTTCTTCAGCCTTaGGAATCTAGGACTTGCACCAGTGGGTTGGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLLDIRLQVLQP*ESRTCTSGLVA
Trigger: GGCAACCAACCCACTGGTGCAAGTCCTAGATTCCAAAGGCTGAAGAACCTGGAGTCTGATGTCCAAGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTCCACAGAACTACTGTaGAGTAGGTCTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWSTELL*SRSQLL
Trigger: TAGGAGTTGAGACCTACTTCACAGTAGTTCTGTGGA...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351554.8
ENST00000651785.1
CDS-3UTR TCA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGCTTGGATTCCCATTGTaGTTGTCCACAGAACTACTG +
Preference number: 4 (lower is better)
Translates to: QEKADYAGTGSLGEALLVLGFPL*LSTELL
Trigger: CAGTAGTTCTGTGGACAATCACAATGGGAATCCAAG...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351554.8
ENST00000651785.1
CDS-3UTR TCA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNLQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGTGTCCACAGAACCCTTaGGTAGGCTCAGTCCCTATA +
Preference number: 4 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQCPQNP*VGSVPI
Trigger: TATAGGGACTGAGCCTACTCAAGGGTTCTGTGGACA...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445143.6
CDS-3UTR TCA 90 bp GAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACCTAGAATCTCAATCCTaGGAGAGGCTTCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: ESGLRRNGEFGRSSPGVDLESQS*ERLPKL
Trigger: CAGTTTTGGAAGCCTCTCTCAGGATTGAGATTCTAG...GTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACGTAGACTTGCTGACCTaGGGAGCTGAGTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: QKSSSSALRILLSLTDTHVDLLT*GAEWEA
Trigger: TGCTTCCCACTCAGCTCCTCAGGTCAGCAAGTCTAC...GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: SFKWGFPANRTGLQSLPEHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...CTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: ENPLKLSLQSWSSQEQRRHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...CCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGACAGCCTCCAAATTGTCACCCTAGCCTTCAGGGCAAGGCTGCACACACGGCCCACACATACCTGAACTaGCTTTCTACCAGTAACATT +
Preference number: 4 (lower is better)
Translates to: GQPPNCHPSLQGKAAHTAHTYLN*LSTSNI
Trigger: AATGTTACTGGTAGAAAGGCAGTTCAGGTATGTGTG...GGCCGTGTGTGCAGCCTTGCCCTGAAGGCTAGGGTGACAATTTGGAGGCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCGACACGAGAATCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CQKSSSSALRILLSLTDTDTRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTGCAAGCGATTCTCGTGTC...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651785.1
CDS-3UTR GCA 90 bp AAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCGTCAGTGGGGGTAAATaGATTGTGATTCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: KWGFPANRTGLQSLPEPLVSGGK*IVIHCR
Trigger: CCTACAGTGAATCACAATGCATTTACCCCCACTGAC...GAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGACTGAAGGCTGGCTaGACTGTCAGCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: MPPWQHGIPEVYESVPCERLKAG*TVSFPS
Trigger: ACTGGGGAAGCTGACAGTGCAGCCAGCCTTCAGTCT...CTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCTGTCACAATTTGCCGTaGCCGGTGGCTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFCHNLP*PVALGS
Trigger: GCTGCCCAGAGCCACCGGGCACGGCAAATTGTGACA...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTGTCACAATTTGCCGTaGCCGGTGGCTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRILLSLTDTHIWNIWHACHNLP*PVALGS
Trigger: GCTGCCCAGAGCCACCGGGCACGGCAAATTGTGACA...GGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCCTTGGTCCTCAGACTaGTCCCTTCAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSPWSSD*SLQRKH
Trigger: GTGCTTTCTCTGAAGGGAGCAGTCTGAGGACCAAGG...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCTGGAGTACCTGAGGTaGTGTTTGCCGGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: CQKSSSSALRILLSLTDTLEYLR*CLPGSL
Trigger: AAGGGAACCCGGCAAACAGCACCTCAGGTACTCCAG...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: QEKADYAGTGSLGEALLVFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: ESGLRRNGEFGRSSPGVDFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...GTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: EKADYAGTGSLGEALLVLFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGTTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: REPTQAVTAKLVFPRAKEFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGATCATGCCCTGCTATCTaGAACACTTCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: QRTHSSCHCKAGLPKSKGSCPAI*NTSPLP
Trigger: GGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGA...TCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGATTGTCCACAGAACCTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: EHLACLHGNTGSLKFMKAIVHRT*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGGTTCTGTGGACAAT...CGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS-3UTR CCA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATATTGTCCACAGAACCTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNIVHRT*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGGTTCTGTGGACAAT...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS-3UTR CCA 90 bp ATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGCGACTCCTGGCTTTCTaGAGTGTGGCTGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: MPPWQHGIPEVYESVPCERLLAF*SVAEFP
Trigger: GGGGAATTCAGCCACACTCCAGAAAGCCAGGAGTCG...CTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCGTAAATCCAGATGAGTaGAGGGCACAGGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: SLQTGLVFKVSQSPSILAVNPDE*RAQGIG
Trigger: GCCAATACCCTGTGCCCTCCACTCATCTGGATTTAC...GGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAAGTGTTGGTCTGGACTTaGGGGTGCAGGCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQVLVWT*GCRHSH
Trigger: ATGGGAATGCCTGCACCCCCAAGTCCAGACCAACAC...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTAGAGGCCAGGGTGTTTaGACAGCCTCCAAATTGTCA +
Preference number: 4 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPRGQGV*TASKLS
Trigger: TGACAATTTGGAGGCTGTCCAAACACCCTGGCCTCT...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCATTTGCCGTGCCCGGTaGCTCTGGGCAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFICRAR*LWAAFG
Trigger: TCCAAAGGCTGCCCAGAGCCACCGGGCACGGCAAAT...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGAACCTTTCCCTCCCTaGGCTCCAAAGCACTATGTC +
Preference number: 4 (lower is better)
Translates to: EPTQAVTAKLVFPRAKEEEPFPP*APKHYV
Trigger: GACATAGTGCTTTGGAGCCCAGGGAGGGAAAGGTTC...TTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: CERGCSYTPAPPSKDVLMLQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...CATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: TFGMPPWQHGIPEVYESVLQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EKADYAGTGSLGEALLVLNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SEGCREPTQAVTAKLVFPTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...TGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCGGAGTCAAGGCACACTaGATCCCTGGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: PSILARLLKLILFFPNRIGVKAH*IPGPCP
Trigger: GGGGCATGGCCCAGGGATTCAGTGTGCCTTGACTCC...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415002.7
ENST00000437761.6
CDS-3UTR TCA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAACTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPELGFPL*LSTEPG
Trigger: GCCAGGTTCTGTGGACAATCACAATGGGAATCCAAG...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS-3UTR TCA 90 bp CATGAGCTCCACTTATCTACTCATCAGGTGTTCCTTGCACCCCTAGCTCATCCCCTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: HELHLSTHQVFLAPLAHPLGFPL*LSTEPG
Trigger: GCCAGGTTCTGTGGACAATCACAATGGGAATCCAAG...GGGATGAGCTAGGGGTGCAAGGAACACCTGATGAGTAGATAAGTGGAGCTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642928.2
CDS-3UTR TCA 90 bp AAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTCTTGGATTCCCATTGTaGTTGTCCACAGAACCTGTA +
Preference number: 4 (lower is better)
Translates to: KRKRTTQERGVWEKLSWCLGFPL*LSTEPV
Trigger: TACAGGTTCTGTGGACAATCACAATGGGAATCCAAG...ACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527577.5
CDS-3UTR TCA 90 bp CTTCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGAACTCACATGAAATaGGCTTCTTTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LPSSGASLQTGLVFKVSQRTHMK*ASLLSR
Trigger: CCGGCTGAGCAAAGAAGCTCATTTCATGTGAGTTCT...CTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTCTAGAATCTCAATCCTaGGAGAGGCTTCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: GLPCKQDWSSKSPRAPLSLESQS*ERLPKL
Trigger: CAGTTTTGGAAGCCTCTCTCAGGATTGAGATTCTAG...AGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GTGCCACAATTTAAGGACCAAGCTATTCTGGGAAGCCCAGAACAGTCTTTCCTTCTTGGGTGGGGCTATTaGGAGTCAGCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: VPQFKDQAILGSPEQSFLLGWGY*ESAPAL
Trigger: CAGTGCTGGTGCTGACTCTCAATAGCCCCACCCAAG...AAGGAAAGACTGTTCTGGGCTTCCCAGAATAGCTTGGTCCTTAAATTGTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCCCTTTGGCCACAGACTaGAGGCTGGCTGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFPLATD*RLAALS
Trigger: TGACAGTGCAGCCAGCCTTCAGTCTGTGGCCAAAGG...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTTACACATGGATTCCTTaGTTCCCCATTAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPYTWIP*FPIKPW
Trigger: CCAGGGCTTAATGGGGAATCAAGGAATCCATGTGTA...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAATCAGCCATCAGATCCTaGCCAGGTGCTCAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQSAIRS*PGAQPL
Trigger: AAGAGGCTGAGCACCTGGTCAGGATCTGATGGCTGA...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGACAGCCTCCAAATTGTCACCCTAGCCTTCAGGGCAAGGCTGCACACACGGCCATGAAAGAACAGTCTTaGATTCAACTTCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GQPPNCHPSLQGKAAHTAMKEQS*IQLQQN
Trigger: GTTCTGCTGAAGTTGAATTCAAGACTGTTCTTTCAT...GGCCGTGTGTGCAGCCTTGCCCTGAAGGCTAGGGTGACAATTTGGAGGCTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCACTCCTACGTGTCCTTTaGGCTCAGCTTGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLSLTDTHIWNIWHASMALLRVL*AQLESP
Trigger: AGGAGACTCAAGCTGAGCTCAAAGGACACGTAGGAG...TGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS-3UTR GCA 90 bp AAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: KRKRTTQERGVWEKLSWCYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...ACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GLPCKQDWSSKSPRAPLSYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...AGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAATACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LRAAENPLKLSLQSWSSQYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...TTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: CERGCSYTPAPPSKDVLMKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...CATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTATGGGGACACTTGCTTaGTCTCTTTGGGGACATGAA +
Preference number: 4 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPMGTLA*SLWGHE
Trigger: TTCATGTCCCCAAAGAGAGCAAGCAAGTGTCCCCAT...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395850.9
CDS-3UTR GCA 90 bp TGTTCAGGGAACGGCATCAACAGAAGAAAGCTGGCACTGCTCAGGATGTCTTCTCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CSGNGINRRKLALLRMSSQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...AGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATGCCGTTCCCTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: EKADYAGTGSLGEALLVLLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCGTCACAGCAACTTTTTaGAGAAAGCAACCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GLQRTHSSCHCKAGLPKSVTATF*RKQPQS
Trigger: ACTTTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGAC...GCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCCCAGTTCAGTCCCCTaGTGGGTGCATGCTACCCCC +
Preference number: 4 (lower is better)
Translates to: EEACNLVQVTPTSLLDFFPSSVP*WVHATP
Trigger: GGGGGTAGCATGCACCCAGCAGGGGACTGAACTGGG...GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGCATATCCCAGTTCAGTCCCCTaGTGGGTGCATGCTACCCCC +
Preference number: 4 (lower is better)
Translates to: WHCSGCLLSVATIKHTAYPSSVP*WVHATP
Trigger: GGGGGTAGCATGCACCCAGCAGGGGACTGAACTGGG...ATATGCAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACCTCTCTAACCCAGCTTaGAGACGGCCTATTGTGCGA +
Preference number: 4 (lower is better)
Translates to: FHVREDAHILLPHPPKMYLSNPA*RRPIVR
Trigger: TCGCACAATAGGCCGTCTGCAAGCTGGGTTAGAGAG...GTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAGGGGACAATCCAATGGGCTTATCACCACCCAATACTGAACACTATGACAGTTCACCAGTGGGTTGGTTaGCAGGGGCTCTTGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KGTIQWAYHHPILNTMTVHQWVG*QGLLGL
Trigger: AAGGCCCAAGAGCCCCTGGCAACCAACCCACTGGTG...AACTGTCATAGTGTTCAGTATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGACTAGGTTTAGAAGGTaGAGAGACCAGGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQTRFRR*RDQGNF
Trigger: GAAGTTGCCCTGGTCTCTGCACCTTCTAAACCTAGT...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTCACACCTGAGAAGCTaGTTCTACGACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EHLACLHGNTGSLKFMKASHLRS*FYDLLR
Trigger: CCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGTGA...CGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTACATATGTATAAGCAGTaGCAGGGACAACTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLHMYKQ*QGQLVG
Trigger: ACCTACTAGTTGTCCCTGGCACTGCTTATACATATG...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: GLPCKQDWSSKSPRAPLSFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...AGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCATTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SEGCREPTQAVTAKLVFPFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...TGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: AFHVREDAHILLPHPPKMQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...CATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTTAGGGATGAAGCACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: RRNGEFGRSSPGVDLGMKHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...CTTCATCCCTAAGTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp AAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTCACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: KADYAGTGSLGEALLVLTHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...AGTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTCATGCCCTGCTATCTaGAACACTTCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: EHLACLHGNTGSLKFMKASCPAI*NTSPLP
Trigger: GGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGA...CGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAACCTCCTCTGAGGGGATaGGTATCAGCTTTGGTAATG +
Preference number: 4 (lower is better)
Translates to: EPTQAVTAKLVFPRAKEEPPLRG*VSALVM
Trigger: CATTACCAAAGCTGATACCCATCCCCTCAGAGGAGG...TTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR CCA 90 bp CCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTAAAACTGTCGACTCCTaGCTTTCTGGAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PTYGTFGMPPWQHGIPEVKTVDS*LSGVWL
Trigger: CAGCCACACTCCAGAAAGCCAGGAGTCGACAGTTTT...AACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCGAGGGCACAGGGTATTaGCTCTCGAGCAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFEGTGY*LSSREP
Trigger: TGGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTC...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGAGGACCAAGCTATTCTaGGAAGCCCAGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: AFHVREDAHILLPHPPKMRTKLF*EAQNSL
Trigger: AAGACTGTTCTGGGCTTCCCAGAATAGCTTGGTCCT...CATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCATCCTACCCCTCTTCCTaGCAGGAGGCTGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSSYPSS*QEAGSD
Trigger: GTCAGAGCCAGCCTCCTGCCAGGAAGAGGGGTAGGA...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTCCCATTAAGCCCTGGTaGATGAATGAGGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: GLPCKQDWSSKSPRAPLSPIKPW*MNEENA
Trigger: TGCATTTTCCTCATTCATCCACCAGGGCTTAATGGG...AGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: REPTQAVTAKLVFPRAKERGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: LQRTHSSCHCKAGLPKSKRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...TTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAAGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCAGCACCATATACCCTTaGGTAGGCTCAGTCCCTATA +
Preference number: 4 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSSTIYP*VGSVPI
Trigger: TATAGGGACTGAGCCTACTCAAGGGTATATGGTGCT...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415002.7
ENST00000437761.6
CDS-3UTR TCA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTACTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLLGFPL*LSTEPG
Trigger: GCCAGGTTCTGTGGACAATCACAATGGGAATCCAAG...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS-3UTR TCA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCACTTTAGGAGGCTaGAGTGAGAGGATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQSTLGG*SERIAC
Trigger: GCAGGCAATCCTCTCACTTCAGCCTCCTAAAGTGCT...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533403.6
ENST00000652086.1
CDS-3UTR TCA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCAAAAAGTGGGTACATaGCACAAGATAGCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPQKVGT*HKIAVS
Trigger: GCTTACTGCTATCTTGTGTCATGTACCCACTTTTTG...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTTATATGACCCTTGTTaGTTTGGACAGCTTAACAGC +
Preference number: 4 (lower is better)
Translates to: ESGLRRNGEFGRSSPGVDLYDPC*FGQLNS
Trigger: GCTGTTAAGCTGTCCAAATCAACAAGGGTCATATAA...GTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGCATATGCAGGAGGCTGGCTCTaGCAGGAGGTTGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: WHCSGCLLSVATIKHTAYAGGWL*QEVVCA
Trigger: GGCACAAACAACCTCCTGTCAGAGCCAGCCTCCTGC...ATATGCAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGTACACATGGATTCCTTaGTTCCCCATTAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CREPTQAVTAKLVFPRAKYTWIP*FPIKPW
Trigger: CCAGGGCTTAATGGGGAATCAAGGAATCCATGTGTA...CTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCGAGGCAAAGTCCCTATaGGGTAATAATAAACCCACG +
Preference number: 4 (lower is better)
Translates to: SLQTGLVFKVSQSPSILAEAKSL*GNNKPT
Trigger: CGTGGGTTTATTATTACCTCATAGGGACTTTGCCTC...GGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PKSKGGSMQSSSSHTYFTKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...AGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: HGIPEVYESVPCERGCSYKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: FHVREDAHILLPHPPKMYHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...GTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACAAAGGGTGTCCCCACTaGATTCATACTATATACACA +
Preference number: 4 (lower is better)
Translates to: ESGLRRNGEFGRSSPGVDKGCPH*IHTIYT
Trigger: TGTGTATATAGTATGAATGCAGTGGGGACACCCTTT...GTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGAGAAATTCCTCCATCTaGAAAAGTCAGCCTATGCCA +
Preference number: 4 (lower is better)
Translates to: RAAENPLKLSLQSWSSQERNSSI*KSQPMP
Trigger: TGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCT...CTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATTCTCAGTTTATAACTaGAGGCATAACTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLFSVYN*RHNCPV
Trigger: GACAGGACAGTTATGCCTGCAGTTATAAACTGAGAA...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR GCA 90 bp GGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTGTGGCACTCAGATTTTaGTTTAGAGGACTACCTTCT +
Preference number: 4 (lower is better)
Translates to: GLPCKQDWSSKSPRAPLSVALRF*FRGLPS
Trigger: AGAAGGTAGTCCTCTAAAGCAAAATCTGAGTGCCAC...AGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GAGCTTCTGAAAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTTCATCAGGTGTTCCTTaGACCCCTAGCTCATCCCCC +
Preference number: 4 (lower is better)
Translates to: ELLKASNICECAKSRYKGSSGVP*TPSSSP
Trigger: GGGGGATGAGCTAGGGGTGCAAGGAACACCTGATGA...ACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTTTCAGAAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAACTAGGTTTAGAAGGTaGAGAGACCAGGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: MKAFHVREDAHILLPHPPTRFRR*RDQGNF
Trigger: GAAGTTGCCCTGGTCTCTGCACCTTCTAAACCTAGT...TGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCACACCTGAGAAGCTaGTTCTACGACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KNNLRAAENPLKLSLQSWSHLRS*FYDLLR
Trigger: CCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGTGA...CCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTCATATGTATAAGCAGTaGCAGGGACAACTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: GLPCKQDWSSKSPRAPLSHMYKQ*QGQLVG
Trigger: ACCTACTAGTTGTCCCTGGCACTGCTTATACATATG...AGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCATGTCACAATTTGCCGTaGCCGGTGGCTCTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYACHNLP*PVALGS
Trigger: GCTGCCCAGAGCCACCGGGCACGGCAAATTGTGACA...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACAGGATATGTCACAATTTaGCGTGCCCGGTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTGYVTI*RARWLW
Trigger: CCAGAGCCACCGGGCACGGCAAATTGTGACATATCC...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACCCTTGGTCCTCAGACTaGTCCCTTCAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYPWSSD*SLQRKH
Trigger: GTGCTTTCTCTGAAGGGAGCAGTCTGAGGACCAAGG...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAACTGGAGTACCTGAGGTaGTGTTTGCCGGGTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TPAPPSKDVLMMLTDYIQLEYLR*CLPGSL
Trigger: AAGGGAACCCGGCAAACAGCACCTCAGGTACTCCAG...TTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAATTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: AAENPLKLSLQSWSSQEQFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...TTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCTCCTGGTGTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGAGTTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SPGVDLGMKAPGCCQKWSFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...ACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR CCA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EHLACLHGNTGSLKFMKAPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...CGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: CQKSSSSALRILLSLTDTPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTACCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LACLHGNTGSLKFMKAFHPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...ATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: NNLRAAENPLKLSLQSWSLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...AGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAACTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QKSSSSALRILLSLTDTHLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGTTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGAAGCTCTCCTGGTGTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAACACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: RSSPGVDLGMKAPGCCQKHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...TTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGGAGAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp TGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: CREPTQAVTAKLVFPRAKTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...CTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: EPTQAVTAKLVFPRAKEETDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...TTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTCATGCCCTGCTATCTaGAACACTTCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYSCPAI*NTSPLP
Trigger: GGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGA...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCATTCCATGCAGAGCTTaGAACACAACACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPIPCRA*NTTLLS
Trigger: ACTGAGAAGTGTTGTGTTCCAAGCTCTGCATGGAAT...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR CCA 90 bp CATACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGCGGTGGCTGTGGGCATaGTCAGTACTTCCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HTPADLLLLRMTFGSLKLRWLWA*SVLPQA
Trigger: GGCCTGAGGAAGTACTGACCATGCCCACAGCCACCG...CAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTCAGCCGGTGGCTGTaGGCATGGTCAGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: GSLKFMKAFHVREDAHILLSRWL*AWSVLP
Trigger: AGGAAGTACTGACCATGCCCACAGCCACCGGCTGAG...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTTCCCAGTGTAGTCTaGCCAAAAAGTGGGTACATG +
Preference number: 4 (lower is better)
Translates to: QTGLVFKVSQSPSILARLLPSVV*PKSGYM
Trigger: CATGTACCCACTTTTTGGCCAGACTACACTGGGAAG...CAACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCGACACACATAAGACATaGGGGCTAACTGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: TQAVTAKLVFPRAKEEACDTHKT*GLTART
Trigger: TGTCCTTGCAGTTAGCCCCCATGTCTTATGTGTGTC...GCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATGTGTTGGTCTGGACTTaGGGGTGCAGGCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: HGIPEVYESVPCERGCSYVLVWT*GCRHSH
Trigger: ATGGGAATGCCTGCACCCCCAAGTCCAGACCAACAC...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAAGAGGCCAGGGTGTTTaGACAGCCTCCAAATTGTCA +
Preference number: 4 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLRGQGV*TASKLS
Trigger: TGACAATTTGGAGGCTGTCCAAACACCCTGGCCTCT...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCCGTGCCCGGTGGCTCTaGGCAGCCTTTGGACATGTA +
Preference number: 4 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFRARWL*AAFGHV
Trigger: TACATGTCCAAAGGCTGCCCAGAGCCACCGGGCACG...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTCGTGCCCGGTGGCTCTaGGCAGCCTTTGGACATGTA +
Preference number: 4 (lower is better)
Translates to: IPEVYESVPCERGCSYTPRARWL*AAFGHV
Trigger: TACATGTCCAAAGGCTGCCCAGAGCCACCGGGCACG...AGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp ATCATATATAGGATCAGCCTACTGGGGTTGGCCACGTaGTATGTAGCTGCGAATAGCAAGGAGGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: IIYRISLLGLAT*YVAANSKEGNS
Trigger: GCTGTTCCCCTCCTTGCTATTCGCAGCTACATACAACGTGGCCAACCCCAGTAGGCTGATCCTATATATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp CCAGCACTGATCATATATAGGATCAGCCTACTGGGGTaGGCCACGTTGTATGTAGCTGCGAATAGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PALIIYRISLLG*ATLYVAANSKE
Trigger: CTCCTTGCTATTCGCAGCTACATACAACGTGGCCAACCCCAGTAGGCTGATCCTATATATGATCAGTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp GCTGAGTCTTCTGGCTTTCTTCCACTCTTCCTGCTCTaGGACATCAGACTCCAGGTTCTTCAGCCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: AESSGFLPLFLL*DIRLQVLQPLE
Trigger: TTCCAAAGGCTGAAGAACCTGGAGTCTGATGTCCAAGAGCAGGAAGAGTGGAAGAAAGCCAGAAGACTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp CAGATGAGAAAACTGAGGCATGTAAGGTTAAGTAACTaGCCTGAGGGTCGCCGATTAGCATCAGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: QMRKLRHVRLSN*PEGRRLASEPA
Trigger: TGCCGGCTCTGATGCTAATCGGCGACCCTCAGGCAAGTTACTTAACCTTACATGCCTCAGTTTTCTCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ENPLKLSLQSWSSQEQRRNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...CCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTCTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: PHMEHLACLHGNTGSLKFLGFPL*LSTEPG
Trigger: TCCAGGTTCTGTGGACAATCACAATGGGAATCCAAG...AAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000652678.1
CDS-3UTR TCA 90 bp ATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: MKAFHVREDAHILLPHPPTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...TGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 4 (lower is better)
Translates to: VPCERGCSYTPAPPSKDVLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...TACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 4 (lower is better)
Translates to: CHCKAGLPKSKGGSMQSSGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...ACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 4 (lower is better)
Translates to: CERGCSYTPAPPSKDVLMGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...CATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 4 (lower is better)
Translates to: TFGMPPWQHGIPEVYESVGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGCACCATATACCCTTaGGTAGGCTCAGTCCCTATA +
Preference number: 4 (lower is better)
Translates to: SCHCKAGLPKSKGGSMQSSTIYP*VGSVPI
Trigger: TATAGGGACTGAGCCTACTCAAGGGTATATGGTGCT...AGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR TCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAACTTGGATTCCCATTGTaGTTGTCCACAGAACCCTTG +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQLGFPL*LSTEPL
Trigger: CAAGGGTTCTGTGGACAATCACAATGGGAATCCAAG...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445143.6
CDS-3UTR TCA 90 bp CCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTCTGCCCTCATCACAATaGATGTCAGTCAGTACTAGC +
Preference number: 4 (lower is better)
Translates to: PHMEHLACLHGNTGSLKFLPSSQ*MSVSTS
Trigger: GCTAGTACTGACTGACATTCATTGTGATGAGGGCAG...AAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGTCCTCTTGTGTAAAGTaGGGTGCAAGTACAGATGAA +
Preference number: 4 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQSSCVK*GASTDE
Trigger: TTCATCTGTACTTGCACCTCACTTTACACAAGAGGA...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAACTCAAGTGCCACAATaGACACCCATAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: LQRTHSSCHCKAGLPKSKTQVPQ*TPINCC
Trigger: ACAGCAGTTTATGGGTGTTCATTGTGGCACTTGAGT...TTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: AKEEACNLVQVTPTSLLDKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...GTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: LENIKPLECGSKRKRTTQKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: VTSRRTVFSDKDVPPFSSKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...GCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR GCA 90 bp AAGGGGACAATCCAATGGGCTTATCACCACCCAATACTGAACACTATGACAGTTAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: KGTIQWAYHHPILNTMTVKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...AACTGTCATAGTGTTCAGTATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTGCCAGAAATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPEMESPAEELFSLIRMSQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...GGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCATTTCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR GCA 90 bp CCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGACAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PPSKDVLMMLTDYIQGARQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...TCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: SLQTGLVFKVSQSPSILAAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...GGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: CHCKAGLPKSKGGSMQSSHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...ACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: ILLSLTDTHIWNIWHASMHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...CATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TFGMPPWQHGIPEVYESVHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTTCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGAAATTCCTCCATCTaGAAAAGTCAGCCTATGCCA +
Preference number: 4 (lower is better)
Translates to: LPSSGASLQTGLVFKVSQRNSSI*KSQPMP
Trigger: TGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCT...CTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCTTCTCAGTTTATAACTaGAGGCATAACTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSSGASLQTGLVFKVSQSFSVYN*RHNCPV
Trigger: GACAGGACAGTTATGCCTGCAGTTATAAACTGAGAA...GCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR GCA 90 bp GCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACCTAGCTCCAGCCAGCTaGTCAGCCCATCAAGAATCC +
Preference number: 4 (lower is better)
Translates to: AKEEACNLVQVTPTSLLDLAPAS*SAHQES
Trigger: GGATTCTTGATGGGCTGAGCAGCTGGCTGGAGCTAG...GTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: FHVREDAHILLPHPPKMYQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...GTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: LACLHGNTGSLKFMKAFHQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...ATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCAGAACCTGGAAGCTCTaGCTCCTCACTGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: AGLPKSKGGSMQSSSSHTRTWKL*LLTVRS
Trigger: ACTTCTTACAGTGAGGAGCCAGAGCTTCCAGGTTCT...GGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395850.9
ENST00000652678.1
CDS-3UTR CCA 90 bp TGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: CERGCSYTPAPPSKDVLMLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...CATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCHCKAGLPKSKGGSMQSTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...AGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CTTCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGCTCTGTAACTGTGTGTaGCAAAGCCAAGATATCCTA +
Preference number: 4 (lower is better)
Translates to: LPSSGASLQTGLVFKVSQLCNCV*QSQDIL
Trigger: TAGGATATCTTGGCTTTGCCACACACAGTTACAGAG...CTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCCTCTGTAACTGTGTGTaGCAAAGCCAAGATATCCTA +
Preference number: 4 (lower is better)
Translates to: SLQTGLVFKVSQSPSILALCNCV*QSQDIL
Trigger: TAGGATATCTTGGCTTTGCCACACACAGTTACAGAG...GGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGTTAGCAGGAGGCTaGATGCAGATGGTAAAACAT +
Preference number: 4 (lower is better)
Translates to: CREPTQAVTAKLVFPRAKELAGG*MQMVKH
Trigger: ATGTTTTACCATCTGCATCCAGCCTCCTGCTAACTC...CTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCGCAACAGAGAGAGACTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: PSILARLLKLILFFPNRIATERD*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGTCTCTCTCTGTTGC...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651785.1
CDS-3UTR CCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGAGGGCACAGGGTATTaGCTCTCGAGCAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAEGTGY*LSSREP
Trigger: TGGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTC...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAAGGGGACAATCCAATaGGCTTATCACCACCCAATA +
Preference number: 4 (lower is better)
Translates to: ACLHGNTGSLKFMKAFHVKGTIQ*AYHHPI
Trigger: TATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT...CACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCAAGGGGACAATCCAATaGGCTTATCACCACCCAATA +
Preference number: 4 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSKGTIQ*AYHHPI
Trigger: TATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGATAGGATCAGCCTACTaGGGTTGGCCACGTTGTATG +
Preference number: 4 (lower is better)
Translates to: KNNLRAAENPLKLSLQSWIGSAY*GWPRCM
Trigger: CATACAACGTGGCCAACCCCAGTAGGCTGATCCTAT...CCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGGAAGTCTCAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATGGGAGTACAGAGGCCTaGAAGATGAGGGAGCTGGGT +
Preference number: 4 (lower is better)
Translates to: WKSQTVTTKGVPTAFILYGSTEA*KMRELG
Trigger: ACCCAGCTCCCTCATCTTCCAGGCCTCTGTACTCCC...ATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTGAGACTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGAGAGGCCAGGGTGTTTaGACAGCCTCCAAATTGTCA +
Preference number: 4 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMRGQGV*TASKLS
Trigger: TGACAATTTGGAGGCTGTCCAAACACCCTGGCCTCT...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTGTGGTCATTGGAGTGTaGCTACAGTTATTATACAGT +
Preference number: 4 (lower is better)
Translates to: GLPCKQDWSSKSPRAPLSVVIGV*LQLLYS
Trigger: ACTGTATAATAACTGTAGCCACACTCCAATGACCAC...AGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GTGCCACAATTTAAGGACCAAGCTATTCTGGGAAGCCCAGAACAGTCTTTCCTTGCTCTGGGCAGCCTTTaGACATGTAGTGGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: VPQFKDQAILGSPEQSFLALGSL*TCSGCV
Trigger: GACACAACCACTACATGTCCAAAGGCTGCCCAGAGC...AAGGAAAGACTGTTCTGGGCTTCCCAGAATAGCTTGGTCCTTAAATTGTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAACGTGCCCGGTGGCTCTaGGCAGCCTTTGGACATGTA +
Preference number: 4 (lower is better)
Translates to: SKDVLMMLTDYIQGARGKRARWL*AAFGHV
Trigger: TACATGTCCAAAGGCTGCCCAGAGCCACCGGGCACG...TTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACAGAACCTTTCCCTCCCTaGGCTCCAAAGCACTATGTC +
Preference number: 4 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTEPFPP*APKHYV
Trigger: GACATAGTGCTTTGGAGCCCAGGGAGGGAAAGGTTC...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp CCCTGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTaGTTGTCCCTGACTGACACCCACATATGGAACATT +
Preference number: 4 (lower is better)
Translates to: PCQKSSSSALRI*LSLTDTHIWNI
Trigger: AATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CAA 72 bp TATGGCCACTATGGTGGTAGACACTGTCTACCTTGTTaGCTGAGTCTTCTGGCTTTCTTCCACTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YGHYGGRHCLPC*LSLLAFFHSSC
Trigger: GCAGGAAGAGTGGAAGAAAGCCAGAAGACTCAGCAAACAAGGTAGACAGTGTCTACCACCATAGTGGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATTCCACAGAACTACTGTaGAGTAGGTCTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNSTELL*SRSQLL
Trigger: TAGGAGTTGAGACCTACTTCACAGTAGTTCTGTGGA...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651785.1
CDS-3UTR TCA 90 bp GGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCTCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSMQSSSSHTYFTLRLLPLQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...AGGAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SRRTVFSDKDVPPFSSCSLQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...CGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR TCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCACTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYALQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: EPTQAVTAKLVFPRAKEENQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...TTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACAGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 4 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGATATACACACATACCTaGACTGCCTTTCTACCAGTA +
Preference number: 4 (lower is better)
Translates to: SFKWGFPANRTGLQSLPEIYTHT*TAFLPV
Trigger: TACTGGTAGAAAGGCAGTTCAGGTATGTGTGTATAT...CTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCGGCCAAGAAGGCTTCTaGGAGGAACATTTACAGGGG +
Preference number: 4 (lower is better)
Translates to: GSLKFMKAFHVREDAHILGQEGF*EEHLQG
Trigger: CCCCTGTAAATGTTCCTCTCAGAAGCCTTCTTGGCC...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR TCA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTTAGGAGGCTGAAGTaGGAGGATTGCCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFFRRLK*EDCLRP
Trigger: TGGCCGCAGGCAATCCTCTCACTTCAGCCTCCTAAA...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533403.6
ENST00000652086.1
CDS-3UTR TCA 90 bp CAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTGTGTAAGGAAAGACACTaGGCTAACAGAGAACACAGA +
Preference number: 4 (lower is better)
Translates to: QTGLVFKVSQSPSILARLCKERH*ANREHR
Trigger: TCTGTGTTCTCTGTTAGCTCAGTGTCTTTCCTTACA...CAACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTTTATATGACCCTTGTTaGTTTGGACAGCTTAACAGC +
Preference number: 4 (lower is better)
Translates to: GFPANRTGLQSLPEPLYLLYDPC*FGQLNS
Trigger: GCTGTTAAGCTGTCCAAATCAACAAGGGTCATATAA...AAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAAACCTTGTCTATGGCATaGGTCACAGCAACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQTLSMA*VTATFC
Trigger: GCAAAAAGTTGCTGTGACTCATGCCATAGACAAGGT...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTAATATACCCATACCTTaGAGCCCCCAGTACATTCAA +
Preference number: 4 (lower is better)
Translates to: PTYGTFGMPPWQHGIPEVNIPIP*SPQYIQ
Trigger: TTGAATGTACTGGGGGCTTCAAGGTATGGGTATATT...AACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCGTAGACTTGCTGACCTaGGGAGCTGAGTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: EEACNLVQVTPTSLLDFFVDLLT*GAEWEA
Trigger: TGCTTCCCACTCAGCTCCTCAGGTCAGCAAGTCTAC...GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCTGTCCTTACCTACAATaGACCATCACAGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: SQSPSILARLLKLILFFPCPYLQ*TITGTH
Trigger: GTGGGTGCCTGTGATGGTTCATTGTAGGTAAGGACA...GGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATACTTGGGTGGGGCTATTaGGAGTCAGCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: QTVTTKGVPTAFILYTHILGWGY*ESAPAL
Trigger: CAGTGCTGGTGCTGACTCTCAATAGCCCCACCCAAG...TATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGGAGGCAAAGTCCCTATaGGGTAATAATAAACCCACG +
Preference number: 4 (lower is better)
Translates to: MPPWQHGIPEVYESVPCEEAKSL*GNNKPT
Trigger: CGTGGGTTTATTATTACCTCATAGGGACTTTGCCTC...CTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: MPPWQHGIPEVYESVPCEYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...CTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAACCAAGGCTCCAGGCTGCTaGCAGAAATGGAGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PCRSVVIKDDLWKSQTVTKAPGC*QKWSHQ
Trigger: CTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTT...GGTTACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LENIKPLECGSKRKRTTQQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTCACACATACCTGAACTaGCTTTCTACCAGTAACATT +
Preference number: 4 (lower is better)
Translates to: GFPANRTGLQSLPEPLYLHTYLN*LSTSNI
Trigger: AATGTTACTGGTAGAAAGGCAGTTCAGGTATGTGTG...AAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCACACATACCTGAACTaGCTTTCTACCAGTAACATT +
Preference number: 4 (lower is better)
Translates to: SFKWGFPANRTGLQSLPEHTYLN*LSTSNI
Trigger: AATGTTACTGGTAGAAAGGCAGTTCAGGTATGTGTG...CTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGACACGAGAATCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYADTRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTGCAAGCGATTCTCGTGTC...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527577.5
ENST00000651785.1
CDS-3UTR GCA 90 bp TGGAAGTCTCAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATCTAGCTCCAGCCAGCTaGTCAGCCCATCAAGAATCC +
Preference number: 4 (lower is better)
Translates to: WKSQTVTTKGVPTAFILYLAPAS*SAHQES
Trigger: GGATTCTTGATGGGCTGAGCAGCTGGCTGGAGCTAG...ATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTGAGACTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCGTCCTGTTCACCTCATaGTATTGGGTAACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AGLPKSKGGSMQSSSSHTVLFTS*YWVTFQ
Trigger: CTGGAAAGTTACCCAATAGCATGAGGTGAACAGGAC...GGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCCTTGGTCCTCAGACTaGTCCCTTCAGAGAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SALRILLSLTDTHIWNIWPWSSD*SLQRKH
Trigger: GTGCTTTCTCTGAAGGGAGCAGTCTGAGGACCAAGG...CCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTACTGGTGCTAAAGACTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: NGVTSRRTVFSDKDVPPFTGAKD*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGTCTTTAGCACCAGT...AAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643183.1
CDS-3UTR CCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTC +
Preference number: 4 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMRTDPP*IPIVIV
Trigger: GACAATCACAATGGGAATCCAAGGAGGGTCTGTCCT...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: CQKSSSSALRILLSLTDTFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAACCCATTACGTGAATGCCTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: PCRSVVIKDDLWKSQTVTHYVNA*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGGCATTCACGTAATG...GGTTACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395850.9
CDS-3UTR CCA 90 bp GAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGCTTGCTTGCTCTCTTTaGGGACATGAAGAGAGGTAT +
Preference number: 4 (lower is better)
Translates to: EHLACLHGNTGSLKFMKALACSL*GHEERY
Trigger: ATACCTCTCTTCATGTCCCCAAAGAGAGCAAGCAAG...CGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395850.9
CDS-3UTR CCA 90 bp AGCCCATCAAGAATCCCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGAGAACCTGGAAGCTCTaGCTCCTCACTGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SPSRIPQGDLLALVQICWRTWKL*LLTVRS
Trigger: ACTTCTTACAGTGAGGAGCCAGAGCTTCCAGGTTCT...CCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGGGATTCTTGATGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652678.1
CDS-3UTR CCA 90 bp TTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LRILLSLTDTHIWNIWHAPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...GGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGTTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: LENIKPLECGSKRKRTTQFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCTTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GSLKFMKAFHVREDAHILFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: VPCERGCSYTPAPPSKDVHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...TACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: CHCKAGLPKSKGGSMQSSTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...ACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTCATGCCCTGCTATCTaGAACACTTCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: VTSRRTVFSDKDVPPFSSSCPAI*NTSPLP
Trigger: GGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGA...GCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp ATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCACTCTGTAACTGTGTGTaGCAAAGCCAAGATATCCTA +
Preference number: 4 (lower is better)
Translates to: MKAFHVREDAHILLPHPPLCNCV*QSQDIL
Trigger: TAGGATATCTTGGCTTTGCCACACACAGTTACAGAG...TGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCATTCCATGCAGAGCTTaGAACACAACACTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSIPCRA*NTTLLS
Trigger: ACTGAGAAGTGTTGTGTTCCAAGCTCTGCATGGAAT...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR CCA 90 bp TACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTACTCAGCCGGTGGCTGTaGGCATGGTCAGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: YPCRSVVIKDDLWKSQTVLSRWL*AWSVLP
Trigger: AGGAAGTACTGACCATGCCCACAGCCACCGGCTGAG...TACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATAAAACTGTCGACTCCTaGCTTTCTGGAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NTGSLKFMKAFHVREDAHKTVDS*LSGVWL
Trigger: CAGCCACACTCCAGAAAGCCAGGAGTCGACAGTTTT...ATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTCTTCCCAGTGTAGTCTaGCCAAAAAGTGGGTACATG +
Preference number: 4 (lower is better)
Translates to: ERMLIYSCPTLQRCTNDALPSVV*PKSGYM
Trigger: CATGTACCCACTTTTTGGCCAGACTACACTGGGAAG...AGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCTTACAGTATTGCCTTTaGGTCCAGGCACTCAACCTT +
Preference number: 4 (lower is better)
Translates to: CQKSSSSALRILLSLTDTLQYCL*VQALNL
Trigger: AAGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAA...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCGCCAGTAGGCATGACTaGTGTTCGATTCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: PRAKEEACNLVQVTPTSLASRHD*CSIPNS
Trigger: GGAGTTAGGAATCGAACACCAGTCATGCCTACTGGC...GAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTGAGGGCACAGGGTATTaGCTCTCGAGCAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: KGGSMQSSSSHTYFTLRLEGTGY*LSSREP
Trigger: TGGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTC...AAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCATAGGATCAGCCTACTaGGGTTGGCCACGTTGTATG +
Preference number: 4 (lower is better)
Translates to: LRILLSLTDTHIWNIWHAIGSAY*GWPRCM
Trigger: CATACAACGTGGCCAACCCCAGTAGGCTGATCCTAT...GGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGACCATTGTGTTGGTCTaGACTTGGGGGTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LENIKPLECGSKRKRTTQTIVLV*TWGCRH
Trigger: ATGCCTGCACCCCCAAGTCCAGACCAACACAATGGT...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATCCTACCCCTCTTCCTaGCAGGAGGCTGGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SQVAQANFILSQQDPFGKSYPSS*QEAGSD
Trigger: GTCAGAGCCAGCCTCCTGCCAGGAAGAGGGGTAGGA...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGTTCCCCATTAAGCCCTaGTGGATGAATGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: REPTQAVTAKLVFPRAKEFPIKP*WMNEEN
Trigger: ATTTTCCTCATTCATCCACCAGGGCTTAATGGGGAA...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAACTAGTAGGTGGTCATTaGAGTGTGGCTACAGTTATT +
Preference number: 4 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPELVGGH*SVATVI
Trigger: AATAACTGTAGCCACACTCCAATGACCACCTACTAG...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGGCTCTGGGCAGCCTTTaGACATGTAGTGGTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LENIKPLECGSKRKRTTQALGSL*TCSGCV
Trigger: GACACAACCACTACATGTCCAAAGGCTGCCCAGAGC...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATACCTTTGCCGGGTTCCCTTaGTCCTCAGACTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: NCNHKGCPHCIHTIYTHTFAGFP*SSDCSL
Trigger: AAGGGAGCAGTCTGAGGACCAAGGGAACCCGGCAAA...GGTATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTACTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: YPCRSVVIKDDLWKSQTVLQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...TACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SCHCKAGLPKSKGGSMQSNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...AGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATCTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: HGIPEVYESVPCERGCSYLGFPL*LSTEPG
Trigger: TCCAGGTTCTGTGGACAATCACAATGGGAATCCAAG...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000652678.1
CDS-3UTR TCA 90 bp AACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: NTGSLKFMKAFHVREDAHRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...ATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCCTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 4 (lower is better)
Translates to: PRAKEEACNLVQVTPTSLLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...GAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGACTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 4 (lower is better)
Translates to: PPSKDVLMMLTDYIQGARLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...TCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGCAGCAACAGAAACTACTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 4 (lower is better)
Translates to: PQGDLLALVQICWQQQKLLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...TAGTTTCTGTTGCTGCCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 4 (lower is better)
Translates to: AKEEACNLVQVTPTSLLDGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...GTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTACACAGGTTTAGGAGGCTGAAGTaGGAGGATTGCCTGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FSDKDVPPFSSCSLKLHRFRRLK*EDCLRP
Trigger: TGGCCGCAGGCAATCCTCTCACTTCAGCCTCCTAAA...CCTGTGTAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR TCA 90 bp AGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGAGCACTTTAGGAGGCTaGAGTGAGAGGATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRRTVFSDKDVPPFSSCSSTLGG*SERIAC
Trigger: GCAGGCAATCCTCTCACTTCAGCCTCCTAAAGTGCT...CGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR TCA 90 bp GAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGTTAAGGCCATTTATATaGCCCTTGTTGATTTGGACA +
Preference number: 4 (lower is better)
Translates to: ENPLKLSLQSWSSQEQRRLRPFI*PLLIWT
Trigger: TGTCCAAATCAACAAGGGTCATATAAATGGCCTTAA...CCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGTTTCAGGAAATACCATaGGCTCCACTTATCTACTCA +
Preference number: 4 (lower is better)
Translates to: ACLHGNTGSLKFMKAFHVFQEIP*APLIYS
Trigger: TGAGTAGATAAGTGGAGCTCATGGTATTTCCTGAAA...CACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTGGTAGACATAGAAAGTaGAAGTTCAGAAAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: GFPANRTGLQSLPEPLYLGRHRK*KFRKGL
Trigger: TAAACCCTTTCTGAACTTTCACTTTCTATGTCTACC...AAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGCTTCTGAAAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTAGTCAGCACCAGCACTaGTCATATATAGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: ELLKASNICECAKSRYKGSQHQH*SYIGSA
Trigger: GGCTGATCCTATATATGATCAGTGCTGGTGCTGACT...ACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTTTCAGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACAAGTCAGCACCAGCACTaGTCATATATAGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTSQHQH*SYIGSA
Trigger: GGCTGATCCTATATATGATCAGTGCTGGTGCTGACT...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTATTTTATACACTTGGGTGGGGCTATTaGGAGTCAGCACCAGCACTG +
Preference number: 4 (lower is better)
Translates to: KPQTSVSVLRAVTKVFYTLGWGY*ESAPAL
Trigger: CAGTGCTGGTGCTGACTCTCAATAGCCCCACCCAAG...TGTATAAAATACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGAACAGAAGCTTACACTaGGAATTTATTGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: REPTQAVTAKLVFPRAKENRSLH*EFIGGL
Trigger: AAGCCCTCCAATAAATTCTCAGTGTAAGCTTCTGTT...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCAACAGAAGCTTACACTaGGAATTTATTGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSNRSLH*EFIGGL
Trigger: AAGCCCTCCAATAAATTCTCAGTGTAAGCTTCTGTT...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATTACACATGGATTCCTTaGTTCCCCATTAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: NTGSLKFMKAFHVREDAHYTWIP*FPIKPW
Trigger: CCAGGGCTTAATGGGGAATCAAGGAATCCATGTGTA...ATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTATGAAAGAACAGTCTTaGATTCAACTTCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPMKEQS*IQLQQN
Trigger: GTTCTGCTGAAGTTGAATTCAAGACTGTTCTTTCAT...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGACTCAAGTGCCACAATaGACACCCATAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMTQVPQ*TPINCC
Trigger: ACAGCAGTTTATGGGTGTTCATTGTGGCACTTGAGT...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAATCGTTGAAATTGCAATaGTCAAACTTCCAACACTTG +
Preference number: 4 (lower is better)
Translates to: AAENPLKLSLQSWSSQEQSLKLQ*SNFQHL
Trigger: CAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGA...TTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTCAAGTGGGGCTTCCCTaGAAACAGGACTGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NGVTSRRTVFSDKDVPPFQVGLP*KQDWSS
Trigger: TGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTG...AAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR GCA 90 bp GAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: EHLACLHGNTGSLKFMKAAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...CGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: LLSLTDTHIWNIWHASMAAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...TGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: HGIPEVYESVPCERGCSYMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: CKAGLPKSKGGSMQSSSSMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...ACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: CQKSSSSALRILLSLTDTLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AGAAGCTCTCCTGGTGTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAACACACCATTGATGTATaGTATTACACTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSSPGVDLGMKAPGCCQKHTIDV*YYTFPV
Trigger: CACTGGAAAAGTGTAATAGCATACATCAATGGTGTG...TTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGGAGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651485.1
ENST00000652086.1
CDS-3UTR GCA 90 bp ATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCACACACATACCTGAACTaGCTTTCTACCAGTAACATT +
Preference number: 4 (lower is better)
Translates to: MKAFHVREDAHILLPHPPHTYLN*LSTSNI
Trigger: AATGTTACTGGTAGAAAGGCAGTTCAGGTATGTGTG...TGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATTTTACATTACAGTATTaGCTTTGGGTCCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: LACLHGNTGSLKFMKAFHFTLQY*LWVQAL
Trigger: GAGTGCCTGGACCCAAAGGCAATACTGTAATGTAAA...ATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCCTGGAGTACCTGGGGTaGTGTTTGCCTAGTACTATA +
Preference number: 4 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFLEYLG*CLPSTI
Trigger: TATAGTACTAGGCAAACAGCACCCCAGGTACTCCAG...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATATCATCAGGTGTTCCTTaGACCCCTAGCTCATCCCCC +
Preference number: 4 (lower is better)
Translates to: QTVTTKGVPTAFILYTHISSGVP*TPSSSP
Trigger: GGGGGATGAGCTAGGGGTGCAAGGAACACCTGATGA...TATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCATCCACGGGTTTAACTaGTGCTCTCCTGAAATGAAA +
Preference number: 4 (lower is better)
Translates to: AGLPKSKGGSMQSSSSHTIHGFN*CSPEMK
Trigger: TTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGAT...GGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCAAGACTGAAGGCTGGCTaGACTGTCAGCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LYLSQVAQANFILSQQDPRLKAG*TVSFPS
Trigger: ACTGGGGAAGCTGACAGTGCAGCCAGCCTTCAGTCT...TGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: VFPRAKEEACNLVQVTPTQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...AGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SALRILLSLTDTHIWNIWPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...CCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAACACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: TFGMPPWQHGIPEVYESVHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCCAGAAATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCAACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: ARNGVTSRRTVFSDKDVPTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...TGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCATTTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp ATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTTCATGCCCTGCTATCTaGAACACTTCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: IPEVYESVPCERGCSYTPSCPAI*NTSPLP
Trigger: GGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGA...AGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTTCATGCCCTGCTATCTaGAACACTTCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLSCPAI*NTSPLP
Trigger: GGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGA...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAACTCTGTAACTGTGTGTaGCAAAGCCAAGATATCCTA +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQLCNCV*QSQDIL
Trigger: TAGGATATCTTGGCTTTGCCACACACAGTTACAGAG...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACAGTAAAAAGAACCTTGAGTTTCCCAGTTCAGTCCCCTGCTGGGTGCATGCTAGAGTTAGCAGGAGGCTaGATGCAGATGGTAAAACAT +
Preference number: 4 (lower is better)
Translates to: TVKRTLSFPVQSPAGCMLELAGG*MQMVKH
Trigger: ATGTTTTACCATCTGCATCCAGCCTCCTGCTAACTC...TAGCATGCACCCAGCAGGGGACTGAACTGGGAAACTCAAGGTTCTTTTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGAATCTCAATCCTGAGAGAGGCTTCCAAAACTGTCGACTCCTGGCTTTCTGGATCAACAGAAGAAAGCTaGCACTGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: RISILREASKTVDSWLSGSTEES*HCSGCL
Trigger: AAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGA...TCCAGAAAGCCAGGAGTCGACAGTTTTGGAAGCCTCTCTCAGGATTGAGATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACAGTAAAAAGAACCTTGAGTTTCCCAGTTCAGTCCCCTGCTGGGTGCATGCTATTACAGTATTGCCTTTaGGTCCAGGCACTCAACCTT +
Preference number: 4 (lower is better)
Translates to: TVKRTLSFPVQSPAGCMLLQYCL*VQALNL
Trigger: AAGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAA...TAGCATGCACCCAGCAGGGGACTGAACTGGGAAACTCAAGGTTCTTTTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGAAGGGGACAATCCAATaGGCTTATCACCACCCAATA +
Preference number: 4 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMKGTIQ*AYHHPI
Trigger: TATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGCTTCTGAAAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTGACACACATAAGACATaGGGGCTAACTGCAAGGACA +
Preference number: 4 (lower is better)
Translates to: ELLKASNICECAKSRYKGDTHKT*GLTART
Trigger: TGTCCTTGCAGTTAGCCCCCATGTCTTATGTGTGTC...ACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTTTCAGAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCACTCTTCCTGCTCTTaGACATCAGACTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GSLKFMKAFHVREDAHILHSSCS*TSDSRF
Trigger: GAACCTGGAGTCTGATGTCCAAGAGCAGGAAGAGTG...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATACCACCATTGTGTTGGTCTaGACTTGGGGGTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: NCNHKGCPHCIHTIYTHTTIVLV*TWGCRH
Trigger: ATGCCTGCACCCCCAAGTCCAGACCAACACAATGGT...GGTATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACAGTAAAAAGAACCTTGAGTTTCCCAGTTCAGTCCCCTGCTGGGTGCATGCTACCCATTAAGCCCTGGTaGATGAATGAGGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: TVKRTLSFPVQSPAGCMLPIKPW*MNEENA
Trigger: TGCATTTTCCTCATTCATCCACCAGGGCTTAATGGG...TAGCATGCACCCAGCAGGGGACTGAACTGGGAAACTCAAGGTTCTTTTTACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATCTAGTAGGTGGTCATTaGAGTGTGGCTACAGTTATT +
Preference number: 4 (lower is better)
Translates to: LACLHGNTGSLKFMKAFHLVGGH*SVATVI
Trigger: AATAACTGTAGCCACACTCCAATGACCACCTACTAG...ATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTGTAGTGGTTGTGTCTTaGAATACAAGAGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PHMEHLACLHGNTGSLKFVVVVS*NTRVVP
Trigger: AGGCACAACTCTTGTATTCCAAGACACAACCACTAC...AAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAAATTTGCCGTGCCCGGTaGCTCTGGGCAGCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEICRAR*LWAAFG
Trigger: TCCAAAGGCTGCCCAGAGCCACCGGGCACGGCAAAT...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTTTTGCCGGGTTCCCTTaGTCCTCAGACTGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KGGSMQSSSSHTYFTLRLFAGFP*SSDCSL
Trigger: AAGGGAGCAGTCTGAGGACCAAGGGAACCCGGCAAA...AAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTaGTCCCTGACTGACACCCACATATGGAACATTTGG +
Preference number: 4 (lower is better)
Translates to: CQKSSSSALRIL*SLTDTHIWNIW
Trigger: CCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 4 (lower is better)
Translates to: ESPAEELFSLIRMSHHFQGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...TTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR TCA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATGCCATGCCCCAGCTCTaGCCCACAGCACCATATACC +
Preference number: 4 (lower is better)
Translates to: QVAQANFILSQQDPFGKYAMPQL*PTAPYT
Trigger: GGTATATGGTGCTGTGGGTCAGAGCTGGGGCATGGC...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000415002.7
ENST00000437761.6
CDS-3UTR TCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACCAAAAAGTGGGTACATaGCACAAGATAGCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYQKVGT*HKIAVS
Trigger: GCTTACTGCTATCTTGTGTCATGTACCCACTTTTTG...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTCAAAAAGTGGGTACATaGCACAAGATAGCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: CHCKAGLPKSKGGSMQSSQKVGT*HKIAVS
Trigger: GCTTACTGCTATCTTGTGTCATGTACCCACTTTTTG...ACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTTTAAGGCCATTTATATaGCCCTTGTTGATTTGGACA +
Preference number: 4 (lower is better)
Translates to: ANRTGLQSLPEPLYLSQVLRPFI*PLLIWT
Trigger: TGTCCAAATCAACAAGGGTCATATAAATGGCCTTAA...AACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTAATATACCCATACCTTaGAGCCCCCAGTACATTCAA +
Preference number: 4 (lower is better)
Translates to: CHCKAGLPKSKGGSMQSSNIPIP*SPQYIQ
Trigger: TTGAATGTACTGGGGGCTTCAAGGTATGGGTATATT...ACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGCGAGCTAGTAGACTTTaGACACTGCTAAAGAACTTA +
Preference number: 4 (lower is better)
Translates to: MPPWQHGIPEVYESVPCERASRL*TLLKNL
Trigger: TAAGTTCTTTAGCAGTGTTCAAAGTCTACTAGCTCG...CTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGGTAGACATAGAAAGTaGAAGTTCAGAAAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: REPTQAVTAKLVFPRAKEGRHRK*KFRKGL
Trigger: TAAACCCTTTCTGAACTTTCACTTTCTATGTCTACC...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCGGGGTAAATGCATTGTaGTTCACTGTAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: CQKSSSSALRILLSLTDTGVNAL*FTVGFR
Trigger: TCTAAAACCTACAGTGAATCACAATGCATTTACCCC...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTGGGGTAAATGCATTGTaGTTCACTGTAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: PHMEHLACLHGNTGSLKFGVNAL*FTVGFR
Trigger: TCTAAAACCTACAGTGAATCACAATGCATTTACCCC...AAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAAAACAGAAGCTTACACTaGGAATTTATTGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQNRSLH*EFIGGL
Trigger: AAGCCCTCCAATAAATTCTCAGTGTAAGCTTCTGTT...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTGATGAAAGAACAGTCTTaGATTCAACTTCAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QTGLVFKVSQSPSILARLMKEQS*IQLQQN
Trigger: GTTCTGCTGAAGTTGAATTCAAGACTGTTCTTTCAT...CAACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LRILLSLTDTHIWNIWHAYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...GGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: SALRILLSLTDTHIWNIWMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...CCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCACACCATTGATGTATaGTATTACACTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSHTIDV*YYTFPV
Trigger: CACTGGAAAAGTGTAATAGCATACATCAATGGTGTG...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGCACACCATTGATGTATaGTATTACACTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ACLHGNTGSLKFMKAFHVHTIDV*YYTFPV
Trigger: CACTGGAAAAGTGTAATAGCATACATCAATGGTGTG...CACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGGTAAAACATACCCCTaGAGATCTGTTGTTATTAAG +
Preference number: 4 (lower is better)
Translates to: CREPTQAVTAKLVFPRAKGKTYP*RSVVIK
Trigger: CTTAATAACAACAGATCTGCAGGGGTATGTTTTACC...CTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTAGAACGAACAAATGACTaGTGGTTGTCTCAAAAACCA +
Preference number: 4 (lower is better)
Translates to: VPCERGCSYTPAPPSKDVERTND*WLSQKP
Trigger: TGGTTTTTGAGACAACCAGCAGTCATTTGTTCGTTC...TACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR GCA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCAGTGAGAGGATTGCCTaGGGCCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: AQANFILSQQDPFGKYQASERIA*GQPGQH
Trigger: ATGTTGCCCAGGCTGGCCGCAGGCAATCCTCTCACT...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533403.6
ENST00000652086.1
CDS-3UTR GCA 90 bp ACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTAAGTGAGAGGATTGCCTaGGGCCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: TVFSDKDVPPFSSCSLKLSERIA*GQPGQH
Trigger: ATGTTGCCCAGGCTGGCCGCAGGCAATCCTCTCACT...TAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR GCA 90 bp CCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTGTCCTGTTCACCTCATaGTATTGGGTAACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: PKSKGGSMQSSSSHTYFTVLFTS*YWVTFQ
Trigger: CTGGAAAGTTACCCAATAGCATGAGGTGAACAGGAC...AGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTGTCCTGTTCACCTCATaGTATTGGGTAACTTTCCAG +
Preference number: 4 (lower is better)
Translates to: VFPRAKEEACNLVQVTPTVLFTS*YWVTFQ
Trigger: CTGGAAAGTTACCCAATAGCATGAGGTGAACAGGAC...AGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTCTCTCTAACCCAGCTTaGAGACGGCCTATTGTGCGA +
Preference number: 4 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGLSNPA*RRPIVR
Trigger: TCGCACAATAGGCCGTCTGCAAGCTGGGTTAGAGAG...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GCGATCCAGCTAACTTTGCATAGTTTCCTCTTGTGTAAAGTGAGGTGCAAGTACTTCTTCCACTCTTCCTaGTCTTGGACATCAGACTCC +
Preference number: 4 (lower is better)
Translates to: AIQLTLHSFLLCKVRCKYFFHSS*SWTSDS
Trigger: GGAGTCTGATGTCCAAGAGCAGGAAGAGTGGAAGAA...GTACTTGCACCTCACTTTACACAAGAGGAAACTATGCAAAGTTAGCTGGATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCAACTAGGTTTAGAAGGTaGAGAGACCAGGGCAACTTC +
Preference number: 4 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSTRFRR*RDQGNF
Trigger: GAAGTTGCCCTGGTCTCTGCACCTTCTAAACCTAGT...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAACCCCCACTCCAGCTCTaGATCTGGACACACTGTCAG +
Preference number: 4 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEPPLQL*IWTHCQ
Trigger: CTGACAGTGTGTCCAGATGCAGAGCTGGAGTGGGGG...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCACCTCTCCACTCAAATaGCCCATTAAGTACCATCCT +
Preference number: 4 (lower is better)
Translates to: SQSPSILARLLKLILFFPTSPLK*PIKYHP
Trigger: AGGATGGTACTTAATGGGGCATTTGAGTGGAGAGGT...GGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: HGIPEVYESVPCERGCSYFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: LENIKPLECGSKRKRTTQQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCACTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYALSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAGAGTTAGCAGGAGGCTaGATGCAGATGGTAAAACAT +
Preference number: 4 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGELAGG*MQMVKH
Trigger: ATGTTTTACCATCTGCATCCAGCCTCCTGCTAACTC...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACACCTGAGAAGCTGCTTCTACGACCTGCTGAGGACATAATGATAAACACACACGAGTTAGCAGGAGGCTaGATGCAGATGGTAAAACAT +
Preference number: 4 (lower is better)
Translates to: TPEKLLLRPAEDIMINTHELAGG*MQMVKH
Trigger: ATGTTTTACCATCTGCATCCAGCCTCCTGCTAACTC...GTGTGTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAACGAACAAATGACTGCTaGTTGTCTCAAAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQRTNDC*LSQKPR
Trigger: CCTTGGTTTTTGAGACAACCAGCAGTCATTTGTTCG...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR CCA 90 bp TGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGACTCAACCTTGTCTATaGCATGAGTCACAGCAACTT +
Preference number: 4 (lower is better)
Translates to: CERGCSYTPAPPSKDVLMTQPCL*HESQQL
Trigger: AAGTTGCTGTGACTCATGCCATAGACAAGGTTGAGT...CATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTTTACAGTATTGCCTTTaGGTCCAGGCACTCAACCTT +
Preference number: 4 (lower is better)
Translates to: PKSKGGSMQSSSSHTYFTLQYCL*VQALNL
Trigger: AAGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAA...AGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CATACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGGTAAATCCAGATGAGTaGAGGGCACAGGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: HTPADLLLLRMTFGSLKLVNPDE*RAQGIG
Trigger: GCCAATACCCTGTGCCCTCCACTCATCTGGATTTAC...CAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCATAGGATCAGCCTACTaGGGTTGGCCACGTTGTATG +
Preference number: 4 (lower is better)
Translates to: EEACNLVQVTPTSLLDFFIGSAY*GWPRCM
Trigger: CATACAACGTGGCCAACCCCAGTAGGCTGATCCTAT...GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTACCATTGTGTTGGTCTaGACTTGGGGGTGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGTIVLV*TWGCRH
Trigger: ATGCCTGCACCCCCAAGTCCAGACCAACACAATGGT...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCAGGACCAAGCTATTCTaGGAAGCCCAGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: GSLKFMKAFHVREDAHILRTKLF*EAQNSL
Trigger: AAGACTGTTCTGGGCTTCCCAGAATAGCTTGGTCCT...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACAGTAAAAAGAACCTTGAGTTTCCCAGTTCAGTCCCCTGCTGGGTGCATGCTATTCCCCATTAAGCCCTaGTGGATGAATGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TVKRTLSFPVQSPAGCMLFPIKP*WMNEEN
Trigger: ATTTTCCTCATTCATCCACCAGGGCTTAATGGGGAA...TAGCATGCACCCAGCAGGGGACTGAACTGGGAAACTCAAGGTTCTTTTTACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: AQANFILSQQDPFGKYQALQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PRAKEEACNLVQVTPTSLNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...GAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: GGSMQSSSSHTYFTLRLLRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...AAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCCTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 4 (lower is better)
Translates to: SDKDVPPFSSCSLKLHRSLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...GGACCTGTGTAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR TCA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 4 (lower is better)
Translates to: PSILARLLKLILFFPNRILVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTGGATCTTGTTGTCCCTaGCTGACACCCACATATGGA +
Preference number: 4 (lower is better)
Translates to: KGGSMQSSSSHTYFTLRLGSCCP*LTPTYG
Trigger: TCCATATGTGGGTGTCAGTCAGGGACAACAAGATCC...AAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAATCAGGAACGAACAAATaGCTGCTGGTTGTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TPAPPSKDVLMMLTDYIQSGTNK*LLVVSK
Trigger: TTTTGAGACAACCAGCAGTCATTTGTTCGTTCCTGA...TTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR TCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAAAGCACTTTAGGAGGCTaGAGTGAGAGGATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SQVAQANFILSQQDPFGKSTLGG*SERIAC
Trigger: GCAGGCAATCCTCTCACTTCAGCCTCCTAAAGTGCT...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000533403.6
ENST00000652086.1
CDS-3UTR TCA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATAATATACCCATACCTTaGAGCCCCCAGTACATTCAA +
Preference number: 4 (lower is better)
Translates to: HGIPEVYESVPCERGCSYNIPIP*SPQYIQ
Trigger: TTGAATGTACTGGGGGCTTCAAGGTATGGGTATATT...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTCTGCCCTCATCACAATaGATGTCAGTCAGTACTAGC +
Preference number: 4 (lower is better)
Translates to: IPEVYESVPCERGCSYTPLPSSQ*MSVSTS
Trigger: GCTAGTACTGACTGACATTCATTGTGATGAGGGCAG...AGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAATCCTCTTGTGTAAAGTaGGGTGCAAGTACAGATGAA +
Preference number: 4 (lower is better)
Translates to: TPAPPSKDVLMMLTDYIQSSCVK*GASTDE
Trigger: TTCATCTGTACTTGCACCTCACTTTACACAAGAGGA...TTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAAGTAGACTTGCTGACCTaGGGAGCTGAGTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEVDLLT*GAEWEA
Trigger: TGCTTCCCACTCAGCTCCTCAGGTCAGCAAGTCTAC...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCAGGTAGACATAGAAAGTaGAAGTTCAGAAAGGGTTTA +
Preference number: 4 (lower is better)
Translates to: FGMPPWQHGIPEVYESVPGRHRK*KFRKGL
Trigger: TAAACCCTTTCTGAACTTTCACTTTCTATGTCTACC...TGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCAGTCAGCACCAGCACTaGTCATATATAGGATCAGCC +
Preference number: 4 (lower is better)
Translates to: PSILARLLKLILFFPNRISQHQH*SYIGSA
Trigger: GGCTGATCCTATATATGATCAGTGCTGGTGCTGACT...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GAGCTTCTGAAAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTTTTATTGGAGGGCTTTaGGACAGCTCATGTAATGGA +
Preference number: 4 (lower is better)
Translates to: ELLKASNICECAKSRYKGFIGGL*DSSCNG
Trigger: TCCATTACATGAGCTGTCTCAAAGCCCTCCAATAAA...ACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTTTCAGAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GCGATCCAGCTAACTTTGCATAGTTTCCTCTTGTGTAAAGTGAGGTGCAAGTACGCTTCTACGACCTGCTaGGGACATAATGATAAACAC +
Preference number: 4 (lower is better)
Translates to: AIQLTLHSFLLCKVRCKYASTTC*GHNDKH
Trigger: GTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGC...GTACTTGCACCTCACTTTACACAAGAGGAAACTATGCAAAGTTAGCTGGATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCTATAATGGGGACACTTaGTTGCTCTCTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: GSLKFMKAFHVREDAHILYNGDT*LLSLGT
Trigger: TGTCCCCAAAGAGAGCAAGCAAGTGTCCCCATTATA...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395850.9
CDS-3UTR GCA 90 bp CCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: PKSKGGSMQSSSSHTYFTAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...AGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: PSILARLLKLILFFPNRIMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CATGTAGTAGAGTGTTCACTCTGTAACTGTGTGTGGCAAAGCCAAGATATCCTAATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: HVVECSLCNCVWQSQDILMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...TAGGATATCTTGGCTTTGCCACACACAGTTACAGAGTGAACACTCTACTACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAACTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: TPAPPSKDVLMMLTDYIQLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...TTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: VFPRAKEEACNLVQVTPTLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...AGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTACACACCATTGATGTATaGTATTACACTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLHTIDV*YYTFPV
Trigger: CACTGGAAAAGTGTAATAGCATACATCAATGGTGTG...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAACACACATACCTGAACTaGCTTTCTACCAGTAACATT +
Preference number: 4 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQHTYLN*LSTSNI
Trigger: AATGTTACTGGTAGAAAGGCAGTTCAGGTATGTGTG...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGAAAGGGTGTCCCCACTaGATTCATACTATATACACA +
Preference number: 4 (lower is better)
Translates to: KNNLRAAENPLKLSLQSWKGCPH*IHTIYT
Trigger: TGTGTATATAGTATGAATGCAGTGGGGACACCCTTT...CCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTAGGTAAAACATACCCCTaGAGATCTGTTGTTATTAAG +
Preference number: 4 (lower is better)
Translates to: VPCERGCSYTPAPPSKDVGKTYP*RSVVIK
Trigger: CTTAATAACAACAGATCTGCAGGGGTATGTTTTACC...TACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAGAAATTCCTCCATCTaGAAAAGTCAGCCTATGCCA +
Preference number: 4 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGRNSSI*KSQPMP
Trigger: TGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCT...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTAAAAGCATCATTCATTaGACTCGGTTTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: TFGMPPWQHGIPEVYESVKSIIH*TRFVQQ
Trigger: CTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT...AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCGAAGAAAGCTGGCACTaGTCAGGATGTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GSLKFMKAFHVREDAHILEESWH*SGCLLS
Trigger: TGAAAGAAGACATCCTGAGCAGTGCCAGCTTTCTTC...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGGAAGAAAGCTGGCACTaGTCAGGATGTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SALRILLSLTDTHIWNIWEESWH*SGCLLS
Trigger: TGAAAGAAGACATCCTGAGCAGTGCCAGCTTTCTTC...CCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACAGTCACAGCAACTTTTTaGAGAAAGCAACCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTVTATF*RKQPQS
Trigger: ACTTTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGAC...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CATGTAGTAGAGTGTTCACTCTGTAACTGTGTGTGGCAAAGCCAAGATATCCTACTGGAGTACCTGGGGTaGTGTTTGCCTAGTACTATA +
Preference number: 4 (lower is better)
Translates to: HVVECSLCNCVWQSQDILLEYLG*CLPSTI
Trigger: TATAGTACTAGGCAAACAGCACCCCAGGTACTCCAG...TAGGATATCTTGGCTTTGCCACACACAGTTACAGAGTGAACACTCTACTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCACTGGAGTACCTGGGGTaGTGTTTGCCTAGTACTATA +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYALEYLG*CLPSTI
Trigger: TATAGTACTAGGCAAACAGCACCCCAGGTACTCCAG...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CATTTTCAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCTCATCAGGTGTTCCTTaGACCCCTAGCTCATCCCCC +
Preference number: 4 (lower is better)
Translates to: HFQKSIIHCTRFVQQSIISSGVP*TPSSSP
Trigger: GGGGGATGAGCTAGGGGTGCAAGGAACACCTGATGA...GATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTGAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAACTAGCTCCAGCCAGCTaGTCAGCCCATCAAGAATCC +
Preference number: 4 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQELAPAS*SAHQES
Trigger: GGATTCTTGATGGGCTGAGCAGCTGGCTGGAGCTAG...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACGTCAGTGGGGGTAAATaGATTGTGATTCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: SYTPAPPSKDVLMMLTDYVSGGK*IVIHCR
Trigger: CCTACAGTGAATCACAATGCATTTACCCCCACTGAC...GTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTTTCTTCCACTCTTCCTaGTCTTGGACATCAGACTCC +
Preference number: 4 (lower is better)
Translates to: IPEVYESVPCERGCSYTPFFHSS*SWTSDS
Trigger: GGAGTCTGATGTCCAAGAGCAGGAAGAGTGGAAGAA...AGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTTTCTTCCACTCTTCCTaGTCTTGGACATCAGACTCC +
Preference number: 4 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLFFHSS*SWTSDS
Trigger: GGAGTCTGATGTCCAAGAGCAGGAAGAGTGGAAGAA...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAACAGGAGGTTGTTTGTaGCACAATTTAAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGTGGCL*HNLRTK
Trigger: CTTGGTCCTTAAATTGTGGCACAAACAACCTCCTGT...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAACAGGAGGTTGTTTGTaGCACAATTTAAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: PPSKDVLMMLTDYIQGARTGGCL*HNLRTK
Trigger: CTTGGTCCTTAAATTGTGGCACAAACAACCTCCTGT...TCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGACCTCTCCACTCAAATaGCCCATTAAGTACCATCCT +
Preference number: 4 (lower is better)
Translates to: SALRILLSLTDTHIWNIWTSPLK*PIKYHP
Trigger: AGGATGGTACTTAATGGGGCATTTGAGTGGAGAGGT...CCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCTTCTTGCAGCACCAACTCCAATTCCATaGAGAGCTTGGAACACAACA +
Preference number: 4 (lower is better)
Translates to: CPTIFKLFVKVTQVLLAAPTPIP*RAWNTT
Trigger: TGTTGTGTTCCAAGCTCTGCATGGAATTGGAGTTGG...TGCTGCAAGAAGGACCTGTGTAACTTTAACGAACAGCTTGAAAATGGTGGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652086.1
CDS-3UTR CCA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCACTGGTGCTAAAGACTaGCGGCGCCCAAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: AQANFILSQQDPFGKYQATGAKD*RRPRSS
Trigger: AGAGGATCTTGGGCGCCGCCAGTCTTTAGCACCAGT...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000351554.8
CDS-3UTR CCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTC +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYARTDPP*IPIVIV
Trigger: GACAATCACAATGGGAATCCAAGGAGGGTCTGTCCT...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGGAAGTCTCAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTC +
Preference number: 4 (lower is better)
Translates to: WKSQTVTTKGVPTAFILYRTDPP*IPIVIV
Trigger: GACAATCACAATGGGAATCCAAGGAGGGTCTGTCCT...ATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTGAGACTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SYTPAPPSKDVLMMLTDYFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...GTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCGATCCAGCTAACTTTGCATAGTTTCCTCTTGTGTAAAGTGAGGTGCAAGTACTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: AIQLTLHSFLLCKVRCKYFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...GTACTTGCACCTCACTTTACACAAGAGGAAACTATGCAAAGTTAGCTGGATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATACCCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: NCNHKGCPHCIHTIYTHTQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...GGTATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCAAGCCTTTAGAATGTaGCAGCAAGAGAAAGCGGAC +
Preference number: 4 (lower is better)
Translates to: EEACNLVQVTPTSLLDFFQAFRM*QQEKAD
Trigger: GTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTG...GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTATTGTCCACAGAACCTaGAAGCTCTGGCTCCTCACT +
Preference number: 4 (lower is better)
Translates to: KGGSMQSSSSHTYFTLRLIVHRT*KLWLLT
Trigger: AGTGAGGAGCCAGAGCTTCCAGGTTCTGTGGACAAT...AAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395850.9
ENST00000652678.1
CDS-3UTR CCA 90 bp AAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KGGSMQSSSSHTYFTLRLLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...AAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATTTGGCATGCCTCCATaGCAACACGGGATCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SQVAQANFILSQQDPFGKFGMPP*QHGIPE
Trigger: TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSILARLLKLILFFPNRITDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTATCATGCCCTGCTATCTaGAACACTTCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: RRTVFSDKDVPPFSSCSLSCPAI*NTSPLP
Trigger: GGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGA...TAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CCA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGACTCTGTAACTGTGTGTaGCAAAGCCAAGATATCCTA +
Preference number: 4 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGLCNCV*QSQDIL
Trigger: TAGGATATCTTGGCTTTGCCACACACAGTTACAGAG...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACTCAACAGAAGAAAGCTaGCACTGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: SYTPAPPSKDVLMMLTDYSTEES*HCSGCL
Trigger: AAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGA...GTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAATACGACTCCTGGCTTTCTaGAGTGTGGCTGAATTCCCC +
Preference number: 4 (lower is better)
Translates to: KDVLMMLTDYIQGARGKIRLLAF*SVAEFP
Trigger: GGGGAATTCAGCCACACTCCAGAAAGCCAGGAGTCG...TATTTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTCTTCCCAGTGTAGTCTaGCCAAAAAGTGGGTACATG +
Preference number: 4 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLLPSVV*PKSGYM
Trigger: CATGTACCCACTTTTTGGCCAGACTACACTGGGAAG...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ACACCTGAGAAGCTGCTTCTACGACCTGCTGAGGACATAATGATAAACACACACACTCAACCTTGTCTATaGCATGAGTCACAGCAACTT +
Preference number: 4 (lower is better)
Translates to: TPEKLLLRPAEDIMINTHTQPCL*HESQQL
Trigger: AAGTTGCTGTGACTCATGCCATAGACAAGGTTGAGT...GTGTGTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGGAAATTAAGGTACTGTaGTCATTTATCTTATCCCAG +
Preference number: 4 (lower is better)
Translates to: ACLHGNTGSLKFMKAFHVEIKVL*SFILSQ
Trigger: CTGGGATAAGATAAATGACCACAGTACCTTAATTTC...CACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACGTGGTCATTGGAGTGTaGCTACAGTTATTATACAGT +
Preference number: 4 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYVVIGV*LQLLYS
Trigger: ACTGTATAATAACTGTAGCCACACTCCAATGACCAC...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp TTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTCTTTCCCAACAGGATC +
Preference number: 4 (lower is better)
Translates to: FKVSQSPSILAR*LKLILFFPNRI
Trigger: GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCTGCAGGCTATGACCTaGATGGCAGAAGACAGCCAG +
Preference number: 4 (lower is better)
Translates to: QVAQANFILSQQDPFGKYLQAMT*MAEDSQ
Trigger: CTGGCTGTCTTCTGCCATTCAGGTCATAGCCTGCAG...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LENIKPLECGSKRKRTTQNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PSILARLLKLILFFPNRITNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAACTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGC +
Preference number: 4 (lower is better)
Translates to: SQVAQANFILSQQDPFGKLGFPL*LSTEPG
Trigger: GCCAGGTTCTGTGGACAATCACAATGGGAATCCAAG...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS-3UTR TCA 90 bp TCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATCTTGGATTCCCATTGTaGTTGTCCACAGAACAGGGG +
Preference number: 4 (lower is better)
Translates to: SILARLLKLILFFPNRIHLGFPL*LSTEQG
Trigger: CCCCTGTTCTGTGGACAATCACAATGGGAATCCAAG...ATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437761.6
CDS-3UTR TCA 90 bp TGGAAGTCTCAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATCTAGAATCTCAATCCTaGGAGAGGCTTCCAAAACTG +
Preference number: 4 (lower is better)
Translates to: WKSQTVTTKGVPTAFILYLESQS*ERLPKL
Trigger: CAGTTTTGGAAGCCTCTCTCAGGATTGAGATTCTAG...ATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTGAGACTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGCAGCAACAGAAACTATTATATGACCCTTGTTaGTTTGGACAGCTTAACAGC +
Preference number: 4 (lower is better)
Translates to: PQGDLLALVQICWQQQKLLYDPC*FGQLNS
Trigger: GCTGTTAAGCTGTCCAAATCAACAAGGGTCATATAA...TAGTTTCTGTTGCTGCCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ACAGTAAAAAGAACCTTGAGTTTCCCAGTTCAGTCCCCTGCTGGGTGCATGCTATTAAGGCCATTTATATaGCCCTTGTTGATTTGGACA +
Preference number: 4 (lower is better)
Translates to: TVKRTLSFPVQSPAGCMLLRPFI*PLLIWT
Trigger: TGTCCAAATCAACAAGGGTCATATAAATGGCCTTAA...TAGCATGCACCCAGCAGGGGACTGAACTGGGAAACTCAAGGTTCTTTTTACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCACCTTGTCTATGGCATaGGTCACAGCAACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFTLSMA*VTATFC
Trigger: GCAAAAAGTTGCTGTGACTCATGCCATAGACAAGGT...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ACACCTGAGAAGCTGCTTCTACGACCTGCTGAGGACATAATGATAAACACACACCGAGCTAGTAGACTTTaGACACTGCTAAAGAACTTA +
Preference number: 4 (lower is better)
Translates to: TPEKLLLRPAEDIMINTHRASRL*TLLKNL
Trigger: TAAGTTCTTTAGCAGTGTTCAAAGTCTACTAGCTCG...GTGTGTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCTCCTCTTGTGTAAAGTaGGGTGCAAGTACAGATGAA +
Preference number: 4 (lower is better)
Translates to: GSLKFMKAFHVREDAHILSSCVK*GASTDE
Trigger: TTCATCTGTACTTGCACCTCACTTTACACAAGAGGA...GAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTGCTTCTACGACCTGCTaGGGACATAATGATAAACAC +
Preference number: 4 (lower is better)
Translates to: GGSMQSSSSHTYFTLRLLASTTC*GHNDKH
Trigger: GTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGC...AAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCGCTTCTACGACCTGCTaGGGACATAATGATAAACAC +
Preference number: 4 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFASTTC*GHNDKH
Trigger: GTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGC...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGAGGCAAAGTCCCTATaGGGTAATAATAAACCCACG +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAEAKSL*GNNKPT
Trigger: CGTGGGTTTATTATTACCTCATAGGGACTTTGCCTC...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCATACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGCATATTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: WHCSGCLLSVATIKHTAYYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...ATATGCAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GGSMQSSSSHTYFTLRLLYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...AAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCTTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GSMQSSSSHTYFTLRLLPYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...AGGAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGCACTCAAGCTGTCACTaGAAAGCTGGTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: ILARLLKLILFFPNRIHLHSSCH*KAGLPK
Trigger: CTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTG...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTAAAGGGTGTCCCCACTaGATTCATACTATATACACA +
Preference number: 4 (lower is better)
Translates to: CKAGLPKSKGGSMQSSSSKGCPH*IHTIYT
Trigger: TGTGTATATAGTATGAATGCAGTGGGGACACCCTTT...ACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACAGAAATTCCTCCATCTaGAAAAGTCAGCCTATGCCA +
Preference number: 4 (lower is better)
Translates to: SYTPAPPSKDVLMMLTDYRNSSI*KSQPMP
Trigger: TGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCT...GTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTAAAAGCATCATTCATTaGACTCGGTTTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: CKAGLPKSKGGSMQSSSSKSIIH*TRFVQQ
Trigger: CTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT...ACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAAGCTGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGTTTACATTACAGTATTaGCTTTGGGTCCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: KAGTAQDVFFQLLPLSILFTLQY*LWVQAL
Trigger: GAGTGCCTGGACCCAAAGGCAATACTGTAATGTAAA...CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CATACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGGTCAGTGGGGGTAAATaGATTGTGATTCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: HTPADLLLLRMTFGSLKLVSGGK*IVIHCR
Trigger: CCTACAGTGAATCACAATGCATTTACCCCCACTGAC...CAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CATTTTCAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCCTCTCTAACCCAGCTTaGAGACGGCCTATTGTGCGA +
Preference number: 4 (lower is better)
Translates to: HFQKSIIHCTRFVQQSIILSNPA*RRPIVR
Trigger: TCGCACAATAGGCCGTCTGCAAGCTGGGTTAGAGAG...GATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCTTTTGCAGTCAGCAGTTaGGTTAGGACAGTTGTAGCA +
Preference number: 4 (lower is better)
Translates to: GSMQSSSSHTYFTLRLLPFAVSS*VRTVVA
Trigger: TGCTACAACTGTCCTAACCCAACTGCTGACTGCAAA...AGGAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAACCCTGCAAACAGGACTaGTCTTCAAAGTCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SQVAQANFILSQQDPFGKPCKQD*SSKSPR
Trigger: TCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGG...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATCTGTCACTGCAAAGCTaGTCTTCCCAAGAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SILARLLKLILFFPNRIHLSLQS*SSQEQR
Trigger: CCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAG...ATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAACTGACACCCACATATaGAACATTTGGCATGCCTCC +
Preference number: 4 (lower is better)
Translates to: YPCRSVVIKDDLWKSQTVTDTHI*NIWHAS
Trigger: GGAGGCATGCCAAATGTTCCATATGTGGGTGTCAGT...TACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTGAGTTAGCAGGAGGCTaGATGCAGATGGTAAAACAT +
Preference number: 4 (lower is better)
Translates to: GGSMQSSSSHTYFTLRLLELAGG*MQMVKH
Trigger: ATGTTTTACCATCTGCATCCAGCCTCCTGCTAACTC...AAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCTCAACAGAAGAAAGCTaGCACTGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: EEACNLVQVTPTSLLDFFSTEES*HCSGCL
Trigger: AAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGA...GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAGAAATTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATAAAACTGTCGACTCCTaGCTTTCTGGAGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KKFLHLQKSAYAIKYSQDKTVDS*LSGVWL
Trigger: CAGCCACACTCCAGAAAGCCAGGAGTCGACAGTTTT...ATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATGAAATTAAGGTACTGTaGTCATTTATCTTATCCCAG +
Preference number: 4 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNEIKVL*SFILSQ
Trigger: CTGGGATAAGATAAATGACCACAGTACCTTAATTTC...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp CCAAAGTTTAAGGCCATTTATATGACCCTTGTTGATTaGGACAGCTTAACAGCCCCATCTCCCCATTTAGTG +
Preference number: 4 (lower is better)
Translates to: PKFKAIYMTLVD*DSLTAPSPHLV
Trigger: CACTAAATGGGGAGATGGGGCTGTTAAGCTGTCCAAATCAACAAGGGTCATATAAATGGCCTTAAACTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp TTATTCATCTCAATTAACCATTGTGTTGGTCTGGACTaGGGGGTGCAGGCATTCCCATCTCCCTTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: LFISINHCVGLD*GVQAFPSPFQK
Trigger: TTTTTGAAAGGGAGATGGGAATGCCTGCACCCCCAAGTCCAGACCAACACAATGGTTAATTGAGATGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp GTTAGCTCATTTTCCCTCAAGCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAACTTCCAACACTTGTTA +
Preference number: 4 (lower is better)
Translates to: VSSFSLKRVVTS*KLQCSNFQHLL
Trigger: TAACAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGACGTCACAACCCGCTTGAGGGAAAATGAGCTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651485.1
ENST00000652086.1
CDS-3UTR TCA 90 bp ATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCTTCTTGCAGCAGTAGTACGTCTTGGATTCCCATTGTaGTTGTCCACAGAACTACTG +
Preference number: 4 (lower is better)
Translates to: IFKLFVKVTQVLLAAVVRLGFPL*LSTELL
Trigger: CAGTAGTTCTGTGGACAATCACAATGGGAATCCAAG...ACGTACTACTGCTGCAAGAAGGACCTGTGTAACTTTAACGAACAGCTTGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643183.1
CDS-3UTR TCA 90 bp AATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: NGVTSRRTVFSDKDVPPFNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...AAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR TCA 90 bp CCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PAEELFSLIRMSHHFQAVNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...AACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR TCA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTAATCAGATGAACAATTaGCGGCTGTTTTGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: GGSMQSSSSHTYFTLRLLNQMNN*RLFCSQ
Trigger: CTGACTGCAAAACAGCCGTCAATTGTTCATCTGATT...AAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: ILARLLKLILFFPNRIHLRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: KGGSMQSSSSHTYFTLRLTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...AAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAACTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 4 (lower is better)
Translates to: SQVAQANFILSQQDPFGKLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATATACACACATACCTaGACTGCCTTTCTACCAGTA +
Preference number: 4 (lower is better)
Translates to: SYTPAPPSKDVLMMLTDYIYTHT*TAFLPV
Trigger: TACTGGTAGAAAGGCAGTTCAGGTATGTGTGTATAT...GTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CTGGATGCAGATGGTAAAACATACCCCTGCAGATCTGTTGTTATTAAGGATGACTGTAAGGAAAGACACTaGGCTAACAGAGAACACAGA +
Preference number: 4 (lower is better)
Translates to: LDADGKTYPCRSVVIKDDCKERH*ANREHR
Trigger: TCTGTGTTCTCTGTTAGCTCAGTGTCTTTCCTTACA...GTCATCCTTAATAACAACAGATCTGCAGGGGTATGTTTTACCATCTGCATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGAGAACTCACATGAAATaGGCTTCTTTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ILARLLKLILFFPNRIHLRTHMK*ASLLSR
Trigger: CCGGCTGAGCAAAGAAGCTCATTTCATGTGAGTTCT...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTTGTCCTTACCTACAATaGACCATCACAGGCACCCAC +
Preference number: 4 (lower is better)
Translates to: YLSQVAQANFILSQQDPFCPYLQ*TITGTH
Trigger: GTGGGTGCCTGTGATGGTTCATTGTAGGTAAGGACA...AAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTTTTATTGGAGGGCTTTaGGACAGCTCATGTAATGGA +
Preference number: 4 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLFIGGL*DSSCNG
Trigger: TCCATTACATGAGCTGTCTCAAAGCCCTCCAATAAA...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ACCATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCTTCTTGCAGCAGTAGTATACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: TIFKLFVKVTQVLLAAVVYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...TACTACTGCTGCAAGAAGGACCTGTGTAACTTTAACGAACAGCTTGAAAATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR GCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTGGATGCAGATGGTAAAACATACCCCTGCAGATCTGTTGTTATTAAGGATGACCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: LDADGKTYPCRSVVIKDDLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...GTCATCCTTAATAACAACAGATCTGCAGGGGTATGTTTTACCATCTGCATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACACACCATTGATGTATaGTATTACACTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTHTIDV*YYTFPV
Trigger: CACTGGAAAAGTGTAATAGCATACATCAATGGTGTG...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACAAAGGGTGTCCCCACTaGATTCATACTATATACACA +
Preference number: 4 (lower is better)
Translates to: SYTPAPPSKDVLMMLTDYKGCPH*IHTIYT
Trigger: TGTGTATATAGTATGAATGCAGTGGGGACACCCTTT...GTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCAGAAGAAAGCTGGCACTaGTCAGGATGTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LYLSQVAQANFILSQQDPEESWH*SGCLLS
Trigger: TGAAAGAAGACATCCTGAGCAGTGCCAGCTTTCTTC...TGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTGAAGAAAGCTGGCACTaGTCAGGATGTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGEESWH*SGCLLS
Trigger: TGAAAGAAGACATCCTGAGCAGTGCCAGCTTTCTTC...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CATGTAGTAGAGTGTTCACTCTGTAACTGTGTGTGGCAAAGCCAAGATATCCTATTTACATTACAGTATTaGCTTTGGGTCCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: HVVECSLCNCVWQSQDILFTLQY*LWVQAL
Trigger: GAGTGCCTGGACCCAAAGGCAATACTGTAATGTAAA...TAGGATATCTTGGCTTTGCCACACACAGTTACAGAGTGAACACTCTACTACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATACCACAGGAGGTTGTTTGTaGCACAATTTAAGGACCAAG +
Preference number: 4 (lower is better)
Translates to: NCNHKGCPHCIHTIYTHTTGGCL*HNLRTK
Trigger: CTTGGTCCTTAAATTGTGGCACAAACAACCTCCTGT...GGTATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATTCACACCTGAGAAGCTaGTTCTACGACCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QVAQANFILSQQDPFGKYSHLRS*FYDLLR
Trigger: CCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGTGA...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATAACCTCTCCACTCAAATaGCCCATTAAGTACCATCCT +
Preference number: 4 (lower is better)
Translates to: QTVTTKGVPTAFILYTHITSPLK*PIKYHP
Trigger: AGGATGGTACTTAATGGGGCATTTGAGTGGAGAGGT...TATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATTCATGCCCTGCTATCTaGAACACTTCCCCACTTCCC +
Preference number: 4 (lower is better)
Translates to: QVAQANFILSQQDPFGKYSCPAI*NTSPLP
Trigger: GGGAAGTGGGGAAGTGTTCCAGATAGCAGGGCATGA...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCCCTCCTCTGAGGGGATaGGTATCAGCTTTGGTAATG +
Preference number: 4 (lower is better)
Translates to: AQANFILSQQDPFGKYQAPPLRG*VSALVM
Trigger: CATTACCAAAGCTGATACCCATCCCCTCAGAGGAGG...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR CCA 90 bp CATTTTCAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCGCCAGTAGGCATGACTaGTGTTCGATTCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: HFQKSIIHCTRFVQQSIIASRHD*CSIPNS
Trigger: GGAGTTAGGAATCGAACACCAGTCATGCCTACTGGC...GATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAAGTAAATCCAGATGAGTaGAGGGCACAGGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEVNPDE*RAQGIG
Trigger: GCCAATACCCTGTGCCCTCCACTCATCTGGATTTAC...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCTTAGTTCAGATCTGTTaGCAGCAACAGAAACTAATG +
Preference number: 4 (lower is better)
Translates to: LRILLSLTDTHIWNIWHALVQIC*QQQKLM
Trigger: CATTAGTTTCTGTTGCTGCCAACAGATCTGAACTAA...GGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCCACTCTTCCTGCTCTTaGACATCAGACTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AQANFILSQQDPFGKYQAHSSCS*TSDSRF
Trigger: GAACCTGGAGTCTGATGTCCAAGAGCAGGAAGAGTG...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAACCACAAGGACCAAGCTATTCTaGGAAGCCCAGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: CRSVVIKDDLWKSQTVTTRTKLF*EAQNSL
Trigger: AAGACTGTTCTGGGCTTCCCAGAATAGCTTGGTCCT...TGTGGTTACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAACCCATTAAGCCCTGGTaGATGAATGAGGAAAATGCA +
Preference number: 4 (lower is better)
Translates to: SKDVLMMLTDYIQGARGKPIKPW*MNEENA
Trigger: TGCATTTTCCTCATTCATCCACCAGGGCTTAATGGG...TTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCGTAGTGGTTGTGTCTTaGAATACAAGAGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSILARLLKLILFFPNRIVVVVS*NTRVVP
Trigger: AGGCACAACTCTTGTATTCCAAGACACAACCACTAC...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp TGGATGCAGATGGTAAAACATACCCCTGCAGATCTGTaGTTATTAAGGATGACCTTTGGAAGTCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: WMQMVKHTPADL*LLRMTFGSLKL
Trigger: CAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATGTTTTACCATCTGCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp ACGTCGTTGAAATTGCAATGCTCAAACTTCCAACACTaGTTATACACTTGTAACCCTCCTACGTGTCCTTTG +
Preference number: 4 (lower is better)
Translates to: TSLKLQCSNFQH*LYTCNPPTCPL
Trigger: CAAAGGACACGTAGGAGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGACGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS-3UTR TCA 90 bp GTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTACACTCCACAGAACTACTGTaGAGTAGGTCTCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: VFSDKDVPPFSSCSLKLHSTELL*SRSQLL
Trigger: TAGGAGTTGAGACCTACTTCACAGTAGTTCTGTGGA...GTGTAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643183.1
CDS-3UTR TCA 90 bp AAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAATACTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGA +
Preference number: 4 (lower is better)
Translates to: KDVLMMLTDYIQGARGKILGFPL*LSTEPG
Trigger: TCCAGGTTCTGTGGACAATCACAATGGGAATCCAAG...TATTTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000652678.1
CDS-3UTR TCA 90 bp TATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: YLSQVAQANFILSQQDPFRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...AAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTAAGAGGAAAAATAATCTaGGGGCTGCAGAGAACCCAC +
Preference number: 4 (lower is better)
Translates to: TVFSDKDVPPFSSCSLKLRGKII*GLQRTH
Trigger: GTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCT...TAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR TCA 90 bp AGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RRTVFSDKDVPPFSSCSLTNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...TAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR TCA 90 bp TATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTCTTGTTGTCCCTGACTaGCACCCACATATGGAACAT +
Preference number: 4 (lower is better)
Translates to: YLSQVAQANFILSQQDPFLVVPD*HPHMEH
Trigger: ATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAG...AAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp ATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTATATACACACATACCTaGACTGCCTTTCTACCAGTA +
Preference number: 4 (lower is better)
Translates to: MESPAEELFSLIRMSHHFIYTHT*TAFLPV
Trigger: TACTGGTAGAAAGGCAGTTCAGGTATGTGTGTATAT...AAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS-3UTR TCA 90 bp TGGAAGTCTCAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATATATACACACATACCTaGACTGCCTTTCTACCAGTA +
Preference number: 4 (lower is better)
Translates to: WKSQTVTTKGVPTAFILYIYTHT*TAFLPV
Trigger: TACTGGTAGAAAGGCAGTTCAGGTATGTGTGTATAT...ATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTGAGACTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTTTTAGAACTCACATGAAATaGGCTTCTTTGCTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KSIIHCTRFVQQSIIKGFRTHMK*ASLLSR
Trigger: CCGGCTGAGCAAAGAAGCTCATTTCATGTGAGTTCT...AAAACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATACCTTGTCTATGGCATaGGTCACAGCAACTTTTTGC +
Preference number: 4 (lower is better)
Translates to: SILARLLKLILFFPNRIHTLSMA*VTATFC
Trigger: GCAAAAAGTTGCTGTGACTCATGCCATAGACAAGGT...ATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp AACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATACCTTTCAGGAAATACCATaGGCTCCACTTATCTACTCA +
Preference number: 4 (lower is better)
Translates to: NCNHKGCPHCIHTIYTHTFQEIP*APLIYS
Trigger: TGAGTAGATAAGTGGAGCTCATGGTATTTCCTGAAA...GGTATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TGGAAGTCTCAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATGGGGTAAATGCATTGTaGTTCACTGTAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: WKSQTVTTKGVPTAFILYGVNAL*FTVGFR
Trigger: TCTAAAACCTACAGTGAATCACAATGCATTTACCCC...ATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTGAGACTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTATTTATTGGAGGGCTTTaGGACAGCTCATGTAATGGA +
Preference number: 4 (lower is better)
Translates to: YPCRSVVIKDDLWKSQTVFIGGL*DSSCNG
Trigger: TCCATTACATGAGCTGTCTCAAAGCCCTCCAATAAA...TACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp TTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATCATAAAACTCAAGTGCCACAATaGACACCCATAAACTGCTGT +
Preference number: 4 (lower is better)
Translates to: FLHLQKSAYAIKYSQDHKTQVPQ*TPINCC
Trigger: ACAGCAGTTTATGGGTGTTCATTGTGGCACTTGAGT...TTTATGATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCTTCTTGCAGCAGTAGTACGTGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: IFKLFVKVTQVLLAAVVRAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...ACGTACTACTGCTGCAAGAAGGACCTGTGTAACTTTAACGAACAGCTTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR GCA 90 bp AAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTTTTATGCTCATATACTCCTaGCCCACCCTCCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: KSIIHCTRFVQQSIIKGFMLIYS*PTLQRC
Trigger: ACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCAT...AAAACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCTTCTTGCAGCAGTAGTACGTCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: IFKLFVKVTQVLLAAVVRLSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...ACGTACTACTGCTGCAAGAAGGACCTGTGTAACTTTAACGAACAGCTTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000651485.1
ENST00000652086.1
CDS-3UTR GCA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCAGGTAAAACATACCCCTaGAGATCTGTTGTTATTAAG +
Preference number: 4 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSGKTYP*RSVVIK
Trigger: CTTAATAACAACAGATCTGCAGGGGTATGTTTTACC...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTGTGGCACTCAGATTTTaGTTTAGAGGACTACCTTCT +
Preference number: 4 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGVALRF*FRGLPS
Trigger: AGAAGGTAGTCCTCTAAAGCAAAATCTGAGTGCCAC...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAGTGGCACTCAGATTTTaGTTTAGAGGACTACCTTCT +
Preference number: 4 (lower is better)
Translates to: SKDVLMMLTDYIQGARGKVALRF*FRGLPS
Trigger: AGAAGGTAGTCCTCTAAAGCAAAATCTGAGTGCCAC...TTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTATCCACGGGTTTAACTaGTGCTCTCCTGAAATGAAA +
Preference number: 4 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGIHGFN*CSPEMK
Trigger: TTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGAT...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGCACATATGGAACATTTaGCATGCCTCCATGGCAACA +
Preference number: 4 (lower is better)
Translates to: ILARLLKLILFFPNRIHLHIWNI*HASMAT
Trigger: TGTTGCCATGGAGGCATGCCAAATGTTCCATATGTG...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TGGAAGTCTCAAACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATGTGGTCATTGGAGTGTaGCTACAGTTATTATACAGT +
Preference number: 4 (lower is better)
Translates to: WKSQTVTTKGVPTAFILYVVIGV*LQLLYS
Trigger: ACTGTATAATAACTGTAGCCACACTCCAATGACCAC...ATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTTTGAGACTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CTGAATCTTGAGATTCATTCACTAGAATACACAGGGAAAAGGAAAAAGTTTGCCACTAATGATGCTAACTaGCTACATCCAAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LNLEIHSLEYTGKRKKFATNDAN*LHPRSQ
Trigger: CTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGT...GGCAAACTTTTTCCTTTTCCCTGTGTATTCTAGTGAATGAATCTCAAGATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTTCGTTGAAATTGCAATaGTCAAACTTCCAACACTTG +
Preference number: 4 (lower is better)
Translates to: GGSMQSSSSHTYFTLRLLSLKLQ*SNFQHL
Trigger: CAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGA...AAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGCAAAGGAGGAAGCATaGAATCTAGTTCAAGTCACA +
Preference number: 4 (lower is better)
Translates to: ILARLLKLILFFPNRIHLAKEEA*NLVQVT
Trigger: TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGC...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTAAAGGGTGTCCCCACTaGATTCATACTATATACACA +
Preference number: 4 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGKGCPH*IHTIYT
Trigger: TGTGTATATAGTATGAATGCAGTGGGGACACCCTTT...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGGTAAAACATACCCCTaGAGATCTGTTGTTATTAAG +
Preference number: 4 (lower is better)
Translates to: IPEVYESVPCERGCSYTPGKTYP*RSVVIK
Trigger: CTTAATAACAACAGATCTGCAGGGGTATGTTTTACC...AGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAACCACAAGAAATTCCTCCATCTaGAAAAGTCAGCCTATGCCA +
Preference number: 4 (lower is better)
Translates to: CRSVVIKDDLWKSQTVTTRNSSI*KSQPMP
Trigger: TGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCT...TGTGGTTACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAAAAAGCATCATTCATTaGACTCGGTTTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: YPCRSVVIKDDLWKSQTVKSIIH*TRFVQQ
Trigger: CTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT...TACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp TCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAAAAAGCATCATTCATTaGACTCGGTTTGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: SKDVLMMLTDYIQGARGKKSIIH*TRFVQQ
Trigger: CTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT...TTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGA
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAAGTCACAGCAACTTTTTaGAGAAAGCAACCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SQVAQANFILSQQDPFGKVTATF*RKQPQS
Trigger: ACTTTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGAC...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAACATATGTATAAGCAGTaGCAGGGACAACTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SQVAQANFILSQQDPFGKHMYKQ*QGQLVG
Trigger: ACCTACTAGTTGTCCCTGGCACTGCTTATACATATG...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTTCAACAGAAGAAAGCTaGCACTGCTCAGGATGTCTT +
Preference number: 4 (lower is better)
Translates to: YLSQVAQANFILSQQDPFSTEES*HCSGCL
Trigger: AAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGA...AAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCATTAGTTCAGATCTGTTaGCAGCAACAGAAACTAATG +
Preference number: 4 (lower is better)
Translates to: FGKYQAFRMWQQEKADYALVQIC*QQQKLM
Trigger: CATTAGTTTCTGTTGCTGCCAACAGATCTGAACTAA...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGTTCCCCATTAAGCCCTaGTGGATGAATGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ILARLLKLILFFPNRIHLFPIKP*WMNEEN
Trigger: ATTTTCCTCATTCATCCACCAGGGCTTAATGGGGAA...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp CATACCTTGAAGCCCCCAGTACATTCAAGACCAAGTTaGGCAAATAGATTAGCATCTTTCAGGAAATACCAT +
Preference number: 4 (lower is better)
Translates to: HTLKPPVHSRPS*ANRLASFRKYH
Trigger: ATGGTATTTCCTGAAAGATGCTAATCTATTTGCCAAACTTGGTCTTGAATGTACTGGGGGCTTCAAGGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATTACACAGGTCCTTCTTaGAGCAGTAGTACGTTAGCT +
Preference number: 4 (lower is better)
Translates to: QVAQANFILSQQDPFGKYYTGPS*SSSTLA
Trigger: AGCTAACGTACTACTGCTGCAAGAAGGACCTGTGTA...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR GCA 90 bp CATTTTCAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCCTCTCTAAGTTTTCATaGCCTGCTATCTGGAACACT +
Preference number: 4 (lower is better)
Translates to: HFQKSIIHCTRFVQQSIILSKFS*PAIWNT
Trigger: AGTGTTCCAGATAGCAGGGCATGAAAACTTAGAGAG...GATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTTTTATCCACGGGTTTAACTaGTGCTCTCCTGAAATGAAA +
Preference number: 4 (lower is better)
Translates to: KSIIHCTRFVQQSIIKGFIHGFN*CSPEMK
Trigger: TTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGAT...AAAACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp AAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAATAACTCAACCTTGTCTATaGCATGAGTCACAGCAACTT +
Preference number: 4 (lower is better)
Translates to: KDVLMMLTDYIQGARGKITQPCL*HESQQL
Trigger: AAGTTGCTGTGACTCATGCCATAGACAAGGTTGAGT...TATTTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp TCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAATTAGTTCAGATCTGTTaGCAGCAACAGAAACTAATG +
Preference number: 4 (lower is better)
Translates to: SKDVLMMLTDYIQGARGKLVQIC*QQQKLM
Trigger: CATTAGTTTCTGTTGCTGCCAACAGATCTGAACTAA...TTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CATACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGGAAATTAAGGTACTGTaGTCATTTATCTTATCCCAG +
Preference number: 4 (lower is better)
Translates to: HTPADLLLLRMTFGSLKLEIKVL*SFILSQ
Trigger: CTGGGATAAGATAAATGACCACAGTACCTTAATTTC...CAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CTGAATCTTGAGATTCATTCACTAGAATACACAGGGAAAAGGAAAAAGTTTGCCCTAGTAGGTGGTCATTaGAGTGTGGCTACAGTTATT +
Preference number: 4 (lower is better)
Translates to: LNLEIHSLEYTGKRKKFALVGGH*SVATVI
Trigger: AATAACTGTAGCCACACTCCAATGACCACCTACTAG...GGCAAACTTTTTCCTTTTCCCTGTGTATTCTAGTGAATGAATCTCAAGATTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CCA 90 bp CATTTTCAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCGTAGTGGTTGTGTCTTaGAATACAAGAGTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HFQKSIIHCTRFVQQSIIVVVVS*NTRVVP
Trigger: AGGCACAACTCTTGTATTCCAAGACACAACCACTAC...GATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCATATACACACATACCTaGACTGCCTTTCTACCAGTA +
Preference number: 4 (lower is better)
Translates to: AQANFILSQQDPFGKYQAIYTHT*TAFLPV
Trigger: TACTGGTAGAAAGGCAGTTCAGGTATGTGTGTATAT...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp AAGAAATTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATCACACCATTGATGTATaGTATTACACTTTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: KKFLHLQKSAYAIKYSQDHTIDV*YYTFPV
Trigger: CACTGGAAAAGTGTAATAGCATACATCAATGGTGTG...ATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGGTAAAACATACCCCTaGAGATCTGTTGTTATTAAG +
Preference number: 4 (lower is better)
Translates to: ILARLLKLILFFPNRIHLGKTYP*RSVVIK
Trigger: CTTAATAACAACAGATCTGCAGGGGTATGTTTTACC...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
3UTR CAA 72 bp CTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LKLILFFPNRIH*ENIKPLECGSK
Trigger: CTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATTTTCAGGAAATACCATaGGCTCCACTTATCTACTCA +
Preference number: 4 (lower is better)
Translates to: QVAQANFILSQQDPFGKYFQEIP*APLIYS
Trigger: TGAGTAGATAAGTGGAGCTCATGGTATTTCCTGAAA...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR TCA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCGAGCTAGTAGACTTTaGACACTGCTAAAGAACTTA +
Preference number: 4 (lower is better)
Translates to: QVAQANFILSQQDPFGKYRASRL*TLLKNL
Trigger: TAAGTTCTTTAGCAGTGTTCAAAGTCTACTAGCTCG...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR GCA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCTCGTTGAAATTGCAATaGTCAAACTTCCAACACTTG +
Preference number: 4 (lower is better)
Translates to: AQANFILSQQDPFGKYQASLKLQ*SNFQHL
Trigger: CAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGA...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
3UTR CAA 72 bp ATCCATGAAGTTATAGCCAGGGGGTTAAATAAGAAGTaGATGACAAACTTGGTTTCTCTAACAAGTATGCAA +
Preference number: 4 (lower is better)
Translates to: IHEVIARGLNKK*MTNLVSLTSMQ
Trigger: TTGCATACTTGTTAGAGAAACCAAGTTTGTCATCAACTTCTTATTTAACCCCCTGGCTATAACTTCATGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS GCA 90 bp AAGACTGGCGGCGCCCAAGATCCTCTTCCAGCCTCGAGCCGCTTCTaGGCTCAGCCCCCGCATTCTTTCGCTCCAGCCCGCAAGGCTCCG +
Preference number: 5 (lower is better)
Translates to: KTGGAQDPLPASSRF*AQPPHSFAPARKAP
Trigger: CGGAGCCTTGCGGGCTGGAGCGAAAGAATGCGGGGGCTGAGCGCAGAAGCGGCTCGAGGCTGGAAGAGGATCTTGGGCGCCGCCAGTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351554.8
CDS CCA 90 bp AAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACCTGGCGGCGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: KTARTSSSPNRTDPP*IPIVIVHRTWRRPR
Trigger: TCTTGGGCGCCGCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS-3UTR CAA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: QEKADYAGTGSLGEALLVAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: ESGLRRNGEFGRSSPGVDAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...GTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTTCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGGCACCAGTGGGTTGGTaGCCAGGGGCTCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LPSSGASLQTGLVFKVSQAPVGW*PGALGP
Trigger: AGGCCCAAGAGCCCCTGGCAACCAACCCACTGGTGC...CTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RAAENPLKLSLQSWSSQEAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...CTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GGACAGCCTCCAAATTGTCACCCTAGCCTTCAGGGCAAGGCTGCACACACGGCCATCAGCCTACTGGGGTaGGCCACGTTGTATGTAGCT +
Preference number: 5 (lower is better)
Translates to: GQPPNCHPSLQGKAAHTAISLLG*ATLYVA
Trigger: AGCTACATACAACGTGGCCAACCCCAGTAGGCTGAT...GGCCGTGTGTGCAGCCTTGCCCTGAAGGCTAGGGTGACAATTTGGAGGCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGCACCAGTGGGTTGGTaGCCAGGGGCTCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: REPTQAVTAKLVFPRAKEAPVGW*PGALGP
Trigger: AGGCCCAAGAGCCCCTGGCAACCAACCCACTGGTGC...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATGTGTTGGTCTGGACTaGGGGGTGCAGGCATTCCCA +
Preference number: 5 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLCVGLD*GVQAFP
Trigger: TGGGAATGCCTGCACCCCCAAGTCCAGACCAACACA...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS TCA 90 bp TCCCTGGGCCATGCCCCAGCTCTGACCCACAGCACCATATACCCTTaGGTAGGCTCAGTCCCTATAAGCCCCAGTGTGTACTACCACACT +
Preference number: 5 (lower is better)
Translates to: SLGHAPALTHSTIYP*VGSVPISPSVYYHT
Trigger: AGTGTGGTAGTACACACTGGGGCTTATAGGGACTGAGCCTACTCAAGGGTATATGGTGCTGTGGGTCAGAGCTGGGGCATGGCCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415002.7
ENST00000437761.6
CDS CCA 90 bp AAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACCTGGAAGCTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: KTARTSSSPNRTDPP*IPIVIVHRTWKLWL
Trigger: GAGCCAGAGCTTCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395850.9
ENST00000652678.1
CDS CCA 90 bp AAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACAGGGGGAGTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: KTARTSSSPNRTDPP*IPIVIVHRTGGVKA
Trigger: TGCCTTGACTCCCCCTGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437761.6
CDS-3UTR CAA 90 bp GCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTCTGGGGTTGGCCACGTaGTATGTAGCTGCGAATAGC +
Preference number: 5 (lower is better)
Translates to: ARESGLRRNGEFGRSSPGLGLAT*YVAANS
Trigger: GCTATTCGCAGCTACATACAACGTGGCCAACCCCAG...ACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCGCTTGGGTGGGGCTATaGAGAGTCAGCACCAGCACT +
Preference number: 5 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPAWVGL*RVSTST
Trigger: AGTGCTGGTGCTGACTCTCAATAGCCCCACCCAAGC...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGTTCAGGGAACGGCATCAACAGAAGAAAGCTGGCACTGCTCAGGATGTCTTCTGCACCAGTGGGTTGGTaGCCAGGGGCTCTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: CSGNGINRRKLALLRMSSAPVGW*PGALGP
Trigger: AGGCCCAAGAGCCCCTGGCAACCAACCCACTGGTGC...AGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATGCCGTTCCCTGAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS CCA 90 bp AAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACCTGGAAGGAAGGGACA +
Preference number: 5 (lower is better)
Translates to: KTARTSSSPNRTDPP*IPIVIVHRTWKEGT
Trigger: TGTCCCTTCCTTCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR CAA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGGGGATATGTCACAATTaGCCGTGCCCGGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ENPLKLSLQSWSSQEQRRGICHN*PCPVAL
Trigger: CAGAGCCACCGGGCACGGCAAATTGTGACATATCCC...CCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGGTTTGCCGGGTTCCCTaGGTCCTCAGACTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: ACLHGNTGSLKFMKAFHVVCRVP*VLRLLP
Trigger: AGGGAGCAGTCTGAGGACCAAGGGAACCCGGCAAAC...CACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS TCA 90 bp AGAAGGCTTCTGAGAGGAACATTTACAGGGGGAGTCAAGGCACACTaGATCCCTGGGCCATGCCCCAGCTCTGACCCACAGCACCATATA +
Preference number: 5 (lower is better)
Translates to: RRLLRGTFTGGVKAH*IPGPCPSSDPQHHI
Trigger: TATATGGTGCTGTGGGTCAGAGCTGGGGCATGGCCCAGGGATTCAGTGTGCCTTGACTCCCCCTGTAAATGTTCCTCTCAGAAGCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS TCA 90 bp CGAGCAGCAGCCCGAACAGGACAGACCCTCCTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGAAGGAAGGGACAGGAAGGAATGTCA +
Preference number: 5 (lower is better)
Translates to: RAAARTGQTLLGFPL*LSTEPGRKGQEGMS
Trigger: TGACATTCCTTCCTGTCCCTTCCTTCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS CCA 90 bp AAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACCTGTAATCCCAGCTAC +
Preference number: 5 (lower is better)
Translates to: KTARTSSSPNRTDPP*IPIVIVHRTCNPSY
Trigger: GTAGCTGGGATTACAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527577.5
CDS-3UTR CAA 90 bp GTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGT +
Preference number: 5 (lower is better)
Translates to: VGLPCKQDWSSKSPRAPLQDRPS*DSHCDC
Trigger: ACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTG...TAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PHMEHLACLHGNTGSLKFAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...AAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGTTCAGGGAACGGCATCAACAGAAGAAAGCTGGCACTGCTCAGGATGTCTTCTGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: CSGNGINRRKLALLRMSSAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...AGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATGCCGTTCCCTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGGGAGGGCACAGGGTATaGGCTCTCGAGCAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMGGHRV*ALEQRA
Trigger: GGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTCC...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCATCAGCCTACTGGGGTaGGCCACGTTGTATGTAGCT +
Preference number: 5 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPISLLG*ATLYVA
Trigger: AGCTACATACAACGTGGCCAACCCCAGTAGGCTGAT...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAACCTATAGCCAGCTaGGGTGGGGCTATTGAGAGT +
Preference number: 5 (lower is better)
Translates to: GLQRTHSSCHCKAGLPKSKPIAS*GGAIES
Trigger: ACTCTCAATAGCCCCACCCAAGCTGGCTATAGGTTT...GCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGAAACCTATAGCCAGCTaGGGTGGGGCTATTGAGAGT +
Preference number: 5 (lower is better)
Translates to: QEKADYAGTGSLGEALLVKPIAS*GGAIES
Trigger: ACTCTCAATAGCCCCACCCAAGCTGGCTATAGGTTT...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGATGTGTTGGTCTGGACTaGGGGGTGCAGGCATTCCCA +
Preference number: 5 (lower is better)
Translates to: QRTHSSCHCKAGLPKSKGCVGLD*GVQAFP
Trigger: TGGGAATGCCTGCACCCCCAAGTCCAGACCAACACA...TCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KWGFPANRTGLQSLPEPLRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...GAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTCTGGGGTTGGCCACGTaGTATGTAGCTGCGAATAGC +
Preference number: 5 (lower is better)
Translates to: PTYGTFGMPPWQHGIPEVLGLAT*YVAANS
Trigger: GCTATTCGCAGCTACATACAACGTGGCCAACCCCAG...AACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTCAGCTTCCCCAGTTTaGAGGTTTTTGAACTCAGGC +
Preference number: 5 (lower is better)
Translates to: QEKADYAGTGSLGEALLVSASPV*RFLNSG
Trigger: GCCTGAGTTCAAAAACCTCAAAACTGGGGAAGCTGA...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGGCTCTGACAGGAGGTaGTTTGTGCCACAATTTAAG +
Preference number: 5 (lower is better)
Translates to: ARESGLRRNGEFGRSSPGGSDRR*FVPQFK
Trigger: CTTAAATTGTGGCACAAACAACCTCCTGTCAGAGCC...ACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGCTTGGAATACAAGAGTaGTGCCTGAATCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWLGIQE*CLNLGL
Trigger: GAGTCCCAGATTCAGGCACAACTCTTGTATTCCAAG...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTGGGATATGTCACAATTaGCCGTGCCCGGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: PHMEHLACLHGNTGSLKFGICHN*PCPVAL
Trigger: CAGAGCCACCGGGCACGGCAAATTGTGACATATCCC...AAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS TCA 90 bp GCTGGTTGTCTCAAAAACCAAGGGCTGGAAGGCCAAGAAGGCTTCTaGGAGGAACATTTACAGGGGGAGTCAAGGCACACTGAATCCCTG +
Preference number: 5 (lower is better)
Translates to: AGCLKNQGLEGQEGF*EEHLQGESRHTESL
Trigger: CAGGGATTCAGTGTGCCTTGACTCCCCCTGTAAATGTTCCTCTCAGAAGCCTTCTTGGCCTTCCAGCCCTTGGTTTTTGAGACAACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR CAA 90 bp GGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTCAGGACAGACCCTCCTaGGATTCCCATTGTGATTGT +
Preference number: 5 (lower is better)
Translates to: GFPANRTGLQSLPEPLYLQDRPS*DSHCDC
Trigger: ACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTG...AAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: RESGLRRNGEFGRSSPGVQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...AACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWTCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: ESGLRRNGEFGRSSPGVDTCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...GTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGAGTCACCAGCAGCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: VDLGMKAPGCCQKWSHQQRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...CTGCTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 5 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGCAGCACCATATACCCTaGAGTAGGCTCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: LQTGLVFKVSQSPSILARQHHIP*SRLSPY
Trigger: ATAGGGACTGAGCCTACTCAAGGGTATATGGTGCTG...CCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415002.7
ENST00000437761.6
CDS-3UTR CAA 90 bp AAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTACCTGGGGTGCTGTTaGCCTAGTACTATAAATGTC +
Preference number: 5 (lower is better)
Translates to: KWGFPANRTGLQSLPEPLYLGCC*PSTINV
Trigger: GACATTTATAGTACTAGGCAAACAGCACCCCAGGTA...GAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTGCTTGGGTGGGGCTATaGAGAGTCAGCACCAGCACT +
Preference number: 5 (lower is better)
Translates to: CHCKAGLPKSKGGSMQSSAWVGL*RVSTST
Trigger: AGTGCTGGTGCTGACTCTCAATAGCCCCACCCAAGC...ACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCGTTTGCCGGGTTCCCTaGGTCCTCAGACTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SQSPSILARLLKLILFFPVCRVP*VLRLLP
Trigger: AGGGAGCAGTCTGAGGACCAAGGGAACCCGGCAAAC...GGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTTACCTGAGGTGCTGTTaGCCGGGTTCCCTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: ERMLIYSCPTLQRCTNDAYLRCC*PGSLGP
Trigger: AGGACCAAGGGAACCCGGCAAACAGCACCTCAGGTA...AGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAATCCTTTGAGCTCAGCTaGAGTCTCCTCAGGACTCAG +
Preference number: 5 (lower is better)
Translates to: EPTQAVTAKLVFPRAKEESFELS*SLLRTQ
Trigger: CTGAGTCCTGAGGAGACTCAAGCTGAGCTCAAAGGA...TTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS-3UTR CAA 90 bp CAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: QEKADYAGTGSLGEALLVVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: ARESGLRRNGEFGRSSPGVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...ACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LQTGLVFKVSQSPSILARRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...CCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 5 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGATGACCCTTGTTGATTaGGACAGCTTAACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQMTLVD*DSLTAP
Trigger: TGGGGCTGTTAAGCTGTCCAAATCAACAAGGGTCAT...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTCAGCTTCCCCAGTTTaGAGGTTTTTGAACTCAGGC +
Preference number: 5 (lower is better)
Translates to: AFHVREDAHILLPHPPKMSASPV*RFLNSG
Trigger: GCCTGAGTTCAAAAACCTCAAAACTGGGGAAGCTGA...CATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCAGTGACCACTTACTGTaGTGCGTTCTCATGTTATCC +
Preference number: 5 (lower is better)
Translates to: FKWGFPANRTGLQSLPEPSDHLL*CVLMLS
Trigger: GGATAACATGAGAACGCACAACAGTAAGTGGTCACT...GGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ACACCTGAGAAGCTGCTTCTACGACCTGCTGAGGACATAATGATAAACACACACTGTGTTGGTCTGGACTaGGGGGTGCAGGCATTCCCA +
Preference number: 5 (lower is better)
Translates to: TPEKLLLRPAEDIMINTHCVGLD*GVQAFP
Trigger: TGGGAATGCCTGCACCCCCAAGTCCAGACCAACACA...GTGTGTGTTTATCATTATGTCCTCAGCAGGTCGTAGAAGCAGCTTCTCAGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCAGTTTGCCGGGTTCCCTaGGTCCTCAGACTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSVCRVP*VLRLLP
Trigger: AGGGAGCAGTCTGAGGACCAAGGGAACCCGGCAAAC...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATTACCTGAGGTGCTGTTaGCCGGGTTCCCTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: NTGSLKFMKAFHVREDAHYLRCC*PGSLGP
Trigger: AGGACCAAGGGAACCCGGCAAACAGCACCTCAGGTA...ATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATTACCTGAGGTGCTGTTaGCCGGGTTCCCTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: HGIPEVYESVPCERGCSYYLRCC*PGSLGP
Trigger: AGGACCAAGGGAACCCGGCAAACAGCACCTCAGGTA...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS TCA 90 bp TTTTCAGTGGAAAGTCCAGTGGAAGCAAGGTGGGTCCTCACTTTCTaGGCACACACAGGAACCCAGTTCTCTAGAGCATCTGAAATGGCC +
Preference number: 5 (lower is better)
Translates to: FSVESPVEARWVLTF*AHTGTQFSRASEMA
Trigger: GGCCATTTCAGATGCTCTAGAGAACTGGGTTCCTGTGTGTGCTCAGAAAGTGAGGACCCACCTTGCTTCCACTGGACTTTCCACTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS TCA 90 bp CTCTGGGACAGGGTATCATTACTGAACTACCCCCTTCTAAGGGACTaGCCGAATGCCAGGAGTACACACTGTCAAAGACAAGACAACAGC +
Preference number: 5 (lower is better)
Translates to: LWDRVSLLNYPLLRD*PNARSTHCQRQDNS
Trigger: GCTGTTGTCTTGTCTTTGACAGTGTGTACTCCTGGCATTCGGTCAGTCCCTTAGAAGGGGGTAGTTCAGTAATGATACCCTGTCCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS-3UTR CAA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: EKADYAGTGSLGEALLVLKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...CAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: SLQTGLVFKVSQSPSILATCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...GGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000437761.6
ENST00000445143.6
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: KRKRTTQERGVWEKLSWCVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...ACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: KADYAGTGSLGEALLVLTVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...AGTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp ACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TQAVTAKLVFPRAKEEACRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...GCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTGCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: QTGLVFKVSQSPSILARLRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...CAACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: NGVTSRRTVFSDKDVPPFAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...AAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp AGCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: SKRKRTTQERGVWEKLSWPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...CCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 5 (lower is better)
Translates to: NNLRAAENPLKLSLQSWSALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...AGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 5 (lower is better)
Translates to: MPPWQHGIPEVYESVPCEALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...CTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGGATGGGTATCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPEGWVSA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGATACCCATCC...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR CAA 90 bp CTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGAATTCCATGCAGAGCTaGGAACACAACACTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LQTGLVFKVSQSPSILARNSMQS*EHNTSQ
Trigger: CTGAGAAGTGTTGTGTTCCAAGCTCTGCATGGAATT...CCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR CAA 90 bp TCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGTACCTGGGGTGCTGTTaGCCTAGTACTATAAATGTC +
Preference number: 5 (lower is better)
Translates to: SFKWGFPANRTGLQSLPEYLGCC*PSTINV
Trigger: GACATTTATAGTACTAGGCAAACAGCACCCCAGGTA...CTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTCTGGGGTTGGCCACGTaGTATGTAGCTGCGAATAGC +
Preference number: 5 (lower is better)
Translates to: VFPRAKEEACNLVQVTPTLGLAT*YVAANS
Trigger: GCTATTCGCAGCTACATACAACGTGGCCAACCCCAG...AGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTCACTGTCTACCTTGTTaGCTGAGTCTTCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: PTYGTFGMPPWQHGIPEVHCLPC*LSLLAF
Trigger: GAAAGCCAGAAGACTCAGCAAACAAGGTAGACAGTG...AACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGAGTGACCACTTACTGTaGTGCGTTCTCATGTTATCC +
Preference number: 5 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQSDHLL*CVLMLS
Trigger: GGATAACATGAGAACGCACAACAGTAAGTGGTCACT...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGCTGACAGGAGGTTGTTaGTGCCACAATTTAAGGACC +
Preference number: 5 (lower is better)
Translates to: ACLHGNTGSLKFMKAFHVLTGGC*CHNLRT
Trigger: GGTCCTTAAATTGTGGCACAAACAACCTCCTGTCAG...CACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTGTAGTGGTTGTGTCTaGGAATACAAGAGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: LQTGLVFKVSQSPSILARCSGCV*EYKSCA
Trigger: GGCACAACTCTTGTATTCCAAGACACAACCACTACA...CCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATTTAAGTACCATCCTGTaGGAGCTTCCTAACGCCCCT +
Preference number: 5 (lower is better)
Translates to: LACLHGNTGSLKFMKAFHLSTIL*ELPNAP
Trigger: AGGGGCGTTAGGAAGCTCCAACAGGATGGTACTTAA...ATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCGGCAAAACCCTACGGTaGTTTCTGCAAACAAATGTC +
Preference number: 5 (lower is better)
Translates to: SLQTGLVFKVSQSPSILAGKTLR*FLQTNV
Trigger: GACATTTGTTTGCAGAAACAACCGTAGGGTTTTGCC...GGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: LACLHGNTGSLKFMKAFHQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...ATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: KRKRTTQERGVWEKLSWCKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...ACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCTGGTGTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGAGTCACAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PGVDLGMKAPGCCQKWSHKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...GTGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAACACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp AGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTTAAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SGLRRNGEFGRSSPGVDLKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...TAAGTCAACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp GTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGAGTCACCAGCAGAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: VDLGMKAPGCCQKWSHQQKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...CTGCTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp GAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: EPTQAVTAKLVFPRAKEETCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...TTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000445143.6
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: TQAVTAKLVFPRAKEEACTCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...GCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000445143.6
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: CREPTQAVTAKLVFPRAKTCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...CTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000445143.6
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: VPCERGCSYTPAPPSKDVRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...TACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAACCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: LRAAENPLKLSLQSWSSQPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...TTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: RESGLRRNGEFGRSSPGVPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...AACACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCAAGAGAAAGCGGACTACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: ARESGLRRNGEFGRSSPGSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...ACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGCGTAGTCCGCTTTCTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTTCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 5 (lower is better)
Translates to: PHMEHLACLHGNTGSLKFSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...AAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 5 (lower is better)
Translates to: FGMPPWQHGIPEVYESVPSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...TGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTATCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 5 (lower is better)
Translates to: PCERGCSYTPAPPSKDVLSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...TAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGAGTCACCAGCAGTCAAACTTCCAACACTaGTTATACACTTGTAACCCC +
Preference number: 5 (lower is better)
Translates to: VDLGMKAPGCCQKWSHQQSNFQH*LYTCNP
Trigger: GGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGA...CTGCTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR CAA 90 bp TGTTCAGGGAACGGCATCAACAGAAGAAAGCTGGCACTGCTCAGGATGTCTTCTATGACCCTTGTTGATTaGGACAGCTTAACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: CSGNGINRRKLALLRMSSMTLVD*DSLTAP
Trigger: TGGGGCTGTTAAGCTGTCCAAATCAACAAGGGTCAT...AGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATGCCGTTCCCTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTATTACAGTATTGCCTTaGGGTCCAGGCACTCAACCT +
Preference number: 5 (lower is better)
Translates to: NNLRAAENPLKLSLQSWSITVLP*GPGTQP
Trigger: AGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAAT...AGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAAATTACAGTATTGCCTTaGGGTCCAGGCACTCAACCT +
Preference number: 5 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQITVLP*GPGTQP
Trigger: AGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAAT...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTTTACATTACAGTATaGCCTTTGGGTCCAGGCACT +
Preference number: 5 (lower is better)
Translates to: QTGLVFKVSQSPSILARLLYITV*PLGPGT
Trigger: AGTGCCTGGACCCAAAGGCAATACTGTAATGTAAAG...CAACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGGAGGGCACAGGGTATaGGCTCTCGAGCAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: ILARLLKLILFFPNRIHLGGHRV*ALEQRA
Trigger: GGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTCC...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCATCAGCCTACTGGGGTaGGCCACGTTGTATGTAGCT +
Preference number: 5 (lower is better)
Translates to: SQSPSILARLLKLILFFPISLLG*ATLYVA
Trigger: AGCTACATACAACGTGGCCAACCCCAGTAGGCTGAT...GGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAACAGGTTCTTCAGCCTTaGGAATCTAGGACTTGCACC +
Preference number: 5 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQQVLQP*ESRTCT
Trigger: GGTGCAAGTCCTAGATTCCAAAGGCTGAAGAACCTG...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CATGTAGTAGAGTGTTCACTCTGTAACTGTGTGTGGCAAAGCCAAGATATCCTAGGGATATGTCACAATTaGCCGTGCCCGGTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: HVVECSLCNCVWQSQDILGICHN*PCPVAL
Trigger: CAGAGCCACCGGGCACGGCAAATTGTGACATATCCC...TAGGATATCTTGGCTTTGCCACACACAGTTACAGAGTGAACACTCTACTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGT +
Preference number: 5 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGQDRPS*DSHCDC
Trigger: ACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTG...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: KNNLRAAENPLKLSLQSWQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...CCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: LQRTHSSCHCKAGLPKSKVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...TTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: FPANRTGLQSLPEPLYLSVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...GCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCAGGCTGCTGCCAGAAATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATACGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SRLLPEMESPAEELFSLIRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...TATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCATTTCTGGCAGCAGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp GTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTACACGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: VFSDKDVPPFSSCSLKLHAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...GTGTAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp GTTGACTTAGGGATGAAGGCTCCAGGCTGCTGCCAGAAATGGAGTCACCAGCAGTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: VDLGMKAPGCCQKWSHQQSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...CTGCTGGTGACTCCATTTCTGGCAGCAGCCTGGAGCCTTCATCCCTAAGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp CCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 5 (lower is better)
Translates to: PKSKGGSMQSSSSHTYFTALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...AGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 5 (lower is better)
Translates to: CHCKAGLPKSKGGSMQSSSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...ACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGTCGATTTTCAGCCACTaGTACCTCTCTAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQSIFSH*YLSKFS
Trigger: TGAAAACTTAGAGAGGTACAAGTGGCTGAAAATCGA...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTTCGATTTTCAGCCACTaGTACCTCTCTAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: GFPANRTGLQSLPEPLYLSIFSH*YLSKFS
Trigger: TGAAAACTTAGAGAGGTACAAGTGGCTGAAAATCGA...AAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTCGATTTTCAGCCACTaGTACCTCTCTAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: AFHVREDAHILLPHPPKMSIFSH*YLSKFS
Trigger: TGAAAACTTAGAGAGGTACAAGTGGCTGAAAATCGA...CATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTACCCCTGCAGATCTGTaGTTATTAAGGATGACCTTT +
Preference number: 5 (lower is better)
Translates to: PTYGTFGMPPWQHGIPEVTPADL*LLRMTF
Trigger: AAAGGTCATCCTTAATAACAACAGATCTGCAGGGGT...AACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTACAAATGACTGCTGGTaGTCTCAAAAACCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: NNLRAAENPLKLSLQSWSTNDCW*SQKPRA
Trigger: AGCCCTTGGTTTTTGAGACAACCAGCAGTCATTTGT...AGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR CAA 90 bp AATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTAGTCACAGCAACTTTTaGCAGAAAGCAACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: NNLRAAENPLKLSLQSWSSHSNF*QKATPK
Trigger: CTTTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGACT...AGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTCTTTACATTACAGTATaGCCTTTGGGTCCAGGCACT +
Preference number: 5 (lower is better)
Translates to: NNLRAAENPLKLSLQSWSLYITV*PLGPGT
Trigger: AGTGCCTGGACCCAAAGGCAATACTGTAATGTAAAG...AGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAATAGGAGGGCACAGGGTATaGGCTCTCGAGCAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: KDVLMMLTDYIQGARGKIGGHRV*ALEQRA
Trigger: GGCTCTCTGCTCGAGAGCCAATACCCTGTGCCCTCC...TATTTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCATTCAAGACCAAGTTaGGCAAATAGATTAGCATCT +
Preference number: 5 (lower is better)
Translates to: PSSGASLQTGLVFKVSQSHSRPS*ANRLAS
Trigger: AGATGCTAATCTATTTGCCAAACTTGGTCTTGAATG...GCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTCACCTCATGCTATaGGGTAACTTTCCAGTAAAA +
Preference number: 5 (lower is better)
Translates to: PANRTGLQSLPEPLYLSQVHLML*GNFPVK
Trigger: TTTTACTGGAAAGTTACCCAATAGCATGAGGTGAAC...CTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGTTCACCTCATGCTATaGGGTAACTTTCCAGTAAAA +
Preference number: 5 (lower is better)
Translates to: LTPTYGTFGMPPWQHGIPVHLML*GNFPVK
Trigger: TTTTACTGGAAAGTTACCCAATAGCATGAGGTGAAC...AGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCCAGGTTCTTCAGCCTTaGGAATCTAGGACTTGCACC +
Preference number: 5 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFQVLQP*ESRTCT
Trigger: GGTGCAAGTCCTAGATTCCAAAGGCTGAAGAACCTG...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ACACCCACATATGGAACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGAGCAGCCTTTATTCTaGTTTTCCCAGGTAAATGTG +
Preference number: 5 (lower is better)
Translates to: TPTYGTFGMPPWQHGIPEEQPLF*FSQVNV
Trigger: CACATTTACCTGGGAAAACAAGAATAAAGGCTGCTC...TTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGTTCCATATGTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCACTAGTAGGTGGTCATaGGAGTGTGGCTACAGTTAT +
Preference number: 5 (lower is better)
Translates to: AGLPKSKGGSMQSSSSHTTSRWS*ECGYSY
Trigger: ATAACTGTAGCCACACTCCAATGACCACCTACTAGT...GGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCCTCAGGACTCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: CKAGLPKSKGGSMQSSSSPQDSA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGAGTCCTGAGG...ACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS-3UTR CAA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGCAGGACAGACCCTCCTaGGATTCCCATTGTGATTGT +
Preference number: 5 (lower is better)
Translates to: LENIKPLECGSKRKRTTQQDRPS*DSHCDC
Trigger: ACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTG...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: SQSPSILARLLKLILFFPQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...GGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: REPTQAVTAKLVFPRAKEKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...CTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAAGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: SSCHCKAGLPKSKGGSMQVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...TTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: FHVREDAHILLPHPPKMYVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...GTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: KLVFPRAKEEACNLVQVTRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...TGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAAGCAGGAACGGGGAGTTaGGGAGAAGCTCTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEAGTGS*GEALLV
Trigger: CACCAGGAGAGCTTCTCCCAAACTCCCCGTTCCTGC...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCACCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: MKAFHVREDAHILLPHPPPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...TGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: CREPTQAVTAKLVFPRAKPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...CTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: SFKWGFPANRTGLQSLPESILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...CTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: GFPANRTGLQSLPEPLYLSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...AAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTTCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 5 (lower is better)
Translates to: PKSKGGSMQSSSSHTYFTSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...AGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTTCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 5 (lower is better)
Translates to: CKAGLPKSKGGSMQSSSSSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...ACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATACCCCTGCAGATCTGTaGTTATTAAGGATGACCTTT +
Preference number: 5 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNTPADL*LLRMTF
Trigger: AAAGGTCATCCTTAATAACAACAGATCTGCAGGGGT...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCACCCCTGCAGATCTGTaGTTATTAAGGATGACCTTT +
Preference number: 5 (lower is better)
Translates to: AGLPKSKGGSMQSSSSHTTPADL*LLRMTF
Trigger: AAAGGTCATCCTTAATAACAACAGATCTGCAGGGGT...GGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGATGTCTTCTTTCAGTaGCTACCATTAAGCATACTG +
Preference number: 5 (lower is better)
Translates to: EPTQAVTAKLVFPRAKEEDVFFQ*LPLSIL
Trigger: CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATC...TTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTGGATGGGTATCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: VFPRAKEEACNLVQVTPTGWVSA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGATACCCATCC...AGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR CAA 90 bp GCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGCCCCTCTATCTTAGCCAGGTTTCAAACTTCCAACACTaGTTATACACTTGTAACCCC +
Preference number: 5 (lower is better)
Translates to: ANRTGLQSLPEPLYLSQVSNFQH*LYTCNP
Trigger: GGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGA...AACCTGGCTAAGATAGAGGGGCTCTGGGAGACTTTGAAGACCAGTCCTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000652086.1
CDS-3UTR CAA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCATTGTCCACAGAACCCTaGAGTAGGCTCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSLSTEP*SRLSPY
Trigger: ATAGGGACTGAGCCTACTCAAGGGTTCTGTGGACAA...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445143.6
CDS-3UTR CAA 90 bp AAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGCTTTACATTACAGTATaGCCTTTGGGTCCAGGCACT +
Preference number: 5 (lower is better)
Translates to: KNNLRAAENPLKLSLQSWLYITV*PLGPGT
Trigger: AGTGCCTGGACCCAAAGGCAATACTGTAATGTAAAG...CCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCTTCAAGTGGGGCTTCCCTGCAAACAGGACTGGTCTTCAAAGTCTCCCAGAGATTAGTTCAGATCTGTaGGCAGCAACAGAAACTAAT +
Preference number: 5 (lower is better)
Translates to: SFKWGFPANRTGLQSLPEISSDL*AATETN
Trigger: ATTAGTTTCTGTTGCTGCCAACAGATCTGAACTAAT...CTCTGGGAGACTTTGAAGACCAGTCCTGTTTGCAGGGAAGCCCCACTTGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGCCAGAAGTCCTCTAGCTCTGCATTAAGGATCTTGTTGTCCCTGACTGACACCTTGCATAGTTTCCTCTaGTGTAAAGTGAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: CQKSSSSALRILLSLTDTLHSFL*CKVRCK
Trigger: CTTGCACCTCACTTTACACAAGAGGAAACTATGCAA...GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGAGCTAGAGGACTTCTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTATTTTATACAGCTTGGGTGGGGCTATaGAGAGTCAGCACCAGCACT +
Preference number: 5 (lower is better)
Translates to: KPQTSVSVLRAVTKVFYTAWVGL*RVSTST
Trigger: AGTGCTGGTGCTGACTCTCAATAGCCCCACCCAAGC...TGTATAAAATACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCGAATCGGTAGCCTCTTaGGTATGGCCACTATGGTGG +
Preference number: 5 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFESVAS*VWPLWW
Trigger: CCACCATAGTGGCCATACCAAAGAGGCTACCGATTC...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATCTGACAGGAGGTTGTTaGTGCCACAATTTAAGGACC +
Preference number: 5 (lower is better)
Translates to: HGIPEVYESVPCERGCSYLTGGC*CHNLRT
Trigger: GGTCCTTAAATTGTGGCACAAACAACCTCCTGTCAG...ATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGCTTCTGAAAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTCTGACAGGAGGTTGTTaGTGCCACAATTTAAGGACC +
Preference number: 5 (lower is better)
Translates to: ELLKASNICECAKSRYKGLTGGC*CHNLRT
Trigger: GGTCCTTAAATTGTGGCACAAACAACCTCCTGTCAG...ACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTTTCAGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCCTTGGAATACAAGAGTaGTGCCTGAATCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: SQSPSILARLLKLILFFPLGIQE*CLNLGL
Trigger: GAGTCCCAGATTCAGGCACAACTCTTGTATTCCAAG...GGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCGATCCAGCTAACTTTGCATAGTTTCCTCTTGTGTAAAGTGAGGTGCAAGTACTTAAGTACCATCCTGTaGGAGCTTCCTAACGCCCCT +
Preference number: 5 (lower is better)
Translates to: AIQLTLHSFLLCKVRCKYLSTIL*ELPNAP
Trigger: AGGGGCGTTAGGAAGCTCCAACAGGATGGTACTTAA...GTACTTGCACCTCACTTTACACAAGAGGAAACTATGCAAAGTTAGCTGGATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAAGCTGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGTTAAGTACCATCCTGTaGGAGCTTCCTAACGCCCCT +
Preference number: 5 (lower is better)
Translates to: KAGTAQDVFFQLLPLSILLSTIL*ELPNAP
Trigger: AGGGGCGTTAGGAAGCTCCAACAGGATGGTACTTAA...CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAGGCAAAACCCTACGGTaGTTTCTGCAAACAAATGTC +
Preference number: 5 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQGKTLR*FLQTNV
Trigger: GACATTTGTTTGCAGAAACAACCGTAGGGTTTTGCC...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS TCA 90 bp TTGTTATACACTTGTAACCCTCCTACGTGTCCTTTGAGCTCAGCTTaGGTCTCCTCAGGACTCAGCTTTGGTAATGAGACACGCATCAAA +
Preference number: 5 (lower is better)
Translates to: LLYTCNPPTCPLSSA*VSSGLSFGNETRIK
Trigger: TTTGATGCGTGTCTCATTACCAAAGCTGAGTCCTGAGGAGACTCAAGCTGAGCTCAAAGGACACGTAGGAGGGTTACAAGTGTATAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS TCA 90 bp ACTTCCAACACTTGTTATACACTTGTAACCCTCCTACGTGTCCTTTaGGCTCAGCTTGAGTCTCCTCAGGACTCAGCTTTGGTAATGAGA +
Preference number: 5 (lower is better)
Translates to: TSNTCYTLVTLLRVL*AQLESPQDSALVMR
Trigger: TCTCATTACCAAAGCTGAGTCCTGAGGAGACTCAAGCTGAGCTCAAAGGACACGTAGGAGGGTTACAAGTGTATAACAAGTGTTGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS-3UTR CAA 90 bp GGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCTCAGGACAGACCCTCCTaGGATTCCCATTGTGATTGT +
Preference number: 5 (lower is better)
Translates to: GSMQSSSSHTYFTLRLLPQDRPS*DSHCDC
Trigger: ACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTG...AGGAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: LENIKPLECGSKRKRTTQQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAAGCTGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: KAGTAQDVFFQLLPLSILQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LACLHGNTGSLKFMKAFHKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...ATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAGAGGAAAAATAATCTGAGGGCTGCAGAGAACCCACTCAAGCTGTCACTGCAAGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: QRKNNLRAAENPLKLSLQVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...TTGCAGTGACAGCTTGAGTGGGTTCTCTGCAGCCCTCAGATTATTTTTCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: GLPKSKGGSMQSSSSHTYVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...GTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGTTCAGGGAACGGCATCAACAGAAGAAAGCTGGCACTGCTCAGGATGTCTTCTCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: CSGNGINRRKLALLRMSSPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...AGAAGACATCCTGAGCAGTGCCAGCTTTCTTCTGTTGATGCCGTTCCCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGCAGAGAACCCACTCAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAATCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: LQRTHSSCHCKAGLPKSKSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...TTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTGAGTGGGTTCTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGGAAAAGCATCATTCATaGCACTCGGTTTGTCCAACA +
Preference number: 5 (lower is better)
Translates to: CERGCSYTPAPPSKDVLMEKHHS*HSVCPT
Trigger: TGTTGGACAAACCGAGTGCAATGAATGATGCTTTTC...CATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAAGCTGTCACTGCAAAGCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATGATGTCTTCTTTCAGTaGCTACCATTAAGCATACTG +
Preference number: 5 (lower is better)
Translates to: QAVTAKLVFPRAKEEACNDVFFQ*LPLSIL
Trigger: CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATC...ATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGCTTTGCAGTGACAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCAGCACCATATACCCTaGAGTAGGCTCAGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: GGSMQSSSSHTYFTLRLLQHHIP*SRLSPY
Trigger: ATAGGGACTGAGCCTACTCAAGGGTATATGGTGCTG...AAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS-3UTR CAA 90 bp TTAAGGATCTTGTTGTCCCTGACTGACACCCACATATGGAACATTTGGCATGCCAATTCCATGCAGAGCTaGGAACACAACACTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LRILLSLTDTHIWNIWHANSMQS*EHNTSQ
Trigger: CTGAGAAGTGTTGTGTTCCAAGCTCTGCATGGAATT...GGCATGCCAAATGTTCCATATGTGGGTGTCAGTCAGGGACAACAAGATCCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426650.7
ENST00000652086.1
CDS-3UTR CAA 90 bp GAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCATATCCCAACTCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: EVYESVPCERGCSYTPAPYPNSA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGAGTTGGGATA...TGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533403.6
CDS-3UTR CAA 90 bp GCCAGAAATGGAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCATATCCCAACTCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: ARNGVTSRRTVFSDKDVPYPNSA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGAGTTGGGATA...TGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTCCATTTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533403.6
ENST00000643183.1
CDS-3UTR CAA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAGTCACAGCAACTTTTaGCAGAAAGCAACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGSHSNF*QKATPK
Trigger: CTTTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGACT...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGCCCATCAAGAATCCCTCAGGGGGATCTGTTAGCATTAGTTCAGATCTGTTGGTTGCATAGTTTCCTCTaGTGTAAAGTGAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: SPSRIPQGDLLALVQICWLHSFL*CKVRCK
Trigger: CTTGCACCTCACTTTACACAAGAGGAAACTATGCAA...CCAACAGATCTGAACTAATGCTAACAGATCCCCCTGAGGGATTCTTGATGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTACAGTAAAAAGAACCTaGAGTTTCCCAGTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: TFGMPPWQHGIPEVYESVTVKRT*SFPVQS
Trigger: GGACTGAACTGGGAAACTCAAGGTTCTTTTTACTGT...AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTACAGTAAAAAGAACCTaGAGTTTCCCAGTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: ERMLIYSCPTLQRCTNDATVKRT*SFPVQS
Trigger: GGACTGAACTGGGAAACTCAAGGTTCTTTTTACTGT...AGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAGGGCTCTGACAGGAGGTaGTTTGTGCCACAATTTAAG +
Preference number: 5 (lower is better)
Translates to: LENIKPLECGSKRKRTTQGSDRR*FVPQFK
Trigger: CTTAAATTGTGGCACAAACAACCTCCTGTCAGAGCC...CTGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTGCCACAATTTAAGGACCAAGCTATTCTGGGAAGCCCAGAACAGTCTTTCCTTTGTAGTGGTTGTGTCTaGGAATACAAGAGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: VPQFKDQAILGSPEQSFLCSGCV*EYKSCA
Trigger: GGCACAACTCTTGTATTCCAAGACACAACCACTACA...AAGGAAAGACTGTTCTGGGCTTCCCAGAATAGCTTGGTCCTTAAATTGTGGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: PSILARLLKLILFFPNRIQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: SDKDVPPFSSCSLKLHRSQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...GGACCTGTGTAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR CAA 90 bp ACATTTGGCATGCCTCCATGGCAACACGGGATCCCTGAAGTTTATGAAAGCGTTAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: TFGMPPWQHGIPEVYESVKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...AACGCTTTCATAAACTTCAGGGATCCCGTGTTGCCATGGAGGCATGCCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCACGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: FGKYQAFRMWQQEKADYARVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: EEACNLVQVTPTSLLDFFRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGGATGCAGATGGTAAAACATACCCCTGCAGATCTGTTGTTATTAAGGATGACCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LDADGKTYPCRSVVIKDDRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...GTCATCCTTAATAACAACAGATCTGCAGGGGTATGTTTTACCATCTGCATCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCTGGTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: AGLPKSKGGSMQSSSSHTSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...GGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTTCCATGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTATCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: VPCERGCSYTPAPPSKDVSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...TACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCAAGGGTGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 5 (lower is better)
Translates to: QKSIIHCTRFVQQSIIKGALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...ACCCTTGATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATATACTCCTTCTGCATTAAGGATCTaGTTGTCCCTGACTGACACC +
Preference number: 5 (lower is better)
Translates to: IPEVYESVPCERGCSYTPSALRI*LSLTDT
Trigger: GGTGTCAGTCAGGGACAACAAGATCCTTAATGCAGA...AGGAGTATATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAGAAAAGCATCATTCATaGCACTCGGTTTGTCCAACA +
Preference number: 5 (lower is better)
Translates to: PSKDVLMMLTDYIQGARGEKHHS*HSVCPT
Trigger: TGTTGGACAAACCGAGTGCAATGAATGATGCTTTTC...TCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGTCAAACTTCCAACACTaGTTATACACTTGTAACCCC +
Preference number: 5 (lower is better)
Translates to: ERGCSYTPAPPSKDVLMMSNFQH*LYTCNP
Trigger: GGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGA...CATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000652086.1
CDS-3UTR CAA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCATGACCCTTGTTGATTaGGACAGCTTAACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFMTLVD*DSLTAP
Trigger: TGGGGCTGTTAAGCTGTCCAAATCAACAAGGGTCAT...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCAAATATACCCATACCTaGAAGCCCCCAGTACATTCA +
Preference number: 5 (lower is better)
Translates to: LPKSKGGSMQSSSSHTYFKYTHT*KPPVHS
Trigger: TGAATGTACTGGGGGCTTCAAGGTATGGGTATATTT...GAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCACAGTAAAAAGAACCTaGAGTTTCCCAGTTCAGTCC +
Preference number: 5 (lower is better)
Translates to: PRAKEEACNLVQVTPTSLTVKRT*SFPVQS
Trigger: GGACTGAACTGGGAAACTCAAGGTTCTTTTTACTGT...GAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCCTTCAGCTTCCCCAGTTTaGAGGTTTTTGAACTCAGGC +
Preference number: 5 (lower is better)
Translates to: GSMQSSSSHTYFTLRLLPSASPV*RFLNSG
Trigger: GCCTGAGTTCAAAAACCTCAAAACTGGGGAAGCTGA...AGGAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTCACTGTCTACCTTGTTaGCTGAGTCTTCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLHCLPC*LSLLAF
Trigger: GAAAGCCAGAAGACTCAGCAAACAAGGTAGACAGTG...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGAAATTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATGAATCGGTAGCCTCTTaGGTATGGCCACTATGGTGG +
Preference number: 5 (lower is better)
Translates to: KKFLHLQKSAYAIKYSQDESVAS*VWPLWW
Trigger: CCACCATAGTGGCCATACCAAAGAGGCTACCGATTC...ATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAACCACAGAATCGGTAGCCTCTTaGGTATGGCCACTATGGTGG +
Preference number: 5 (lower is better)
Translates to: CRSVVIKDDLWKSQTVTTESVAS*VWPLWW
Trigger: CCACCATAGTGGCCATACCAAAGAGGCTACCGATTC...TGTGGTTACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CATGTAGTAGAGTGTTCACTCTGTAACTGTGTGTGGCAAAGCCAAGATATCCTAGGCTCTGACAGGAGGTaGTTTGTGCCACAATTTAAG +
Preference number: 5 (lower is better)
Translates to: HVVECSLCNCVWQSQDILGSDRR*FVPQFK
Trigger: CTTAAATTGTGGCACAAACAACCTCCTGTCAGAGCC...TAGGATATCTTGGCTTTGCCACACACAGTTACAGAGTGAACACTCTACTACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGGGGACAATCCAATGGGCTTATCACCACCCAATACTGAACACTATGACAGTTGGCAAAACCCTACGGTaGTTTCTGCAAACAAATGTC +
Preference number: 5 (lower is better)
Translates to: KGTIQWAYHHPILNTMTVGKTLR*FLQTNV
Trigger: GACATTTGTTTGCAGAAACAACCGTAGGGTTTTGCC...AACTGTCATAGTGTTCAGTATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS TCA 90 bp AGAATGTCATGGTTAAACCAAGTGTGGGTTTTAGAGCCCAACAGCTaGCTTCTAGTTCTAAGGCTGAAGGCTAGGTTTATCACCATGGAA +
Preference number: 5 (lower is better)
Translates to: RMSWLNQVWVLEPNS*LLVLRLKARFITME
Trigger: TTCCATGGTGATAAACCTAGCCTTCAGCCTTAGAACTAGAAGTCAGCTGTTGGGCTCTAAAACCCACACTTGGTTTAACCATGACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS GCA 90 bp AGCTCATTTTCCCTCAAGCGGGTTGTGACGTCGTTGAAATTGCAATaGTCAAACTTCCAACACTTGTTATACACTTGTAACCCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SSFSLKRVVTSLKLQ*SNFQHLLYTCNPAL
Trigger: CAAAGCTGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGACGTCACAACCCGCTTGAGGGAAAATGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000528700.2
ENST00000528987.1
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS GCA 90 bp AGCTCATTTTCCCTCAAGCGGGTTGTGACGTCGTTGAAATTGCAATaGTCAAACTTCCAACACTTGTTATACACTTGTAACCCCAATTCC +
Preference number: 5 (lower is better)
Translates to: SSFSLKRVVTSLKLQ*SNFQHLLYTCNPNS
Trigger: GGAATTGGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGACGTCACAACCCGCTTGAGGGAAAATGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426650.7
CDS-3UTR CAA 90 bp TACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTACAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: YPCRSVVIKDDLWKSQTVQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...TACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ACCATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCTTCTTGCAGCAGTAGTACAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: TIFKLFVKVTQVLLAAVVQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...TACTACTGCTGCAAGAAGGACCTGTGTAACTTTAACGAACAGCTTGAAAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR CAA 90 bp CCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: PKSKGGSMQSSSSHTYFTKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...AGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGCTTCTGAAAGCCTCAAACATCTGTGAGTGTGCTAAGAGCCGTTACAAAGGTAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: ELLKASNICECAKSRYKGKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...ACCTTTGTAACGGCTCTTAGCACACTCACAGATGTTTGAGGCTTTCAGAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AACACGGGATCCCTGAAGTTTATGAAAGCGTTCCATGTGAGAGAGGATGCTCATAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: NTGSLKFMKAFHVREDAHKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...ATGAGCATCCTCTCTCACATGGAACGCTTTCATAAACTTCAGGGATCCCGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLTCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000445143.6
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTACACGCATTAAGGATCTTGTaGTCCCTGACTGACACCCAC +
Preference number: 5 (lower is better)
Translates to: VFSDKDVPPFSSCSLKLHALRIL*SLTDTH
Trigger: GTGGGTGTCAGTCAGGGACAACAAGATCCTTAATGC...GTGTAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp TCCCAGAGCCCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCTCGATTTTCAGCCACTaGTACCTCTCTAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: SQSPSILARLLKLILFFPSIFSH*YLSKFS
Trigger: TGAAAACTTAGAGAGGTACAAGTGGCTGAAAATCGA...GGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGGGCTCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTCTTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTGATGTCTTCTTTCAGTaGCTACCATTAAGCATACTG +
Preference number: 5 (lower is better)
Translates to: VFPRAKEEACNLVQVTPTDVFFQ*LPLSIL
Trigger: CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATC...AGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTTCAGTCACAGCAACTTTTaGCAGAAAGCAACCCCAAAG +
Preference number: 5 (lower is better)
Translates to: EEACNLVQVTPTSLLDFFSHSNF*QKATPK
Trigger: CTTTGGGGTTGCTTTCTGCAAAAAGTTGCTGTGACT...GAAGAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTACCTGGGGTGCTGTTaGCCTAGTACTATAAATGTC +
Preference number: 5 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFYLGCC*PSTINV
Trigger: GACATTTATAGTACTAGGCAAACAGCACCCCAGGTA...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGGGGACAATCCAATGGGCTTATCACCACCCAATACTGAACACTATGACAGTTAAATATACCCATACCTaGAAGCCCCCAGTACATTCA +
Preference number: 5 (lower is better)
Translates to: KGTIQWAYHHPILNTMTVKYTHT*KPPVHS
Trigger: TGAATGTACTGGGGGCTTCAAGGTATGGGTATATTT...AACTGTCATAGTGTTCAGTATTGGGTGGTGATAAGCCCATTGGATTGTCCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCAAAATATACCCATACCTaGAAGCCCCCAGTACATTCA +
Preference number: 5 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSKYTHT*KPPVHS
Trigger: TGAATGTACTGGGGGCTTCAAGGTATGGGTATATTT...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGTGAGAGAGGATGCTCATATACTCCTGCCCCACCCTCCAAAGATGTACTAATGATTAGTTCAGATCTGTaGGCAGCAACAGAAACTAAT +
Preference number: 5 (lower is better)
Translates to: CERGCSYTPAPPSKDVLMISSDL*AATETN
Trigger: ATTAGTTTCTGTTGCTGCCAACAGATCTGAACTAAT...CATTAGTACATCTTTGGAGGGTGGGGCAGGAGTATATGAGCATCCTCTCTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAACCACACAGGTTCTTCAGCCTTaGGAATCTAGGACTTGCACC +
Preference number: 5 (lower is better)
Translates to: CRSVVIKDDLWKSQTVTTQVLQP*ESRTCT
Trigger: GGTGCAAGTCCTAGATTCCAAAGGCTGAAGAACCTG...TGTGGTTACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAAGCTGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGGAGCAGCCTTTATTCTaGTTTTCCCAGGTAAATGTG +
Preference number: 5 (lower is better)
Translates to: KAGTAQDVFFQLLPLSILEQPLF*FSQVNV
Trigger: CACATTTACCTGGGAAAACAAGAATAAAGGCTGCTC...CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGCATATACTAGTAGGTGGTCATaGGAGTGTGGCTACAGTTAT +
Preference number: 5 (lower is better)
Translates to: WHCSGCLLSVATIKHTAYTSRWS*ECGYSY
Trigger: ATAACTGTAGCCACACTCCAATGACCACCTACTAGT...ATATGCAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ACTCCTGCCCCACCCTCCAAAGATGTACTAATGATGCTAACTGACTACATCCAACTCTCTGAACCCCAATaGTCTCTGATCTATAAAATG +
Preference number: 5 (lower is better)
Translates to: TPAPPSKDVLMMLTDYIQLSEPQ*SLIYKM
Trigger: CATTTTATAGATCAGAGACAATTGGGGTTCAGAGAG...TTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGAGGGTGGGGCAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CATGTAGTAGAGTGTTCACTCTGTAACTGTGTGTGGCAAAGCCAAGATATCCTATGTAGTGGTTGTGTCTaGGAATACAAGAGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: HVVECSLCNCVWQSQDILCSGCV*EYKSCA
Trigger: GGCACAACTCTTGTATTCCAAGACACAACCACTACA...TAGGATATCTTGGCTTTGCCACACACAGTTACAGAGTGAACACTCTACTACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCTGATAAGGATGTCCCACCATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: SDKDVPPFSSCSLKLHRSVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...GGACCTGTGTAACTTTAACGAACAGCTTGAAAATGGTGGGACATCCTTATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp GAGTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: ESPAEELFSLIRMSHHFQVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...TTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp TCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SILARLLKLILFFPNRIHRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...ATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: VTSRRTVFSDKDVPPFSSPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...GCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp CTGGATGCAGATGGTAAAACATACCCCTGCAGATCTGTTGTTATTAAGGATGACGAAAAGCATCATTCATaGCACTCGGTTTGTCCAACA +
Preference number: 5 (lower is better)
Translates to: LDADGKTYPCRSVVIKDDEKHHS*HSVCPT
Trigger: TGTTGGACAAACCGAGTGCAATGAATGATGCTTTTC...GTCATCCTTAATAACAACAGATCTGCAGGGGTATGTTTTACCATCTGCATCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCAGATGTCTTCTTTCAGTaGCTACCATTAAGCATACTG +
Preference number: 5 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSDVFFQ*LPLSIL
Trigger: CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATC...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GTCACCAGCAGAAGAACTGTTTTCTCTGATAAGGATGTCCCACCATTTTCAAGCTCAAACTTCCAACACTaGTTATACACTTGTAACCCC +
Preference number: 5 (lower is better)
Translates to: VTSRRTVFSDKDVPPFSSSNFQH*LYTCNP
Trigger: GGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGA...GCTTGAAAATGGTGGGACATCCTTATCAGAGAAAACAGTTCTTCTGCTGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000652086.1
CDS-3UTR CAA 90 bp TCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATATTACAGTATTGCCTTaGGGTCCAGGCACTCAACCT +
Preference number: 5 (lower is better)
Translates to: SILARLLKLILFFPNRIHITVLP*GPGTQP
Trigger: AGGTTGAGTGCCTGGACCCAAAGGCAATACTGTAAT...ATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTGAATCTTGAGATTCATTCACTAGAATACACAGGGAAAAGGAAAAAGTTTGCCAAACCTATAGCCAGCTaGGGTGGGGCTATTGAGAGT +
Preference number: 5 (lower is better)
Translates to: LNLEIHSLEYTGKRKKFAKPIAS*GGAIES
Trigger: ACTCTCAATAGCCCCACCCAAGCTGGCTATAGGTTT...GGCAAACTTTTTCCTTTTCCCTGTGTATTCTAGTGAATGAATCTCAAGATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CCCTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCGAGCAGCCTTTATTCTaGTTTTCCCAGGTAAATGTG +
Preference number: 5 (lower is better)
Translates to: PSILARLLKLILFFPNRIEQPLF*FSQVNV
Trigger: CACATTTACCTGGGAAAACAAGAATAAAGGCTGCTC...GATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGAAATTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATCTTGGAATACAAGAGTaGTGCCTGAATCTGGGACTC +
Preference number: 5 (lower is better)
Translates to: KKFLHLQKSAYAIKYSQDLGIQE*CLNLGL
Trigger: GAGTCCCAGATTCAGGCACAACTCTTGTATTCCAAG...ATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCAAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAKSDEQ*TAVLQS
Trigger: TGACTGCAAAACAGCCGTCAATTGTTCATCTGATTT...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAAACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: SQVAQANFILSQQDPFGKTCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...TTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000437761.6
ENST00000445143.6
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ATTTTCAAGCTGTTCGTTAAAGTTACACAGGTCCTTCTTGCAGCAGTAGTACGTGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: IFKLFVKVTQVLLAAVVRVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...ACGTACTACTGCTGCAAGAAGGACCTGTGTAACTTTAACGAACAGCTTGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000643183.1
ENST00000651485.1
ENST00000652086.1
CDS-3UTR CAA 90 bp TATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTCGGGTTGTGACGTCGTaGAAATTGCAATGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: YLSQVAQANFILSQQDPFRVVTS*KLQCSN
Trigger: GTTTGAGCATTGCAATTTCAACGACGTCACAACCCG...AAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AACTGTAACCACAAAGGGTGTCCCCACTGCATTCATACTATATACACACATACCCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: NCNHKGCPHCIHTIYTHTPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...GGTATGTGTGTATATAGTATGAATGCAGTGGGGACACCCTTTGTGGTTACAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTTGGAAAATATCAAGCCTTTAGAATGTGGCAGCAAGAGAAAGCGGACTACGCACCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: FGKYQAFRMWQQEKADYAPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...TGCGTAGTCCGCTTTCTCTTGCTGCCACATTCTAAAGGCTTGATATTTTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGCATATCCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: WHCSGCLLSVATIKHTAYPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...ATATGCAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCCAAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCATCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: FPRAKEEACNLVQVTPTSSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...TGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTTGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGGCACTGCTCAGGATGTCTTCTTTCAGTTGCTACCATTAAGCATACTGCATATTCGATTTTCAGCCACTaGTACCTCTCTAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: WHCSGCLLSVATIKHTAYSIFSH*YLSKFS
Trigger: TGAAAACTTAGAGAGGTACAAGTGGCTGAAAATCGA...ATATGCAGTATGCTTAATGGTAGCAACTGAAAGAAGACATCCTGAGCAGTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CATTTTCAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCCACTGTCTACCTTGTTaGCTGAGTCTTCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: HFQKSIIHCTRFVQQSIIHCLPC*LSLLAF
Trigger: GAAAGCCAGAAGACTCAGCAAACAAGGTAGACAGTG...GATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTGAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATCATAAAAGTGACCACTTACTGTaGTGCGTTCTCATGTTATCC +
Preference number: 5 (lower is better)
Translates to: FLHLQKSAYAIKYSQDHKSDHLL*CVLMLS
Trigger: GGATAACATGAGAACGCACAACAGTAAGTGGTCACT...TTTATGATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTAACCACAACTAGTAGGTGGTCATaGGAGTGTGGCTACAGTTAT +
Preference number: 5 (lower is better)
Translates to: CRSVVIKDDLWKSQTVTTTSRWS*ECGYSY
Trigger: ATAACTGTAGCCACACTCCAATGACCACCTACTAGT...TGTGGTTACAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCCTCTCTGAACCCCAATaGTCTCTGATCTATAAAATG +
Preference number: 5 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFLSEPQ*SLIYKM
Trigger: CATTTTATAGATCAGAGACAATTGGGGTTCAGAGAG...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS TCA 90 bp TGTAAGAAGTATAATGGGGACACTTGCTTGCTCTCTTTGGGGACATaGAGAGAGGTATTGAGCAACTTTGTAAGTTTCCATTACGTGAAT +
Preference number: 5 (lower is better)
Translates to: CKKYNGDTCLLSLGT*REVLSNFVSFHYVN
Trigger: ATTCACGTAATGGAAACTTACAAAGTTGCTCAATACCTCTCTTCATGTCCCCAAAGAGAGCAAGCAAGTGTCCCCATTATACTTCTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395850.9
CDS-3UTR CAA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAATTGACGGCTGTTTaGCAGTCAGCAGTTGGGTTA +
Preference number: 5 (lower is better)
Translates to: QVAQANFILSQQDPFGKYQLTAV*QSAVGL
Trigger: TAACCCAACTGCTGACTGCAAAACAGCCGTCAATTG...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp GCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCAAGCCACTTGTAACCCAGCTTaGGTAATGAGACACGCATCA +
Preference number: 5 (lower is better)
Translates to: AQANFILSQQDPFGKYQATCNPA*VMRHAS
Trigger: TGATGCGTGTCTCATTACCAAAGCTGGGTTACAAGT...GGCTTGATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000437761.6
ENST00000445143.6
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TCCAAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAACCCAACAGGATCCATTaGGAAAATATCAAGCCTTTA +
Preference number: 5 (lower is better)
Translates to: SKDVLMMLTDYIQGARGKPNRIH*ENIKPL
Trigger: TAAAGGCTTGATATTTTCCAAATGGATCCTGTTGGG...TTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CATACCCCTGCAGATCTGTTGTTATTAAGGATGACCTTTGGAAGTCTCAAACTGTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: HTPADLLLLRMTFGSLKLSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...CAGTTTGAGACTTCCAAAGGTCATCCTTAATAACAACAGATCTGCAGGGGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATCGATTTTCAGCCACTaGTACCTCTCTAAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LYLSQVAQANFILSQQDPSIFSH*YLSKFS
Trigger: TGAAAACTTAGAGAGGTACAAGTGGCTGAAAATCGA...TGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000395850.9
ENST00000426650.7
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TTCCTCCATCTGCAAAAGTCAGCCTATGCCATTAAATACAGCCAAGATCATAAAACCCCTGCAGATCTGTaGTTATTAAGGATGACCTTT +
Preference number: 5 (lower is better)
Translates to: FLHLQKSAYAIKYSQDHKTPADL*LLRMTF
Trigger: AAAGGTCATCCTTAATAACAACAGATCTGCAGGGGT...TTTATGATCTTGGCTGTATTTAATGGCATAGGCTGACTTTTGCAGATGGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CTCTATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCAGATGTCTTCTTTCAGTaGCTACCATTAAGCATACTG +
Preference number: 5 (lower is better)
Translates to: LYLSQVAQANFILSQQDPDVFFQ*LPLSIL
Trigger: CAGTATGCTTAATGGTAGCAACTGAAAGAAGACATC...TGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGAGCAAAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTATTAGTTCAGATCTGTaGGCAGCAACAGAAACTAAT +
Preference number: 5 (lower is better)
Translates to: KSKGGSMQSSSSHTYFTLISSDL*AATETN
Trigger: ATTAGTTTCTGTTGCTGCCAACAGATCTGAACTAAT...AAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTTTGCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAGGAGGAAGCATGCAATCTAGTTCAAGTCACACCTACTTCACTCTTAGACTTCTCAAACTTCCAACACTaGTTATACACTTGTAACCCT +
Preference number: 5 (lower is better)
Translates to: KEEACNLVQVTPTSLLDFSNFQH*LYTCNP
Trigger: AGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGA...GAAGTCTAAGAGTGAAGTAGGTGTGACTTGAACTAGATTGCATGCTTCCTCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS TCA 90 bp AGGGTCATCTTACATCAGAAGCAAATTGCCTCCAGTTCCCTAGTTTaGAAAACAATTATTGCTCCCAGTCAATTCTTAAGACTCATCCTT +
Preference number: 5 (lower is better)
Translates to: RVILHQKQIASSSLV*KTIIAPSQFLRLIL
Trigger: AAGGATGAGTCTTAAGAATTGACTGGGAGCAATAATTGTTTTTCAAACTAGGGAACTGGAGGCAATTTGCTTCTGATGTAAGATGACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS GCA 90 bp TTGAATATCCATCTAACTGTGCAATTGAGAAGCTTCCTCCTAACCTaGAACTGGAAGGAGATTAGTCTGCAATGTAATGATGTGTTAAGA +
Preference number: 5 (lower is better)
Translates to: LNIHLTVQLRSFLLT*NWKEISLQCNDVLR
Trigger: TCTTAACACATCATTACATTGCAGACTAATCTCCTTCCAGTTGCAGGTTAGGAGGAAGCTTCTCAATTGCACAGTTAGATGGATATTCAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS-3UTR CAA 90 bp TATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGTGACGTCGTTGAAATaGCAATGCTCAAACTTCCAA +
Preference number: 5 (lower is better)
Translates to: YLSQVAQANFILSQQDPFVTSLK*QCSNFQ
Trigger: TTGGAAGTTTGAGCATTGCAATTTCAACGACGTCAC...AAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAAGAAAAGCATCATTCATaGCACTCGGTTTGTCCAACA +
Preference number: 5 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEEKHHS*HSVCPT
Trigger: TGTTGGACAAACCGAGTGCAATGAATGATGCTTTTC...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CATTTTCAGAAAAGCATCATTCATTGCACTCGGTTTGTCCAACAGAGTATAATCTTGCATAGTTTCCTCTaGTGTAAAGTGAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: HFQKSIIHCTRFVQQSIILHSFL*CKVRCK
Trigger: CTTGCACCTCACTTTACACAAGAGGAAACTATGCAA...GATTATACTCTGTTGGACAAACCGAGTGCAATGAATGATGCTTTTCTGAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp ATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGTCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: ILARLLKLILFFPNRIHLSILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...CAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATGAAAAGCATCATTCATaGCACTCGGTTTGTCCAACA +
Preference number: 5 (lower is better)
Translates to: QVAQANFILSQQDPFGKYEKHHS*HSVCPT
Trigger: TGTTGGACAAACCGAGTGCAATGAATGATGCTTTTC...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000395850.9
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TATCTTAGCCAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTCTCTCTGAACCCCAATaGTCTCTGATCTATAAAATG +
Preference number: 5 (lower is better)
Translates to: YLSQVAQANFILSQQDPFLSEPQ*SLIYKM
Trigger: CATTTTATAGATCAGAGACAATTGGGGTTCAGAGAG...AAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTGGCTAAGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp AAAGATGTACTAATGATGCTAACTGACTACATCCAAGGAGCCAGAGGAAAAATATCTATCTTAGCCAGGTaGCTCAAGCTAATTTTATTC +
Preference number: 5 (lower is better)
Translates to: KDVLMMLTDYIQGARGKISILAR*LKLILF
Trigger: GAATAAAATTAGCTTGAGCAACCTGGCTAAGATAGA...TATTTTTCCTCTGGCTCCTTGGATGTAGTCAGTTAGCATCATTAGTACATCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000651485.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS-3UTR CAA 90 bp TACAAAATCCACGGGTTTAACTGCTGCTCTCCTGAAATGAAATATCTACAAGAACATTCAAGACCAAGTTaGGCAAATAGATTAGCATCT +
Preference number: 5 (lower is better)
Translates to: YKIHGFNCCSPEMKYLQEHSRPS*ANRLAS
Trigger: AGATGCTAATCTATTTGCCAAACTTGGTCTTGAATG...TTCTTGTAGATATTTCATTTCAGGAGAGCAGCAGTTAAACCCGTGGATTTTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATGTTCACCTCATGCTATaGGGTAACTTTCCAGTAAAA +
Preference number: 5 (lower is better)
Translates to: QVAQANFILSQQDPFGKYVHLML*GNFPVK
Trigger: TTTTACTGGAAAGTTACCCAATAGCATGAGGTGAAC...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS-3UTR CAA 90 bp CAGGTTGCTCAAGCTAATTTTATTCTTTCCCAACAGGATCCATTTGGAAAATATCATTCAAGACCAAGTTaGGCAAATAGATTAGCATCT +
Preference number: 5 (lower is better)
Translates to: QVAQANFILSQQDPFGKYHSRPS*ANRLAS
Trigger: AGATGCTAATCTATTTGCCAAACTTGGTCTTGAATG...ATATTTTCCAAATGGATCCTGTTGGGAAAGAATAAAATTAGCTTGAGCAACCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642928.2
ENST00000651785.1
ENST00000652678.1
CDS GCA 72 bp GGCGCCCAAGATCCTCTTCCAGCCTCGAGCCGCTTCTaGGCTCAGCCCCCGCATTCTTTCGCTCCAGCCCGC +
Preference number: 6 (lower is better)
Translates to: GAQDPLPASSRF*AQPPHSFAPAR
Trigger: GCGGGCTGGAGCGAAAGAATGCGGGGGCTGAGCGCAGAAGCGGCTCGAGGCTGGAAGAGGATCTTGGGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351554.8
CDS CAA 90 bp GAAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACCTGGCGGCGCCCAAG +
Preference number: 6 (lower is better)
Translates to: EDSQDEQQPEQDRPS*DSHCDCPQNLAAPK
Trigger: CTTGGGCGCCGCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS CAA 90 bp GAAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACAGGGGGAGTCAAGGC +
Preference number: 6 (lower is better)
Translates to: EDSQDEQQPEQDRPS*DSHCDCPQNRGSQG
Trigger: GCCTTGACTCCCCCTGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437761.6
CDS TCA 72 bp GCCCGAACAGGACAGACCCTCCTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGCGGCGCCCAAGATCCT +
Preference number: 6 (lower is better)
Translates to: ARTGQTLLGFPL*LSTEPGGAQDP
Trigger: AGGATCTTGGGCGCCGCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS CCA 72 bp AGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACCTGGCGG +
Preference number: 6 (lower is better)
Translates to: RTSSSPNRTDPP*IPIVIVHRTWR
Trigger: CCGCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS CAA 72 bp CAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACCTGGCG +
Preference number: 6 (lower is better)
Translates to: QDEQQPEQDRPS*DSHCDCPQNLA
Trigger: CGCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426650.7
ENST00000533403.6
ENST00000642928.2
ENST00000652086.1
CDS CAA 72 bp CAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACAGGGGG +
Preference number: 6 (lower is better)
Translates to: QDEQQPEQDRPS*DSHCDCPQNRG
Trigger: CCCCCTGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437761.6
CDS CAA 90 bp GAAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACCTGGAAGCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: EDSQDEQQPEQDRPS*DSHCDCPQNLEALA
Trigger: AGCCAGAGCTTCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395850.9
ENST00000652678.1
CDS CAA 90 bp ATCCCTGGGCCATGCCCCAGCTCTGACCCACAGCACCATATACCCTaGAGTAGGCTCAGTCCCTATAAGCCCCAGTGTGTACTACCACAC +
Preference number: 6 (lower is better)
Translates to: IPGPCPSSDPQHHIP*SRLSPYKPQCVLPH
Trigger: GTGTGGTAGTACACACTGGGGCTTATAGGGACTGAGCCTACTCAAGGGTATATGGTGCTGTGGGTCAGAGCTGGGGCATGGCCCAGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415002.7
ENST00000437761.6
CDS CAA 90 bp GAAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACCTGGAAGGAAGGGAC +
Preference number: 6 (lower is better)
Translates to: EDSQDEQQPEQDRPS*DSHCDCPQNLEGRD
Trigger: GTCCCTTCCTTCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS CCA 72 bp AGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACAGGGGGA +
Preference number: 6 (lower is better)
Translates to: RTSSSPNRTDPP*IPIVIVHRTGG
Trigger: TCCCCCTGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437761.6
CDS TCA 72 bp CATGCCCCAGCTCTGACCCACAGCACCATATACCCTTaGGTAGGCTCAGTCCCTATAAGCCCCAGTGTGTAC +
Preference number: 6 (lower is better)
Translates to: HAPALTHSTIYP*VGSVPISPSVY
Trigger: GTACACACTGGGGCTTATAGGGACTGAGCCTACTCAAGGGTATATGGTGCTGTGGGTCAGAGCTGGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415002.7
ENST00000437761.6
CDS TCA 72 bp GCCCGAACAGGACAGACCCTCCTTGGATTCCCATTGTaGTTGTCCACAGAACAGGGGGAGTCAAGGCACACT +
Preference number: 6 (lower is better)
Translates to: ARTGQTLLGFPL*LSTEQGESRHT
Trigger: AGTGTGCCTTGACTCCCCCTGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437761.6
CDS TCA 72 bp GCCCGAACAGGACAGACCCTCCTTGGATTCCCATTGTaGTTGTCCACAGAACCCTTGAGTAGGCTCAGTCCC +
Preference number: 6 (lower is better)
Translates to: ARTGQTLLGFPL*LSTEPLSRLSP
Trigger: GGGACTGAGCCTACTCAAGGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445143.6
CDS CCA 72 bp AGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACCTGGAAG +
Preference number: 6 (lower is better)
Translates to: RTSSSPNRTDPP*IPIVIVHRTWK
Trigger: CTTCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000652678.1
CDS CCA 72 bp AGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACCCTTGAG +
Preference number: 6 (lower is better)
Translates to: RTSSSPNRTDPP*IPIVIVHRTLE
Trigger: CTCAAGGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445143.6
CDS CAA 72 bp CAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACCTGGAA +
Preference number: 6 (lower is better)
Translates to: QDEQQPEQDRPS*DSHCDCPQNLE
Trigger: TTCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395850.9
ENST00000415002.7
ENST00000652678.1
CDS CAA 72 bp CCATGCCCCAGCTCTGACCCACAGCACCATATACCCTaGAGTAGGCTCAGTCCCTATAAGCCCCAGTGTGTA +
Preference number: 6 (lower is better)
Translates to: PCPSSDPQHHIP*SRLSPYKPQCV
Trigger: TACACACTGGGGCTTATAGGGACTGAGCCTACTCAAGGGTATATGGTGCTGTGGGTCAGAGCTGGGGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000415002.7
ENST00000437761.6
CDS TCA 72 bp GCCCGAACAGGACAGACCCTCCTTGGATTCCCATTGTaGTTGTCCACAGAACCTGGAAGGAAGGGACAGGAA +
Preference number: 6 (lower is better)
Translates to: ARTGQTLLGFPL*LSTEPGRKGQE
Trigger: TTCCTGTCCCTTCCTTCCAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415002.7
CDS CCA 72 bp AGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACTACTGTG +
Preference number: 6 (lower is better)
Translates to: RTSSSPNRTDPP*IPIVIVHRTTV
Trigger: CACAGTAGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351554.8
ENST00000528700.2
ENST00000643183.1
ENST00000651785.1
CDS CAA 72 bp CAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACTACTGT +
Preference number: 6 (lower is better)
Translates to: QDEQQPEQDRPS*DSHCDCPQNYC
Trigger: ACAGTAGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351554.8
ENST00000528700.2
ENST00000643183.1
ENST00000651785.1
CDS CAA 90 bp GAAGACAGCCAGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTaGGATTCCCATTGTGATTGTCCACAGAACTACTGTGAAGTAGGT +
Preference number: 6 (lower is better)
Translates to: EDSQDEQQPEQDRPS*DSHCDCPQNYCEVG
Trigger: ACCTACTTCACAGTAGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCTGGCTGTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351554.8
ENST00000528700.2
ENST00000643183.1
ENST00000651785.1
CDS CCA 72 bp AGGACGAGCAGCAGCCCGAACAGGACAGACCCTCCTTaGATTCCCATTGTGATTGTCCACAGAACCTGTAAT +
Preference number: 6 (lower is better)
Translates to: RTSSSPNRTDPP*IPIVIVHRTCN
Trigger: ATTACAGGTTCTGTGGACAATCACAATGGGAATCCAAGGAGGGTCTGTCCTGTTCGGGCTGCTGCTCGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527577.5
CDS TCA 72 bp GAAAGTCCAGTGGAAGCAAGGTGGGTCCTCACTTTCTaGGCACACACAGGAACCCAGTTCTCTAGAGCATCT +
Preference number: 6 (lower is better)
Translates to: ESPVEARWVLTF*AHTGTQFSRAS
Trigger: AGATGCTCTAGAGAACTGGGTTCCTGTGTGTGCTCAGAAAGTGAGGACCCACCTTGCTTCCACTGGACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS CCA 72 bp GACTTGTCCCCTGGCAGCCCACCATCTCCATTAATATaGGCCCAAAGTCAGCAACTTGTGGTATACTTCCAC +
Preference number: 6 (lower is better)
Translates to: DLSPGSPPSPLI*AQSQQLVVYFH
Trigger: GTGGAAGTATACCACAAGTTGCTGACTTTGGGCCCATATTAATGGAGATGGTGGGCTGCCAGGGGACAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS TCA 72 bp ACTTGTAACCCTCCTACGTGTCCTTTGAGCTCAGCTTaGGTCTCCTCAGGACTCAGCTTTGGTAATGAGACA +
Preference number: 6 (lower is better)
Translates to: TCNPPTCPLSSA*VSSGLSFGNET
Trigger: TGTCTCATTACCAAAGCTGAGTCCTGAGGAGACTCAAGCTGAGCTCAAAGGACACGTAGGAGGGTTACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS TCA 72 bp AGGGTATCATTACTGAACTACCCCCTTCTAAGGGACTaGCCGAATGCCAGGAGTACACACTGTCAAAGACAA +
Preference number: 6 (lower is better)
Translates to: RVSLLNYPLLRD*PNARSTHCQRQ
Trigger: TTGTCTTTGACAGTGTGTACTCCTGGCATTCGGTCAGTCCCTTAGAAGGGGGTAGTTCAGTAATGATACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS TCA 72 bp AATCAGGAAGAAAGTCAGGATCTCTTAAAGCAGCACTaGCTTGTCCCCTGGCAGCCCACCATCTCCATTAAT +
Preference number: 6 (lower is better)
Translates to: NQEESQDLLKQH*LVPWQPTISIN
Trigger: ATTAATGGAGATGGTGGGCTGCCAGGGGACAAGTCAGTGCTGCTTTAAGAGATCCTGACTTTCTTCCTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS TCA 72 bp ACTTGTTATACACTTGTAACCCTCCTACGTGTCCTTTaGGCTCAGCTTGAGTCTCCTCAGGACTCAGCTTTG +
Preference number: 6 (lower is better)
Translates to: TCYTLVTLLRVL*AQLESPQDSAL
Trigger: CAAAGCTGAGTCCTGAGGAGACTCAAGCTGAGCTCAAAGGACACGTAGGAGGGTTACAAGTGTATAACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651485.1
CDS GCA 72 bp ATTACTGAACTACCCCCTTCTAAGGGACTGACCGAATaGCAGGAGTACACACTGTCAAAGACAAGACAACAG +
Preference number: 6 (lower is better)
Translates to: ITELPPSKGLTE*QEYTLSKTRQQ
Trigger: CTGTTGTCTTGTCTTTGACAGTGTGTACTCCTGGCATTCGGTCAGTCCCTTAGAAGGGGGTAGTTCAGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS CAA 72 bp TTGGTAATGAGACACGCATCAAAATCAGATGAACAATaGACGGCTGTTTTGCAGTCAGCAGTTGGGTTAGGA +
Preference number: 6 (lower is better)
Translates to: LVMRHASKSDEQ*TAVLQSAVGLG
Trigger: TCCTAACCCAACTGCTGACTGCAAAACAGCCGTCAATTGTTCATCTGATTTTGATGCGTGTCTCATTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000351554.8
ENST00000395850.9
ENST00000415002.7
ENST00000426650.7
ENST00000437761.6
ENST00000445143.6
ENST00000527577.5
ENST00000528700.2
ENST00000528987.1
ENST00000533403.6
ENST00000642928.2
ENST00000643183.1
ENST00000651785.1
ENST00000652086.1
ENST00000652678.1
CDS TCA 72 bp TATAATGGGGACACTTGCTTGCTCTCTTTGGGGACATaGAGAGAGGTATTGAGCAACTTTGTAAGTTTCCAT +
Preference number: 6 (lower is better)
Translates to: YNGDTCLLSLGT*REVLSNFVSFH
Trigger: ATGGAAACTTACAAAGTTGCTCAATACCTCTCTTCATGTCCCCAAAGAGAGCAAGCAAGTGTCCCCATTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395850.9
CDS CAA 72 bp TTGTTATACACTTGTAACCCCAATTCCATGCAGAGCTaGGAACACAACACTTCTCAGTTTATAACTGCAGGC +
Preference number: 6 (lower is better)
Translates to: LLYTCNPNSMQS*EHNTSQFITAG
Trigger: GCCTGCAGTTATAAACTGAGAAGTGTTGTGTTCCAAGCTCTGCATGGAATTGGGGTTACAAGTGTATAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426650.7
CDS CAA 72 bp ACGTCGTTGAAATTGCAATGCTCAAACTTCCAACACTaGTTATACACTTGTAACCCCAATTCCATGCAGAGC +
Preference number: 6 (lower is better)
Translates to: TSLKLQCSNFQH*LYTCNPNSMQS
Trigger: GCTCTGCATGGAATTGGGGTTACAAGTGTATAACAAGTGTTGGAAGTTTGAGCATTGCAATTTCAACGACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426650.7
CDS CAA 90 bp GAGGGTCATCTTACATCAGAAGCAAATTGCCTCCAGTTCCCTAGTTaGAAAAACAATTATTGCTCCCAGTCAATTCTTAAGACTCATCCT +
Preference number: 6 (lower is better)
Translates to: EGHLTSEANCLQFPS*KNNYCSQSILKTHP
Trigger: AGGATGAGTCTTAAGAATTGACTGGGAGCAATAATTGTTTTTCAAACTAGGGAACTGGAGGCAATTTGCTTCTGATGTAAGATGACCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS CCA 72 bp GAAGCAAGAGTTGGAAGGAAATCTTCCTGGTTTGTATaGATACCCCCTTTTCCATCATCAGAGATAAACTAT +
Preference number: 6 (lower is better)
Translates to: EARVGRKSSWFV*IPPFPSSEINY
Trigger: ATAGTTTATCTCTGATGATGGAAAAGGGGGTATCCATACAAACCAGGAAGATTTCCTTCCAACTCTTGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS CAA 72 bp AAATATCCACATTTGAATATCCATCTAACTGTGCAATaGAGAAGCTTCCTCCTAACCTGCAACTGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: KYPHLNIHLTVQ*RSFLLTCNWKE
Trigger: CTCCTTCCAGTTGCAGGTTAGGAGGAAGCTTCTCAATTGCACAGTTAGATGGATATTCAAATGTGGATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS CAA 72 bp TGGACCCTGATGCAAGCACAAAGGAAATATCCACATTaGAATATCCATCTAACTGTGCAATTGAGAAGCTTC +
Preference number: 6 (lower is better)
Translates to: WTLMQAQRKYPH*NIHLTVQLRSF
Trigger: GAAGCTTCTCAATTGCACAGTTAGATGGATATTCAAATGTGGATATTTCCTTTGTGCTTGCATCAGGGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528987.1
CDS CAA 72 bp CTTTCCAAATTCAAACTACAGTTCCAGCAACATTTTTaGGACCCTGATGCAAGCACAAAGGAAATATCCACA +
Preference number: 6 (lower is better)
Translates to: LSKFKLQFQQHF*DPDASTKEIST
Trigger: TGTGGATATTTCCTTTGTGCTTGCATCAGGGTCCAAAAAATGTTGCTGGAACTGTAGTTTGAATTTGGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528987.1